View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2314_low_6 (Length: 507)
Name: NF2314_low_6
Description: NF2314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2314_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 473; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 32566670 - 32567158
Alignment:
| Q |
1 |
tgtgtaatgtcaacatgtaagatcaaaattagttttacttaaatctaatatgaaccaatcatgtagagttatttattatatgtttaagattaaactcctc |
100 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32566670 |
tgtgtaatgtcaacatgtaagatcaacattagttttacttaaatctaatatgaaccaatcatgtagagttatttattatatgtttaagattaaactcctc |
32566769 |
T |
|
| Q |
101 |
taaagtgtccgagcagcaatgattttagaaaatagaagcaattgtatgtaatcacatgtgtcactgtcatgtgagtgtacgccgcaacacacagcagaca |
200 |
Q |
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|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32566770 |
taaagtgtccgagcagcaataattttagaaaatagaagcaattgtatgtaatcacatgtgtcactgtcatgtgagtgtacgccgcaacacacagcagaca |
32566869 |
T |
|
| Q |
201 |
ctttctcaatctaaagtatccgagctacataagtcaccactcatccgcattgtctctggtgtgaatttaataataaaaatagtgagtgtaagattgagat |
300 |
Q |
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|
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32566870 |
ctttctcagtctaaagtatctgagctacataagtcaccactcatccgcattgtctctggtgtgaatttaataataaaaatagtgagtgtaagattgagat |
32566969 |
T |
|
| Q |
301 |
taataccaaacgcaatttttctccagttctgattctagaattgggacgagaaaacttggactcatacggagttctaggcctgagttcccgaaccttgtcc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32566970 |
taataccaaacgcaatttttctccagttctgattctagaattgggacgagaaaacttggactcatacggagttctaggcctgagttcccgaaccttgtcc |
32567069 |
T |
|
| Q |
401 |
cactcctcacggctgagcattctcacagtaccttgaccttctggagcattctttatcctacgctccaacaactcttgggacctcgattc |
489 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
32567070 |
cactcctcacggctgagcattctcacagtaccttgaccttctggagcattctttatcctacgctccaacaactcttgggacctcgattc |
32567158 |
T |
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