View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2312_high_40 (Length: 348)
Name: NF2312_high_40
Description: NF2312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2312_high_40 |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 10656901 - 10657231
Alignment:
| Q |
1 |
ttttgcaaaccaaacgcacatgtgtggtattctcgtatagttttattattactaattaaacaccagtatgtgggtaaaaagttaagactttgatttttga |
100 |
Q |
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| T |
10656901 |
ttttgcaaaccaaacgcacttatgtggtattctcgtatagttttattattactaattaaacaccaacatgtgggtaaaaatttaagactttgatttttga |
10657000 |
T |
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| Q |
101 |
attatgtgattcgagctagagattcaatcagagttgtttgtaaaatttaatctgagttgagtatagacttagaaaaatgtttgtctcaaatacgagttaa |
200 |
Q |
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| T |
10657001 |
attatgtgtctcgagctagagattcgatcagagttgtttgtaaaatttaatttgagttgagtatagacttagacaaatgtttgtctcaaatacgagttga |
10657100 |
T |
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| Q |
201 |
attttgagccgaataaaattttatcgataaaatcttatcgagccaagctcaactttaaaatgaaagttgagttaaaattgctagaaaaatatcgaattag |
300 |
Q |
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| T |
10657101 |
attttgagtcgaataaaattttatcgataaaatcttatcgagccaagctcaactttaaaatgaatgttgagttaaaattgctagaaaaatattgaattag |
10657200 |
T |
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| Q |
301 |
gtacacaaaattaaagacaaaataaaaatga |
331 |
Q |
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| T |
10657201 |
gtacacaaaattaaagacaaaataaaaatga |
10657231 |
T |
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