View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2312_high_55 (Length: 279)

Name: NF2312_high_55
Description: NF2312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2312_high_55
NF2312_high_55
[»] chr8 (36 HSPs)
chr8 (3-267)||(8879672-8879931)
chr8 (7-266)||(36565477-36565737)
chr8 (7-267)||(39946642-39946903)
chr8 (7-264)||(42854240-42854498)
chr8 (16-260)||(36395195-36395443)
chr8 (7-266)||(18124962-18125219)
chr8 (7-265)||(2796342-2796603)
chr8 (7-266)||(36544938-36545195)
chr8 (39-266)||(25288688-25288916)
chr8 (39-266)||(25300023-25300251)
chr8 (70-266)||(37077551-37077748)
chr8 (57-264)||(15215557-15215765)
chr8 (7-241)||(18752112-18752344)
chr8 (43-264)||(12492116-12492336)
chr8 (7-151)||(40813224-40813370)
chr8 (11-156)||(13986391-13986536)
chr8 (198-266)||(4032922-4032990)
chr8 (10-135)||(45419157-45419280)
chr8 (17-193)||(13171895-13172072)
chr8 (26-87)||(11523979-11524040)
chr8 (198-265)||(25439323-25439390)
chr8 (16-142)||(2518637-2518761)
chr8 (31-106)||(21121105-21121180)
chr8 (19-149)||(6510676-6510803)
chr8 (7-81)||(8932676-8932748)
chr8 (12-106)||(32043537-32043631)
chr8 (1-84)||(12796930-12797011)
chr8 (32-131)||(16351312-16351411)
chr8 (32-130)||(29520583-29520681)
chr8 (7-48)||(12491374-12491415)
chr8 (17-106)||(44681285-44681374)
chr8 (30-101)||(5908594-5908665)
chr8 (12-106)||(25985468-25985560)
chr8 (60-126)||(25439394-25439460)
chr8 (16-89)||(30113442-30113515)
chr8 (57-105)||(10080191-10080239)
[»] chr4 (49 HSPs)
chr4 (7-263)||(31960050-31960307)
chr4 (3-266)||(436015-436279)
chr4 (8-266)||(33226995-33227254)
chr4 (3-266)||(48174325-48174589)
chr4 (7-266)||(46583060-46583320)
chr4 (7-266)||(23906531-23906797)
chr4 (7-266)||(43433704-43433970)
chr4 (7-266)||(56375076-56375336)
chr4 (7-264)||(27450415-27450667)
chr4 (7-263)||(53707583-53707840)
chr4 (7-266)||(1777253-1777511)
chr4 (7-264)||(50286759-50287008)
chr4 (7-247)||(52569751-52569992)
chr4 (17-263)||(1211638-1211883)
chr4 (3-267)||(47265434-47265702)
chr4 (7-226)||(4440682-4440899)
chr4 (7-266)||(48622779-48623023)
chr4 (9-184)||(12494618-12494794)
chr4 (7-266)||(41009585-41009846)
chr4 (8-183)||(33191085-33191261)
chr4 (7-266)||(16002714-16002973)
chr4 (31-265)||(35690091-35690326)
chr4 (116-262)||(39708248-39708395)
chr4 (12-193)||(45205088-45205271)
chr4 (7-186)||(39100771-39100949)
chr4 (7-193)||(1793319-1793506)
chr4 (26-145)||(27983108-27983227)
chr4 (7-151)||(28236087-28236229)
chr4 (10-193)||(31458887-31459073)
chr4 (7-144)||(37773687-37773823)
chr4 (7-107)||(37797798-37797898)
chr4 (70-238)||(55578845-55579014)
chr4 (31-231)||(7092480-7092680)
chr4 (124-192)||(26037835-26037904)
chr4 (11-131)||(54470129-54470249)
chr4 (7-150)||(20601882-20602025)
chr4 (7-65)||(26037741-26037799)
chr4 (199-265)||(54914618-54914684)
chr4 (17-78)||(20591546-20591607)
chr4 (61-156)||(20105761-20105856)
chr4 (75-193)||(38904023-38904142)
chr4 (21-89)||(44047598-44047666)
chr4 (60-103)||(51421682-51421725)
chr4 (92-217)||(11389555-11389681)
chr4 (30-103)||(51252720-51252791)
chr4 (10-103)||(49987378-49987471)
chr4 (13-145)||(17900388-17900520)
chr4 (10-46)||(26356626-26356662)
chr4 (30-98)||(38571006-38571074)
[»] scaffold0024 (1 HSPs)
scaffold0024 (3-264)||(82509-82771)
[»] chr7 (45 HSPs)
chr7 (7-262)||(34869210-34869466)
chr7 (7-262)||(43281466-43281720)
chr7 (7-266)||(31005009-31005269)
chr7 (7-266)||(35906437-35906697)
chr7 (7-267)||(38606790-38607050)
chr7 (7-264)||(33350042-33350300)
chr7 (3-264)||(33072742-33073002)
chr7 (7-266)||(12841511-12841771)
chr7 (3-263)||(39906602-39906868)
chr7 (17-266)||(11593746-11593996)
chr7 (11-264)||(32630383-32630636)
chr7 (7-266)||(36651780-36652038)
chr7 (7-266)||(49029067-49029322)
chr7 (7-266)||(46356092-46356347)
chr7 (9-266)||(23404204-23404462)
chr7 (7-266)||(7272825-7273085)
chr7 (7-240)||(13859244-13859476)
chr7 (57-262)||(36869575-36869781)
chr7 (7-156)||(45836716-45836865)
chr7 (7-185)||(37617811-37617991)
chr7 (7-142)||(44855408-44855543)
chr7 (3-150)||(35559225-35559373)
chr7 (178-264)||(37616704-37616790)
chr7 (7-88)||(6374833-6374914)
chr7 (7-88)||(29650349-29650430)
chr7 (10-106)||(36136711-36136807)
chr7 (7-151)||(43491210-43491354)
chr7 (56-266)||(7189519-7189728)
chr7 (7-89)||(46014416-46014498)
chr7 (10-142)||(36514446-36514576)
chr7 (31-137)||(39811873-39811979)
chr7 (10-202)||(47848524-47848717)
chr7 (209-266)||(48919174-48919231)
chr7 (7-67)||(2885958-2886018)
chr7 (116-235)||(25579416-25579536)
chr7 (10-106)||(48736138-48736234)
chr7 (16-107)||(8492478-8492569)
chr7 (7-48)||(22349625-22349666)
chr7 (118-193)||(15681216-15681292)
chr7 (7-54)||(36869480-36869527)
chr7 (20-137)||(19262682-19262797)
chr7 (56-105)||(25731638-25731687)
chr7 (57-142)||(27021992-27022077)
chr7 (7-48)||(31682838-31682879)
chr7 (29-133)||(43282325-43282432)
[»] chr1 (36 HSPs)
chr1 (7-266)||(1210531-1210791)
chr1 (7-252)||(696069-696315)
chr1 (7-265)||(9592521-9592780)
chr1 (7-256)||(51441001-51441251)
chr1 (7-258)||(15085728-15085980)
chr1 (7-266)||(30202366-30202626)
chr1 (7-266)||(32082981-32083241)
chr1 (7-266)||(49347629-49347889)
chr1 (7-266)||(8671706-8671964)
chr1 (7-263)||(22089883-22090142)
chr1 (16-266)||(8391556-8391809)
chr1 (8-266)||(43240616-43240877)
chr1 (7-266)||(51601844-51602102)
chr1 (7-190)||(34792585-34792768)
chr1 (7-156)||(32231190-32231339)
chr1 (7-137)||(4001691-4001821)
chr1 (10-264)||(9599633-9599888)
chr1 (30-237)||(37463132-37463334)
chr1 (1-193)||(38807901-38808093)
chr1 (30-256)||(39140310-39140543)
chr1 (16-237)||(18469327-18469547)
chr1 (10-142)||(9509229-9509361)
chr1 (70-264)||(19936310-19936505)
chr1 (72-264)||(34827403-34827596)
chr1 (10-107)||(52561850-52561947)
chr1 (207-264)||(27445686-27445743)
chr1 (160-253)||(41560235-41560328)
chr1 (92-264)||(46226603-46226776)
chr1 (168-264)||(52831846-52831942)
chr1 (17-107)||(27848051-27848140)
chr1 (15-151)||(39894686-39894820)
chr1 (92-176)||(26016313-26016398)
chr1 (30-101)||(43423671-43423742)
chr1 (122-267)||(11331415-11331561)
chr1 (122-267)||(11489436-11489582)
chr1 (70-131)||(12262000-12262060)
[»] chr6 (25 HSPs)
chr6 (7-266)||(9706562-9706822)
chr6 (7-265)||(20427872-20428131)
chr6 (7-264)||(10100095-10100351)
chr6 (7-266)||(607945-608203)
chr6 (7-265)||(5631605-5631868)
chr6 (7-264)||(5258384-5258644)
chr6 (11-266)||(14030592-14030849)
chr6 (6-224)||(30031084-30031303)
chr6 (7-232)||(28085196-28085422)
chr6 (70-261)||(2689447-2689639)
chr6 (37-253)||(2065018-2065239)
chr6 (8-186)||(35043678-35043857)
chr6 (31-264)||(6056032-6056264)
chr6 (7-139)||(32755833-32755967)
chr6 (20-142)||(5080766-5080888)
chr6 (182-266)||(30679260-30679344)
chr6 (57-137)||(9593998-9594078)
chr6 (3-111)||(21352069-21352175)
chr6 (11-81)||(12890556-12890626)
chr6 (59-213)||(33496023-33496178)
chr6 (16-193)||(28027071-28027248)
chr6 (10-145)||(33083966-33084101)
chr6 (3-42)||(30679417-30679456)
chr6 (3-47)||(2689646-2689690)
chr6 (231-263)||(33495986-33496018)
[»] chr5 (26 HSPs)
chr5 (7-266)||(3301635-3301890)
chr5 (7-266)||(12492620-12492883)
chr5 (7-266)||(1275051-1275310)
chr5 (7-266)||(2075710-2075970)
chr5 (6-267)||(10639082-10639351)
chr5 (7-265)||(28977095-28977352)
chr5 (7-260)||(16347614-16347868)
chr5 (7-264)||(1287815-1288083)
chr5 (7-266)||(34272808-34273073)
chr5 (7-264)||(24178312-24178556)
chr5 (50-266)||(20318777-20318985)
chr5 (30-253)||(27693-27916)
chr5 (7-127)||(4496308-4496430)
chr5 (7-88)||(38684932-38685013)
chr5 (178-266)||(3394496-3394587)
chr5 (10-107)||(26884927-26885025)
chr5 (7-105)||(14665658-14665760)
chr5 (16-101)||(15168744-15168829)
chr5 (11-142)||(10082979-10083109)
chr5 (7-90)||(14749270-14749353)
chr5 (10-175)||(31636159-31636319)
chr5 (7-48)||(20456778-20456819)
chr5 (10-136)||(11002662-11002786)
chr5 (10-65)||(14667751-14667806)
chr5 (59-131)||(28186956-28187028)
chr5 (71-151)||(36200684-36200764)
[»] chr3 (38 HSPs)
chr3 (7-266)||(52138586-52138846)
chr3 (7-263)||(28245226-28245483)
chr3 (8-265)||(51447947-51448204)
chr3 (7-266)||(5168614-5168878)
chr3 (7-266)||(25191165-25191423)
chr3 (9-222)||(54278850-54279064)
chr3 (57-266)||(38849880-38850090)
chr3 (7-266)||(53519372-53519638)
chr3 (7-192)||(33272258-33272450)
chr3 (92-266)||(47542033-47542207)
chr3 (7-149)||(47233832-47233974)
chr3 (20-177)||(45728020-45728180)
chr3 (7-134)||(21992-22118)
chr3 (7-264)||(27917360-27917616)
chr3 (10-151)||(54128280-54128421)
chr3 (18-235)||(43695012-43695230)
chr3 (10-149)||(49503793-49503937)
chr3 (10-249)||(26490119-26490358)
chr3 (3-253)||(3186568-3186818)
chr3 (70-193)||(48953695-48953818)
chr3 (11-176)||(344951-345117)
chr3 (30-263)||(29817293-29817527)
chr3 (11-68)||(35033131-35033188)
chr3 (58-142)||(50621647-50621731)
chr3 (7-65)||(38060419-38060477)
chr3 (170-263)||(40674513-40674606)
chr3 (16-107)||(19736942-19737034)
chr3 (16-107)||(19757845-19757937)
chr3 (3-46)||(48953654-48953697)
chr3 (117-266)||(30345313-30345459)
chr3 (7-48)||(38850125-38850166)
chr3 (59-156)||(45236753-45236850)
chr3 (57-142)||(46568027-46568112)
chr3 (30-106)||(39600940-39601016)
chr3 (57-128)||(19676376-19676447)
chr3 (213-264)||(54425349-54425400)
chr3 (1-106)||(36820191-36820294)
chr3 (60-132)||(2341003-2341075)
[»] chr2 (32 HSPs)
chr2 (7-262)||(8180570-8180826)
chr2 (7-266)||(41197464-41197724)
chr2 (7-263)||(3865861-3866118)
chr2 (7-266)||(11992344-11992602)
chr2 (10-266)||(41763281-41763537)
chr2 (7-266)||(45367861-45368120)
chr2 (17-239)||(36183264-36183487)
chr2 (7-229)||(38429707-38429930)
chr2 (57-266)||(2610314-2610524)
chr2 (7-266)||(23997403-23997660)
chr2 (7-266)||(3243889-3244147)
chr2 (79-266)||(451930-452118)
chr2 (20-266)||(4807378-4807629)
chr2 (7-256)||(12734502-12734745)
chr2 (3-256)||(16097218-16097480)
chr2 (7-264)||(30743411-30743668)
chr2 (70-264)||(6238053-6238247)
chr2 (70-264)||(24583905-24584100)
chr2 (7-139)||(38452921-38453057)
chr2 (12-138)||(38434866-38434992)
chr2 (208-264)||(38453058-38453114)
chr2 (7-82)||(25834650-25834727)
chr2 (7-107)||(18424613-18424711)
chr2 (7-65)||(2610576-2610634)
chr2 (57-151)||(7825260-7825354)
chr2 (3-68)||(43752179-43752244)
chr2 (7-55)||(43238329-43238377)
chr2 (117-192)||(1456095-1456169)
chr2 (57-253)||(13149112-13149309)
chr2 (57-138)||(40759014-40759095)
chr2 (16-68)||(227307-227359)
chr2 (140-233)||(32443434-32443527)
[»] scaffold0018 (1 HSPs)
scaffold0018 (7-264)||(31256-31514)
[»] scaffold0113 (1 HSPs)
scaffold0113 (3-264)||(11828-12092)
[»] scaffold0570 (2 HSPs)
scaffold0570 (95-266)||(2594-2766)
scaffold0570 (7-89)||(1184-1264)
[»] scaffold0157 (1 HSPs)
scaffold0157 (9-184)||(25683-25859)
[»] scaffold0045 (1 HSPs)
scaffold0045 (57-262)||(86893-87101)
[»] scaffold0036 (1 HSPs)
scaffold0036 (8-184)||(4508-4686)
[»] scaffold1493 (1 HSPs)
scaffold1493 (214-266)||(29-81)


Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 3 - 267
Target Start/End: Original strand, 8879672 - 8879931
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  8879672 aaatcatctaagtctattttctaccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctagtccagtctta 8879771  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||      ||||||||||||||||||    
T  8879772 ccacttatcaagtgcaacattctcatctccgctacacttacttgattcttgtgctggctcttcaccgcccaacaca------catacaacatagtaggtc 8879865  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacaccta 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8879866 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacaccta 8879931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 36565477 - 36565737
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  36565477 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccac 36565576  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgt-gtggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  ||| |||||||||||| |||||||||||||||||||  |  || ||||| |||||||||||| |||||||||||||||  |  ||||||||    
T  36565577 tcatccaacgcatcatcctcatctctgctacacttacttgattctcatattgactcttaaccgcccaacactccgtaccatacaacaacgccggtctgac 36565676  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36565677 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 36565737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 7 - 267
Target Start/End: Complemental strand, 39946903 - 39946642
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| ||| ||| |||| ||||||||| ||||||||||  |||||||||||||||    
T  39946903 catctaagcctattttctaccaacttttctactataggtgctacccccactctttctataatggtgtcattcataatcctatcatgtctagtcttaccac 39946804  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| ||||||||||||||||||| ||| || ||||| |||||||||||  |||||||||||||||| |  || |||||    
T  39946803 tcatccaacgcaacatcctcatctctgctacacttacttgattctcgtgttgactcttaaccgcccaacattccgtaccatacaacatcgccggcctgac 39946704  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacaccta 267  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  39946703 tgctgtccgatagaactttcctttcaatttaagtggtactttcttatcgcacaaaacaccta 39946642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 42854240 - 42854498
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||| ||| ||||||||| | |||||| ||||||||| || |||||||||||||||||||   |||||||||||||||    
T  42854240 catctaagcctattttctaccaacttctctgctataggtgttacccccactctctctctgatggtgtcattcctaatcctattctgtctagtcttaccac 42854339  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    ||||| || |||||||| |||||||||||||||| |||| | ||| |||| ||||||| |||||||||||| |||||||||||||||| || ||||||||    
T  42854340 ttatccagcgcaacatcgtcatctccgctacactaactttactctcgtgttggctcttaaccgcccaacactccgtaccatacaacattgtcggtctgac 42854439  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  42854440 tgctgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacac 42854498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 16 - 260
Target Start/End: Original strand, 36395195 - 36395443
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagt 115  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||| ||| |      
T  36395195 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaac 36395294  T
Q  116 gcaacatcctcatctccgct---acacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgt 211  Q
    |||||||||||||||| |||   ||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  |||| |||||||||    
T  36395295 gcaacatcctcatctctgctacaacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggactgctgt 36395394  T
Q  212 ccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaa 260  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36395395 ccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaa 36395443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 18125219 - 18124962
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| |||||||| |||||||||||  |||| |||||  |||    
T  18125219 catctaagcctattttctaccaacttttctactataggtgctaccccca--ctctctctaatggtgtcatttctaatcctatcatgtctcgtcttgtcac 18125122  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || ||||||| ||||||||||||||||||||||||||||  ||| ||||||| |||||||||||| |||||||||||||||| || ||||||||    
T  18125121 tcatccagcgcaacatgctcatctccgctacacttacttgattctcatgttggctcttaaccgcccaacactccgtaccatacaacattgttggtctgac 18125022  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || |||||||||||||||| |||||||| ||||||||||||||||||| || |||||||||    
T  18125021 tgttgtccgatagaactttcctttcaac-taagtggtactttcttatcacataaaacacct 18124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 265
Target Start/End: Complemental strand, 2796603 - 2796342
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtc--tagtcttacc 104  Q
    |||||||| ||||||||| ||||||||||||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||  |||  ||||||||||    
T  2796603 catctaagcctattttctaccaacttttctactataggcgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctatagtcttacc 2796504  T
Q  105 acttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctg 203  Q
    ||| ||| || |||||||||||||||  ||||||||||||||||||| ||| || ||||| ||| ||||| || | |||||||| ||||  || |||||     
T  2796503 actcatccagcgcaacatcctcatctttgctacacttacttgattctcgtgttgactcttaaccacccaagactcggtaccatataacaacgtcggtcta 2796404  T
Q  204 actgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacc 265  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  2796403 actgttgtccaatataactttcctttcaacttaagtggtactttcttatcgcacagaacacc 2796342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 36545195 - 36544938
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct--aattgtgtcattcctaatcctatctggtctagtcttacc 104  Q
    |||||||| ||||||||| ||||||||||||||||||||| | |||||| |||||||||  ||| ||||||||||||||||||||  |||||||||||||    
T  36545195 catctaagcctattttctaccaacttttctactataggtgttacccccactctctctctctaatggtgtcattcctaatcctatcatgtctagtcttacc 36545096  T
Q  105 acttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctg 203  Q
    ||| ||| |   ||||||||||||||| |||||||||||||||||||  || || ||||| ||| |||||||| | |||||||||||||  |     |||    
T  36545095 actcatccaacacaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccacccaacactcggtaccatacaacaacg-----ctg 36545001  T
Q  204 actgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
      |||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  36545000 gttgctatccgatagaactttcttttcaacttaagtggtactttcttatcgcacaaaacacct 36544938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 39 - 266
Target Start/End: Complemental strand, 25288916 - 25288688
Alignment:
Q  39 tataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctaca 138  Q
    |||||||||| ||||||  ||||||||||| ||||| |||||||||||||||  ||||||||||||||| ||| ||  |||||||||||| || ||||||    
T  25288916 tataggtgctacccccacactctctctaatggtgtccttcctaatcctatctcatctagtcttaccactaatccagctcaacatcctcatatctgctaca 25288817  T
Q  139 cttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaa 237  Q
    |||| |||||||| ||| |||||||| |||||||||||| ||||| |||||||||| |  ||||  |||| |||  ||||||||||| ||||||||||||    
T  25288816 cttatttgattctcgtgttggctcttaaccgcccaacactccgtagcatacaacatcgccggtcgaactgttgtgtgatagaactttcctttcaacttaa 25288717  T
Q  238 gtggtactttcttatcgcacaaaacacct 266  Q
     ||||||||||||||||||||||||||||    
T  25288716 ttggtactttcttatcgcacaaaacacct 25288688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 39 - 266
Target Start/End: Complemental strand, 25300251 - 25300023
Alignment:
Q  39 tataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctaca 138  Q
    |||||||||| ||||||  ||||||||||| ||||| |||||||||||||||  ||||||||||||||| ||| ||  |||||||||||| || ||||||    
T  25300251 tataggtgctacccccacactctctctaatggtgtccttcctaatcctatctcatctagtcttaccactaatccagctcaacatcctcatatctgctaca 25300152  T
Q  139 cttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaa 237  Q
    |||| |||||||| ||| |||||||| |||||||||||| ||||| |||||||||| |  ||||  |||| |||  ||||||||||| ||||||||||||    
T  25300151 cttatttgattctcgtgttggctcttaaccgcccaacactccgtagcatacaacatcgccggtcgaactgttgtgtgatagaactttcctttcaacttaa 25300052  T
Q  238 gtggtactttcttatcgcacaaaacacct 266  Q
     ||||||||||||||||||||||||||||    
T  25300051 ttggtactttcttatcgcacaaaacacct 25300023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 266
Target Start/End: Complemental strand, 37077748 - 37077551
Alignment:
Q  70 gtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccg 168  Q
    ||||||||||||||||||||| ||||||| |||||||| ||| || ||||||||||||||||||| |||||||||||||||| ||| |||||||| || |    
T  37077748 gtgtcattcctaatcctatctcgtctagttttaccactcatccagcgcaacatcctcatctccgccacacttacttgattctcgtgttggctcttaactg 37077649  T
Q  169 cccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||| |||||||||||| ||| |  |||||||||| |||| || | |||||  ||||||||||||||||||||| |||||| ||||||||||||    
T  37077648 cccaacactccgtaccatacagcatcgacggtctgactgttgtctgacataacttccctttcaacttaagtggtacttacttatcacacaaaacacct 37077551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 57 - 264
Target Start/End: Original strand, 15215557 - 15215765
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    |||||||||||| |||||||| |||||||||||  || ||||||||||||| ||| ||  ||||||||||||||||||| ||||||||| | ||| ||||    
T  15215557 tctctctctaatggtgtcatttctaatcctatcctgtatagtcttaccactcatccagcacaacatcctcatctccgcttcacttactttactctcgtgt 15215656  T
Q  157 -ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgc 255  Q
     ||||||| |||||||||||| ||||||||||||||||  | ||||||||| |||| |||||||||||| |||||| |||||||| |||||||||| |||    
T  15215657 tggctcttaaccgcccaacactccgtaccatacaacattttcggtctgactactgttcgatagaactttcctttcagcttaagtgatactttcttaccgc 15215756  T
Q  256 acaaaacac 264  Q
    |||| ||||    
T  15215757 acaagacac 15215765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 18752112 - 18752344
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||||||| |||||||||||   ||||||||||| |||    
T  18752112 catctaag-ctattttctaccaacttttctactataggtgctaccccca--ctctctctaatggtgtcatccctaatcctattatgtctagtcttaacac 18752208  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||  || ||||||| |||||||||||||||||||||| | ||| ||| |||||||| |||| ||| ||| |||||||||||||||| |  ||||||||    
T  18752209 tcattcagcgcaacattctcatctccgctacacttactttactctcgtgttggctcttaaccgtccagcactccgtaccatacaacattgccggtctgac 18752308  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtgg 241  Q
    || |||||||||||||||| |||| | |||||||||    
T  18752309 tgttgtccgatagaactttcctttgagcttaagtgg 18752344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 43 - 264
Target Start/End: Original strand, 12492116 - 12492336
Alignment:
Q  43 ggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacactta 142  Q
    |||||| ||||||||||||||  ||| ||||||||| ||||||||||  |||||||||||||||| ||| |  ||||||||||||| || ||||||||||    
T  12492116 ggtgctacccccattctctct--aatggtgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatatctgctacactta 12492213  T
Q  143 cttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtgg 241  Q
    | |||||||  ||| | ||||| |||||||||||| ||||||||| |||||  |  |||| ||| |||||||||||||||||| |||||| |||||||||    
T  12492214 catgattctcatgttgactcttaaccgcccaacactccgtaccatgcaacaacgccggtcggacggctgtccgatagaactttcctttcatcttaagtgg 12492313  T
Q  242 tactttcttatcgcacaaaacac 264  Q
    |||||||||||||||||||||||    
T  12492314 tactttcttatcgcacaaaacac 12492336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 40813370 - 40813224
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct--aattgtgtcattcctaatcctatctggtctagtcttacc 104  Q
    |||||||  ||||||||| ||||||||||||||||||||||| |||||| |||||||||  ||| ||||||||| |||||||||   |||||||||||||    
T  40813370 catctaaacctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgtcattcttaatcctattatgtctagtcttacc 40813271  T
Q  105 acttatcaagtgcaacatcctcatctccgctacacttacttgattct 151  Q
    ||| ||| |   ||||||||| ||||| ||||||||||||| |||||    
T  40813270 actcatccaacacaacatcctaatctctgctacacttactttattct 40813224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 13986536 - 13986391
Alignment:
Q  11 taagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttat 110  Q
    |||||||||||||| |||  |||| ||||||||||||| |||| | || |||| ||||  |||||||||||||  ||||| ||||||| |||||||| ||    
T  13986536 taagtctattttctaccatattttgtactataggtgctaccccaaatccctctttaatgatgtcattcctaattatatctcgtctagtattaccactcat 13986437  T
Q  111 caagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    | |||| |||||||||||||||||||  ||||| ||||||| ||||    
T  13986436 ccagtgtaacatcctcatctccgctatgcttacctgattctcgtgt 13986391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 4032922 - 4032990
Alignment:
Q  198 ggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4032922 ggtctgactgttgtccgataaaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 4032990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 45419280 - 45419157
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||||||||||| | ||| ||||||||||||||||||| |||| |||||||||  ||| ||||||||||||||| ||||   ||||||||||||||| |    
T  45419280 ctaagtctattttataccatcttttctactataggtgctaccccaattctctct--aatggtgtcattcctaatcttatcccttctagtcttaccactaa 45419183  T
Q  110 tcaagtgcaacatcctcatctccgct 135  Q
    || |  |||||||| |||||||||||    
T  45419182 tccaacgcaacatcttcatctccgct 45419157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 13171895 - 13172072
Alignment:
Q  17 tattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtg 116  Q
    |||||||  ||| |||||||||||||||||||||||| | ||||||||||||  ||||||| |||||||||||  |||||||||||| ||  ||| | ||    
T  13171895 tattttccaccatcttttctactataggtgcttccccaactctctctctaatcttgtcatttctaatcctatcccgtctagtcttactacacatccaatg 13171994  T
Q  117 caacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacat 193  Q
    |||||| |||||||| | |   |||| || ||| || || ||| |||| |||||||||||| | ||||||||||||||    
T  13171995 caacattctcatctctgatgtgcttaatttatttttatgttggttcttaaccgcccaacactctgtaccatacaacat 13172072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 11523979 - 11524040
Alignment:
Q  26 ccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatccta 87  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  11523979 ccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatccta 11524040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 25439390 - 25439323
Alignment:
Q  198 ggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacc 265  Q
    |||||||||| |||  ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  25439390 ggtctgactgttgtgtgatagaactttcctttcaacttaagtggtactttcttatcacacaaaacacc 25439323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 2518637 - 2518761
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagt 115  Q
    ||||||||  ||| ||||||||||  ||||||| |||| ||| ||||||||||| ||||||| ||||||||||||  ||||||||||||||  ||| | |    
T  2518637 ctattttccaccatcttttctacttgaggtgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatctagtcttaccacacatccaat 2518735  T
Q  116 gcaacatcctcatctccgctacactta 142  Q
    ||||||| |||||| ||||||||||||    
T  2518736 gcaacattctcatc-ccgctacactta 2518761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 21121180 - 21121105
Alignment:
Q  31 ttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||| ||||||||||||| |||||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||    
T  21121180 ttttgtactataggtgctacccccactctctctctaatggtgccatttctaatcctatcccgtctagtcttaccac 21121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 6510676 - 6510803
Alignment:
Q  19 ttttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgca 118  Q
    |||||| |||||||||||| |||||||||| | | |  |||||||  ||| |||||||| |||||| |||||  ||||||||||||||||||| |   ||    
T  6510676 ttttctaccaacttttctattataggtgctacgctc--tctctcttcaatggtgtcatttctaatcatatctcatctagtcttaccacttatccaacaca 6510773  T
Q  119 acatcctcatctccgctacacttacttgatt 149  Q
    ||||| ||||| |||||||||||||| ||||    
T  6510774 acatcatcatc-ccgctacacttactcgatt 6510803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 8932748 - 8932676
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattccta 81  Q
    ||||||| |||||||||| |||||||||||||| || ||||| ||||||  ||||||||||| ||||||||||||    
T  8932748 catctaaatctattttctaccaacttttctactgtatgtgctaccccca--ctctctctaatggtgtcattccta 8932676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 32043631 - 32043537
Alignment:
Q  12 aagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||| ||||| ||| ||||| ||||||||||| | |||| | ||||||||||||  ||||||| ||||| |||||  |||||||||||||||    
T  32043631 aagtctagtttctaccatcttttgtactataggtgataccccaactctctctctaatgttgtcatttctaattctatcccgtctagtcttaccac 32043537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12796930 - 12797011
Alignment:
Q  1 ctaaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatc 84  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||| | || |||  |||| |||||| |||| ||||||||||    
T  12796930 ctaaatcatctaagcctattttctaccaacttttcttctataggtgttacctcca--ctctttctaatggtgttattcctaatc 12797011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 16351411 - 16351312
Alignment:
Q  32 tttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctc 131  Q
    ||||||||||||||||| |||  ||||||||||||||  ||||||| ||||  ||||   ||||||||||||||| |||| |  |||||||| |||||||    
T  16351411 tttctactataggtgctaccctaattctctctctaatgttgtcatttctaactctattccgtctagtcttaccacatatccaacgcaacatcttcatctc 16351312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 29520681 - 29520583
Alignment:
Q  32 tttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatct 130  Q
    |||||||||||| |||  |||| | |||||||||||| || ||||| |||||||||||   ||||||||||||||  ||| |  |||||||||||||||    
T  29520681 tttctactatagatgccaccccaactctctctctaatggtatcatttctaatcctatcccatctagtcttaccacacatccaacgcaacatcctcatct 29520583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 12491374 - 12491415
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgct 48  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  12491374 catctaagcctattttctaccaacttttctactataggtgct 12491415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 44681285 - 44681374
Alignment:
Q  17 tattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||  ||| |||||||| |||||||||| || | | | ||||||||||  ||||||| |||||| ||||| |||||||||||||||    
T  44681285 tattttccaccatcttttctattataggtgctaccacaactgtctctctaatgttgtcatttctaatcttatctcgtctagtcttaccac 44681374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 5908665 - 5908594
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctt 101  Q
    |||||||||||||||| || |||| | ||||||||||||  ||||||| |||||| ||||  ||||||||||    
T  5908665 cttttctactataggttctaccccaactctctctctaatgttgtcatttctaatcttatcccgtctagtctt 5908594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 25985560 - 25985468
Alignment:
Q  12 aagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||| ||||| ||| ||||||||||||||||||| |||| |  |||||||||||  |||| || ||||| |||||  |||| ||||||||||    
T  25985560 aagtctagtttctaccatcttttctactataggtgctaccccaa--ctctctctaatgttgtcgtttctaattctatcctgtcttgtcttaccac 25985468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 25439460 - 25439394
Alignment:
Q  60 ctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctc 126  Q
    ||||||||| || || |||||| ||||||||  ||||||||||||||| ||| || |||||||||||    
T  25439460 ctctctaatggtatcgttcctattcctatctcatctagtcttaccactaatccagcgcaacatcctc 25439394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 30113442 - 30113515
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatc 89  Q
    ||||||||| ||| ||||||||||||| ||| | |||| | ||||||||||||  |||||||| ||||| ||||    
T  30113442 ctattttctaccatcttttctactatatgtgttaccccgactctctctctaataatgtcattcataatcttatc 30113515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 10080191 - 10080239
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttacca 105  Q
    ||||||||||||  ||||||| |||||| ||||| ||||||||||||||    
T  10080191 tctctctctaatgttgtcatttctaatcttatctcgtctagtcttacca 10080239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 2e-86; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 7 - 263
Target Start/End: Original strand, 31960050 - 31960307
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  31960050 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccac 31960149  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  ||||||||    
T  31960150 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtctgac 31960249  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaaca 263  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31960250 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaaca 31960307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 3 - 266
Target Start/End: Complemental strand, 436279 - 436015
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||  |||||||||||    
T  436279 aaatcatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcttaatcctatcatgtctagtctta 436180  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    | ||| ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  ||||    
T  436179 cgactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtc 436080  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  436079 ggactgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 436015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 8 - 266
Target Start/End: Complemental strand, 33227254 - 33226995
Alignment:
Q  8 atctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||  ||||||||||||||||    
T  33227254 atctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcttaatcctatcatgtctagtcttaccact 33227155  T
Q  108 tatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgact 206  Q
     ||| || |||||||||||||||| ||||||||||| |||||||  || || ||||| |||||||||||| |||||||||||||||  |  |||| ||||    
T  33227154 catccagcgcaacatcctcatctctgctacacttacatgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggact 33227055  T
Q  207 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  33227054 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgtacaaaacacct 33226995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 3 - 266
Target Start/End: Original strand, 48174325 - 48174589
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||| ||||  |||||||||||    
T  48174325 aaatcatctaagcctattttctaccaacttttctactataggtgttacccccactctctctctaatggtgtcattcctaatcatatcatgtctagtctta 48174424  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    ||||| ||| |  |||||||||||||||  |||| |||||||||||| |  || || ||||| |||| ||||||| |||||||||||||||  |  ||||    
T  48174425 ccactcatccaacgcaacatcctcatctttgctatacttacttgattttcatgttgactcttaaccgtccaacactccgtaccatacaacaacgccggtc 48174524  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  48174525 tgactgctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacct 48174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 46583060 - 46583320
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||||||||||||||||||||||  ||||| |||||||| ||| |||||||||||||||||||   |||||||||||||||    
T  46583060 catctaagcctattttctaccaacttttctactataggtgctatccccactctctctcgaatggtgtcattcctaatcctatgctgtctagtcttaccac 46583159  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    || || | ||||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  | ||||||    
T  46583160 ttctctaatgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacagcgccgatctgac 46583259  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||| |||||||||| ||||||| ||||||| |||||||||||||||||||| ||||    
T  46583260 tgctgtccaatagaactttcctttcaaattaagtgatactttcttatcgcacaaaatacct 46583320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 23906531 - 23906797
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct------aattgtgtcattcctaatcctatctggtctagtct 100  Q
    |||||||| ||||||||| | ||||||||||||||||||||| |||||| |||||||||      ||| ||||||||||||||||||||| |||||||||    
T  23906531 catctaagcctattttctacaaacttttctactataggtgctacccccactctctctctctctctaatggtgtcattcctaatcctatcttgtctagtct 23906630  T
Q  101 taccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtagg 199  Q
    | ||||| ||| |  |||||||||||||||| |||||||||||||||||||  ||| | ||||| ||||||||||||  ||||||||||||||  |  ||    
T  23906631 tgccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacacttcgtaccatacaacaacgccgg 23906730  T
Q  200 tctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23906731 tcggactgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 23906797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 43433970 - 43433704
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct------aattgtgtcattcctaatcctatctggtctagtct 100  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||      ||| ||||||||||||||||||||| |||||||||    
T  43433970 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctctctaatggtgtcattcctaatcctatcttgtctagtct 43433871  T
Q  101 taccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtagg 199  Q
    | ||||| ||| |  |||||||||||||||| |||||||||||||||||||  ||| | ||||| |||||||||||| |||||||||||||||  |  ||    
T  43433870 tgccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccgg 43433771  T
Q  200 tctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||| ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  43433770 tctgattgctgtccgatagaactttcctttcaacttaagtgacactttcttatcgcacaaaacacct 43433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 56375336 - 56375076
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| || |||||| |||||||||||| |||||||||| |||| | |||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  56375336 catctaagcctgttttctaccaacttttctattataggtgctacccctactctctctctaatggtgtcattcctaatcttatcttgtctagtcttaccac 56375237  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||  ||||||||  || || ||||| |||||||||||| ||||||||||||| |  |  ||||||||    
T  56375236 tcatccaacgcaacatcctcatctctgctacacttgtttgattctcatgttgactcttaaccgcccaacactccgtaccatacaataacgctggtctgac 56375137  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||    
T  56375136 tgctgtccgatagatctttcctttcaaattaagtggtactttcttatcgcacaaaacacct 56375076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 27450415 - 27450667
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||||||||    || |||||  |||||||||||||||    
T  27450415 catctaagcctattttctaccaacttttctactataggtgctaccccca--ctctctctaatggtgtcatt----attctatcatgtctagtcttaccac 27450508  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||||||||||||||||||||||||| | ||| |||| ||||||| || ||||||||| |||||||||||||||| || ||||||||    
T  27450509 tcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttggctcttaactgcccaacactccgtaccatacaacattgtcggtctgac 27450608  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    || |||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  27450609 tgttgtctgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacac 27450667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 263
Target Start/End: Complemental strand, 53707840 - 53707583
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || ||| ||||| |||||| |||||||||||| |||||||  |||||||||||| ||    
T  53707840 catctaagcctattttctaccaacttttctactataggtgctacctccactctctttctaatggtgtcattcctagtcctatcatgtctagtcttactac 53707741  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |  ||||||||| ||  |  |||| ||     
T  53707740 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactctctaccatacatcaacgccggtcggaa 53707641  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaaca 263  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53707640 tgctggccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaaca 53707583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 1777253 - 1777511
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||| |||||||||||||    |||  ||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  1777253 catctaagcctattttctaccaacttttttactataggtgctatttcca--ctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 1777350  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||  |||| |||||||||||| |  ||| | ||||| |||   |||||| ||||| |||||||||  || ||||||||    
T  1777351 tcatccaacgcaacatcctcatctttgctatacttacttgattttcatgttgactcttaacctttcaacactccgtatcatacaacaacgtcggtctgac 1777450  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1777451 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 1777511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 50287008 - 50286759
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||| ||||||||||||| ||||||||||||||||||||      |||   ||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  50287008 catccaagtctattttctaccaacttttctactataggt------ccc---ctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 50286918  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  ||||| |||||||||| |||||||||||||||||||  ||| | ||||| |||||||||||| ||||| |||||||||  || | ||||||    
T  50286917 tcatccaacgcaacttcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtatcatacaacaacgtcgatctgac 50286818  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
     | |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  50286817 ggttgtccgatagaactttcctttcaacttaaatggtactttcttatcgcacaaaacac 50286759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 52569751 - 52569992
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  ||||||||||||| |    
T  52569751 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttacccc 52569850  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |   ||||||||| ||||| |||||||||||||||||||  || || ||||| ||||  |||||| |||||||||||||||     ||||||||    
T  52569851 tcatccaacacaacatcctgatctctgctacacttacttgattctcatgttgactcttaaccgaacaacactccgtaccatacaacaacaccggtctgac 52569950  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtacttt 247  Q
    || ||||| |||||||||| ||||||||||||||||||||||    
T  52569951 tgttgtccaatagaactttcctttcaacttaagtggtacttt 52569992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 1211638 - 1211883
Alignment:
Q  17 tattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtg 116  Q
    ||||| || ||||||| | ||||||||||||| | ||||  ||||||| ||| ||||||||||||||| ||||  ||||||| |||||||| ||| ||||    
T  1211638 tatttcctaccaacttgtttactataggtgctgctccca--ctctctcgaatggtgtcattcctaatcatatcatgtctagttttaccactcatccagtg 1211735  T
Q  117 caacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccga 215  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||| |||| ||||||| | |||||| |||||||    |||||||||| |||||||    
T  1211736 caacatcctcatatccgctacacttacttgattctcgtgttggctcttaaccgtccaacactctgtaccacacaacatcaccggtctgactgttgtccga 1211835  T
Q  216 tagaacttttctttcaacttaagtggtactttcttatcgcacaaaaca 263  Q
    ||||||||| |||||||||||||||||| |||||||||  ||||||||    
T  1211836 tagaactttcctttcaacttaagtggtattttcttatcatacaaaaca 1211883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 267
Target Start/End: Original strand, 47265434 - 47265702
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||||  ||||||||| | | ||||||||||||||||| | |||||| ||||||| |||| ||||||||| ||||| ||||  |||||||||||    
T  47265434 aaatcatctaaacctattttctactaccttttctactataggtgttacccccactctctctataatggtgtcattcataatcttatcatgtctagtctta 47265533  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    ||||| ||| || |||||||||||||||  ||||||| ||||||||||| ||| || ||||| |||| |||| ||   |||||||||||||| |  ||||    
T  47265534 ccactcatccagcgcaacatcctcatctttgctacacctacttgattctcgtgttgactcttaaccgtccaatactttgtaccatacaacatcgctggtc 47265633  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtgg---tactttcttatcgcacaaaacaccta 267  Q
    |||||| |||| |||||||||||  |||||||||||||||   ||||||||||||||||||||||||||    
T  47265634 tgactgttgtcagatagaactttcatttcaacttaagtggtactactttcttatcgcacaaaacaccta 47265702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 4440899 - 4440682
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||| ||||||||||||||||  |||||||||||||||    
T  4440899 catctaagcctattttctaccaacttttctactataggtgctgccccca--ctctctctaatggtgccattcctaatcctatcatgtctagtcttaccac 4440802  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||| ||||| |||||||||||||||||||  || || ||||| |||| ||||||| ||||| |||||||||  || ||||||||    
T  4440801 tcatcgaacgcaacatcctaatctctgctacacttacttgattctcatgttgactcttaaccg-ccaacaccccgtatcatacaacaacgttggtctgac 4440703  T
Q  206 tgctgtccgatagaacttttc 226  Q
    |||||||||||||||||||||    
T  4440702 tgctgtccgatagaacttttc 4440682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 48622779 - 48623023
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||||||||||||||| |||||| ||||||  ||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  48622779 catctaagcctattttctaccaacttttctactatgggtgctaccccca--ctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 48622876  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||| | |||              ||||||||| |  |  ||||||||    
T  48622877 tcatccaaagcaacatcctcatctctgctacacttacttgattctcatgttgactcctaacc--------------accatacaataacgccggtctgac 48622962  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48622963 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 48623023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 12494794 - 12494618
Alignment:
Q  9 tctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactt 108  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||     
T  12494794 tctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactc 12494695  T
Q  109 atcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtacc 184  Q
    ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||    
T  12494694 atccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtacc 12494618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 41009585 - 41009846
Alignment:
Q  7 catctaagtctattttctc-ccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttacca 105  Q
    |||||||||||||||| |  ||||||||||||||||||||||| |||||||| |||| |||||  ||||||| ||||||||| |  |||||||||||||     
T  41009585 catctaagtctatttttttaccaacttttctactataggtgctacccccattatctccctaatgatgtcatttctaatcctaccatgtctagtcttaccg 41009684  T
Q  106 cttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctga 204  Q
     | ||| |  ||||||||||||| ||||||||||||||||||||||  || |||||||| | |||||||||| |||||| ||||||||| |  |||||||    
T  41009685 atcatccaacgcaacatcctcatttccgctacacttacttgattctcatgttggctcttaatcgcccaacactccgtactatacaacatcgctggtctga 41009784  T
Q  205 ctgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
     || ||||| ||||||||||| |  |||||||||||||| |||||||||  ||||| |||||    
T  41009785 ttgttgtccaatagaacttttttcccaacttaagtggtattttcttatcatacaaatcacct 41009846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 33191085 - 33191261
Alignment:
Q  8 atctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||   |||| ||||||||||    
T  33191085 atctaagtctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctatctaatcttaccact 33191184  T
Q  108 tatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtac 183  Q
     ||| || |||||||||||||||| |||||||||||||||||||  || || ||||| | |||||||||| ||||||    
T  33191185 catccagcgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaatcgcccaacactccgtac 33191261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 16002973 - 16002714
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| |||||||||  |||||||| ||| ||||||||   || || || |||| |||| ||||||||||||||||||| | |||||||||||||||    
T  16002973 catctaagactattttctatcaacttttataccataggtgccatcctcactcactctataatggtgtcattcctaatcctatttcgtctagtcttaccac 16002874  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| ||  ||||||| || ||| | |||||||||||||||||| |||| | ||||| ||| ||||||||  ||| | ||||||||| |  ||||| ||    
T  16002873 tcatccagcacaacatcatcgtcttcactacacttacttgattctcgtgttgactcttaacctcccaacacttcgttc-atacaacatcgctggtctaac 16002775  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || |||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  16002774 tgatgtctgataaaacttttctttgaacttaagtggtactttcttatcacacaaaacacct 16002714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 265
Target Start/End: Complemental strand, 35690326 - 35690091
Alignment:
Q  31 ttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatct 130  Q
    |||||||||||||||||| |||| | ||||||| |||  ||||||||||||||||||||| |||||||||||| ||| ||| |  |||||||||||||||    
T  35690326 ttttctactataggtgctaccccaactctctctttaaaggtgtcattcctaatcctatctcgtctagtcttactactcatccaacgcaacatcctcatct 35690227  T
Q  131 ccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttcttt 229  Q
    | |||||||||||||||||||  || ||| |||| ||| | |||||  || || |||||||||| || ||||| |||| |||| ||||||| ||| || |    
T  35690226 cggctacacttacttgattctcatgttggttcttaaccacacaacattccatatcatacaacatcgtcggtctaactgttgtctgatagaattttcctct 35690127  T
Q  230 caacttaagtggtactttcttatcgcacaaaacacc 265  Q
    ||||||||  || ||||||||||| || ||||||||    
T  35690126 caacttaaacggcactttcttatcacataaaacacc 35690091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 116 - 262
Target Start/End: Complemental strand, 39708395 - 39708248
Alignment:
Q  116 gcaacatcctcatctccgctacacttacttgattcttgtgtggc-tctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccg 214  Q
    ||||||||||||||| | |||||||||||||||||| |||| || |||| |||||||||||| |||||||||||||||| || | || ||||| || |||    
T  39708395 gcaacatcctcatctgcactacacttacttgattctcgtgttgcctcttaaccgcccaacactccgtaccatacaacattgtcgatcggactgttgcccg 39708296  T
Q  215 atagaacttttctttcaacttaagtggtactttcttatcgcacaaaac 262  Q
    |||||||||| |||||||||||||||||||||||||||| || |||||    
T  39708295 atagaactttcctttcaacttaagtggtactttcttatcacaaaaaac 39708248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 45205088 - 45205271
Alignment:
Q  12 aagtctattttctcccaacttttctactataggtgcttcccccat-tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttat 110  Q
    ||||||||||||| ||| |||||||||||||||  || ||||||  ||||||  |||| ||||||||||||||||||||  |||||||||||||||| ||    
T  45205088 aagtctattttctaccatcttttctactataggcactacccccaactctctcgttaatggtgtcattcctaatcctatcccgtctagtcttaccactcat 45205187  T
Q  111 caagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacat 193  Q
    | |   ||||||||||||||||||||| ||||||||||||| ||| ||| |||| || ||||||||| ||||||||||||||||    
T  45205188 ccaacacaacatcctcatctccgctacgcttacttgattctcgtgttggttcttaactgcccaacactccgtaccatacaacat 45205271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 186
Target Start/End: Original strand, 39100771 - 39100949
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| |||||||||  |||||||||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||||||   ||||||||||||||    
T  39100771 catctaagcctattttctatcaacttttcttctataggtgctaccccca--ctctctctaatggtgtcattcctaatcctatcatttctagtcttaccac 39100868  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccat 186  Q
    | ||   | |||||||||||||||||||||||||||| ||| ||| ||| |||||||| || | ||||||| | |||||||    
T  39100869 tcatttggcgcaacatcctcatctccgctacacttacatgactctcgtgttggctcttaactgtccaacactctgtaccat 39100949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 1793506 - 1793319
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||||  |||||||| ||||||||| ||||||||||||| |||||  |||||| ||||| ||||||||||||||| ||||  ||  |||||||||      
T  1793506 catctaagcttattttctaccaacttttttactataggtgctacccccgctctctccctaatggtgtcattcctaatcttatcccgttaagtcttaccgt 1793407  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacat 193  Q
    | ||| |   ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||| | ||| ||||||||||    
T  1793406 tcatccaacacaacatcctcatctccgctacacttacttgattctagtgttggctcttaaccgccaaacactctgtatcatacaacat 1793319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 27983227 - 27983108
Alignment:
Q  26 ccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcct 125  Q
    ||||||||||||||||||||||| ||| || |||||||||||| ||||||||||||||||||||  || ||||||||||||| ||| ||  ||| |||||    
T  27983227 ccaacttttctactataggtgctaccctcactctctctctaatggtgtcattcctaatcctatcatgtatagtcttaccactcatctagcacaatatcct 27983128  T
Q  126 catctccgctacacttactt 145  Q
    ||||||||||||||||||||    
T  27983127 catctccgctacacttactt 27983108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 28236229 - 28236087
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||  ||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||   |||| ||||||||     
T  28236229 catctaagcctattttccaccaacttttctactataggtgctaccccca--ctctctctaatggtgtcattcctaatcctatcatatctaatcttaccat 28236132  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattct 151  Q
    | ||| | |||| |||| | ||||| |||||||||||||||||||    
T  28236131 tcatccaatgcagcatcataatctctgctacacttacttgattct 28236087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 31459073 - 31458887
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattct--ctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||| ||||||||| ||| ||||||||||||||||||| || | | |||  ||||||||| || |||||||||||||||||  ||||||||||||||||    
T  31459073 ctaagcctattttctaccatcttttctactataggtgctacctcgactctgtctctctaatggtatcattcctaatcctatcatgtctagtcttaccact 31458974  T
Q  108 tatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacat 193  Q
     | | |  |||||||||||||||  ||||||||||||| ||| | ||| ||| |||| || ||||||||| |||||||||| |||||    
T  31458973 caaccaacgcaacatcctcatctgtgctacacttactttattttcgtgttggttcttaactgcccaacactccgtaccataaaacat 31458887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 37773687 - 37773823
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| || |||||||||||||||||||| ||||  | ||||||||||| || |||||| |||| |||||  |||||||||||||||    
T  37773687 catctaagcctattttctaccgacttttctactataggtgctacccct-tactctctctaatggtatcattcataattctatcatgtctagtcttaccac 37773785  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttact 144  Q
    | ||| || ||||||| ||||||||  |||||||||||    
T  37773786 tcatccagcgcaacattctcatctctcctacacttact 37773823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 37797898 - 37797798
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || ||| |||||||||||| |||||||| |||||| ||||  ||||||||||| |||    
T  37797898 catctaagcctattttctaccaacttttctactataggtgctacctccactctctctctaatggtgtcatttctaatcttatcatgtctagtcttatcac 37797799  T
Q  107 t 107  Q
    |    
T  37797798 t 37797798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 238
Target Start/End: Complemental strand, 55579014 - 55578845
Alignment:
Q  70 gtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccg 168  Q
    ||||||||| ||||| ||||| || |  |||||||||||||  |   |||||||||||| |  |||||||||| |||||||| |||| || |||| ||||    
T  55579014 gtgtcattcataatcttatctcgtttcctcttaccacttattcaacacaacatcctcatatatgctacacttaattgattctcgtgttggttcttaaccg 55578915  T
Q  169 cccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaag 238  Q
    ||||||||  | ||||||||||||| || |||||||||| |||||||||||| ||| ||| |||||||||    
T  55578914 cccaacacttcataccatacaacattgttggtctgactgttgtccgatagaattttccttccaacttaag 55578845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 231
Target Start/End: Original strand, 7092480 - 7092680
Alignment:
Q  31 ttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatct 130  Q
    ||||||||||||||||||   || | ||| ||||||||  |||||||| ||||| ||||   ||||| ||||||||| ||| ||  ||||||||||||||    
T  7092480 ttttctactataggtgctattccaactctgtctctaatcatgtcattc-taatcatatcccttctagacttaccactcatccagcacaacatcctcatct 7092578  T
Q  131 ccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttcttt 229  Q
    | |||||||||||||| |||| ||| ||| |||| || ||| || || |||||||||||||||| |  | ||| |||||||||  |||||| ||| ||||    
T  7092579 ctgctacacttacttgcttctcgtgttggttcttaactgcctaaaactccgtaccatacaacatcgccgatctaactgctgtctaatagaattttccttt 7092678  T
Q  230 ca 231  Q
    ||    
T  7092679 ca 7092680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 26037835 - 26037904
Alignment:
Q  124 ctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaaca 192  Q
    |||||||||||| ||||||||||||||| ||| |||||||| |||||||||||| ||||| |||||||||    
T  26037835 ctcatctccgctccacttacttgattctcgtgttggctcttaaccgcccaacactccgtatcatacaaca 26037904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 54470249 - 54470129
Alignment:
Q  11 taagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttat 110  Q
    |||||||| ||||  ||| ||||||||||||||||||| |||| | ||||||||||||  ||| ||| | |||| ||||   ||||||||||||||  ||    
T  54470249 taagtctagtttccaccatcttttctactataggtgctaccccaactctctctctaatgttgttatttcaaatcatatcccatctagtcttaccacacat 54470150  T
Q  111 caagtgcaacatcctcatctc 131  Q
    | | |||||||||||||||||    
T  54470149 ccaatgcaacatcctcatctc 54470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 20601882 - 20602025
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||  ||||||||| ||||||||||||||||| ||| |  | ||| |||||| ||| | |||||||||  ||| |||||  || | |||||| | |    
T  20601882 catctaatcctattttctaccaacttttctactataagtgttatctccactctctccctagtggtgtcattctcaattctatcatgtattgtcttagcgc 20601981  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattc 150  Q
    | ||| || ||||||||||||| ||||||||||||||| |||||    
T  20601982 tcatccagcgcaacatcctcatatccgctacacttactggattc 20602025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 26037741 - 26037799
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct 65  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||| || |||||||||    
T  26037741 catctaagcctattttctaccaacttttctactataggtgctaccctcactctctctct 26037799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 54914618 - 54914684
Alignment:
Q  199 gtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacc 265  Q
    |||||||| ||| ||||||||| ||| |||||||||||||||||| ||||||||| || ||||||||    
T  54914618 gtctgactcctgaccgatagaattttcctttcaacttaagtggtattttcttatcacataaaacacc 54914684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 20591546 - 20591607
Alignment:
Q  17 tattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattc 78  Q
    |||||||| ||||||||||||||||| ||||| |||||| |||||| ||||| |||||||||    
T  20591546 tattttctaccaacttttctactataagtgctacccccactctctccctaatggtgtcattc 20591607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 20105761 - 20105856
Alignment:
Q  61 tctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    ||||||||  ||||||| |||||| ||||| |||||||||||||||  ||| |  |||||||| |||||||||||||| |||  | ||||||||||    
T  20105761 tctctaatgttgtcatttctaatcatatctcgtctagtcttaccacacatccatcgcaacatcatcatctccgctacatttatattattcttgtgt 20105856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 38904023 - 38904142
Alignment:
Q  75 attcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaa 173  Q
    |||||||||||||| |  ||||||||||| ||  ||||| | |||||| |||||||  |||||||||| || ||||||||| ||| | ||||| ||||||    
T  38904023 attcctaatcctatatcttctagtcttactacaaatcaaatacaacattctcatctttgctacacttattttattcttgtgttggttttttactgcccaa 38904122  T
Q  174 cacaccgtaccatacaacat 193  Q
    ||| ||||  ||||||||||    
T  38904123 cactccgttgcatacaacat 38904142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 44047598 - 44047666
Alignment:
Q  21 ttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatc 89  Q
    |||| ||| ||||||||||||||||||| |||| | ||||||||||||  ||||||| ||||| |||||    
T  44047598 ttctaccaccttttctactataggtgctaccccaactctctctctaatgttgtcatttctaattctatc 44047666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 51421725 - 51421682
Alignment:
Q  60 ctctctaattgtgtcattcctaatcctatctggtctagtcttac 103  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||    
T  51421725 ctctctaatggtgtcattcataatcctatctcgtctagtcttac 51421682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 217
Target Start/End: Complemental strand, 11389681 - 11389555
Alignment:
Q  92 gtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaa 190  Q
    ||||||| |||||||  ||| | | ||||||||||||||| ||||| ||||||| ||||| | | ||| |||| ||||||||||||  | | ||||||||    
T  11389681 gtctagttttaccacacatccaatccaacatcctcatctctgctacgcttactttattctcgagttggttcttaaccgcccaacactactttccatacaa 11389582  T
Q  191 catagtaggtctgactgctgtccgata 217  Q
    ||| || ||||| ||  ||||||||||    
T  11389581 cattgtcggtcttacaactgtccgata 11389555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 51252720 - 51252791
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttac 103  Q
    ||||||||||| ||||||| |||| |  |||||||||||   |||||| |||||||||||| ||||||||||||    
T  51252720 cttttctactagaggtgctaccccaa--ctctctctaatgtagtcatttctaatcctatctcgtctagtcttac 51252791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 49987471 - 49987378
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttac 103  Q
    ||||| ||||||||  ||| |||||||||||||||||   |||  | ||||| ||||||  ||||||| |||||||||||  ||||||||||||    
T  49987471 ctaagcctattttccaccatcttttctactataggtgtgacccagactctctatctaatgttgtcatttctaatcctatcatgtctagtcttac 49987378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 17900520 - 17900388
Alignment:
Q  13 agtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatca 112  Q
    |||||| ||||| ||  ||||||||||||||||||| |||| | ||  ||||||||   |||||| |||||  ||||   ||||||||||||||  |||     
T  17900520 agtctagtttctaccgtcttttctactataggtgctaccccaactccgtctctaatgtcgtcatttctaattttatcccatctagtcttaccacacatcc 17900421  T
Q  113 agtgcaacatcctcatctccgctacacttactt 145  Q
    |  ||||||||||||| || ||||| |||||||    
T  17900420 aacgcaacatcctcatttctgctacgcttactt 17900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 26356662 - 26356626
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtg 46  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  26356662 ctaagtctattttctaccatcttttctactataggtg 26356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 38571006 - 38571074
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagt 98  Q
    ||||| ||||||||||||||||||   |||||||| |||  ||||||| | |||||||||| |||||||    
T  38571006 cttttgtactataggtgcttccccagctctctctcaaatgttgtcatttccaatcctatcttgtctagt 38571074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 82771 - 82509
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||  |||||||||||    
T  82771 aaatcatctaagcccattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcttaatcctatcatgtctagtctta 82672  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    | ||| ||| ||||||||||||||||||||||| |||||||||||||||  || |||||||| |||||||||||| ||||||||||||| || || ||||    
T  82671 ctactcatccagtgcaacatcctcatctccgctgcacttacttgattctcatgttggctcttaaccgcccaacactccgtaccatacaagatcgtcggtc 82572  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||| |||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  82571 tgactgttgtccgatagaactttcctttcaacttaaggagtactttcttatcgcacaaaacac 82509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 7 - 262
Target Start/End: Complemental strand, 34869466 - 34869210
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  34869466 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 34869367  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  ||||||||||||||||  ||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  ||||||||    
T  34869366 tcatccaacgcaacatcctcatctctactacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtctgac 34869267  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaac 262  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34869266 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaac 34869210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 7 - 262
Target Start/End: Complemental strand, 43281720 - 43281466
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  43281720 catctaagcctattttctaccaacttttctactataggtgctaccccca--ctctctctaatggtgtcattcctaatcctatattgtctagtcttaccac 43281623  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||||||||| ||||||||||||||| | ||||| || ||||||| |||||||||||| | |||||||||||||| |  ||| ||||    
T  43281622 tcatccagcgcaacatcctcatccccgctacacttactttactcttgcgttggctcttaaccgcccaacactctgtaccatacaacattgccggtttgac 43281523  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaac 262  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  43281522 tgctgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaac 43281466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 31005269 - 31005009
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||  ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| |||| |||||||||||||||  |||||||||||||||    
T  31005269 catctaaacctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgttattcctaatcctatcctgtctagtcttaccac 31005170  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||| ||||| |||||||||||||||  |  |||| |||    
T  31005169 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcctaacactccgtaccatacaacaacgccggtcggac 31005070  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31005069 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 31005009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 35906437 - 35906697
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  35906437 catctaagcctattttctaccaacttttctactataggtgctacctccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccac 35906536  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| ||| |||||||| ||||| |||||||||  |  |||| |||    
T  35906537 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccacccaacactccgtatcatacaacaacgccggtcggac 35906636  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35906637 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 35906697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 7 - 267
Target Start/End: Complemental strand, 38607050 - 38606790
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||| ||||||||||||||||| |||||| ||||||| ||||  |||||||||||||||||||  |||||||||||||||    
T  38607050 catctaagcctattttctaccaacctttctactataggtgctacccccactctctct-taatgttgtcattcctaatcctatcatgtctagtcttaccac 38606952  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||  ||||||||||||||||||||| | ||| |||| ||||||| |||||||||||| |||||||||||||||| |  ||||||||    
T  38606951 tcatccagcgcaacattatcatctccgctacacttactttactctcgtgttggctcttaaccgcccaacactccgtaccatacaacattgccggtctgac 38606852  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacaccta 267  Q
    || |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  38606851 tgttgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacaccta 38606790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 33350042 - 33350300
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| |||||||||  |||||||||||||||||||||  |||||| |||||||||||| ||||||||| ||||||||||  |||||||||||||||    
T  33350042 catctaagcctattttctagcaacttttctactataggtgcaacccccactctctctctaatggtgtcattcttaatcctatcatgtctagtcttaccac 33350141  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  |||| |||    
T  33350142 tcatccaaggcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggac 33350241  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  33350242 tgctgtccgatagaactttcctgtcaacttaagtggtactttcttatcgcacaaaacac 33350300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 33073002 - 33072742
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||| |||||||||||    
T  33073002 aaatcatctaagcctattttctaccaacttttctactataggtgctaccccca--ctctctctaatggtgtcattcctaatcctatcttgtctagtctta 33072905  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    ||||| ||| |  |||||||| ||||||| |||||||||| ||||||||  ||| | ||||| |||||||||||| | |||||||||||||  |  ||||    
T  33072904 ccactcatccaacgcaacatcatcatctctgctacacttatttgattctcatgttgactcttaaccgcccaacactctgtaccatacaacaacgccggtc 33072805  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    | |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  33072804 taactgttgtccgatagaactttccttttaacttaagtggtactttcttatcgcacaaaacac 33072742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 12841511 - 12841771
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || ||| |||||||||||| | ||||||||||||||||||  ||||||| |||||||    
T  12841511 catctaagcctattttctaccaacttttctactataggtgctacctccactctctctctaatggggtcattcctaatcctatcatgtctagttttaccac 12841610  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |   ||||||||||||||| |||||||||||||||||||  || || ||||| ||| |||||||| |||||||||||||||  |  |||| |||    
T  12841611 tcatccaacacaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccacccaacactccgtaccatacaacaacgccggtcagac 12841710  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12841711 tgctgtacgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 12841771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 263
Target Start/End: Original strand, 39906602 - 39906868
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||| || |||||||||||| ||||||||||||||||||||  |||||||||||    
T  39906602 aaatcatctaagcctattttctaccaacttttctactataggtgctaccctcactctctctctaatggtgtcattcctaatcctatcctgtctagtctta 39906701  T
Q  103 ccacttatcaagtgcaacatcctcatctcc-----gctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagt 196  Q
    ||||| ||| |  ||| ||||||||||||      |||||||||||||||||||  ||| | ||||| | |||| ||||| |||||||||||||||  |     
T  39906702 ccactcatccaacgcagcatcctcatctcatctctgctacacttacttgattctcatgttgactcttaatcgcctaacactccgtaccatacaacaacgc 39906801  T
Q  197 aggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaaca 263  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39906802 cggtctgactgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaaca 39906868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 11593996 - 11593746
Alignment:
Q  17 tattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtg 116  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||| ||| ||||||||||||||| ||||  |||||||||||||||| ||| |  |    
T  11593996 tattttctaccaacttttctactataggtgctacccccactctctctcaaatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaacg 11593897  T
Q  117 caacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccga 215  Q
    ||||||||||||||| |||||||||||||||||||  || || ||||| |||| ||||||| |||||||||||||||  |  ||||  |||| |||||||    
T  11593896 caacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgtccaacactccgtaccatacaacaacgccggtcgaactgttgtccga 11593797  T
Q  216 tagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  11593796 tagaactttcctttcaacttaagtggtacttttttatcgcacaaaacacct 11593746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 32630636 - 32630383
Alignment:
Q  11 taagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttat 110  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||| |||||||| ||| || |||| ||||||||||||  |||||||||||||||| ||    
T  32630636 taagcctattttctaccaacttttctactataggtgctacccccactctctctccaatggtatcat-cctaatcctatcatgtctagtcttaccactcat 32630538  T
Q  111 caagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgct 209  Q
    | ||  ||||||||||||||||||||||||||||| | ||| |||| || |||| |||||||| ||| |||||||||||||||| || ||||||| || |    
T  32630537 ccagctcaacatcctcatctccgctacacttactttactctcgtgttggttcttaaccgcccagcactccgtaccatacaacattgtcggtctgattgat 32630438  T
Q  210 gtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  32630437 gtccgatagaactttcctttcagcttaagtgatactttcttatcgcacaaaacac 32630383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 36652038 - 36651780
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||||||||||||||| | |||  | ||| | | ||||||||| ||||||||||||||||||||  |||||||||||||||    
T  36652038 catctaagcctattttctaccaacttttctactatggatgc--cacccctaccctctctaatggtgtcattcctaatcctatcctgtctagtcttaccac 36651941  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| | |||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  |||| ||     
T  36651940 tcatccaacgcaacatcctcatctctgttacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggat 36651841  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36651840 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 36651780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 49029322 - 49029067
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  49029322 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 49029223  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  | |||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||     |||  |||    
T  49029222 tcatccaacgtaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacaccggttggac 49029123  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||     |||||||| ||||||||||||||||||||||    
T  49029122 tgctgtccgatagaactttcctttc-----aagtggtattttcttatcgcacaaaacacct 49029067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 46356092 - 46356347
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||  |||||||||||||||    
T  46356092 catctaaacctattttctaccaacttttctactataggtgctacccccattctctctctgatggtgtcattcctaatcctatcctgtctagtcttaccac 46356191  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||  |  ||||||||| |||||| |||||||||    ||||||  ||| | ||||| |||||||||||| |||||||||||||||  |  ||||||||    
T  46356192 tcattcaacgcaacatcc-catctctgctacactt----gattctcatgttgactcttaaccgcccaacactccgtaccatacaacaatgccggtctgac 46356286  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  46356287 tactgtccgatagaactttcctttcaacttaagtagtactttcttatcgcacaaaacacct 46356347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 23404462 - 23404204
Alignment:
Q  9 tctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactt 108  Q
    |||||| ||||||||||||||||||||||||||| ||| | |||||| |||||| ||||| ||||||||||||||||||||  || |||||||||| ||     
T  23404462 tctaagcctattttctcccaacttttctactataagtgttacccccactctctccctaatggtgtcattcctaatcctatcatgtatagtcttaccgctc 23404363  T
Q  109 atcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactg 207  Q
    ||| || ||||||||||||| |||  ||||||||||||||||| ||| ||||| || ||||||||| ||  |||||||||||| || || ||||||||||    
T  23404362 atccagcgcaacatcctcatttccaatacacttacttgattctcgtgctggcttttaaccgcccaaaacttcgtaccatacaatatcgtcggtctgactg 23404263  T
Q  208 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
     |||||||||||| ||| ||||||||||||||||| |||||||||| || |||||||||    
T  23404262 ttgtccgatagaattttcctttcaacttaagtggtcctttcttatctcagaaaacacct 23404204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 7273085 - 7272825
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||| | | ||| ||||||| ||||  ||||||||||||||||||||  || |||||||||| |    
T  7273085 catctaagcctattttctaccaacttttctactataggtgatactcccgttctctccctaaaggtgtcattcctaatcctatcccgtgtagtcttaccgc 7272986  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| ||  ||||||||||||||||| ||||||||||||||||| ||| |||||||  |||||||||||| | ||| |||||||||| || ||| ||||    
T  7272985 tcatccagcacaacatcctcatctccggtacacttacttgattctcgtgttggctctcaaccgcccaacactctgtatcatacaacattgtcggtttgac 7272886  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||| |||||| |||||| || ||||||||||||||||||||||||| ||||||| ||||    
T  7272885 tgctgaccgatacaactttcctctcaacttaagtggtactttcttatcacacaaaatacct 7272825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 13859244 - 13859476
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  13859244 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 13859343  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    |  || |  |||||||||||||||| |||  |||||||||||||| ||| |  ||||| |||||||||||  |||||||| ||||||  |  ||||| ||    
T  13859344 tcgtccaacgcaacatcctcatctctgct--acttacttgattctcgtgttaactcttaaccgcccaacattccgtaccaaacaacactgccggtctaac 13859441  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtg 240  Q
    |||||| | |||||||||| |||||||||||||||    
T  13859442 tgctgttcaatagaactttcctttcaacttaagtg 13859476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 57 - 262
Target Start/End: Original strand, 36869575 - 36869781
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    |||||||||||| ||||||||||||||||||||  ||| |||||||||||| ||| |   ||||||||||||||| ||||||||||||||||||  ||||    
T  36869575 tctctctctaatggtgtcattcctaatcctatcatgtccagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattcacgtgt 36869674  T
Q  157 gg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgc 255  Q
     | |||||   ||| |||||  |||||||||||||||| |  || ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  36869675 tgactcttagtcgctcaacattccgtaccatacaacatcgccggcctgactgttgtccgatagaactttcctttcaacttaagtggtactttcttatcgc 36869774  T
Q  256 acaaaac 262  Q
    |||||||    
T  36869775 acaaaac 36869781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 45836716 - 45836865
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  45836716 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcttgtctactcttaccac 45836815  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    | ||| || |||||||||||||||||||| ||||||||||| ||| ||||    
T  45836816 tcatccagcgcaacatcctcatctccgctgcacttacttgactctcgtgt 45836865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 185
Target Start/End: Complemental strand, 37617991 - 37617811
Alignment:
Q  7 catctaagtctatttt-ctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttacca 105  Q
    |||||||| ||||||| || ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  37617991 catctaagcctatttttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcttgtctagtcttacca 37617892  T
Q  106 cttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtacca 185  Q
    || ||| |  |||||||||||||||| ||||||||| |||||||||  || || ||||| ||||||||| || ||||||||    
T  37617891 ctcatccaacgcaacatcctcatctctgctacacttgcttgattctcatgttgactcttaaccgcccaagactccgtacca 37617811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 44855408 - 44855543
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||||||||||||||||||| ||  ||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  44855408 catctaagcctattttctaccaacttttctactataggtactatccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 44855507  T
Q  107 ttatcaagtgcaacatcctcatctccgctacactta 142  Q
    | ||| ||  ||||||||| ||||| ||||||||||    
T  44855508 tcatccagcacaacatcctgatctctgctacactta 44855543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 35559225 - 35559373
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactat-aggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctt 101  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||| |||||| |||||||| ||| ||||||||||||||||||||   |||  ||||    
T  35559225 aaatcatctaagcctattttctaccaacttttctactataaggtgctacccccactctctctcaaatggtgtcattcctaatcctatcaaatctgatctt 35559324  T
Q  102 accacttatcaagtgcaacatcctcatctccgctacacttacttgattc 150  Q
    |||||| ||| |  |||||||||||||||   |||||||||||||||||    
T  35559325 accactcatccaacgcaacatcctcatctttactacacttacttgattc 35559373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 37616790 - 37616704
Alignment:
Q  178 ccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||||||||||||  || ||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  37616790 ccgtaccatacaacaatgtcggtctgactgctggccgatataactttcctttcaacttaagtggtactttcttatcgcacaaaacac 37616704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 6374914 - 6374833
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctat 88  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  6374914 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctat 6374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 29650430 - 29650349
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctat 88  Q
    |||||||| ||||||||| |||| |||||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||    
T  29650430 catctaagcctattttctaccaatttttctactataggtgctgcccccactctctctcgaatggtgtcattcctaatcctat 29650349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 36136807 - 36136711
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||| ||||||||| ||| ||||||||||||||||||| |||| | |||||||||||| ||||||||||||| ||||||   ||||||||||||||    
T  36136807 ctaagactattttctaccatcttttctactataggtgctaccccaactctctctctaatggtgtcattcctaaacctatcccttctagtcttaccac 36136711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 43491354 - 43491210
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||| |||| ||||||||||| | |||| | |||||| | ||| ||||||||||||||| ||||   |||| ||||||| |    
T  43491354 catctaagcctattttctaccaatttttatactataggtgttacccctactctctccccaatggtgtcattcctaatcatatcccatctaatcttaccgc 43491255  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattct 151  Q
    | ||| ||  ||||||||||||||| |||||||||||| ||||||    
T  43491254 tcatccagcacaacatcctcatctcggctacacttactagattct 43491210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 56 - 266
Target Start/End: Original strand, 7189519 - 7189728
Alignment:
Q  56 ttctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg 155  Q
    ||||||||||||| ||||||||| || |||||||| ||||| |||||||  | ||  |   |||||||||||||||| |||  ||||||||||| |||||    
T  7189519 ttctctctctaatggtgtcattcata-tcctatctcgtctaatcttaccggtcattcaacacaacatcctcatctccactatgcttacttgatttttgtg 7189617  T
Q  156 t-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcg 254  Q
    | || |||| ||| |||||||| | |||||||||||||| || ||||||||| |||| | ||| || || |||||||| ||||||  ||||||||||||     
T  7189618 ttggttcttaaccacccaacactctgtaccatacaacatcgtcggtctgactactgt-ctataaaatttctctttcaatttaagtaatactttcttatca 7189716  T
Q  255 cacaaaacacct 266  Q
     | |||||||||    
T  7189717 aataaaacacct 7189728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 46014416 - 46014498
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatc 89  Q
    |||||||| ||||||||| ||||||||||||||||||||||  |||||| |||||||||||| |||||||| |||||| ||||    
T  46014416 catctaagcctattttctaccaacttttctactataggtgcaacccccactctctctctaatggtgtcatttctaatcttatc 46014498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 36514446 - 36514576
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||||||| ||||| ||| ||||||||||||||||||| |||| |  |||||||||||  |||| || ||||| |||||  || ||||||||||||  |    
T  36514446 ctaagtctagtttctaccatcttttctactataggtgctaccccaa--ctctctctaatgttgtcctttctaattctatcccgtttagtcttaccacaca 36514543  T
Q  110 tcaagtgcaacatcctcatctccgctacactta 142  Q
    || |  |||||||||||||||| ||||||||||    
T  36514544 tccaacgcaacatcctcatctctgctacactta 36514576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 39811979 - 39811873
Alignment:
Q  31 ttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatct 130  Q
    |||||||  ||||||||| |||| | ||||||||||||  ||||||| |||||||||||  |||||||||||||||  ||| |  ||||||||||||| |    
T  39811979 ttttctatgataggtgctgccccaactctctctctaatgttgtcatttctaatcctatcacgtctagtcttaccacacatccaaagcaacatcctcatat 39811880  T
Q  131 ccgctac 137  Q
    |||||||    
T  39811879 ccgctac 39811873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 47848717 - 47848524
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||| ||||||||  ||| ||||||||||||||| ||| |||| | ||||||||||||  | ||| | || ||||||||  |||||||||||||||  |    
T  47848717 ctaagcctattttccaccatcttttctactataggcgctaccccaactctctctctaatgttatcacttctgatcctatcccgtctagtcttaccacaca 47848618  T
Q  110 tcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtct 202  Q
    || |   |||||||||||||||| ||| ||||| || ||||| ||| ||| |||| ||| |||||||| || | |||| || |||||| |||||    
T  47848617 tccaacacaacatcctcatctcccctagacttattttattctcgtgttggttcttaaccacccaacactccattccattcatcatagtcggtct 47848524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 48919231 - 48919174
Alignment:
Q  209 tgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||| ||| || ||||||||||||| |||||||||||||||||||||||||||    
T  48919231 tgtccgatataaccttcctttcaacttaaggggtactttcttatcgcacaaaacacct 48919174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 2885958 - 2886018
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaa 67  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||| ||||    
T  2885958 catctaagcctattttctaccaacttttctactataggtgctacccccactctctccctaa 2886018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 25579416 - 25579536
Alignment:
Q  116 gcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccg 214  Q
    ||||||||||||||||| |||| |||| || ||||| |||| || |||| |||||||||||  |||| ||||||||||| |  ||||| || ||||||||    
T  25579416 gcaacatcctcatctcctctacgcttattttattctcgtgttggttcttaaccgcccaacattccgttccatacaacatcgccggtcttacagctgtccg 25579515  T
Q  215 atagaacttttctttcaactt 235  Q
    |||||| ||| | ||||||||    
T  25579516 atagaattttcccttcaactt 25579536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 48736138 - 48736234
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||||| ||||||||| |||||||||| |||||||| |||| | ||||||| ||||   |||||| |||||  |||||  ||||||||||||||    
T  48736138 ctaagtctagtttctcccatcttttctactgtaggtgctaccccaactctctctataatgtcgtcatttctaattttatctcatctagtcttaccac 48736234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 8492478 - 8492569
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||||||| ||| | ||| ||||||||||| | |||| | |||||| ||||| ||||||||| ||||||||||  |||||||||| |||||    
T  8492478 ctattttctaccatcatttttactataggtgttaccccaaatctctccctaatggtgtcattcgtaatcctatcccgtctagtcttgccact 8492569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 22349666 - 22349625
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgct 48  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  22349666 catctaagcctattttctaccaacttttctactataggtgct 22349625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 15681292 - 15681216
Alignment:
Q  118 aacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacat 193  Q
    ||||| || |||||| |||||||||||||| ||| |||| ||||||| |||||||||||| |  |||||||||||||    
T  15681292 aacattctaatctccactacacttacttgagtctcgtgttggctcttaaccgcccaacactctataccatacaacat 15681216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 36869480 - 36869527
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttccccc 54  Q
    |||||||  ||||||||| ||||||||||||||||||||||| |||||    
T  36869480 catctaaacctattttctaccaacttttctactataggtgctaccccc 36869527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 19262682 - 19262797
Alignment:
Q  20 tttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaa 119  Q
    ||||| ||| ||||||||| ||||||||| |||| |  |||||||||||  ||||||| ||||  |||||  ||||||| ||||||| |||||   | ||    
T  19262682 tttctaccatcttttctacaataggtgctaccccaa--ctctctctaatattgtcatttctaactctatcatgtctagtattaccacatatcacacgtaa 19262779  T
Q  120 catcctcatctccgctac 137  Q
    ||||||||||||| ||||    
T  19262780 catcctcatctccactac 19262797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 25731638 - 25731687
Alignment:
Q  56 ttctctctctaattgtgtcattcctaatcctatctggtctagtcttacca 105  Q
    ||||||||||||  ||||||||| ||||||| ||| ||||||||||||||    
T  25731638 ttctctctctaaaggtgtcattcttaatcctttctcgtctagtcttacca 25731687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 27021992 - 27022077
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacactta 142  Q
    ||||||||||||  |||||||  ||||||||||  ||||||||||| |||  ||| | |||||||| |||||  ||||||||||||    
T  27021992 tctctctctaatgttgtcatttttaatcctatcctgtctagtcttatcacacatccaatgcaacattctcattgccgctacactta 27022077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 31682838 - 31682879
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgct 48  Q
    |||||||| ||||||||| ||||||||||||||||| |||||    
T  31682838 catctaagcctattttctaccaacttttctactatatgtgct 31682879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 43282432 - 43282325
Alignment:
Q  29 acttttctactataggtgcttcccccattctctctct---aattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcct 125  Q
    |||||||||||||||||||| |||| | |||||||||   |||  ||||||| |||||| ||||  |||||| ||||||||  ||| |  ||||||||||    
T  43282432 acttttctactataggtgctaccccaactctctctctctaaatgttgtcatttctaatcatatcatgtctagacttaccacacatctaacgcaacatcct 43282333  T
Q  126 catctccg 133  Q
    ||| ||||    
T  43282332 catatccg 43282325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 1210791 - 1210531
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  1210791 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccac 1210692  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  ||||  ||    
T  1210691 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcgaac 1210592  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1210591 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 1210531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 696315 - 696069
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  696315 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccac 696216  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||||||||||||||||||||||||| | ||| ||| |||||||| ||| |||||||| |||||||||||||||| |  ||||||||    
T  696215 tcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttggctcttaaccacccaacactccgtaccatacaacattgccggtctgac 696116  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttat 252  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  696115 tgctgtccgatagaactttcctttcagcttaagtggtactttcttat 696069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 7 - 265
Target Start/End: Complemental strand, 9592780 - 9592521
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| | ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  9592780 catctaagcctattttctacaaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 9592681  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || ||  |||| |||||||||||| |||||||||||||||  ||  |||||||    
T  9592680 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgattcttaaccgcccaacactccgtaccatacaacaacgtcagtctgac 9592581  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacc 265  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9592580 tattgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacc 9592521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 51441001 - 51441251
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  51441001 catctaagcctattttctaccaacttttctactataggtgttacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 51441100  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    |  || | ||||||||||||||||| |||||||| ||||||||||  || || ||||| |||||||||||| |||||||||||||||  || |||| |||    
T  51441101 tcgtccaatgcaacatcctcatctctgctacactcacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgtcggtcggac 51441200  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgca 256  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51441201 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgca 51441251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 258
Target Start/End: Complemental strand, 15085980 - 15085728
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||   ||||||||||||||    
T  15085980 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctatctagtcttaccac 15085881  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    |  || || |||||||||||||||||||||||||||||| | ||| ||| |||||||| |||||||||||| |||||||||||||||| |  ||| ||||    
T  15085880 tcgtccagcgcaacatcctcatctccgctacacttactttactctcgtgttggctcttaaccgcccaacactccgtaccatacaacattgccggtttgac 15085781  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcaca 258  Q
    ||||||| ||||||||||| |||||| |||||||||| |||||||||||||||    
T  15085780 tgctgtctgatagaactttcctttcagcttaagtggtgctttcttatcgcaca 15085728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 30202366 - 30202626
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||| ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  30202366 catctaagcctattttctaccaacctttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 30202465  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| | |||||| ||||||  |  |||| |||    
T  30202466 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactctgtaccacacaacaacgccggtcggac 30202565  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30202566 tgttgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 30202626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 32082981 - 32083241
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| |  |||||||||||||||    
T  32082981 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctaccctgtctagtcttaccac 32083080  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||||||||||||||||||| ||||| | ||| ||| || ||||| |||||||||||| | |||||||||||||| || ||||||||    
T  32083081 tcatccagcgcaacatcctcatctccgctacacatactttactctcgtgttgactcttaaccgcccaacactctgtaccatacaacattgtcggtctgac 32083180  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || |||| ||||||||||| |||||| |||||||||||||||||||||||| | |||||||    
T  32083181 tgttgtctgatagaactttcctttcagcttaagtggtactttcttatcgcatagaacacct 32083241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 49347629 - 49347889
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||||||||||||||||| |||| |||| | |||||||| ||| ||||||||||||||||||||  |||||||||||||||    
T  49347629 catctaagcctattttctaccaacttttctactatagatgctacccctactctctctccaatggtgtcattcctaatcctatcctgtctagtcttaccac 49347728  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||  |||||||||||||||||||  || || ||||| ||||||||||||  ||||||||||||||  || |||| |||    
T  49347729 tcatccaacgcaacatcctcatctttgctacacttacttgattctcatgttgactcttaaccgcccaacacttcgtaccatacaacaaggttggtcggac 49347828  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  49347829 tgctgtccgatagatttttcctttcaacttaagtggtactttcttatcgcacaaaacacct 49347889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 8671964 - 8671706
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  8671964 catctaagcctattttctaccaacttttctactataggtgctaccccca--ctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 8671867  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||| ||||| |||||||||||||||||||  ||| | ||||| |||| ||||||   ||||||||||||||  |  ||||||||    
T  8671866 tcatccaacgcaacatccttatctctgctacacttacttgattctcatgttgactcttaaccgtccaacatttcgtaccatacaacaacgccggtctgac 8671767  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8671766 tgttgtctgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 8671706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 263
Target Start/End: Complemental strand, 22090142 - 22089883
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct--aattgtgtcattcctaatcctatctggtctagtcttacc 104  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||  ||| ||||||||| ||||||||||  |||||||||||||    
T  22090142 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgtcattcataatcctatcctgtctagtcttacc 22090043  T
Q  105 acttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctg 203  Q
    ||| ||| |   || |||||||||||| |||||||||||||||||||  ||| | ||||| |||||||||||| |||||||| ||||||  |  |||| |    
T  22090042 actcatccaacacagcatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccacacaacaacgccggtcgg 22089943  T
Q  204 actgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaaca 263  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  22089942 actgctgtccgatagaactttcctttcaacttaagtggtattttcttattgcacaaaaca 22089883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 266
Target Start/End: Complemental strand, 8391809 - 8391556
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagt 115  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| || ||||||||||||| ||| |      
T  8391809 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcttgtgtagtcttaccactcatccaac 8391710  T
Q  116 gcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtacc--atacaacatagtaggtctgactgctgtc 212  Q
     ||||||| ||||||||||||||||||||| | ||| ||| || ||||| |||||||||||| | |||||  |||| |||| |  |||||||||||||||    
T  8391709 acaacatcttcatctccgctacacttactttactctcgtgttgactcttaaccgcccaacactctgtaccatatacgacattgccggtctgactgctgtc 8391610  T
Q  213 cgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||| ||| || |||| | ||||||||||||||||||||||||||||||||||    
T  8391609 cgataaaacattcctttaagcttaagtggtactttcttatcgcacaaaacacct 8391556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 43240616 - 43240877
Alignment:
Q  8 atctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct--aattgtgtcattcctaatcctatctggtctagtcttacca 105  Q
    ||||||| |||||||||  ||| |||||||||||||||||| |||||| |||||||||  ||| | ||||||| ||||||||||  ||||||||||||||    
T  43240616 atctaagcctattttctatcaatttttctactataggtgctacccccactctctctctctaatggcgtcattcataatcctatcatgtctagtcttacca 43240715  T
Q  106 cttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctga 204  Q
    || ||| |  |||||||||||||||| |||||||||||||||||||  ||| | ||||| ||| |||||||| ||||| |||||||||  |  |||| ||    
T  43240716 ctcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaacctcccaacactccgtatcatacaacaacgccggtcgga 43240815  T
Q  205 ctgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  43240816 ctgctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacct 43240877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 51602102 - 51601844
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||| ||||  |||||||||||||||    
T  51602102 catctaagcctattttctaccaacttttctactataggtgctaccctca--ctctctctaatggtgtcattcctaatcatatcatgtctagtcttaccac 51602005  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  ||||||||||||| ||  ||||||||||||||||||  ||| | ||||| ||| |||||||| |||||||||||||||  |  |||| |||    
T  51602004 tcatctaacgcaacatcctcatatctactacacttacttgattctcatgttgactcttaaccacccaacactccgtaccatacaacaacgccggtcggac 51601905  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    | |||||||||||||||||  |||||||||||| ||||||||||||||| |||||||||||    
T  51601904 tactgtccgatagaactttcatttcaacttaaggggtactttcttatcgaacaaaacacct 51601844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 34792585 - 34792768
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||| ||||| ||||||||||||||||||||||| |||||| |||||||||||| || |||||||||||||||||  |||||||||||||||    
T  34792585 catctaagcctactttctaccaacttttctactataggtgctacccccactctctctctaatggtttcattcctaatcctatcatgtctagtcttaccac 34792684  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaa 190  Q
    | ||| || |||||||||||||||| ||||||||| ||||||||| ||| || ||||| |||||||||||| |||||||||||||    
T  34792685 tcatccagcgcaacatcctcatctctgctacactt-cttgattctcgtgttgactcttaaccgcccaacactccgtaccatacaa 34792768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 32231190 - 32231339
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  ||||| |||||||||    
T  32231190 catctaagcctattttctaccaatttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctaatcttaccac 32231289  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    | ||| || ||||||||||||||||  |||||||||||||||||| ||||    
T  32231290 tcatctagcgcaacatcctcatctctactacacttacttgattctcgtgt 32231339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 4001691 - 4001821
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  4001691 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctattttgtctagtcttaccac 4001790  T
Q  107 ttatcaagtgcaacatcctcatctccgctac 137  Q
    | ||| || ||||||||||||||| ||||||    
T  4001791 tcatctagcgcaacatcctcatcttcgctac 4001821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 9599633 - 9599888
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||| ||||||||| ||| ||||||||||||||||| | | || | ||||||||||||  |||||||||||||| ||||  |||||||||||||||| |    
T  9599633 ctaagcctattttctaccatcttttctactataggtgttactccaactctctctctaatgatgtcattcctaatcatatcccgtctagtcttaccactca 9599732  T
Q  110 tcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgc 208  Q
    || |   ||||||||||||||| ||||| ||||||||||| ||||| ||| |||  ||||| ||||||   ||| ||||| |||| |  |||||||||||    
T  9599733 tccaacacaacatcctcatctctgctacgcttacttgattattgtgttggttctcaaccgcacaacactttgtatcataccacatcgctggtctgactgc 9599832  T
Q  209 tgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
     ||| ||||||| |||  |||||||| ||| |||||||||||||| || |||||||    
T  9599833 ggtctgatagaattttcatttcaactgaagcggtactttcttatcacataaaacac 9599888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 30 - 237
Target Start/End: Original strand, 37463132 - 37463334
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatc 129  Q
    ||||||||||||||||||| |||| |  ||||||||||| |||||||||||||||||| |  |||||||||||||||| ||| | || ||||||||||||    
T  37463132 cttttctactataggtgctaccccaa--ctctctctaatggtgtcattcctaatcctaacctgtctagtcttaccactcatccaatgaaacatcctcatc 37463229  T
Q  130 tccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctt 228  Q
    ||| ||||    |||||||||||||| ||| |||| ||| |||||||| | |||||||||||||| |   ||||||||| |||| ||||||| ||| |||    
T  37463230 tcctctac----acttgattcttgtgttggttcttaaccacccaacactctgtaccatacaacattgctagtctgactgttgtctgatagaattttcctt 37463325  T
Q  229 tcaacttaa 237  Q
    |||||||||    
T  37463326 tcaacttaa 37463334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 38807901 - 38808093
Alignment:
Q  1 ctaaatcatctaagtctattttctcccaacttttctactataggtgcttcccccat----tctctctctaattgtgtcattcctaatcctatctggtcta 96  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||    |||||||||||| |||||||| ||||| |||||  ||||     
T  38807901 ctaaaccatctaagtctattttctaccaacttttctactataggtgctacccccattctctctctctctaatggtgtcatttctaattctatcccgtctg 38808000  T
Q  97 gtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtggctctttaccgcccaacacaccgtaccatacaacat 193  Q
    |||||||||| |||| |   |||||||||||| ||||| || ||||||| ||||| ||   |||||| ||| |||||||| | ||||| ||||||||    
T  38808001 gtcttaccac-tatccaacacaacatcctcatatccgccacgcttacttaattctcgt---gctcttaacctcccaacactctgtaccgtacaacat 38808093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 256
Target Start/End: Complemental strand, 39140543 - 39140310
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatca-------agtgcaacat 122  Q
    ||||||||||||||||||| | || | ||||||| |||| || ||||||||||||||||||  ||||||||||||| ||| ||       |  |||||||    
T  39140543 cttttctactataggtgctacgccaactctctctgtaatggtttcattcctaatcctatctcatctagtcttaccagttaccactcatccaacgcaacat 39140444  T
Q  123 cctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaac 221  Q
    |||||||||  |||| ||||||||||| |  || ||| |||| || ||||||||| | ||||||||||||||    |||||||||||||||||||||||     
T  39140443 cctcatctctactacgcttacttgattttcatgatggttcttaactgcccaacactc-gtaccatacaacatcaccggtctgactgctgtccgatagaat 39140345  T
Q  222 ttttctttcaacttaagtggtactttcttatcgca 256  Q
    ||  ||||||| ||||| |||||||||||||||||    
T  39140344 ttgcctttcaatttaagcggtactttcttatcgca 39140310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 237
Target Start/End: Original strand, 18469327 - 18469547
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagt 115  Q
    |||||||||  || ||| ||||||||||||| | |||| |  ||||||||||||||||||||||||||| ||||  |||||||||||||||| ||  |      
T  18469327 ctattttctatcatcttctctactataggtgttaccccaa--ctctctctaattgtgtcattcctaatcatatcatgtctagtcttaccactcatacaac 18469424  T
Q  116 gcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccg 214  Q
    ||| |||| |||||||||||||  |||||||||||| ||| ||| |||| ||||||||  ||   ||| ||||||||||  | || ||||||| |||||     
T  18469425 gcagcatcgtcatctccgctacgtttacttgattctcgtgttggttcttaaccgcccagtacttagtatcatacaacatctttggcctgactgatgtcca 18469524  T
Q  215 atagaacttttctttcaacttaa 237  Q
    ||| || ||||||| ||||||||    
T  18469525 atataaattttcttgcaacttaa 18469547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 9509361 - 9509229
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||| ||||||| | ||| ||||||||||||||||||| |||| | |||||||||||| |||||||| |||||| ||||  ||||||||||| |||| |    
T  9509361 ctaagcctattttttaccatcttttctactataggtgctaccccaactctctctctaatggtgtcatttctaatcatatcctgtctagtcttatcactca 9509262  T
Q  110 tcaagtgcaacatcctcatctccgctacactta 142  Q
    || |   ||||||||||||||| ||||| ||||    
T  9509261 tccaacacaacatcctcatctctgctacgctta 9509229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 70 - 264
Target Start/End: Complemental strand, 19936505 - 19936310
Alignment:
Q  70 gtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccg 168  Q
    |||||||||||| |||||||   ||||||||||||||| ||| |   |||||| |||||||||||||  |||| ||||||||  ||| || |||| ||||    
T  19936505 gtgtcattcctattcctatcccatctagtcttaccactcatccaacacaacattctcatctccgctatgcttatttgattctcatgttggttcttaaccg 19936406  T
Q  169 cccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||||| |  |||| || ||||| |  ||||| |||||||||||||| || ||| ||||||  ||||| |||||||||||||| || |||||||    
T  19936405 cccaacactctataccctataacattgctggtctaactgctgtccgatataattttcctttcattttaagcggtactttcttatcacataaaacac 19936310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 264
Target Start/End: Original strand, 34827403 - 34827596
Alignment:
Q  72 gtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcc 170  Q
    |||||| |||||| ||| | |||||||||||||||| ||| |   ||||||||||||||| | |||||||| ||| || | |||| || |||| ||||      
T  34827403 gtcatttctaatcttatatcgtctagtcttaccactcatccaacacaacatcctcatctcagttacacttatttgtttttcgtgttggttcttaaccgaa 34827502  T
Q  171 caacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||| | |||||||||||||| || | |||||||| ||||| ||| || ||| ||||||| |||||  ||||||||||||| || |||||||    
T  34827503 caacactctgtaccatacaacatcgttgatctgactgttgtccaatataattttcctttcaatttaagcagtactttcttatcacataaaacac 34827596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 52561850 - 52561947
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||| |||||||||  || | ||||||||| ||||||| |||| | |||||||||||| ||||||||||||||| ||||  ||||||||||||||||    
T  52561850 ctaagcctattttctatcatcatttctactaaaggtgctaccccaactctctctctaatggtgtcattcctaatcatatcccgtctagtcttaccact 52561947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 27445743 - 27445686
Alignment:
Q  207 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||| || |||||||    
T  27445743 gctgcccgatagaactttcctttcaatttaagtggtactttcttatcacataaaacac 27445686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 41560328 - 41560235
Alignment:
Q  160 tctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatc 253  Q
    |||| ||||||||| || ||||| |||||||||| |  |||||||| ||  || ||||||| ||| ||||||||||||| ||||||||||||||    
T  41560328 tcttaaccgcccaatactccgtatcatacaacatcgctggtctgacagcgttcggatagaattttcctttcaacttaagcggtactttcttatc 41560235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 264
Target Start/End: Original strand, 46226603 - 46226776
Alignment:
Q  92 gtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaa 190  Q
    ||||||||| |||||| ||| |  |||||||| |||||||||||| |||||||||||||| ||| ||| | || |  || |||||   ||||||||||||    
T  46226603 gtctagtctcaccactcatccaacgcaacatcatcatctccgctaaacttacttgattctcgtgttggttgttaattgctcaacatttcgtaccatacaa 46226702  T
Q  191 catagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    ||| ||   | |||| | |||| ||||||| |||||||||||||||||   |||||||||| | || |||||||    
T  46226703 catcgtcactatgacagttgtctgatagaatttttctttcaacttaagcactactttcttagcacataaaacac 46226776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 52831942 - 52831846
Alignment:
Q  168 gcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||||||  |||| |||||||||| || ||||| ||||  |||||||| || ||||||||||| |||| ||  |||||||||||||| |||||||    
T  52831942 gcccaacacttcgtatcatacaacattgtcggtctaactgtcgtccgatacaatttttctttcaatttaaatgacactttcttatcgcataaaacac 52831846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 27848051 - 27848140
Alignment:
Q  17 tattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    |||||||| ||| ||||||||| | ||||||| || | | |||||||||||| |||| |||||| ||||||||  ||||||||||||||||    
T  27848051 tattttctaccatcttttctaccacaggtgctaccacaactctctctctaatggtgttattcct-atcctatcccgtctagtcttaccact 27848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 39894820 - 39894686
Alignment:
Q  15 tctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaag 114  Q
    |||||||| ||||| ||||||||||||||| ||| |||  ||||||||| | || |||| |||| |||||||||||  |||| |||| ||||||||| |     
T  39894820 tctatttt-tcccatcttttctactataggggctaccca-attctctctatgatagtgttattcttaatcctatctcatctaatcttgccacttatccaa 39894723  T
Q  115 tgcaacatcctcatctccgctacacttacttgattct 151  Q
       |||| ||| |||||| |||||||||||| |||||    
T  39894722 cttaacaacctaatctccactacacttactttattct 39894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 26016398 - 26016313
Alignment:
Q  92 gtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttga--ttcttgtgtggctctttaccgcccaacac 176  Q
    |||||||||||||||  ||| |  |||||||||||||||| ||||| ||||||| |  ||||||| ||| |||||||||||||||||    
T  26016398 gtctagtcttaccacacatccaacgcaacatcctcatctctgctacgcttactttatgttcttgt-tggttctttaccgcccaacac 26016313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 43423742 - 43423671
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctt 101  Q
    ||||||||||||||||| | |||| | ||||||||||||   |||||| |||||||||||  ||||||||||    
T  43423742 cttttctactataggtgttaccccaactctctctctaatgtggtcatttctaatcctatcctgtctagtctt 43423671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 267
Target Start/End: Original strand, 11331415 - 11331561
Alignment:
Q  122 tcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaa 220  Q
    |||||||||||||||  || |||||||||||||| ||| || |  |||| |||||| | |||||||||||||| ||   ||||| || |||| |||| ||    
T  11331415 tcctcatctccgctatgctaacttgattcttgtgttggttcctagccgcacaacactctgtaccatacaacatcgtcaatctgattgttgtctgatataa 11331514  T
Q  221 cttttctttcaacttaagtggtactttcttatcgcacaaaacaccta 267  Q
     ||| ||||||||||||   |||| || ||||| || ||||||||||    
T  11331515 ttttcctttcaacttaatcagtacatttttatcacataaaacaccta 11331561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 267
Target Start/End: Original strand, 11489436 - 11489582
Alignment:
Q  122 tcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaa 220  Q
    |||||||||||||||  || |||||||||||||| ||| || |  |||| |||||| | |||||||||||||| ||   ||||| || |||| |||| ||    
T  11489436 tcctcatctccgctatgctaacttgattcttgtgttggttcctagccgcacaacactctgtaccatacaacatcgtcaatctgattgttgtctgatataa 11489535  T
Q  221 cttttctttcaacttaagtggtactttcttatcgcacaaaacaccta 267  Q
     ||| ||||||||||||   |||| || ||||| || ||||||||||    
T  11489536 ttttcctttcaacttaatcagtacatttttatcacataaaacaccta 11489582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 12262000 - 12262060
Alignment:
Q  70 gtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctc 131  Q
    |||||||| ||||  |||||| ||||||||||||||| |||||| || ||||||||||||||    
T  12262000 gtgtcatttctaaatctatctcgtctagtcttaccacatatcaa-tgtaacatcctcatctc 12262060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 9e-79; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 9706822 - 9706562
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||| ||||||||| || ||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  9706822 catctaagcctattttctaccaacttttctacaataggtgctacctccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 9706723  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| ||||||||||||||||||||||||||||||||| | ||| ||| || ||||| ||| || |||||  ||||||||||||||| |  ||||||||    
T  9706722 tcatccagtgcaacatcctcatctccgctacacttactttactctcgtgttgactcttaaccacctaacacttcgtaccatacaacattgccggtctgac 9706623  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  9706622 tgctgttcgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacct 9706562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 7 - 265
Target Start/End: Original strand, 20427872 - 20428131
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||| ||| ||||||    
T  20427872 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtcttgtcctaccac 20427971  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || ||||||||||||||||||||||||||| |||| ||| ||| |||||||| ||| |||||||| | |||| |||||||||  |  || ||||    
T  20427972 tcatccagcgcaacatcctcatctccgctacacttatttgactctcgtgttggctcttaaccacccaacactctgtactatacaacatttttagtttgac 20428071  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacc 265  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  20428072 tgctgtccaatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacc 20428131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 10100095 - 10100351
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||||  |||||||| ||||||||||||||||| ||||  ||||||  ||||||||||| |||||||| |||||| ||| | |||||||||||||||    
T  10100095 catctaagcttattttctaccaacttttctactatatgtgcgaccccca--ctctctctaatggtgtcatttctaatcatatattgtctagtcttaccac 10100192  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||||||||||||||||||| ||| || | ||||||| ||| |||||||| |||||||||||||||| || ||||||||    
T  10100193 tcatctaacgcaacatcctcatctccgctacacttacttgactctcgtcttggctcttaacctcccaacactccgtaccatacaacatcgtcggtctgac 10100292  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  10100293 tactgtccgatagaactttcctttcaacttaagtggtactttcttatctcacaaaacac 10100351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 608203 - 607945
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| |||||||||  |||||||||||||||||||| | ||| ||  ||||||||||| ||||||||||||||||||||   ||||||||||||||    
T  608203 catctaagcctattttctatcaacttttctactataggtgataccctca--ctctctctaatggtgtcattcctaatcctatcctatctagtcttaccac 608106  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  | |||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||||| |||||| ||||||||| |  ||||||||    
T  608105 tcatccaacggaacatcctcatctccgctacacttactttattctcgtgttggctcttaaccgcccaacactccgtacaatacaacattgccggtctgac 608006  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||    
T  608005 tgctgtccgatagaacttttctttcagtttaagtggtcatgtcttatcgcacaaaacacct 607945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 265
Target Start/End: Complemental strand, 5631868 - 5631605
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttccccca----ttctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    ||||||||  |||||||| ||||||||||||||||||||| | ||||||     |||||||||||| ||||||||||||||| |||| ||||||||||||    
T  5631868 catctaagcatattttctaccaacttttctactataggtgttacccccactctctctctctctaatggtgtcattcctaatcatatccggtctagtctta 5631769  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    ||||| ||| |   |||||||||||||| |||||||||||||| | ||| | | |||||||| |||||||||||| || ||||||||||||| || ||||    
T  5631768 ccactcatccaacacaacatcctcatcttcgctacacttactttactctcgcgttggctcttaaccgcccaacactccataccatacaacattgtcggtc 5631669  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacc 265  Q
    |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  5631668 tgactgttgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacc 5631605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 5258384 - 5258644
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct--aattgtgtcattcctaatcctatctggtctagtcttacc 104  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||  ||  ||||||||| ||||||||||| |||||||||||||    
T  5258384 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctaacggtgtcattcataatcctatcttgtctagtcttacc 5258483  T
Q  105 acttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctg 203  Q
    ||| ||| |  ||||||| |||| |||||||||||||||||   ||| |||| |||||||  ||||||||||| |||||||||||||||| |  ||||||    
T  5258484 actcatccaacgcaacattctcacctccgctacacttactttgctctcgtgttggctcttcgccgcccaacactccgtaccatacaacattgccggtctg 5258583  T
Q  204 actgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||| |||||| |||||||    
T  5258584 actgttgtccgatagaactttcctttcagcttaagtggtactttctcatcgcaaaaaacac 5258644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 266
Target Start/End: Complemental strand, 14030849 - 14030592
Alignment:
Q  11 taagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctt-accactta 109  Q
    |||| ||||| ||| ||||||||||||||||||||||| |||||| | |||||||||| ||||||||||||||||||||  |||||||||| |||||| |    
T  14030849 taagcctattatctaccaacttttctactataggtgctacccccactatctctctaatggtgtcattcctaatcctatcctgtctagtcttaaccactca 14030750  T
Q  110 tcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgc 208  Q
    || |  |||||||||||||||| ||||||||||||| | ||| ||| || || || |||||||||||| |||||||||||||||| |   || ||||||     
T  14030749 tccatcgcaacatcctcatctctgctacacttactttactctcgtgttgacttttaaccgcccaacactccgtaccatacaacattgctagtttgactgt 14030650  T
Q  209 tgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  14030649 tgtccgatagaactttcatttcagcttaagtggtactttcttatcgcacaaaacacct 14030592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 6 - 224
Target Start/End: Complemental strand, 30031303 - 30031084
Alignment:
Q  6 tcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttacca 105  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| |||||| || ||||||||| ||| |||| |||||||||||  ||||||||||||||    
T  30031303 tcatctaagcctattttctaccaacttttctactataggtgctacccccactccctctctaatggtgacatttctaatcctatcccgtctagtcttacca 30031204  T
Q  106 cttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctga 204  Q
    || ||| |   ||||| |||||||||||||||||| ||||||||||  || |||||||| |||||||||||| ||||||||||||||||  | |||||||    
T  30031203 ctcatccaacacaacaacctcatctccgctacactaacttgattctcatgttggctcttaaccgcccaacactccgtaccatacaacatcattggtctga 30031104  T
Q  205 ctgctgtccgatagaacttt 224  Q
    ||||||||||||||||||||    
T  30031103 ctgctgtccgatagaacttt 30031084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 232
Target Start/End: Complemental strand, 28085422 - 28085196
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||  |||||||||||||||    
T  28085422 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcgtaatcctatcatgtctagtcttaccac 28085323  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || |||||  ||||||||||| |||||||||||| ||     ||||||||    
T  28085322 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttagccgcccaacactccgtaccatacagcaacaccggtctgac 28085223  T
Q  206 tgctgtccgatagaacttttctttcaa 232  Q
    ||||||||||||||||||| |||||||    
T  28085222 tgctgtccgatagaactttcctttcaa 28085196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 2689639 - 2689447
Alignment:
Q  70 gtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccg 168  Q
    ||||||||||||||||||||   | |||||||||  || ||| |   |||||||||||||||| ||||| |||||| ||||| | || |||| || ||||    
T  2689639 gtgtcattcctaatcctatcctatttagtcttactgctcatccatcacaacatcctcatctccactacatttacttaattctcgcgttggctgttaaccg 2689540  T
Q  169 cccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaa 261  Q
    |||||||| |||||||||||||||| |  ||||||||||||||||||| ||||||| |||||||||||||| || |||||||||| |||||||    
T  2689539 cccaacactccgtaccatacaacatcgacggtctgactgctgtccgattgaactttcctttcaacttaagtagtgctttcttatcacacaaaa 2689447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 253
Target Start/End: Original strand, 2065018 - 2065239
Alignment:
Q  37 actataggtgcttcccccattctctct----ctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctcc 132  Q
    ||||||||||||||||||| |||||||    ||||| |||||||| |||||||||||   | |||||||||| || ||| || | | |||||||||||||    
T  2065018 actataggtgcttcccccactctctctttttctaatggtgtcattactaatcctatcatatgtagtcttaccgctcatccagggtagcatcctcatctcc 2065117  T
Q  133 gctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttca 231  Q
    ||||||| ||||||||||| ||| |||||||| |||| ||||||  |||||||||||||||| |   || | || | |||||||||||| ||| ||||||    
T  2065118 gctacacgtacttgattctcgtgttggctcttaaccgtccaacattccgtaccatacaacatcgccagttttacggttgtccgatagaagtttcctttca 2065217  T
Q  232 acttaagtggtactttcttatc 253  Q
    |||||||  |||||||||||||    
T  2065218 acttaagatgtactttcttatc 2065239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 35043678 - 35043857
Alignment:
Q  8 atctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||||| ||||||||  |||||||||||||| ||||| || ||| || |||| ||||||| ||||||||| ||||||||||  ||||| |||||||| |    
T  35043678 atctaagcctattttcaaccaacttttctactttaggtactaccctcactctccctctaatggtgtcattcataatcctatcatgtctaatcttaccaat 35043777  T
Q  108 tatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccat 186  Q
     ||| || |||||||| ||||||||||||||||||||||| |||  || |||||||| |||| ||||||| |||||||||    
T  35043778 catccagcgcaacatcttcatctccgctacacttacttgactctcatgttggctcttaaccgtccaacactccgtaccat 35043857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 264
Target Start/End: Original strand, 6056032 - 6056264
Alignment:
Q  31 ttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatct 130  Q
    |||||||||||||||| | |||| |  ||||||||||| ||||||||| |||||  |||   ||||||||||||||| ||| |  ||||||||| ||| |    
T  6056032 ttttctactataggtgttaccccaa--ctctctctaatggtgtcattcttaatcacatcctttctagtcttaccactcatccaacgcaacatccgcattt 6056129  T
Q  131 ccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttcttt 229  Q
    |  |||| ||||||||||| | |||| || |||| ||| |||||||| ||||| |||| ||||| || |||||||| | |||||||||||| | | ||||    
T  6056130 ctactacgcttacttgattttcgtgttggttcttaaccacccaacactccgtatcatataacattgtcggtctgaccgttgtccgatagaattatccttt 6056229  T
Q  230 caacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||||| || || |||||||||||| |||||||    
T  6056230 caacttaaatgatattttcttatcgcataaaacac 6056264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 32755967 - 32755833
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttccccca--ttctctctctaattgtgtcattcctaatcctatctggtctagtcttacc 104  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||   |||||||||||| ||||||||||||||  ||||  |||||||||||||    
T  32755967 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgtcattcctaatattatcatgtctagtcttacc 32755868  T
Q  105 acttatcaagtgcaacatcctcatctccgctacac 139  Q
    ||| ||| |   ||||||||||||||| |||||||    
T  32755867 actcatccaacacaacatcctcatctctgctacac 32755833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 5080888 - 5080766
Alignment:
Q  20 tttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaa 119  Q
    ||||| ||||||||||||||||||||| | |||||| ||  |||||||| ||||||||||||||| |||   ||||| |||||||| ||||| || ||||    
T  5080888 tttctaccaacttttctactataggtgatacccccactcgttctctaatggtgtcattcctaatcttattatgtctaatcttaccagttatccagcgcaa 5080789  T
Q  120 catcctcatctccgctacactta 142  Q
    ||||||||||||| |||||||||    
T  5080788 catcctcatctccactacactta 5080766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 30679344 - 30679260
Alignment:
Q  182 accatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||||||| || |||||||||| |||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  30679344 accatacaacatcgtcggtctgactgttgtctgatagaactttcctttcaacttatgtggtactttcttatcgctcaaaacacct 30679260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 9593998 - 9594078
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctac 137  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||||| ||| |  ||||||||||||||||||||||    
T  9593998 tctctctctaatggtgtcattcctaatcctatcccgtctagtcttaccactcatccaacgcaacatcctcatctccgctac 9594078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 21352069 - 21352175
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||||| ||||||||| |||| |||||||||||||||||| || |||  ||||||||||   ||| |||||||||||||||   ||||||||||    
T  21352069 aaatcatctaagcctattttctaccaatttttctactataggtgctacctcca--ctctctctaacgatgttattcctaatcctatcatatctagtctta 21352166  T
Q  103 ccacttatc 111  Q
    |||||||||    
T  21352167 ccacttatc 21352175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 12890626 - 12890556
Alignment:
Q  11 taagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattccta 81  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||    
T  12890626 taagcctattttctaccaacttttctactataggtgctacccccactctctccctaatggtgtcattccta 12890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 33496178 - 33496023
Alignment:
Q  59 tctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tg 157  Q
    ||||| |||| |||||||| |||||| ||||   | || |||||||| | ||| | ||||||||| ||||||||| |||||||||||||||||  || ||    
T  33496178 tctctgtaatggtgtcatttctaatcttatcctatttaatcttaccattcatccaatgcaacatcatcatctccgttacacttacttgattctcatgttg 33496079  T
Q  158 gctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtcc 213  Q
    | | || |||| ||||||| | |||||||||||||| | ||||||||||| |||||    
T  33496078 gtttttaaccgtccaacactctgtaccatacaacattgcaggtctgactgttgtcc 33496023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 28027071 - 28027248
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagt 115  Q
    ||||||||| |||  ||||||||||||||||| | ||||||||||| |||||    |||||||||||||||||    ||||||||||||||| ||| |      
T  28027071 ctattttctaccacattttctactataggtgc-taccccattctctatctaacgacgtcattcctaatcctatgccatctagtcttaccactcatccaac 28027169  T
Q  116 gcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacat 193  Q
      ||||||||| |||| ||||  |||||||||||||  || ||| |||| ||| |||||||| || |||||||||||||    
T  28027170 ataacatcctcgtctctgctatgcttacttgattctcatgttggttcttaacctcccaacactccataccatacaacat 28027248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 33084101 - 33083966
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||||||| ||||| ||| ||||||||| ||||||||| |||| | ||||||||||||   |||||| ||||| |||||   ||||||||||||||  |    
T  33084101 ctaagtctagtttctaccatcttttctaccataggtgctaccccaactctctctctaatatcgtcatttctaattctatcccatctagtcttaccacaca 33084002  T
Q  110 tcaagtgcaacatcctcatctccgctacacttactt 145  Q
    || |  ||| ||||||||| || ||||| |||||||    
T  33084001 tccaacgcagcatcctcatttctgctacgcttactt 33083966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 30679456 - 30679417
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactata 42  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  30679456 aaatcatctaagcctattttctaccaacttttctactata 30679417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 2689690 - 2689646
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgc 47  Q
    |||||||||||| ||||||||| | |||||||| |||||||||||    
T  2689690 aaatcatctaagcctattttctacaaacttttcaactataggtgc 2689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 33496018 - 33495986
Alignment:
Q  231 aacttaagtggtactttcttatcgcacaaaaca 263  Q
    ||||||||||||||||||||||| |||||||||    
T  33496018 aacttaagtggtactttcttatcacacaaaaca 33495986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 6e-77; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 3301890 - 3301635
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||| ||| ||| || |||||||||||| ||| ||||||||||||||||  |||||||||||||||    
T  3301890 catctaagcctattttctaccaacttttctactataggggctaccctcactctctctctaatggtgacattcctaatcctatcatgtctagtcttaccac 3301791  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgact 206  Q
    | |||||| ||||||||| ||||||||||||||||||||   || ||| |||||||| ||||||||||||  ||||||||||||||| ||  ||||||||    
T  3301790 tcatcaagcgcaacatccccatctccgctacacttactt---tcgtgt-tggctcttaaccgcccaacacttcgtaccatacaacattgtcagtctgact 3301695  T
Q  207 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
     ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  3301694 actgtccgatagaactttcctttcaatttaagtggtactttcttatcgcacaaaacacct 3301635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 12492620 - 12492883
Alignment:
Q  7 catctaagtctattttctcccaacttttctactatag---gtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttac 103  Q
    |||||||| ||||||||| ||||||||||||||||||   ||||| |||||| |||||||||||| ||||||||||||||| ||||  ||||||||||||    
T  12492620 catctaagcctattttctaccaacttttctactatagtaggtgctacccccactctctctctaatggtgtcattcctaatcttatcctgtctagtcttac 12492719  T
Q  104 cacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtct 202  Q
    |||| ||| |  | |||||||||||||| |||||||||||||||||||  ||| | ||||| |||||||||||| ||||||||||||||| ||  ||||     
T  12492720 cactcatccaacgtaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaaagccggtcg 12492819  T
Q  203 gactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  12492820 gactgctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacct 12492883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 1275310 - 1275051
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||| | |||||||||||| |||||||||||||||||| |  |||||||||||||||    
T  1275310 catctaagcctattttctaccaacttttctactataggtgctacccc-actctctctctaatggtgtcattcctaatcctaccatgtctagtcttaccac 1275212  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| ||||  |||||||||||||  ||| | ||| | |||||||||||| |||||||||||||||  |  ||||||||    
T  1275211 tcatccaacgcaacatcctcatctctgctatgcttacttgattctcatgttgactcgtaaccgcccaacactccgtaccatacaacaacgccggtctgac 1275112  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1275111 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 1275051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 2075710 - 2075970
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||| ||| |||||||||||||| |||||| | |||||| ||||||||||||  |||||||||||||||||||| |||||||||||| ||    
T  2075710 catctaagcctattgtctaccaacttttctactgtaggtgttacccccactctctctctaatgttgtcattcctaatcctatcttgtctagtcttacaac 2075809  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| ||||||||||||| |||||  || || ||||| |||||||||||| |||||||||||||||  |  |||| |||    
T  2075810 tcatccaacgcaacatcctcatctctgctacacttacttaattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggac 2075909  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  2075910 tgctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacct 2075970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 6 - 267
Target Start/End: Complemental strand, 10639351 - 10639082
Alignment:
Q  6 tcatctaagtctattttctcccaacttttctactatag-------gtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagt 98  Q
    ||||||||| ||||||||| ||||||||||||||||||       |||||  ||||| |||||||||||| |||||||||||||||||||   |||||||    
T  10639351 tcatctaagcctattttctaccaacttttctactatagtctataggtgctagccccactctctctctaatggtgtcattcctaatcctattctgtctagt 10639252  T
Q  99 cttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagta 197  Q
    ||||||||| ||| |  |||||||||||||||| |||||||||||||||||||  ||| | ||||| |||||||||||| |||||||||||||||  ||     
T  10639251 cttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttcaccgcccaacactccgtaccatacaacaacgtc 10639152  T
Q  198 ggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacaccta 267  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10639151 ggtcggactgctgttcgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacaccta 10639082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 7 - 265
Target Start/End: Original strand, 28977095 - 28977352
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||   |||||| |||||||    
T  28977095 catctaagcctattttctaccaacttttctactataggtgctaccccca--ctctctctaatggtgtcattcctaatcctatcatttctagttttaccac 28977192  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |   |||||| |||||||| |||||||||||||||||||  ||| | ||||| |||||||||||| |||||||||||||||  || | || |||    
T  28977193 tcatccaacacaacatactcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgtcgttcggac 28977292  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacc 265  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28977293 tgatgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacc 28977352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 260
Target Start/End: Original strand, 16347614 - 16347868
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||  |||||||||||| || |||||  ||||| ||| | |||||||||||||||    
T  16347614 catctaagcctattttctaccaacttttctactataggtgctacccccgctctctctctaatggtttcatttttaatcatatattgtctagtcttaccac 16347713  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||||||||||||||||| | ||| ||| |||||||| ||||| |||||| ||||||||||||| || || |||||||     
T  16347714 tcatccaacgcaacatcctcatctccgctacacttacttaactctcgtgttggctcttaaccgctcaacactccgtaccatacaatatcgtcggtctgag 16347813  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaa 260  Q
    || |||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  16347814 tgttgtccgatagaactttcctttcaacttaagtggtaatttcttattgcacaaa 16347868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 1287815 - 1288083
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctc----------tctctaattgtgtcattcctaatcctatctggtcta 96  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||          ||||||||  |||||||||||||||||||  |||||    
T  1287815 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctctctctctaatgatgtcattcctaatcctatcatgtcta 1287914  T
Q  97 gtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatag 195  Q
    ||||||||||| ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |    
T  1287915 gtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacg 1288014  T
Q  196 taggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
      | || ||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  1288015 ccgatcggactgctgttcgatagaactttcctttcaacttaaatggtactttcttatcgcacaaaacac 1288083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 34273073 - 34272808
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct----------aattgtgtcattcctaatcctatctggtcta 96  Q
    |||||||| ||||||||| |||||||||||| |||||||||| |||||| |||||||||          ||| |||||||||||||||||     |||||    
T  34273073 catctaagcctattttctaccaacttttctattataggtgctacccccactctctctctctctctctctaatggtgtcattcctaatcct-----gtcta 34272979  T
Q  97 gtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatag 195  Q
    ||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||  | | | ||||| |||||||||||| |||||||||||||||  |    
T  34272978 gtcttaccactcatccaatgcaacatcctcatctctgctacacttacttgattctcatattgactcttaaccgcccaacactccgtaccatacaacaacg 34272879  T
Q  196 taggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    | || | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34272878 tcggccggactgctgtccgattgaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 34272808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 24178556 - 24178312
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||  || ||||||||||||    
T  24178556 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcttaatcctatcatgtatagtcttaccac 24178457  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||           |||||   || ||||||||    
T  24178456 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaaca-----------acaac---gtcggtctgac 24178371  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24178370 tgctgcccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacac 24178312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 20318985 - 20318777
Alignment:
Q  50 cccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgatt 149  Q
    |||||| ||| |||||||| ||||||||||||||||||||      |||||||||||| ||| |  |||||||||||||||| |||||||||||||||||    
T  20318985 cccccactctttctctaatggtgtcattcctaatcctatcc-----agtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgatt 20318891  T
Q  150 cttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttc 248  Q
    ||  ||| | ||||| ||||| |||||| |||||||||||||||  |  |||| ||||||| ||||||| |||||| ||||||||||||||||||    |    
T  20318890 ctcatgttgactcttaaccgcgcaacactccgtaccatacaacaacgccggtcggactgctatccgatataactttcctttcaacttaagtggta----c 20318795  T
Q  249 ttatcgcacaaaacacct 266  Q
    ||||||||||||||||||    
T  20318794 ttatcgcacaaaacacct 20318777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 30 - 253
Target Start/End: Complemental strand, 27916 - 27693
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatc 129  Q
    ||||||||||||||||||| |||  | ||| | || ||| ||||||||| ||||| ||||| || |||| |||||||| ||| | |||||||||||||||    
T  27916 cttttctactataggtgctaccctaactctttttcaaatggtgtcattcataatcatatcttgt-tagttttaccactcatctaatgcaacatcctcatc 27818  T
Q  130 tccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctt 228  Q
    |||| ||  ||||||| |||||  ||| || |||| |||||||||||| |||||||||||||||| ||  ||| ||||  |||| ||||||| ||| |||    
T  27817 tccgttatgcttacttaattctcatgttggttcttaaccgcccaacactccgtaccatacaacatcgtctgtccgactattgtcagatagaattttcctt 27718  T
Q  229 tcaacttaagtggtactttcttatc 253  Q
    |||||||||||||||||||||||||    
T  27717 tcaacttaagtggtactttcttatc 27693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 4496430 - 4496308
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctat-ctg-gtctagtcttacc 104  Q
    |||||||| ||||||||| ||| ||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  4496430 catctaagcctattttctaccagcttttctactataggtgctacccccactctctctctaaaggtgtcattcctaatcctatcctgtgtctagtcttacc 4496331  T
Q  105 acttatcaagtgcaacatcctca 127  Q
    ||| ||| |  ||||||||||||    
T  4496330 actcatccaacgcaacatcctca 4496308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 38685013 - 38684932
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctat 88  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  38685013 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctat 38684932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 3394587 - 3394496
Alignment:
Q  178 ccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttct---ttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||| ||||||||| |  ||||||||||||||||||||||||||| ||   |||| ||||||||||||||||||||||||||||||||||    
T  3394587 ccgtactatacaacattgccggtctgactgctgtccgatagaactttcctcctttcagcttaagtggtactttcttatcgcacaaaacacct 3394496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 26884927 - 26885025
Alignment:
Q  10 ctaagtctattttctcccaacttttc-tactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||| ||||||||| |||||||||| | ||||||||||| ||| || ||||| |||||| |||| |||||||||||||||  ||||||| ||||||||    
T  26884927 ctaagcctattttctaccaacttttcctgctataggtgctaccctcactctctttctaatggtgttattcctaatcctatcccgtctagttttaccact 26885025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 14665760 - 14665658
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttccccca----ttctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||| |||||||||  |||||| ||||||||||||||| ||||||     |||||||||||| |||||||| |||||||||||  |||||| ||||    
T  14665760 catctaagcctattttctatcaacttctctactataggtgctacccccactctctctctctctaatggtgtcatttctaatcctatcatgtctaggctta 14665661  T
Q  103 cca 105  Q
    |||    
T  14665660 cca 14665658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 15168829 - 15168744
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctt 101  Q
    ||||||||| ||| ||||||||||||||||||| |||||   ||| ||||||| ||||||||| ||||||||||| ||||| ||||    
T  15168829 ctattttctaccatcttttctactataggtgctaccccccaactccctctaatggtgtcattcttaatcctatctcgtctaatctt 15168744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 10082979 - 10083109
Alignment:
Q  11 taagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttat 110  Q
    |||||||| ||||| ||| ||||||||||||||||| | |||| || ||||| |||||  | ||||| ||||| |||||  |||||||||||||||  ||    
T  10082979 taagtctagtttctaccatcttttctactataggtgataccccaatgctctccctaatgttctcatttctaattctatcccgtctagtcttaccacacat 10083078  T
Q  111 caagtgcaacatcctcatctccgctacactta 142  Q
    |||  |||||||||||||| | ||||| ||||    
T  10083079 caa-agcaacatcctcatccctgctacgctta 10083109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 14749353 - 14749270
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatct 90  Q
    |||||||||||| ||||| |||| |||||||||||||||||| | || | ||||||||||||  | ||||| ||||||||||||    
T  14749353 catctaagtctagtttctaccaatttttctactataggtgctacaccaactctctctctaatgttttcatttctaatcctatct 14749270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 31636159 - 31636319
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||||||| ||||| ||| ||||||||||||||||||| |||| |  || ||||||||  |||||||  |||| |||||  |||||||||||||||  |    
T  31636159 ctaagtctagtttctaccatcttttctactataggtgctaccccaa--ctttctctaatgctgtcatttataattctatccagtctagtcttaccacaaa 31636256  T
Q  110 tcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaaca 175  Q
    || |    |||||| ||||||| ||||| | || || ||| ||||| ||| ||||||||||||||||    
T  31636257 tcca----aacatcatcatctctgctacgcataatttatttttgtgttggttctttaccgcccaaca 31636319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 20456819 - 20456778
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgct 48  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  20456819 catctaagcctattttctaccaacttttctactataggtgct 20456778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 11002662 - 11002786
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||||||| ||||| |||  ||||||||| |||||||| |||  |  |||||||||||  ||||||| ||||| |||||   ||| ||||||||||  |    
T  11002662 ctaagtctagtttctaccatgttttctactgtaggtgctacccgaa--ctctctctaatgttgtcatttctaattctatcccatctcgtcttaccacaca 11002759  T
Q  110 tcaagtgcaacatcctcatctccgcta 136  Q
    || || |||||||||||||||| ||||    
T  11002760 tccagcgcaacatcctcatctctgcta 11002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 14667806 - 14667751
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct 65  Q
    ||||||||||||||  ||| ||||||||||||||||||| |||| | |||||||||    
T  14667806 ctaagtctattttccaccatcttttctactataggtgctaccccaactctctctct 14667751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 28186956 - 28187028
Alignment:
Q  59 tctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctc 131  Q
    ||||||||||  ||||||| ||||||||| |  |||||||||||||||  ||| | |||||||| ||||||||    
T  28186956 tctctctaatgttgtcatttctaatcctaccatgtctagtcttaccacacatccaatgcaacattctcatctc 28187028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 36200764 - 36200684
Alignment:
Q  71 tgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattct 151  Q
    |||||||||||||| ||||   | |||||||||| || ||| |  |||||||||||||||| | ||| |||||||||||||    
T  36200764 tgtcattcctaatcttatcctatttagtcttaccgctcatccaacgcaacatcctcatctctgatacgcttacttgattct 36200684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 52138846 - 52138586
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  52138846 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 52138747  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgt-gtggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||| |||||||||||||||||||  |  || ||||| ||||||||||||  ||||||||||||||  |  |||| |||    
T  52138746 tcatccaacgcaacatcctcatctctgctacacttacttgattctcatcttgactcttaaccgcccaacacttcgtaccatacaacaacgccggtcggac 52138647  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  52138646 tgctgtccgatagaactttcctttcaacttaagtggtattttcttatcgcacaagacacct 52138586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 263
Target Start/End: Complemental strand, 28245483 - 28245226
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||  |||||||||||||||||||  | |||||||||||||    
T  28245483 catctaagtctattttctaccaacttttctactataggtgctacccccactctctctctaatgatgtcattcctaatcctatccaggctagtcttaccac 28245384  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||  ||||||||||||| |||||  || || || || |||||||||||| ||||||| |||||||  |  ||||||||    
T  28245383 tcatccaacgcaacatcctcatctttgctacacttacttaattctcatgttgacttttaaccgcccaacactccgtaccgtacaacaacgccggtctgac 28245284  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaaca 263  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28245283 tgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaaca 28245226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 8 - 265
Target Start/End: Original strand, 51447947 - 51448204
Alignment:
Q  8 atctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||  | |||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  51447947 atctaagcctattttctaccaacttttctactataggtgctaccct-actctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccact 51448045  T
Q  108 tatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgact 206  Q
     ||| |  |||||||||||||||| |||||||||| ||||||||  ||| | ||||| |||||| ||||| |||||||||||||||  || |||| ||||    
T  51448046 catccaacgcaacatcctcatctctgctacacttagttgattctcatgttgactcttaaccgcctaacactccgtaccatacaacaacgtcggtcggact 51448145  T
Q  207 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacc 265  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  51448146 gctgtccgatataactttcctttcaacttaagtggtactttcttatcgcacaaaacacc 51448204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 5168878 - 5168614
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttccccca----ttctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    ||||||||  |||||||| ||||||||||||| ||||||||| ||||||     |||||||||||| ||||||||||||||||||||  |||||||||||    
T  5168878 catctaagcgtattttctaccaacttttctaccataggtgctacccccactctctctctctctaatggtgtcattcctaatcctatcctgtctagtctta 5168779  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    ||  | ||| || |||||||||||||||||||||||||||||| | |||  || |||||||| |||||||| ||| |||||||||||||||| |  ||||    
T  5168778 cctatcatccagcgcaacatcctcatctccgctacacttactttactctcatgttggctcttaaccgcccagcactccgtaccatacaacattgccggtc 5168679  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||    
T  5168678 tgactgttgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacct 5168614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 25191423 - 25191165
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||  |||  |||||||| ||||| ||||  |||||||||||||||    
T  25191423 catctaagtctattttcttccaatttttctactataggtgctacccccattctctct--aatgatgtcattcttaatcatatcatgtctagtcttaccac 25191326  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||||||||||| ||||||||||||| | ||| |||| | ||||| || ||||||||| | ||||||||||||||    ||||||||    
T  25191325 tcatccagcgcaacatcctcatctctgctacacttactttactctcgtgttgactcttaacagcccaacactctgtaccatacaacatttccggtctgac 25191226  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |  ||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  25191225 tattgttcgatagaaccttcctttcaacttaagtggtactttcttatcgcacaaaacacct 25191165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 54279064 - 54278850
Alignment:
Q  9 tctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactt 108  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||| | |||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  54279064 tctaagcctattttctaccaacttttctactataggtgctacccctactctctctctaatggtgtcattcctaattctatcttgtctagtcttaccactt 54278965  T
Q  109 atcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactg 207  Q
    ||| |  |||||||||||||||| ||||||||||| |||||||| || || ||||| || ||||||||| |||||||||||||||  |  ||||||||||    
T  54278964 atccaacgcaacatcctcatctctgctacacttacctgattcttatgttgactcttaactgcccaacactccgtaccatacaacaacgctggtctgactg 54278865  T
Q  208 ctgtccgatagaact 222  Q
    |||||||||||||||    
T  54278864 ctgtccgatagaact 54278850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 57 - 266
Target Start/End: Complemental strand, 38850090 - 38849880
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    ||||||||| ||  |||||||||||||| ||||  |||||||||||| ||| ||| || |||||||||||||||| ||||||||||||||||||| ||||    
T  38850090 tctctctctcatgatgtcattcctaatcatatcatgtctagtcttactactcatccagcgcaacatcctcatctctgctacacttacttgattctcgtgt 38849991  T
Q  157 gg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgc 255  Q
     | ||||| ||||||||||||   |||||||||||||| || ||| |||||| ||||||||| ||  ||||||||||||||||||||||||| |||||||    
T  38849990 tgactcttaaccgcccaacactttgtaccatacaacatcgtcggtgtgactgttgtccgataaaaaatttctttcaacttaagtggtactttgttatcgc 38849891  T
Q  256 acaaaacacct 266  Q
    |||||||||||    
T  38849890 acaaaacacct 38849880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 53519638 - 53519372
Alignment:
Q  7 catctaagtctattttctcccaacttttctactata------ggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtct 100  Q
    |||||||| ||||||||| |||||||||||||||||      |||||| |||||| ||||| |||||| ||||||||| ||||||||||  ||||||| |    
T  53519638 catctaagcctattttctaccaacttttctactatatatataggtgctacccccactctctgtctaatggtgtcattcttaatcctatcctgtctagtat 53519539  T
Q  101 taccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtagg 199  Q
    ||||||| ||| |  ||||||||||||| ||||||||||| |||| | ||| ||| |||||||| |||||  ||||| |||||| | ||||||| |  |     
T  53519538 taccactcatccaacgcaacatcctcatttccgctacactaactttactctcgtgttggctcttaaccgcttaacactccgtacaacacaacattgccga 53519439  T
Q  200 tctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||||  ||| |||| | |||||||| |||||||||||||||||||||||||    
T  53519438 tctgactgctgtccgatagatttttcctttaagcttaagtgatactttcttatcgcacaaaacacct 53519372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 192
Target Start/End: Original strand, 33272258 - 33272450
Alignment:
Q  7 catctaagtctattttctcccaacttttctactata----ggtgcttcccccattctc--tctctaattgtgtcattcctaatcctatctggtctagtct 100  Q
    |||||||| ||||||||| |||||||||||||||||    |||||| |||||| ||||  |||||||| ||||||||| ||||||||||  |||||||||    
T  33272258 catctaagcctattttctaccaacttttctactatatataggtgctacccccactctctctctctaatggtgtcattcttaatcctatcatgtctagtct 33272357  T
Q  101 taccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaaca 192  Q
    ||||||| ||| | ||||||||||||||||| |||||||||||||||||||  || || ||||| || ||||||||| |||||||||||||||    
T  33272358 taccactcatccaatgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaactgcccaacactccgtaccatacaaca 33272450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 92 - 266
Target Start/End: Original strand, 47542033 - 47542207
Alignment:
Q  92 gtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaa 190  Q
    |||||||||||||||| ||| |  |||||||||||||||| ||||||||| ||| |||||  ||| | ||||| || ||||||||| |||||||||||||    
T  47542033 gtctagtcttaccactcatccaacgcaacatcctcatctctgctacactttctt-attctcatgttgactcttaactgcccaacactccgtaccatacaa 47542131  T
Q  191 catagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||  |  |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47542132 caacgccggtcagaccgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 47542207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 47233832 - 47233974
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || |||||||||||||||| |||||||| |||||| ||||  |||||||||||||||    
T  47233832 catctaagcctattttctaccaacttttctactataggtgctacctccattctctctctaatggtgtcatttctaatcttatcatgtctagtcttaccac 47233931  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgatt 149  Q
    | ||| |  |||| |||||||||| ||||||||||||| ||||    
T  47233932 tcatccaacgcaatatcctcatcttcgctacacttactagatt 47233974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 45728180 - 45728020
Alignment:
Q  20 tttctcccaacttttctactataggtgcttcccccattctctctctaattg-tgtcattcctaatcctatctggtctagtcttaccacttatcaagtgca 118  Q
    ||||| ||||||||||||||||| ||||| |||||| ||||||||||| || ||||||| |||||||||| | |||| ||||||||||| ||| || |||    
T  45728180 tttctaccaacttttctactatatgtgctacccccactctctctctaaatgatgtcatttctaatcctatttcgtctcgtcttaccactcatccagcgca 45728081  T
Q  119 acatcctcatctccgctacacttacttgattct--tgtgtggctctttaccgcccaacaca 177  Q
    ||||||||||||| |||||||||||||||||||  |||  ||||||| |||||||||||||    
T  45728080 acatcctcatctctgctacacttacttgattctcatgttgggctcttaaccgcccaacaca 45728020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 22118 - 21992
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| |||||| || ||||||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||  |||||||||||||||    
T  22118 catctaagcctattt-ctaccaacttttctactataggtgctacccccactctctctctaatggtgacattcctaatcctatcatgtctagtcttaccac 22020  T
Q  107 ttatcaagtgcaacatcctcatctccgc 134  Q
    | ||| || |||||||||||||||||||    
T  22019 tcatccagcgcaacatcctcatctccgc 21992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 27917616 - 27917360
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| |||||| || ||| ||||||||||||||||||| |||| |  || |||||||| | |||||||||||||  |||| |||||| ||||||||    
T  27917616 catctaagcctatttcctaccatcttttctactataggtgctaccccaa--ctttctctaatggggtcattcctaatcaaatctcgtctaggcttaccac 27917519  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttg-tgtggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |   ||||||||||||||| ||||| ||||||||||||| | | ||| |||| || || || |||   |||||||||||||| |  ||| ||||    
T  27917518 tcatccaacacaacatcctcatctctgctacgcttacttgattctcgttttggttcttaactgcacatcactttgtaccatacaacatcgccggtgtgac 27917419  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    || ||| |||||||| ||||| |||||||||||||||||||| ||||| || |||||||    
T  27917418 tgatgttcgatagaatttttcattcaacttaagtggtacttttttatcacataaaacac 27917360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 54128421 - 54128280
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||| ||||||||| ||| ||||||||||||||||||| |||| |  ||||||||||| ||||||||| ||||||||||  ||||||| |||||||| |    
T  54128421 ctaagcctattttctaccatcttttctactataggtgctaccccaacactctctctaatggtgtcattcataatcctatcgcgtctagttttaccactca 54128322  T
Q  110 tcaagtgcaacatcctcatctccgctacacttacttgattct 151  Q
    ||||  |||||||||||||||| ||||  |||||||||||||    
T  54128321 tcaaacgcaacatcctcatctctgctaagcttacttgattct 54128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 43695012 - 43695230
Alignment:
Q  18 attttctcccaacttttctactataggtgcttccccc-attctctctctaattgtgtcattcctaatcctatc-tg----gtctagtcttaccacttatc 111  Q
    ||||||| ||||||||||||||||||||||| ||||| | |||||||||      |||||||||||||||||| ||    |||| ||||||||| | |||    
T  43695012 attttctaccaacttttctactataggtgctaccccccactctctctct------gtcattcctaatcctatcatgtcatgtctggtcttaccattcatc 43695105  T
Q  112 aagtgcaacatcctcatctccgctacacttacttgattcttgtgtggct-ctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctg 210  Q
     |  |||||||||||||||| | ||||||||||||||||| ||||   | ||  ||| |||||||| |||||||||||||||| |  ||||| |||||||    
T  43695106 caacgcaacatcctcatctctgttacacttacttgattctcgtgttaattctcaaccacccaacactccgtaccatacaacatcgccggtctaactgctg 43695205  T
Q  211 tccgatagaacttttctttcaactt 235  Q
    |||||||||||||||||||||||||    
T  43695206 tccgatagaacttttctttcaactt 43695230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 49503793 - 49503937
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||| ||||||||| ||| ||||||||||||||||||| ||   | |||||||||||| |||||||||| |||||||||| |||||||||||||||| |    
T  49503793 ctaagcctattttctaccatcttttctactataggtgctacctgaactctctctctaatggtgtcattcccaatcctatctcgtctagtcttaccactca 49503892  T
Q  110 tcaagt-----gcaacatcctcatctccgctacacttacttgatt 149  Q
    || | |     |||||||||| |||||||||||||||||||||||    
T  49503893 tccaatccaacgcaacatccttatctccgctacacttacttgatt 49503937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 26490358 - 26490119
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||| ||||||||| ||| ||||||||||||||||||| || | |  |||| ||||||   |||||| |||||| ||||  |||| ||||||||||| |    
T  26490358 ctaagcctattttctaccatcttttctactataggtgctacctcaa--ctctgtctaatgacgtcattgctaatcatatcccgtcttgtcttaccactca 26490261  T
Q  110 tcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccat--acaacatagtaggtctgact 206  Q
    || |  ||||||||||||||||||||||||||||||||||||  || ||| |||| ||||||||||| | | ||||||  ||||||| |  |||||||||    
T  26490260 tccaacgcaacatcctcatctccgctacacttacttgattctcttgttggttcttaaccgcccaacata-cttaccatacacaacatcgccggtctgact 26490162  T
Q  207 gctgtccgatagaacttttctttcaacttaagtggtactttct 249  Q
    | ||||||||| || ||| |||| || ||||| |||| |||||    
T  26490161 gttgtccgatataattttcctttaaatttaagcggtattttct 26490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 253
Target Start/End: Complemental strand, 3186818 - 3186568
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||||| | ||||||||| |||||||| | |||||||||||| || ||| ||| ||  |||| ||||||||||||||| ||||  | | |||||||    
T  3186818 aaatcatcta-gcctattttctaccaactttcccactataggtgctaccaccactctttccataatggtgtcattcctaatcttatcccgccaagtctta 3186720  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtc 201  Q
    || || ||| |    || || ||||||| ||||||| |||||||||||| |||| | ||||| | ||||||||||    || |||||||||| || |||     
T  3186719 ccgctcatccaacataagattctcatctacgctacatttacttgattctcgtgttgactcttaatcgcccaacactatatatcatacaacatcgttggtg 3186620  T
Q  202 tgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatc 253  Q
     ||||| ||||||||| |||||| ||||||||||||||| ||||||||||||    
T  3186619 ggactgttgtccgatataactttcctttcaacttaagtgatactttcttatc 3186568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 48953695 - 48953818
Alignment:
Q  70 gtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccg 168  Q
    ||||||||| |||||||||||  || | ||||||| || ||| |  ||||||||||||||||||| ||||||||||| |||||||| ||| |||| | ||    
T  48953695 gtgtcattcttaatcctatctcatccaatcttaccgctcatccaacgcaacatcctcatctccgc-acacttacttgtttcttgtgttggatcttaaacg 48953793  T
Q  169 cccaacacaccgtaccatacaacat 193  Q
    |||||||| ||||| ||||||||||    
T  48953794 cccaacactccgtaacatacaacat 48953818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 344951 - 345117
Alignment:
Q  11 taagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttat 110  Q
    |||| |||||||||  || ||||||||||||| ||||| |||| | ||||||||||||    ||||| |||||||||||| |||||||||||||||  ||    
T  344951 taagcctattttctaacatcttttctactataagtgctaccccaactctctctctaatgtcatcatttctaatcctatctcgtctagtcttaccacaaat 345050  T
Q  111 caagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacac 176  Q
    | |    |||||||| || |||||||  ||||||| ||||||||| ||| |||| ||||| ||||||    
T  345051 ccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacac 345117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 263
Target Start/End: Complemental strand, 29817527 - 29817293
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatc 129  Q
    ||||||||||||||||||| | || ||||| | ||||   ||||||||||||||  ||||  ||| ||| ||  |||||||| |  ||||||||||||||    
T  29817527 cttttctactataggtgctacaccaattctatttctatcagtgtcattcctaattatatcatgtccagttttgtcacttatccaacgcaacatcctcatc 29817428  T
Q  130 tccgctacacttacttgattcttgtgtg-gctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctt 228  Q
    |  |||||||||  |||||| |||| |  | |||| ||| |  ||||| || ||  |||||||||  | ||||| |||| |||||| ||||| |||||||    
T  29817427 tttgctacacttgattgatttttgtattagttcttaaccacttaacactccatattatacaacattatcggtctaactgttgtccggtagaaattttctt 29817328  T
Q  229 tcaacttaagtggtactttcttatcgcacaaaaca 263  Q
    |||||||||| | |||||||||||| || ||||||    
T  29817327 tcaacttaagcgttactttcttatcacataaaaca 29817293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 35033188 - 35033131
Alignment:
Q  11 taagtctattttctcccaacttttctactataggtgcttcccccattctctctctaat 68  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||    
T  35033188 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaat 35033131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 50621647 - 50621731
Alignment:
Q  58 ctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacactta 142  Q
    |||||||||||  ||||||| |||||||||||     |||||||||||| |||||| |||||||| |||||||||||||||||||    
T  50621647 ctctctctaatgttgtcatttctaatcctatcattcatagtcttaccacatatcaaatgcaacattctcatctccgctacactta 50621731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 38060477 - 38060419
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct 65  Q
    |||||||| ||||||||| |||||||||||| |||||||||| |||||| |||||||||    
T  38060477 catctaagcctattttctaccaacttttctattataggtgctacccccactctctctct 38060419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 40674513 - 40674606
Alignment:
Q  170 ccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaaca 263  Q
    ||||||| |||||| ||||||||| || | |||| ||| | | |||||||| ||| ||||||||||||||| |||||||||||| || ||||||    
T  40674513 ccaacactccgtactatacaacattgttgatctgcctgatattcgatagaattttcctttcaacttaagtgatactttcttatcacataaaaca 40674606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 19737034 - 19736942
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttccccc-attctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||||||| ||| ||||||||||||||||||| ||||| | ||||||||||||  | ||| | |||||| ||||  ||||||||||||||||    
T  19737034 ctattttctaccatcttttctactataggtgctgcccccaactctctctctaatgatttcacttctaatcgtatcccgtctagtcttaccact 19736942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 19757937 - 19757845
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttccccc-attctctctctaattgtgtcattcctaatcctatctggtctagtcttaccact 107  Q
    ||||||||| ||| ||||||||||||||||||| ||||| | ||||||||||||  | ||| | |||||| ||||| || |||||||||||||    
T  19757937 ctattttctaccatcttttctactataggtgctgcccccaactctctctctaatgatttcacttctaatcgtatctcgtgtagtcttaccact 19757845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 48953654 - 48953697
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtg 46  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  48953654 aaatcatctaagtttattttctaccaacttttctactataggtg 48953697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 30345459 - 30345313
Alignment:
Q  117 caacatcctcatctccgctacacttacttgattcttgtgtggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgat 216  Q
    |||||||||||||||||||| ||||| ||  ||| ||| ||| |||| |||||||| ||| |||||| ||| ||||| ||   ||||| |   ||| | |    
T  30345459 caacatcctcatctccgctatacttaatt--ttcatgt-tggttcttaaccgcccatcactccgtacaatataacatcgtcaatctgattttcgtctggt 30345363  T
Q  217 agaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||| ||| ||||||| ||||| ||||||||||||||||| |||||||||    
T  30345362 agaattttcctttcaatttaagcggtactttcttatcgcataaaacacct 30345313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 38850166 - 38850125
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgct 48  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  38850166 catctaagtctattttctaccaacttttctactatatgtgct 38850125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 45236850 - 45236753
Alignment:
Q  59 tctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    |||||||||| |||||||| |||||| ||||  |||||||||||||||  ||| |  |||||||||| ||||| ||||  ||||||| ||||| ||||    
T  45236850 tctctctaatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgt 45236753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 46568112 - 46568027
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacactta 142  Q
    ||||||||||||  ||||||| ||||| | |||||||||||||||| |||  ||| |   ||||||||||||||| ||||||||||    
T  46568112 tctctctctaatgttgtcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcctcatctctgctacactta 46568027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 39600940 - 39601016
Alignment:
Q  30 cttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||||||||||| || |||| | ||||||||||||  ||||||| |||||| ||||   ||||||||||||||    
T  39600940 cttttctactataggtactaccccaactctctctctaatgttgtcatttctaatcttatcccatctagtcttaccac 39601016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 19676376 - 19676447
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcat 128  Q
    |||||||||||| |||||| |||||||| ||||   |||||||||||| || ||| | ||||||||||||||    
T  19676376 tctctctctaatggtgtcactcctaatcttatcccatctagtcttaccgctcatccaatgcaacatcctcat 19676447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 54425349 - 54425400
Alignment:
Q  213 cgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    ||||| || ||| ||| |||||||||||||||||||||||| ||||||||||    
T  54425349 cgataaaattttccttccaacttaagtggtactttcttatcacacaaaacac 54425400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36820191 - 36820294
Alignment:
Q  1 ctaaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtct 100  Q
    ||||| || ||||| ||| ||||  ||| |||| ||| |||||||||| |||| |  |||||||||||   |||||| |||||||||||| |||||||||    
T  36820191 ctaaaccacctaagcctagtttccaccatctttgctaatataggtgctaccccaa--ctctctctaatgtcgtcatttctaatcctatctcgtctagtct 36820288  T
Q  101 taccac 106  Q
    ||||||    
T  36820289 taccac 36820294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 2341003 - 2341075
Alignment:
Q  60 ctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctcc 132  Q
    |||||||||  | ||||| ||||| |||||  |||||||||||||||  ||| | ||||||||||||||||||    
T  2341003 ctctctaatgttttcatttctaattctatcatgtctagtcttaccacacatccaatgcaacatcctcatctcc 2341075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 7 - 262
Target Start/End: Complemental strand, 8180826 - 8180570
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||||  |||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  8180826 catctaagcttattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 8180727  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |   ||||||||||||||| |||||||||||||||||||  || || ||||| |||| ||||||| |||||||||||||||  |  ||||||||    
T  8180726 tcatccaacacaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgtccaacactccgtaccatacaacaacgctggtctgac 8180627  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaac 262  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8180626 tgatgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaac 8180570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 41197464 - 41197724
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||||||||||| |||||||||| ||| || ||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  41197464 catctaagcctattttctaccaacttttctattataggtgctaccctcactctatctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 41197563  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||||||||||||||||||||||||| | ||| ||| |||||||| ||||||||||||   |||||||||||||| |  ||||||||    
T  41197564 tcatctagcgcaacatcctcatctccgctacacttactttactctcgtgttggctcttaaccgcccaacactttgtaccatacaacattgctggtctgac 41197663  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || ||| |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  41197664 tgttgttcgatagaactttcctttcagcttaagtggtacttttttatcgcacaaaacacct 41197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 263
Target Start/End: Complemental strand, 3866118 - 3865861
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||| ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||  |||||||||||||||    
T  3866118 catctaagcctattttctaccaacttttttactataggtgctacccccactctctctccaatggtgtcattcctaatcctatcatgtctagtcttaccac 3866019  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||| ||||||| |||||||||||||||||||  || || ||||| |||| ||||||| |||||||||||||||  || ||||||||    
T  3866018 tcatccaacgcaacatcatcatctctgctacacttacttgattctcatgttgactcttaaccgtccaacactccgtaccatacaacaacgtcggtctgac 3865919  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaaca 263  Q
    || |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  3865918 tgttgtccgatagaactttcctttcaacttaagtagtactttcttatcacacaaaaca 3865861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 11992344 - 11992602
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||||  |||||||| ||||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||| ||||  ||||||| |||||||    
T  11992344 catctaagcttattttctaccaacttttctactataggtgctaccctca--ctctctctaatggtgtcattcctaatcttatcatgtctagtattaccac 11992441  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||||||||||||||||||||||||| | ||| |||| | ||||| |||||||| ||| |||||||||||||||| |  |||| |||    
T  11992442 tcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttgactcttaaccgcccatcactccgtaccatacaacattgccggtcagac 11992541  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11992542 tgctgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacct 11992602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 10 - 266
Target Start/End: Original strand, 41763281 - 41763537
Alignment:
Q  10 ctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactta 109  Q
    ||||| ||||||||| ||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| |    
T  41763281 ctaagcctattttctaccaacttttctactataggtg-ttaccccactctctctctaatggtgtcattcctaatcctatcttgtctagtcttaccactca 41763379  T
Q  110 tcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgc 208  Q
    || |  |||||||||||||||||||||||||||||| | ||| ||| ||| |||| |||||||||||| | |||||||||||||| |  ||||||| ||     
T  41763380 tccatcgcaacatcctcatctccgctacacttactttactctcgtgttggttcttaaccgcccaacactctgtaccatacaacattgccggtctgattgt 41763479  T
Q  209 tgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    | | |||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  41763480 tcttcgatagaactttccttttagcttaagtggtactttcttatcgcacaaaacacct 41763537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 45367861 - 45368120
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||||  |||||||| ||||||||||||||||||||||| |||||   ||||||||||| ||||||||| ||||||||||| ||||||||||||||     
T  45367861 catctaaggttattttctaccaacttttctactataggtgctacccccca-ctctctctaatggtgtcattcttaatcctatcttgtctagtcttaccat 45367959  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||| ||||||||| || |||||||| | ||| |||| ||||||| | |||||| ||| ||||||| |||||||| || ||||||||    
T  45367960 tcatccagcgcaacatcatcatctccgttatacttactttactctcgtgttggctcttaatcgcccagcactccgtaccttacaacattgtcggtctgac 45368059  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  45368060 tgttgtccgataaaactttcctttcagcttaagtggtactttcttatcgcacaaaacacct 45368120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 36183487 - 36183264
Alignment:
Q  17 tattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtg 116  Q
    |||||||| ||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||  |||||||||||||||| ||| |  |    
T  36183487 tattttctaccaacttttctactataggtgctacccctactctctctctaattgtgtcattcctaatcctatcatgtctagtcttaccactcatccaacg 36183388  T
Q  117 caacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccga 215  Q
    ||||||||||||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||||||||||  |  |||| ||||| |||||||    
T  36183387 caacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtaccatacaacaacgccggtcggactgttgtccga 36183288  T
Q  216 tagaacttttctttcaacttaagt 239  Q
    ||||||||| ||||||||||||||    
T  36183287 tagaactttcctttcaacttaagt 36183264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 38429930 - 38429707
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  38429930 catctaagcctattttctaccaacttttctactataggtgctgcccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 38429831  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||||||||||||||||||||||  | ||| ||| ||| |||| |||||||||||| |||||||||||||||| |  ||| ||||    
T  38429830 tcatccaacgcaacatcctcatctccgctacacttactctactctcgtgttggttcttaaccgcccaacactccgtaccatacaacattgccggtttgac 38429731  T
Q  206 tgctgtccgatagaacttttcttt 229  Q
    ||||||| ||||||||||| ||||    
T  38429730 tgctgtctgatagaactttccttt 38429707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 57 - 266
Target Start/End: Complemental strand, 2610524 - 2610314
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    |||||||||||| ||||||||||||||||| ||  |||||||||||||||| ||| |  ||| |||||||||||| |||||||||||||||||||  |||    
T  2610524 tctctctctaatggtgtcattcctaatcctgtcctgtctagtcttaccactcatccaacgcagcatcctcatctctgctacacttacttgattctcatgt 2610425  T
Q  157 gg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgc 255  Q
     | ||||| |||||||||||| |||||||||||||||  |   ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  2610424 tgactcttaaccgcccaacactccgtaccatacaacaacgccagtctgactgttgtccgatagaactttcctttcaacttaagtggtactttcttatcgc 2610325  T
Q  256 acaaaacacct 266  Q
    | |||||||||    
T  2610324 ataaaacacct 2610314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 23997660 - 23997403
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||| |||||||   |||||||| | |||| ||| |||||||| |||||||||||||||| |||  |||||||||||||||    
T  23997660 catctaaggctattttctaccaaattttcta---taggtgctacacccactctatctctaatggtgtcattcctaatccgatcatgtctagtcttaccac 23997564  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| || |||||||| ||||||||| ||||||||||||  ||| |||| | ||||| || |||||||||  ||||||||||||||| || ||||| ||    
T  23997563 tcatccagcgcaacatcttcatctccgttacacttacttggctctcgtgttgactcttaactgcccaacacttcgtaccatacaacattgtcggtcttac 23997464  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    || |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||    
T  23997463 tgttgtccgatagaactttcctttcagcttaagtggtattttctcatcgcacaaaacacct 23997403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 266
Target Start/End: Original strand, 3243889 - 3244147
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||   |||||||| ||||||||||||| ||||||  ||||||||||| ||||||||| ||||||||||  || ||||||||| ||    
T  3243889 catctaagcctattttccatcaacttttttactataggtgctaccccca--ctctctctaatggtgtcattcataatcctatcatgtgtagtcttactac 3243986  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||| ||||| |||||||||||||||||||  ||| | ||||| || | ||||||| ||||||||| |||||  |  |||| |||    
T  3243987 tcatccaacgcaacatccttatctctgctacacttacttgattctcatgttgactcttaactgtccaacactccgtaccattcaacaacgccggtcggac 3244086  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  3244087 tgctgtccgatagaactttcctttcaacataagtggtactttcttatcgcacaaaacacct 3244147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 79 - 266
Target Start/End: Original strand, 451930 - 452118
Alignment:
Q  79 ctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacaca 177  Q
    |||||||||||  |||||||||||||||| ||| |  ||||||| |||||||| |||||||||||||||||||  ||| | ||||| ||||||||||||     
T  451930 ctaatcctatcatgtctagtcttaccactcatctaacgcaacatactcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacact 452029  T
Q  178 ccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||||||||||  || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  452030 ccgtaccatacaacaacgtcggtcggactgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 452118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 4807629 - 4807378
Alignment:
Q  20 tttctcccaacttttctactataggtgcttcccccattctctctct----aattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagt 115  Q
    ||||| ||||||||||||||||||||||| |||||| |||||||||    |||  |||||||| ||||||||||  ||||| |||||||| | ||| |      
T  4807629 tttctaccaacttttctactataggtgctacccccactctctctctctctaatgatgtcattcataatcctatcatgtctattcttaccattcatccaac 4807530  T
Q  116 gcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccg 214  Q
    |||||||||||||||| ||||||||||||| |||||  ||| | ||||| ||||| |||||| | ||  |||||||||  || |||| ||||||||||||    
T  4807529 gcaacatcctcatctctgctacacttacttaattctcatgttgactcttaaccgctcaacactctgtgtcatacaacaacgtcggtcggactgctgtccg 4807430  T
Q  215 atagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4807429 atagaactttcctttcaacttaaatggtactttcttatcgcacaaaacacct 4807378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 256
Target Start/End: Complemental strand, 12734745 - 12734502
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||| |||||||||||||||||| ||||||  ||||||||||| |||||||| |||||||||||  |||||||||||||||    
T  12734745 catctaagcctattttctaccaatttttctactataggtgctaccccca--ctctctctaatggtgtcatttctaatcctatcccgtctagtcttaccac 12734648  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| ||  |||||||||||||||| ||||||||    ||||||  ||| ||||||  |||||||||||| | |||||||||||||| |  ||| ||||    
T  12734647 tcatccagcacaacatcctcatctccactacactt----gattctcatgttggctctaaaccgcccaacactctgtaccatacaacatcgatggtttgac 12734552  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgca 256  Q
    || |||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  12734551 tgttgtc-gatagaactttcctttcaacttaagtggtactttcttgtcgca 12734502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 16097218 - 16097480
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattct----ctctctaattgtgtcattcctaatcctatctggtctagt 98  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||| |||||| |||    ||||||||  |||||||| |||||| ||||   ||||||    
T  16097218 aaatcatctaagcctattttctaccaacttttctattataggtgctacccccactctaactctctctaacggtgtcatttctaatcatatcccatctagt 16097317  T
Q  99 cttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctcttta----ccgcccaacacaccgtaccatacaacat 193  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||  || |||||||| |    ||| |||| |   ||||||||||||||     
T  16097318 cttaccactcatccagtgcaacatcctcatctccgctacacttacttgattctcatgttggctcttaaccgtccgtccaagatttcgtaccatacaacaa 16097417  T
Q  194 agtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgca 256  Q
        ||||||||||||||  ||||||||||| ||||||||||||||||||| |||||||||||    
T  16097418 cactggtctgactgctgtttgatagaactttcctttcaacttaagtggtaccttcttatcgca 16097480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 30743668 - 30743411
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||| |||| ||||| |||| |||||||| ||| ||||| |||| | |||||  ||||  ||| |||||| |||||||||  ||||||||||| |||    
T  30743668 catctaattctaatttctaccaatttttctaccataagtgctacccc-actctcttcctaacggtgacattcccaatcctatcccgtctagtcttagcac 30743570  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt-ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | |||| | ||||||||||||||||| | |||||||||||||||| |||| |||| || | |||| ||| | |||||||||||||||| || ||||||||    
T  30743569 tcatcatgcgcaacatcctcatctccacaacacttacttgattctcgtgttggcttttaatcgcctaactctccgtaccatacaacatcgtcggtctgac 30743470  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
     ||| |||| || |||||| |||||||||||||||||||||||||||| ||||||||||    
T  30743469 cgctatccggtaaaactttcctttcaacttaagtggtactttcttatcacacaaaacac 30743411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 264
Target Start/End: Original strand, 6238053 - 6238247
Alignment:
Q  70 gtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccg 168  Q
    |||||||||||||| |||||  ||||||||||||| || ||| || ||||||||||||  | |||| || ||| |||||||| |||| | ||||| |||     
T  6238053 gtgtcattcctaattctatcatgtctagtcttaccgctcatccagcgcaacatcctcacattcgctgcaattatttgattctcgtgttgactcttaacca 6238152  T
Q  169 cccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||||| |||||||||||||||| ||  |||| |||| |||||||||||| |||  ||||||||||||||||| ||| ||||| ||||||||||    
T  6238153 cccaacactccgtaccatacaacatcgtcagtctaactgttgtccgatagaattttcttttcaacttaagtggta-ttttttatcacacaaaacac 6238247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 264
Target Start/End: Original strand, 24583905 - 24584100
Alignment:
Q  70 gtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccg 168  Q
    ||||||||| ||||| ||||  || ||||||||||||| |||  |  ||||||| ||||||| ||||||||||||||||||| |||| | ||||| ||||    
T  24583905 gtgtcattcttaatcatatcatgtttagtcttaccactcatcccgcacaacatcttcatctctgctacacttacttgattctcgtgttgactcttaaccg 24584004  T
Q  169 cccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||||    |||||||||||||| || ||||||  | || ||  | ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  24584005 cccaacattttgtaccatacaacatcgtcggtctggatactatctaacagaacttttctttcaacttaagtggtattttcttttcgcacaaaacac 24584100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 38452921 - 38453057
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttccccca----ttctctctctaattgtgtcattcctaatcctatctggtctagtctta 102  Q
    |||||||| ||||||||| |||||||||||||||||| |||| ||||||     |||||||||||| |||||||||||||||||||   |||||||||||    
T  38452921 catctaagcctattttctaccaacttttctactatagatgctacccccactctctctctctctaatggtgtcattcctaatcctatgatgtctagtctta 38453020  T
Q  103 ccacttatcaagtgcaacatcctcatctccgctacac 139  Q
    ||||| ||| |  ||||||||||||| || |||||||    
T  38453021 ccactcatccaacgcaacatcctcatgtctgctacac 38453057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 38434992 - 38434866
Alignment:
Q  12 aagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatc 111  Q
    ||||||| ||||  ||| ||||||||||||||||||| |||| ||||||||||||||  ||||||| |||||| | ||| ||||||| |||||||  |||    
T  38434992 aagtctagtttccaccatcttttctactataggtgctaccccaattctctctctaatgttgtcatttctaatcttctctcgtctagttttaccacgcatc 38434893  T
Q  112 aagtgcaacatcctcatctccgctaca 138  Q
     | ||||||||||||||||||||||||    
T  38434892 caatgcaacatcctcatctccgctaca 38434866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 38453058 - 38453114
Alignment:
Q  208 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38453058 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacac 38453114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 25834727 - 25834650
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttccccca--ttctctctctaattgtgtcattcctaa 82  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||   |||||||||||| |||||||||||||    
T  25834727 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgtcattcctaa 25834650  T

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Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 18424613 - 18424711
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| |||||||||||||||||| |||| | ||||  ||||||||||| || |||||| ||||| ||||   ||||||||||||||    
T  18424613 catctaagcctattttctaccaacttttctactatagatgctacaccca--ctctctctaatggtatcattcttaatcatatcatatctagtcttaccac 18424710  T

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Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 2610634 - 2610576
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctct 65  Q
    |||||||| ||||||||| |||||||||| |||||||||||| |||||| |||||||||    
T  2610634 catctaagcctattttctaccaacttttccactataggtgctacccccactctctctct 2610576  T

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Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 7825354 - 7825260
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattct 151  Q
    |||||||||||| |||||||| |||||| ||||  |||||||||||||||  ||| |  |||||||||| ||||| ||||| ||||||| |||||    
T  7825354 tctctctctaatagtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgctacgcttactttattct 7825260  T

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Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 43752179 - 43752244
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaat 68  Q
    |||||| ||||| ||||||||| ||| ||||||||||||||||||| |||| | ||||||||||||    
T  43752179 aaatcacctaagcctattttctaccaccttttctactataggtgctaccccaactctctctctaat 43752244  T

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Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 43238329 - 43238377
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttccccca 55  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  43238329 catctaagcctattttctaccaacttttctactataggtgctaccccca 43238377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 1456169 - 1456095
Alignment:
Q  117 caacatcctcatctccgctacacttacttgattcttgtgtggctctttaccgcccaacacaccgtaccatacaaca 192  Q
    |||||||||||||||||||||||||| || |||||||| ||| ||||||||  ||||||| |||| ||||| ||||    
T  1456169 caacatcctcatctccgctacacttattttattcttgt-tggttctttaccttccaacactccgtcccatataaca 1456095  T

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Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 13149309 - 13149112
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg- 155  Q
    |||||||| ||| ||||||||||||||| ||||   | |||||||||||||| || |   ||||| ||||||||| | ||||||| ||||||| | |||     
T  13149309 tctctctcaaatggtgtcattcctaatcttatcccttttagtcttaccacttgtccaacacaacaccctcatctctgttacacttgcttgattttcgtgt 13149210  T
Q  156 tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatc 253  Q
    ||| |||| ||| ||  |||| | ||||| |||||||| ||  | |||  || ||||| ||| || ||| |||| ||||| |||||||||||||||||    
T  13149209 tggttcttaaccacctgacactctgtaccgtacaacatcgttagcctggttgttgtccaatataattttccttttaacttgagtggtactttcttatc 13149112  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 40759095 - 40759014
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctaca 138  Q
    ||||||||||||  ||||||| |||||| ||||| ||||||||||||  |  ||| |||| |||||||||||||| ||||||    
T  40759095 tctctctctaatgttgtcatttctaatcttatcttgtctagtcttacaccacatctagtgaaacatcctcatctcagctaca 40759014  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 227359 - 227307
Alignment:
Q  16 ctattttctcccaacttttctactataggtgcttcccccattctctctctaat 68  Q
    ||||||||| | ||||||||||| ||||||||| |||||| ||||||||||||    
T  227359 ctattttctacaaacttttctaccataggtgctacccccactctctctctaat 227307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 233
Target Start/End: Complemental strand, 32443527 - 32443434
Alignment:
Q  140 ttacttgattcttgtgtggct-ctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaacttttctttcaac 233  Q
    |||||||||||| |||| | | ||| ||| |||||||| | |||||||||||||| || ||| |||||||| | |||||||| ||||||||||||    
T  32443527 ttacttgattctcgtgttgattcttaaccacccaacactctgtaccatacaacattgt-ggtttgactgctatacgatagaatttttctttcaac 32443434  T

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Target: scaffold0018 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 31514 - 31256
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||  |||||||||||||||    
T  31514 catctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcttatcctgtctagtcttaccac 31415  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgac 205  Q
    | ||| |  |||||||||| ||||| |||||||||||||||||||  || || ||||| ||| |||||||| ||||||| |||||||  |  ||||||||    
T  31414 tcatccaacgcaacatcctaatctctgctacacttacttgattctcatgttgactcttaaccacccaacactccgtaccgtacaacaccgccggtctgac 31315  T
Q  206 tgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31314 tgctgttcgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacac 31256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 264
Target Start/End: Original strand, 11828 - 12092
Alignment:
Q  3 aaatcatctaagtctattttctcccaacttttctactataggtgcttcccccatt--ctctctctaattgtgtcattcctaatcctatctggtctagtct 100  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |  |||||||| || |||||||||||||||||||   |||||||||    
T  11828 aaatcatctaagcctattttctaccaacttttctactataggtgctacccccactatctctctctgatggtgtcattcctaatcctattatgtctagtct 11927  T
Q  101 taccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtaccatacaacatagtagg 199  Q
    |||| || ||| || |||||||||||||||| ||||||| |||||||||||  || || |||||  ||||||||||    ||||||| |||||     |     
T  11928 taccgctcatccagcgcaacatcctcatctctgctacacatacttgattctcatgttgactcttacccgcccaacattttgtaccatgcaacaactccgt 12027  T
Q  200 tctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacac 264  Q
    ||||| ||||| |||||| |||||| |||| |||||||| |||||||||||||||||||||||||    
T  12028 tctgattgctgaccgataaaactttccttttaacttaagaggtactttcttatcgcacaaaacac 12092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 266
Target Start/End: Original strand, 2594 - 2766
Alignment:
Q  95 tagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgtgg-ctctttaccgcccaacacaccgtaccatacaacat 193  Q
    ||||||||||||| ||| | || |||||||||||||| ||||||||||||||||| |  ||| | ||||| |||||||||||| || ||||||||||||     
T  2594 tagtcttaccactcatccaatgaaacatcctcatctctgctacacttacttgattatcatgttgactcttaaccgcccaacactccataccatacaacaa 2693  T
Q  194 agtaggtctgactgctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
     ||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2694 cgtcagtctgactgctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacct 2766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 1184 - 1264
Alignment:
Q  7 catctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatc 89  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||| ||  ||||||||||| ||||||||| ||||||||||    
T  1184 catctaagcctattttctaccaacttttctactataggtgctaccctca--ctctctctaatggtgtcattcataatcctatc 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 25683 - 25859
Alignment:
Q  9 tctaagtctattttctcccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctggtctagtcttaccactt 108  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||     
T  25683 tctaagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactc 25782  T
Q  109 atcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtacc 184  Q
    ||| |   ||||||||| ||||| |||||||||||||||||||  || || ||||| |||||||||||| |||||||    
T  25783 atccaacacaacatcctaatctctgctacacttacttgattctcatgttgactcttaaccgcccaacactccgtacc 25859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 262
Target Start/End: Original strand, 86893 - 87101
Alignment:
Q  57 tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccacttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtgt 156  Q
    |||||||||||| |||||||| |||||| ||||   ||| ||||||||||| ||| || ||||||||||||||||| |||||||||||||| |||  |||    
T  86893 tctctctctaatggtgtcatttctaatcttatcctttctggtcttaccactcatccagcgcaacatcctcatctcctctacacttacttgagtctcatgt 86992  T
Q  157 -ggctctttaccgcccaacacaccgtaccatacaacatagtaggtctgactgctgtccgatagaactttt-----ctttcaacttaagtggtactttctt 250  Q
     ||||||| ||||||    |||| ||||||||||| || || |||||||||||||||| ||||| |||||      |||||||||||||| |||||||||    
T  86993 cggctcttaaccgcc---aacactgtaccatacaaaatcgttggtctgactgctgtccaatagagcttttttttcttttcaacttaagtgatactttctt 87089  T
Q  251 atcgcacaaaac 262  Q
    || ||| |||||    
T  87090 attgcataaaac 87101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 4508 - 4686
Alignment:
Q  8 atctaagtctattttctcccaacttttctactataggtgcttcccccat-tctctctctaattgtgtcattcctaatcctatctggtctagtcttaccac 106  Q
    ||||||| ||||||| | ||||||||||||||||||||||  ||||  | |||||||||||| ||||||||  ||||||||||  ||||||||||||||     
T  4508 atctaagcctattttttaccaacttttctactataggtgccaccccactctctctctctaatggtgtcatttataatcctatcatgtctagtcttaccat 4607  T
Q  107 ttatcaagtgcaacatcctcatctccgctacacttacttgattcttgtg-tggctctttaccgcccaacacaccgtacc 184  Q
    | ||| |  ||||||||||||| || | || | |||||||||||| ||| || ||| | |||| ||||||| |||||||    
T  4608 tcatccaacgcaacatcctcatatctgttaaatttacttgattctcgtgttgactcataaccgtccaacactccgtacc 4686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 29 - 81
Alignment:
Q  214 gatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacct 266  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  29 gatagaactttcctttcaacttaattggtactttcttatcgcacaaaacacct 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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