View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2314_low_8 (Length: 497)
Name: NF2314_low_8
Description: NF2314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2314_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 12 - 480
Target Start/End: Original strand, 11312384 - 11312852
Alignment:
| Q |
12 |
aagaataatcatacctgtaccagcaatcaacagcttcatgattcaattttatgcaaatttgacaagcacttttactctcgttgatttgacgtggcttttc |
111 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
11312384 |
aagaataatcatacctgtaccagcaatcaacagcttcatgattcggttttctgcaaatttgacaagcacttttactctcgttgttttgacgtggcttttc |
11312483 |
T |
|
| Q |
112 |
tccctttgaactgtggttatgcttgacgaagacctcgttgttttgaggtccattatatcgacctactggagtaaaacctcttccttgagagttaaagtga |
211 |
Q |
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||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
11312484 |
tccctttgaactgtggttatgcttgacagagaactcgttgttttgaggtccattatatcgacctgctggagtaaaacctcttccttgagagttaaagtga |
11312583 |
T |
|
| Q |
212 |
cctctaccgccaagtccgcttcgacctcgacctcttcctctttgactaaagaaagcttgagcatgctctattaagctcttctcttcttccttttgggcat |
311 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11312584 |
cctctaccgccacgtccgcttcgacctcgacctcttcctctttgactaaagaaagcttgagcatgctctattaagctcttctcttcttccttttgggcat |
11312683 |
T |
|
| Q |
312 |
tttgtatctgctcatgtccttgaggagctaatagaaactgactgaatgaagggtaaggcggtttagtaagcatagcaacacgaaaagtttcatagcttgg |
411 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11312684 |
tttgtatctgctcatgtccttgaagagctaatagaaactgactgaatgaagggtaaggcggtttagtaagcatagcaacacgaaaagtttcatagcttgg |
11312783 |
T |
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| Q |
412 |
tccaagtccataagcaaattgaaacactttgtcttggtctgaaaccgtttcttttatagcagcaagatt |
480 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
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| T |
11312784 |
tccaagtccataagcaaattgaaacactttgtcttggtcagaaaccggttcttttatagcagcaagatt |
11312852 |
T |
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