View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2315_low_15 (Length: 216)

Name: NF2315_low_15
Description: NF2315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2315_low_15
NF2315_low_15
[»] scaffold0779 (1 HSPs)
scaffold0779 (1-57)||(107-163)
[»] chr3 (62 HSPs)
chr3 (1-57)||(13243524-13243580)
chr3 (1-54)||(23021979-23022032)
chr3 (1-54)||(29894711-29894764)
chr3 (1-54)||(50546525-50546578)
chr3 (1-52)||(3890824-3890875)
chr3 (4-54)||(31311722-31311772)
chr3 (1-54)||(2219930-2219983)
chr3 (1-54)||(8849806-8849859)
chr3 (1-54)||(11123599-11123652)
chr3 (1-54)||(18412071-18412124)
chr3 (1-54)||(27330167-27330220)
chr3 (1-54)||(40908443-40908496)
chr3 (1-54)||(41695968-41696021)
chr3 (1-54)||(47911005-47911058)
chr3 (1-54)||(52745708-52745761)
chr3 (1-54)||(4233154-4233207)
chr3 (1-54)||(18763868-18763921)
chr3 (1-54)||(22606799-22606852)
chr3 (1-54)||(30361695-30361748)
chr3 (1-50)||(37178295-37178344)
chr3 (1-50)||(37218221-37218270)
chr3 (1-54)||(38698763-38698816)
chr3 (1-54)||(41103678-41103731)
chr3 (1-54)||(44841278-44841331)
chr3 (1-54)||(50536008-50536061)
chr3 (1-54)||(50610551-50610604)
chr3 (1-54)||(53583658-53583711)
chr3 (4-54)||(37787217-37787267)
chr3 (1-54)||(51720913-51720967)
chr3 (1-54)||(45051791-45051843)
chr3 (1-45)||(22428992-22429036)
chr3 (1-52)||(45172670-45172721)
chr3 (1-54)||(4230900-4230953)
chr3 (1-54)||(30438319-30438372)
chr3 (1-54)||(42827943-42827996)
chr3 (1-54)||(55219836-55219889)
chr3 (1-45)||(8852265-8852309)
chr3 (1-45)||(11121126-11121170)
chr3 (1-45)||(15084686-15084730)
chr3 (6-55)||(16008675-16008726)
chr3 (1-45)||(16463803-16463847)
chr3 (1-45)||(30043606-30043650)
chr3 (1-45)||(37220221-37220265)
chr3 (1-45)||(37785333-37785377)
chr3 (1-41)||(41698210-41698250)
chr3 (1-45)||(44843313-44843357)
chr3 (1-45)||(50548609-50548653)
chr3 (1-45)||(53845180-53845224)
chr3 (1-40)||(27128137-27128176)
chr3 (1-54)||(55413127-55413181)
chr3 (1-46)||(37523089-37523134)
chr3 (1-55)||(45169869-45169925)
chr3 (1-45)||(2217925-2217969)
chr3 (1-45)||(6177326-6177370)
chr3 (1-45)||(13213340-13213384)
chr3 (1-45)||(18410106-18410150)
chr3 (1-45)||(22604765-22604809)
chr3 (1-45)||(27239177-27239221)
chr3 (1-45)||(27320906-27320950)
chr3 (1-45)||(38235393-38235437)
chr3 (1-41)||(53776453-53776493)
chr3 (1-45)||(53778423-53778467)
[»] chr7 (46 HSPs)
chr7 (1-54)||(46553487-46553540)
chr7 (1-54)||(21817324-21817377)
chr7 (1-54)||(40013675-40013728)
chr7 (1-54)||(44456949-44457002)
chr7 (1-54)||(44884726-44884779)
chr7 (3-54)||(241522-241573)
chr7 (1-54)||(3412728-3412781)
chr7 (1-54)||(4861875-4861928)
chr7 (1-54)||(16273962-16274015)
chr7 (1-54)||(41338245-41338298)
chr7 (1-54)||(47505642-47505695)
chr7 (1-54)||(48684541-48684594)
chr7 (4-54)||(9659065-9659115)
chr7 (1-54)||(21737408-21737462)
chr7 (1-51)||(41287606-41287656)
chr7 (1-54)||(4657066-4657119)
chr7 (1-54)||(38179713-38179766)
chr7 (1-54)||(48605740-48605793)
chr7 (4-54)||(48950288-48950338)
chr7 (1-54)||(17286378-17286431)
chr7 (1-54)||(23592591-23592644)
chr7 (1-54)||(41856324-41856377)
chr7 (1-45)||(4859625-4859669)
chr7 (1-45)||(28588237-28588281)
chr7 (1-52)||(723538-723589)
chr7 (1-54)||(20122289-20122342)
chr7 (1-45)||(16277647-16277691)
chr7 (1-45)||(21815263-21815307)
chr7 (1-45)||(33246723-33246767)
chr7 (1-45)||(40015758-40015802)
chr7 (1-45)||(44459377-44459421)
chr7 (19-54)||(33244668-33244703)
chr7 (1-42)||(19233757-19233798)
chr7 (7-52)||(44520190-44520235)
chr7 (1-55)||(47909407-47909463)
chr7 (1-45)||(8391492-8391536)
chr7 (1-45)||(9663673-9663717)
chr7 (1-45)||(17968382-17968426)
chr7 (1-41)||(18995055-18995095)
chr7 (1-45)||(20119926-20119970)
chr7 (1-45)||(23594608-23594652)
chr7 (1-45)||(30760136-30760180)
chr7 (1-45)||(41289643-41289687)
chr7 (1-45)||(44882623-44882667)
chr7 (1-45)||(46555565-46555609)
chr7 (1-41)||(46934281-46934321)
[»] chr4 (46 HSPs)
chr4 (1-54)||(8941196-8941249)
chr4 (1-54)||(47805648-47805701)
chr4 (1-54)||(41039626-41039679)
chr4 (1-54)||(46719657-46719710)
chr4 (1-54)||(49875687-49875740)
chr4 (1-52)||(52449305-52449356)
chr4 (1-54)||(9366937-9366990)
chr4 (1-54)||(16666628-16666681)
chr4 (1-54)||(20352080-20352133)
chr4 (1-54)||(34074930-34074983)
chr4 (1-54)||(55449492-55449545)
chr4 (1-57)||(31289510-31289566)
chr4 (1-52)||(23417252-23417303)
chr4 (1-52)||(54921345-54921396)
chr4 (4-54)||(13530089-13530139)
chr4 (1-54)||(3033910-3033963)
chr4 (1-54)||(20785183-20785236)
chr4 (1-54)||(27956579-27956632)
chr4 (1-54)||(30823749-30823802)
chr4 (1-54)||(35046184-35046237)
chr4 (1-54)||(43304814-43304867)
chr4 (1-54)||(4654919-4654972)
chr4 (1-54)||(23931642-23931695)
chr4 (1-54)||(42180184-42180237)
chr4 (1-54)||(17363003-17363056)
chr4 (1-54)||(28172200-28172253)
chr4 (1-45)||(4652840-4652884)
chr4 (1-41)||(13861905-13861945)
chr4 (1-45)||(20354208-20354252)
chr4 (1-45)||(30827643-30827687)
chr4 (1-45)||(31292734-31292778)
chr4 (1-45)||(35044937-35044981)
chr4 (1-45)||(49873601-49873645)
chr4 (7-54)||(50494809-50494857)
chr4 (7-54)||(17518915-17518962)
chr4 (4-45)||(3035911-3035952)
chr4 (1-45)||(8939282-8939326)
chr4 (1-45)||(13534697-13534741)
chr4 (1-45)||(16664535-16664579)
chr4 (1-45)||(17361015-17361059)
chr4 (1-45)||(19869760-19869804)
chr4 (1-45)||(20787174-20787218)
chr4 (1-45)||(23419439-23419483)
chr4 (1-45)||(34072906-34072950)
chr4 (1-45)||(41041575-41041619)
chr4 (1-45)||(49970356-49970400)
[»] chr6 (19 HSPs)
chr6 (1-57)||(17557626-17557682)
chr6 (1-54)||(953706-953759)
chr6 (1-54)||(4587915-4587968)
chr6 (1-54)||(14105901-14105954)
chr6 (1-54)||(16922211-16922264)
chr6 (1-54)||(5686390-5686443)
chr6 (1-54)||(23582176-23582229)
chr6 (1-54)||(27784388-27784441)
chr6 (4-52)||(28580924-28580972)
chr6 (1-45)||(24084539-24084583)
chr6 (4-45)||(955759-955800)
chr6 (1-45)||(11837761-11837805)
chr6 (1-45)||(15287509-15287553)
chr6 (1-45)||(17550991-17551035)
chr6 (1-45)||(23580132-23580176)
chr6 (1-45)||(24083044-24083088)
chr6 (1-45)||(14103838-14103882)
chr6 (1-45)||(27782313-27782357)
chr6 (1-45)||(28578471-28578515)
[»] chr1 (29 HSPs)
chr1 (1-52)||(21097345-21097396)
chr1 (1-54)||(30837813-30837866)
chr1 (1-54)||(33706520-33706573)
chr1 (1-52)||(7557476-7557527)
chr1 (1-54)||(7154812-7154865)
chr1 (4-54)||(25657745-25657795)
chr1 (1-54)||(14535405-14535458)
chr1 (1-54)||(35956267-35956320)
chr1 (1-45)||(30303062-30303106)
chr1 (1-45)||(51086627-51086671)
chr1 (1-45)||(52407352-52407396)
chr1 (1-54)||(12769586-12769640)
chr1 (1-54)||(33004516-33004570)
chr1 (1-54)||(36732436-36732490)
chr1 (1-45)||(5328826-5328870)
chr1 (1-45)||(10772595-10772639)
chr1 (1-45)||(21096694-21096738)
chr1 (1-45)||(30301050-30301094)
chr1 (1-45)||(33704457-33704501)
chr1 (1-45)||(44512503-44512547)
chr1 (1-45)||(48127630-48127674)
chr1 (1-45)||(52404524-52404568)
chr1 (1-36)||(31032044-31032079)
chr1 (19-54)||(44510492-44510527)
chr1 (1-45)||(29522029-29522073)
chr1 (1-45)||(29647593-29647637)
chr1 (1-45)||(30838822-30838866)
chr1 (1-45)||(35954278-35954322)
chr1 (1-45)||(46118160-46118204)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-54)||(56454-56507)
[»] chr8 (48 HSPs)
chr8 (1-54)||(278694-278747)
chr8 (1-54)||(637105-637158)
chr8 (1-54)||(822908-822961)
chr8 (1-54)||(2081420-2081473)
chr8 (1-54)||(3703222-3703275)
chr8 (1-54)||(4621536-4621589)
chr8 (1-54)||(16097575-16097628)
chr8 (1-54)||(17946637-17946690)
chr8 (1-54)||(26965418-26965471)
chr8 (1-54)||(41182454-41182507)
chr8 (1-57)||(18957364-18957420)
chr8 (1-54)||(6096794-6096847)
chr8 (1-50)||(15881285-15881334)
chr8 (1-54)||(30476026-30476079)
chr8 (1-54)||(36193378-36193431)
chr8 (1-54)||(39859910-39859963)
chr8 (1-54)||(41181684-41181737)
chr8 (1-46)||(44258026-44258071)
chr8 (1-54)||(45407296-45407349)
chr8 (1-54)||(23345225-23345278)
chr8 (1-54)||(30554756-30554809)
chr8 (1-54)||(38059297-38059350)
chr8 (1-50)||(38576639-38576688)
chr8 (1-54)||(40302467-40302520)
chr8 (1-54)||(41546812-41546864)
chr8 (1-54)||(42647267-42647320)
chr8 (1-45)||(276631-276675)
chr8 (1-45)||(639174-639218)
chr8 (1-45)||(824980-825024)
chr8 (3-54)||(18087552-18087604)
chr8 (4-54)||(3851988-3852038)
chr8 (1-47)||(44256007-44256053)
chr8 (1-54)||(13139373-13139426)
chr8 (1-45)||(4622865-4622909)
chr8 (1-45)||(25583727-25583771)
chr8 (1-45)||(27911935-27911979)
chr8 (1-45)||(27958354-27958398)
chr8 (1-45)||(38060887-38060931)
chr8 (1-45)||(40618467-40618511)
chr8 (1-54)||(30112142-30112196)
chr8 (4-45)||(3846555-3846596)
chr8 (1-45)||(6093235-6093279)
chr8 (1-45)||(16095820-16095864)
chr8 (1-45)||(17853397-17853441)
chr8 (1-45)||(17948619-17948663)
chr8 (1-45)||(18955147-18955191)
chr8 (1-41)||(41544889-41544929)
chr8 (1-45)||(43695291-43695335)
[»] chr5 (37 HSPs)
chr5 (1-54)||(37938546-37938599)
chr5 (1-54)||(39590679-39590732)
chr5 (1-53)||(15527384-15527436)
chr5 (1-52)||(30128679-30128730)
chr5 (1-54)||(822872-822925)
chr5 (1-54)||(7179712-7179765)
chr5 (1-54)||(27018176-27018229)
chr5 (1-54)||(9593797-9593850)
chr5 (4-57)||(20544246-20544299)
chr5 (1-54)||(31547518-31547571)
chr5 (1-54)||(34402119-34402172)
chr5 (1-54)||(37272680-37272733)
chr5 (1-54)||(42609958-42610011)
chr5 (4-52)||(19666592-19666640)
chr5 (8-54)||(19505011-19505057)
chr5 (1-54)||(744126-744179)
chr5 (1-54)||(9985412-9985465)
chr5 (1-45)||(11078410-11078454)
chr5 (1-45)||(745711-745755)
chr5 (1-45)||(9591659-9591703)
chr5 (1-45)||(9987429-9987473)
chr5 (1-45)||(19664811-19664855)
chr5 (1-45)||(31552268-31552312)
chr5 (1-45)||(37940099-37940143)
chr5 (1-45)||(42612366-42612410)
chr5 (1-43)||(11986567-11986609)
chr5 (1-43)||(12499267-12499309)
chr5 (4-45)||(824947-824988)
chr5 (1-45)||(11984526-11984568)
chr5 (1-45)||(3036384-3036428)
chr5 (1-45)||(11076843-11076887)
chr5 (1-45)||(13305576-13305620)
chr5 (1-45)||(20546301-20546345)
chr5 (1-41)||(27550651-27550691)
chr5 (1-45)||(34663551-34663595)
chr5 (1-45)||(37270292-37270336)
chr5 (1-45)||(39588307-39588351)
[»] chr2 (29 HSPs)
chr2 (1-54)||(1053187-1053240)
chr2 (1-54)||(15154476-15154529)
chr2 (1-54)||(25225353-25225406)
chr2 (1-54)||(38280313-38280366)
chr2 (1-54)||(15400887-15400940)
chr2 (1-54)||(25761204-25761257)
chr2 (1-54)||(39965232-39965285)
chr2 (1-54)||(75626-75679)
chr2 (1-54)||(2290437-2290491)
chr2 (4-54)||(28390009-28390059)
chr2 (1-43)||(42078909-42078951)
chr2 (1-45)||(6647254-6647298)
chr2 (1-43)||(3849845-3849887)
chr2 (1-43)||(7575602-7575644)
chr2 (1-54)||(4736763-4736816)
chr2 (1-54)||(27549730-27549783)
chr2 (1-45)||(3753056-3753100)
chr2 (19-54)||(3904980-3905015)
chr2 (1-45)||(42080862-42080908)
chr2 (13-54)||(39773322-39773364)
chr2 (4-45)||(6644593-6644634)
chr2 (1-50)||(39067094-39067143)
chr2 (1-45)||(1054824-1054868)
chr2 (1-45)||(3907020-3907064)
chr2 (1-41)||(14006169-14006209)
chr2 (1-45)||(15152424-15152468)
chr2 (1-45)||(15398861-15398904)
chr2 (1-45)||(36600743-36600787)
chr2 (1-45)||(38282378-38282422)
[»] scaffold0208 (2 HSPs)
scaffold0208 (1-54)||(3913-3966)
scaffold0208 (1-45)||(5856-5900)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-54)||(30650-30703)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-45)||(6127-6171)


Alignment Details
Target: scaffold0779 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 163 - 107
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  163 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagttaa 107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13243580 - 13243524
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13243580 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagttaa 13243524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23022032 - 23021979
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23022032 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 23021979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29894764 - 29894711
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29894764 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 29894711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50546525 - 50546578
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  50546525 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 50546578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3890824 - 3890875
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3890824 atcaaccaatcaaaatgtaatatatattgacaacattaaatgtcataaatga 3890875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 31311722 - 31311772
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31311722 aaccaatcaaaatgtaatatatattgacaacattaaatgtcataaatgagt 31311772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2219983 - 2219930
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  2219983 atcaaccaatcaaaatgtaatatacattggtaacattaaatgtcataaatgagt 2219930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8849806 - 8849859
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  8849806 atcaaccaatcaaaatgtaatatagattggcaacattaaatgccataaatgagt 8849859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11123652 - 11123599
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  11123652 atcaaccaatcaaaatgtaatctagattggcaacattaaatgtcataaatgagt 11123599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18412124 - 18412071
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  18412124 atcaaccaatcaaaatataatatacattggcaacattaaatgtcataaatgagt 18412071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27330167 - 27330220
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  27330167 atcaaccaatcaaaatgtaatatacattggcaacattaaatgccataaatgagt 27330220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40908496 - 40908443
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  40908496 atcaaccaatcaaaatgtaatatacattggcaacattaaatatcataaatgagt 40908443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41695968 - 41696021
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  41695968 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 41696021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47911005 - 47911058
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  47911005 atcaaccaatcaaaatgtaatatacattggcagcattaaatgtcataaatgagt 47911058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 52745708 - 52745761
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  52745708 atcaatcaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 52745761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4233207 - 4233154
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  4233207 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtcataaatgagt 4233154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18763921 - 18763868
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  18763921 atcaaccaatcaagatgtaatatacattgacaacattaaatgtcataaatgagt 18763868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22606852 - 22606799
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  22606852 atcaaccaatcaaaatataatatacattgacaacattaaatgtcataaatgagt 22606799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30361695 - 30361748
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  30361695 atcaaccaattaaaatgtaatatatattgacaactttaaatgtcataaatgagt 30361748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37178295 - 37178344
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaat 50  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  37178295 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaat 37178344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37218221 - 37218270
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaat 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  37218221 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcagaaat 37218270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38698816 - 38698763
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  38698816 atcaaccaatcaaaatgtaatatacattgacaacattaaatatcataaatgagt 38698763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41103731 - 41103678
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  41103731 atcaacaaattaaaatgtaatatacattggcaacattaaatgtcataaatgagt 41103678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44841278 - 44841331
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  44841278 atcaaccaatcaaaatgtaatatacattgacaatattaaatgtcataaatgagt 44841331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50536008 - 50536061
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  50536008 atcaaccaatcaaaatgtaatataccttgacaacattaaatgtcataaatgagt 50536061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50610604 - 50610551
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  50610604 atcaaccaatcaaaatgtaatatacattgacaatattaaatgtcataaatgagt 50610551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53583711 - 53583658
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  53583711 atcaaccaatcaaaatgtaatatacattagcaacattaaatgtcatatatgagt 53583658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 37787267 - 37787217
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  37787267 aaccaatcaaaatgtaatatacattgacaacattaaatatcataaatgagt 37787217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51720913 - 51720967
Alignment:
Q  1 atcaaccaatcaaaatgtaa-tatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  51720913 atcaaccaatcaaaatgtaaatatacattgacaacattaaatgtcataaatgagt 51720967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45051791 - 45051843
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  45051791 atcaaccaatcaaaatgtaatatagattggcaa-tttaaatgtcataaatgagt 45051843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22429036 - 22428992
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  22429036 atcaaccaatcaaaatgtaatatacataggcaacattaaatgtca 22428992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45172721 - 45172670
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    |||||||||||||||||||||||| |||| |||||||||||||  |||||||    
T  45172721 atcaaccaatcaaaatgtaatatacattgacaacattaaatgttttaaatga 45172670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4230900 - 4230953
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| |||||| |||||||||| |||| ||||||||||||| ||||||||||    
T  4230900 atcaactaatcaacatgtaatatacattgacaacattaaatgttataaatgagt 4230953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30438319 - 30438372
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| ||| ||||||||||||| ||||| || ||||||||||||||||||||    
T  30438319 atcaacaaattaaaatgtaatatacattggtaatattaaatgtcataaatgagt 30438372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42827996 - 42827943
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||| | ||||||| |||| ||||||||||||||||||||||||    
T  42827996 atcaatcaatcaaactataatatacattgacaacattaaatgtcataaatgagt 42827943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 55219889 - 55219836
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| |||| |||||||| |||| |||| |||||||||||||||||||    
T  55219889 atcaaccaattaaaaagtaatatacattgacaactttaaatgtcataaatgagt 55219836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8852309 - 8852265
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  8852309 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 8852265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11121126 - 11121170
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  11121126 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 11121170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15084730 - 15084686
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  15084730 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 15084686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 16008675 - 16008726
Alignment:
Q  6 ccaatcaaaatgtaatatatattggcaacattaaatgtc--ataaatgagtt 55  Q
    |||||||||||||||||||||| || |||||||||||||  |||||||||||    
T  16008675 ccaatcaaaatgtaatatatataggtaacattaaatgtcaaataaatgagtt 16008726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16463803 - 16463847
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  16463803 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 16463847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30043650 - 30043606
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  30043650 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 30043606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37220265 - 37220221
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||| || ||||||| ||||||    
T  37220265 atcaaccaatcaaaatgtaatatatataggtaacattagatgtca 37220221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37785333 - 37785377
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  37785333 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 37785377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41698250 - 41698210
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaat 41  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  41698250 atcaaccaatcaaaatgtaatatatataggtaacattaaat 41698210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44843357 - 44843313
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  44843357 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 44843313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50548653 - 50548609
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  50548653 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 50548609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 53845180 - 53845224
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  53845180 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 53845224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27128176 - 27128137
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaa 40  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  27128176 atcaaccaatcaaaatgtaatatacattggcaatattaaa 27128137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 55413181 - 55413127
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtc-ataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||| ||||| || ||||||||||    
T  55413181 atcaaccaatcaaaatgtaatatacattgacaacaataaatttcaataaatgagt 55413127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37523089 - 37523134
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcat 46  Q
    |||||||||| ||||||||||||| || | ||||||||||||||||    
T  37523089 atcaaccaattaaaatgtaatatacatagacaacattaaatgtcat 37523134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45169869 - 45169925
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtc--ataaatgagtt 55  Q
    |||||| ||||||||||||||||| || || |||||||||||||  |||||||||||    
T  45169869 atcaactaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagtt 45169925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2217925 - 2217969
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || |  ||||||||||||||    
T  2217925 atcaaccaatcaaaatgtaatatacatagataacattaaatgtca 2217969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6177370 - 6177326
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||| |||||||||||||||||||| || | ||||||||||||    
T  6177370 atcaactaatcaaaatgtaatatatataggtaccattaaatgtca 6177326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13213340 - 13213384
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || | ||||||||||||    
T  13213340 atcaaccaatcaaaatgtaatatacataggtagcattaaatgtca 13213384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18410106 - 18410150
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || || |||||||||||    
T  18410106 atcaaccaatcaaaatgtaatatacataggtaatattaaatgtca 18410150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22604765 - 22604809
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||| |||||||||||||||||| || || ||||||||||||||    
T  22604765 atcaatcaatcaaaatgtaatatacataggtaacattaaatgtca 22604809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27239221 - 27239177
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  27239221 atcaaccaatcaaaatgtaatatacatatgtaacattaaatgtca 27239177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27320906 - 27320950
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || |  ||||||||||||||    
T  27320906 atcaaccaatcaaaatgtaatatacatagataacattaaatgtca 27320950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38235393 - 38235437
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  38235393 atcaaccaatcaaaatgtaatatacatatgtaacattaaatgtca 38235437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 53776453 - 53776493
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaat 41  Q
    |||||||||| ||||||||||||| |||| |||||||||||    
T  53776453 atcaaccaattaaaatgtaatatacattgacaacattaaat 53776493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 53778467 - 53778423
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || | ||| |||||||||||    
T  53778467 atcaaccaatcaaaatgtaatatacatagacaatattaaatgtca 53778423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 3e-22; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 46553487 - 46553540
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46553487 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 46553540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21817377 - 21817324
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21817377 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 21817324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40013675 - 40013728
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40013675 atcaaccaatcaaaatgtaatatatattgacaacattaaatgtcataaatgagt 40013728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44456949 - 44457002
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44456949 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 44457002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44884779 - 44884726
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44884779 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 44884726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 241573 - 241522
Alignment:
Q  3 caaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  241573 caaccaatcaaaatgtaatatatattgacaacattaaatgtcataaatgagt 241522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3412728 - 3412781
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  3412728 atcaaccaatcaaaatataatatacattggcaacattaaatgtcataaatgagt 3412781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4861928 - 4861875
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  4861928 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 4861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16273962 - 16274015
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  16273962 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 16274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41338298 - 41338245
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  41338298 atcaaccaatcaaaatgtaatatacattagcaacattaaatgtcataaatgagt 41338245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47505695 - 47505642
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  47505695 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 47505642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48684594 - 48684541
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  48684594 atcaaccaatcaaaatgtaatatacattggtaacattaaatgtcataaatgagt 48684541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 9659065 - 9659115
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9659065 aaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 9659115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21737462 - 21737408
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtc-ataaatgagt 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  21737462 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcaataaatgagt 21737408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41287606 - 41287656
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatg 51  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  41287606 atcaactaatcaaaatgtaatatatattgacaacattaaatgtcataaatg 41287656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4657066 - 4657119
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  4657066 atcaaccaatcaaaatgtaatatacattgataacattaaatgtcataaatgagt 4657119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38179713 - 38179766
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  38179713 atcaaccaatcaaaacgtaatatacattgacaacattaaatgtcataaatgagt 38179766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48605740 - 48605793
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  48605740 atcaaccaatcaaaatgtaatatacattgataacattaaatgtcataaatgagt 48605793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 48950288 - 48950338
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  48950288 aaccaatcaaaatgtaatatacattgacaacattaaatatcataaatgagt 48950338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17286378 - 17286431
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  17286378 atcaatcaatcaaaatgtaatatacattggcaacattaaatatcacaaatgagt 17286431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23592591 - 23592644
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  23592591 atcaatcaatcaaaatgtaatatacattgacaacattaaatgtcataaacgagt 23592644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41856324 - 41856377
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||  |||||||||| ||||||||||||    
T  41856324 atcaaccaatcaaaatgtaatatacattgataacattaaatatcataaatgagt 41856377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4859625 - 4859669
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||| || ||||||||||||||    
T  4859625 atcaaccaatcaaaatgtaatatatataggtaacattaaatgtca 4859669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28588237 - 28588281
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  28588237 atcaactaatcaaaatgtaatatacattggcaacattaaatgtca 28588281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 723538 - 723589
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    |||||||||| |||| |||||||| |||| ||||||||||||||||||||||    
T  723538 atcaaccaataaaaacgtaatatacattgacaacattaaatgtcataaatga 723589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20122342 - 20122289
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||| |||||||||||||||  |||| ||| ||||||||||||||||||||    
T  20122342 atcaacctatcaaaatgtaatatgcattgacaatattaaatgtcataaatgagt 20122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16277691 - 16277647
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  16277691 atcaaccaatcaaaatgtaatatacatagggaacattaaatgtca 16277647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21815263 - 21815307
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  21815263 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 21815307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33246767 - 33246723
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  33246767 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 33246723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40015802 - 40015758
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||    
T  40015802 atcaatcaatcaaaatgtaatatatataggtaacattaaatgtca 40015758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44459421 - 44459377
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  44459421 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 44459377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 33244668 - 33244703
Alignment:
Q  19 aatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| |||||||||||||||||||||||||||||    
T  33244668 aatatacattggcaacattaaatgtcataaatgagt 33244703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19233798 - 19233757
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatg 42  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  19233798 atcaatcaatcaaaatataatatacattggcaacattaaatg 19233757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 44520190 - 44520235
Alignment:
Q  7 caatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    |||| ||||||||||||| |||| ||| ||||||||||||||||||    
T  44520190 caattaaaatgtaatatacattgacaatattaaatgtcataaatga 44520235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 47909463 - 47909407
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtc--ataaatgagtt 55  Q
    |||||||||||||||||||||||| || || ||||| |||||||  |||||||||||    
T  47909463 atcaaccaatcaaaatgtaatatacataggtaacataaaatgtcaaataaatgagtt 47909407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8391492 - 8391536
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||| |||||||||||||| ||| |||| |||||||||||||||    
T  8391492 atcaaacaatcaaaatgtaacatacattgacaacattaaatgtca 8391536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9663717 - 9663673
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  9663717 atcaaccaatcaaaatgtaatatacataagtaacattaaatgtca 9663673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17968426 - 17968382
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| |  || ||||||||||||||    
T  17968426 atcaaccaatcaaaatgtaatatacacaggtaacattaaatgtca 17968382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18995095 - 18995055
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaat 41  Q
    |||||||||||||||||||||||| || || ||||||||||    
T  18995095 atcaaccaatcaaaatgtaatatacataggtaacattaaat 18995055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20119926 - 20119970
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||| ||||||||||    
T  20119926 atcaaccaatcaaaatgtaatatacataggtaactttaaatgtca 20119970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23594652 - 23594608
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || || |||||||||||    
T  23594652 atcaaccaatcaaaatgtaatatacataggtaatattaaatgtca 23594608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30760180 - 30760136
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||| ||||||||||||||||| || || ||||||||||||||    
T  30760180 atcaactaatcaaaatgtaatatacataggtaacattaaatgtca 30760136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41289687 - 41289643
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||| |||| ||||||||||||| || |||||||||||||||||    
T  41289687 atcaatcaataaaaatgtaatatacataggcaacattaaatgtca 41289643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44882623 - 44882667
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || || |||||||||||    
T  44882623 atcaaccaatcaaaatgtaatatacataggtaatattaaatgtca 44882667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46555609 - 46555565
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||| ||||||| || || ||||||||||||||    
T  46555609 atcaaccaatcaaaatataatatacataggtaacattaaatgtca 46555565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46934281 - 46934321
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaat 41  Q
    ||||||||||||||||||| |||| |||| |||||||||||    
T  46934281 atcaaccaatcaaaatgtagtatacattgccaacattaaat 46934321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 3e-22; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8941249 - 8941196
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8941249 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 8941196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47805648 - 47805701
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47805648 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 47805701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41039626 - 41039679
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41039626 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 41039679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 46719710 - 46719657
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46719710 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 46719657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49875740 - 49875687
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49875740 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcacaaatgagt 49875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 52449356 - 52449305
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  52449356 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatga 52449305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9366937 - 9366990
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9366937 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 9366990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16666681 - 16666628
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  16666681 atcaaccaatcaaaatgtaatatatattagcaacattaaatatcataaatgagt 16666628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20352080 - 20352133
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  20352080 atcaaccaatcaaaatgtaatatacattggcaacattaaaggtcataaatgagt 20352133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34074983 - 34074930
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  34074983 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 34074930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 55449492 - 55449545
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  55449492 atcaaccaatcaaaatgtaatatacattggcaacattaaatgttataaatgagt 55449545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31289510 - 31289566
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagttaa 57  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  31289510 atcaaccaattaaaatgtaatatacattggctacattaaatgtcataaatgagttaa 31289566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23417252 - 23417303
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  23417252 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatga 23417303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 54921396 - 54921345
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  54921396 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatga 54921345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 13530089 - 13530139
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13530089 aaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 13530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3033910 - 3033963
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  3033910 atcaaccaatcaaaatataatatacattgccaacattaaatgtcataaatgagt 3033963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20785183 - 20785236
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  20785183 atcaaccaatcaaaatataatataaattgacaacattaaatgtcataaatgagt 20785236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27956579 - 27956632
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  27956579 atcaatcaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 27956632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30823749 - 30823802
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  30823749 atcaaccaatcaaaatgttatatacattgacaacattaaatgtcataaatgagt 30823802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35046237 - 35046184
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  35046237 atcaaccaatcaaaatgtaatatacattgacaatattaaatgtcataaatgagt 35046184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43304867 - 43304814
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||||||    
T  43304867 atcaaccaatcaaaatgtaatatacatcgacaacattaaatgtcataaatgagt 43304814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4654972 - 4654919
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||| ||||||    
T  4654972 atcaaccaatcaaaatataatatacattgacaacattaaatgtcatatatgagt 4654919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23931642 - 23931695
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  23931642 atcaacaaatcaaaatgtaatatacattgacaacattaaatatcataaatgagt 23931695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42180237 - 42180184
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||    
T  42180237 atcaaccaatcaaaatgtaatatatgttgacaacattaaattttataaatgagt 42180184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17363056 - 17363003
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||| ||||||||||  ||||||||||||    
T  17363056 atcaatcaatcaaaatgtaatatacattgtcaacattaaaaatcataaatgagt 17363003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28172200 - 28172253
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||| |||||| |||| ||| |||||| |||||||||||||    
T  28172200 atcaaccaatcaaaatgcaatatacattgacaatattaaacgtcataaatgagt 28172253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4652840 - 4652884
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  4652840 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 4652884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13861945 - 13861905
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaat 41  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  13861945 atcaaccaatcaaaatgtaatatacattgacaacattaaat 13861905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20354252 - 20354208
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  20354252 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 20354208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30827687 - 30827643
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  30827687 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 30827643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31292778 - 31292734
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  31292778 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 31292734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35044937 - 35044981
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  35044937 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 35044981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49873601 - 49873645
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  49873601 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 49873645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 50494809 - 50494857
Alignment:
Q  7 caatcaaaatgtaatatatattggcaacattaaatgtc-ataaatgagt 54  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  50494809 caatcaaaatgtaatatacattggtaacattaaatgtcaataaatgagt 50494857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 17518915 - 17518962
Alignment:
Q  7 caatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||| || | ||||||||||||||| ||||||||    
T  17518915 caatcaaaatgtaatatacatcgacaacattaaatgtcacaaatgagt 17518962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 3035952 - 3035911
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||| || || ||||||||||||||    
T  3035952 aaccaatcaaaatgtaatatacataggtaacattaaatgtca 3035911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8939282 - 8939326
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||| ||||||||||||||||| || || ||||||||||||||    
T  8939282 atcaactaatcaaaatgtaatatacataggtaacattaaatgtca 8939326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13534741 - 13534697
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  13534741 atcaaccaatcaaaatgtaatatacataagtaacattaaatgtca 13534697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16664535 - 16664579
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||| |||||| || || ||||||||||||||    
T  16664535 atcaaccaatcaaaatgaaatatacataggtaacattaaatgtca 16664579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17361015 - 17361059
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||| |||||||||||||||| || || |||||||||||    
T  17361015 atcaaccaattaaaatgtaatatatataggtaatattaaatgtca 17361059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19869760 - 19869804
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||   | ||||||||||||||    
T  19869760 atcaaccaatcaaaatgtaatatataaatgtaacattaaatgtca 19869804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20787218 - 20787174
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  20787218 atcaaccaatcaaaatgtaatatacataagtaacattaaatgtca 20787174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23419483 - 23419439
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  23419483 atcaaccaatcaaaatgtaatatacatatgtaacattaaatgtca 23419439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34072906 - 34072950
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || || |||||||||||    
T  34072906 atcaaccaatcaaaatgtaatatacataggtaatattaaatgtca 34072950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41041619 - 41041575
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  41041619 atcaaccaatcaaaatgtaatatacatatgtaacattaaatgtca 41041575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49970400 - 49970356
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||| |||||||||||||||||| || || ||||||||||||||    
T  49970400 atcaatcaatcaaaatgtaatatacataggtaacattaaatgtca 49970356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17557626 - 17557682
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagttaa 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17557626 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagttaa 17557682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 953706 - 953759
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  953706 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 953759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4587915 - 4587968
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4587915 atcaaccaattaaaatgtaatatatattggcaacattaaatgtcataaatgagt 4587968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14105954 - 14105901
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14105954 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 14105901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16922264 - 16922211
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16922264 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 16922211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5686390 - 5686443
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  5686390 atcaaccaatcaaaatgtaatatatattgttaatattaaatgtcataaatgagt 5686443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23582229 - 23582176
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  23582229 atcaaccaattaaaatgtaatatacattgacaacattaaatgtcataaatgagt 23582176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27784441 - 27784388
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  27784441 atcaaccaataaaaatgtaatatacattgacaacattaaatgtcataaatgagt 27784388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 28580972 - 28580924
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  28580972 aaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatga 28580924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24084583 - 24084539
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  24084583 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtca 24084539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 955800 - 955759
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  955800 aaccaatcaaaatgtaatatatataggtaacattaaatgtca 955759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11837805 - 11837761
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  11837805 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 11837761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15287509 - 15287553
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||    
T  15287509 atcaaccaatcaaaatgtaatatacattgataacattaaatgtca 15287553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17551035 - 17550991
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  17551035 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 17550991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23580132 - 23580176
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  23580132 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 23580176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24083044 - 24083088
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||| ||||||||||| || |||||||||||||||||    
T  24083044 atcaaccaatcataatgtaatatacataggcaacattaaatgtca 24083088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14103838 - 14103882
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || |  ||||||||||||||    
T  14103838 atcaaccaatcaaaatgtaatatacatagataacattaaatgtca 14103882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27782313 - 27782357
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || || |||||||||||    
T  27782313 atcaaccaatcaaaatgtaatatacataggtaatattaaatgtca 27782357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28578471 - 28578515
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  28578471 atcaaccaatcaaaatgtaatatacatatgtaacattaaatgtca 28578515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 5e-21; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21097396 - 21097345
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21097396 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 21097345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30837813 - 30837866
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  30837813 atcaatcaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 30837866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33706573 - 33706520
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  33706573 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 33706520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7557527 - 7557476
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  7557527 atcaaccaatcaaaatttaatatatattgacaacattaaatgtcataaatga 7557476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7154865 - 7154812
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  7154865 atcaaccaatcaaaatgtaatatacattgtcaatattaaatgtcataaatgagt 7154812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 25657795 - 25657745
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  25657795 aaccaatcaaaatgtaatatacattgacaacattaaatgacataaatgagt 25657745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14535405 - 14535458
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||    
T  14535405 atcaaccaattaaaatgtaatatacattgacaacattaaatgtcataaacgagt 14535458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35956320 - 35956267
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||| |||||||||||| |||||||||||    
T  35956320 atcaaccaatcaaaatataatatacattgacaacattaaatgccataaatgagt 35956267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30303106 - 30303062
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  30303106 atcaaccaatcaaaatgtaatatacataggcaacattaaatgtca 30303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51086627 - 51086671
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||| || ||||||||||||||    
T  51086627 atcaaccaatcaaaatgtaatatatataggtaacattaaatgtca 51086671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52407396 - 52407352
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  52407396 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtca 52407352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12769640 - 12769586
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtc-ataaatgagt 54  Q
    |||| ||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  12769640 atcacccaatcaaaatgtaatatacattgacaacattaaatgtcaataaatgagt 12769586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33004516 - 33004570
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtc-ataaatgagt 54  Q
    |||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  33004516 atcaactaatcaaaatgtaatatacattgacaacattaaatgtcaataaatgagt 33004570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36732490 - 36732436
Alignment:
Q  1 atcaaccaatcaaaatgtaa-tatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||    
T  36732490 atcaaccaattaaaatgtaaatatacattgacaacattaaatgtcataaatgagt 36732436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5328870 - 5328826
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||    
T  5328870 atcaatcaatcaaaatgtaatatacattgacaacattaaatgtca 5328826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10772595 - 10772639
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  10772595 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 10772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21096694 - 21096738
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  21096694 atcaaccaatcaaaatgtaatatacataggaaacattaaatgtca 21096738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30301050 - 30301094
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||    
T  30301050 atcaaccaatcaaaatgtaatatacattggcaattttaaatgtca 30301094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33704457 - 33704501
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  33704457 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 33704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44512547 - 44512503
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  44512547 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 44512503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48127630 - 48127674
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  48127630 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 48127674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 52404524 - 52404568
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||| |||||||||| | |||||||||||||||    
T  52404524 atcaaccaatcaaaatataatatatatagacaacattaaatgtca 52404568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 31032079 - 31032044
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacat 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  31032079 atcaaccaatcaaaatgtaatatacattggcaacat 31032044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 44510492 - 44510527
Alignment:
Q  19 aatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| |||||||||||||||||||||||||||||    
T  44510492 aatatacattggcaacattaaatgtcataaatgagt 44510527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29522073 - 29522029
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  29522073 atcaaccaatcaaaatgtaatatacataagtaacattaaatgtca 29522029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29647593 - 29647637
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||| ||||||| |||| |||| ||||||||||    
T  29647593 atcaaccaatcaaaatataatatacattgacaacgttaaatgtca 29647637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30838866 - 30838822
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||| |||| || || ||||||||||||||    
T  30838866 atcaaccaatcaaaatgtactatacataggtaacattaaatgtca 30838822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35954278 - 35954322
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||| |||||||||||| || || ||||||||||||||    
T  35954278 atcaaccaatcgaaatgtaatatagataggtaacattaaatgtca 35954322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 46118160 - 46118204
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||| ||||||    
T  46118160 atcaaccaatcaaaatgtaatatacataggtaacattatatgtca 46118204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 56507 - 56454
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  56507 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 56454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 8e-20; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 278747 - 278694
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  278747 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 278694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 637105 - 637158
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  637105 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 637158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 822908 - 822961
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  822908 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 822961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2081420 - 2081473
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2081420 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 2081473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3703222 - 3703275
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  3703222 atcaatcaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 3703275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4621536 - 4621589
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  4621536 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 4621589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16097628 - 16097575
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  16097628 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcgtaaatgagt 16097575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17946637 - 17946690
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  17946637 atcaaccaattaaaatgtaatatatattgtcaacattaaatgtcataaatgagt 17946690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26965418 - 26965471
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  26965418 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 26965471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41182454 - 41182507
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  41182454 atcaacaaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 41182507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18957420 - 18957364
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagttaa 57  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  18957420 atcaatcaatcaaaatgtaatatacattggcaacattaaatatcataaatgagttaa 18957364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6096847 - 6096794
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  6096847 atcaaccaatcaaaatgtaatatacattaacaacattaaatgtcataaatgagt 6096794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15881285 - 15881334
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaat 50  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  15881285 atcaaccaatcaaaatgtaatatacattggtaacattaaatgtcataaat 15881334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30476026 - 30476079
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  30476026 atcaaccaatcaagatgtaatatacattggcaacattaaatatcataaatgagt 30476079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36193431 - 36193378
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36193431 atcaaccaatcaaaatgtaatatacattgccaaaattaaatgtcataaatgagt 36193378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39859963 - 39859910
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  39859963 atcaaccaatcaaaatgtaatatacattgataacattaaatgtcataaatgagt 39859910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41181684 - 41181737
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  41181684 atcaaccaatcagaatgtaatatacattgacaacattaaatgtcataaatgagt 41181737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44258071 - 44258026
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcat 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  44258071 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 44258026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45407296 - 45407349
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  45407296 atcaaccaatcaaaatgtaatatacattgacgacattaaatgtcataaatgagt 45407349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23345225 - 23345278
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||  |||||||||||| |||||||||||    
T  23345225 atcaaccaatcaaaatgtaatatacatttacaacattaaatggcataaatgagt 23345278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30554756 - 30554809
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  30554756 atcaatcaatcaaaatgtaatatacattgacaatattaaatgtcataaatgagt 30554809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38059297 - 38059350
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||| |||||||    
T  38059297 atcaaccaatcaaaatataatatacattgacaacattaaatgtcatcaatgagt 38059350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38576639 - 38576688
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaat 50  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||    
T  38576639 atcaaccaatcaaaatgtaatatacatcgacaacattaaatgtcataaat 38576688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40302467 - 40302520
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| |||| ||||||||| |||||||||    
T  40302467 atcaaccaatcaaaatgtaatatacattgacaacgttaaatgtcttaaatgagt 40302520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41546864 - 41546812
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  41546864 atcaaccaatcaaaatgtaa-atacattggcagcattaaatgtcataaatgagt 41546812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42647320 - 42647267
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||| || |||||||||||||||||||||    
T  42647320 atcaaccaatcaaaatataatatacattgtcagcattaaatgtcataaatgagt 42647267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 276631 - 276675
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||| || ||||||||||||||    
T  276631 atcaaccaatcaaaatgtaatatatataggtaacattaaatgtca 276675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 639218 - 639174
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||| || ||||||||||||||    
T  639218 atcaaccaatcaaaatgtaatatatataggtaacattaaatgtca 639174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 825024 - 824980
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||| || ||||||||||||||    
T  825024 atcaaccaatcaaaatgtaatatatataggtaacattaaatgtca 824980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 18087552 - 18087604
Alignment:
Q  3 caaccaatcaaaatgtaatatatattggcaacattaaatgtc-ataaatgagt 54  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  18087552 caaccaatcaaagtgtaatatacattggcaacattaaatgtcaataaatgagt 18087604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 3852038 - 3851988
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||||||||||    
T  3852038 aaccaatcaatatgtaatatacgttgacaacattaaatgtcataaatgagt 3851988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44256007 - 44256053
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcata 47  Q
    |||||||||| |||||||||||||||| || ||||||||||||||||    
T  44256007 atcaaccaattaaaatgtaatatatataggtaacattaaatgtcata 44256053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13139373 - 13139426
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||| |||||||| ||||  || ||||||||||||||||||||    
T  13139373 atcaaccaatcaaaaggtaatatacattgataaaattaaatgtcataaatgagt 13139426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4622909 - 4622865
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  4622909 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 4622865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25583771 - 25583727
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  25583771 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 25583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27911935 - 27911979
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  27911935 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 27911979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27958354 - 27958398
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  27958354 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 27958398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38060931 - 38060887
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  38060931 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 38060887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40618511 - 40618467
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||    
T  40618511 atcaaccaatcaacatgtaatatacattgacaacattaaatgtca 40618467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30112196 - 30112142
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtc-ataaatgagt 54  Q
    ||||| |||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  30112196 atcaatcaatcaaaatgtaatatccattgacaacattaaatgtcaataaatgagt 30112142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 3846555 - 3846596
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||| || || ||||||||||||||    
T  3846555 aaccaatcaaaatgtaatatagataggtaacattaaatgtca 3846596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6093235 - 6093279
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||| |||||||||||||||||| || || ||||||||||||||    
T  6093235 atcaatcaatcaaaatgtaatatacataggtaacattaaatgtca 6093279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16095820 - 16095864
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||| ||||||| || || ||||||||||||||    
T  16095820 atcaaccaatcaaaatataatatacataggtaacattaaatgtca 16095864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17853441 - 17853397
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || |  ||||||||||||||    
T  17853441 atcaaccaatcaaaatgtaatatacatagataacattaaatgtca 17853397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17948663 - 17948619
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||| ||||||||||||| || || ||||||||||||||    
T  17948663 atcaaccaattaaaatgtaatatacataggtaacattaaatgtca 17948619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18955147 - 18955191
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||| |||| || || ||||||||||||||    
T  18955147 atcaaccaatcaaaatgtactatacataggtaacattaaatgtca 18955191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41544889 - 41544929
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaat 41  Q
    |||||||||||||||||||||||||||  | ||||||||||    
T  41544889 atcaaccaatcaaaatgtaatatatataagtaacattaaat 41544929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43695335 - 43695291
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||| ||||||||||||||||| || || ||||||||||||||    
T  43695335 atcaactaatcaaaatgtaatatacataggtaacattaaatgtca 43695291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37938546 - 37938599
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37938546 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 37938599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39590732 - 39590679
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39590732 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 39590679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15527436 - 15527384
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgag 53  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15527436 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgag 15527384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30128679 - 30128730
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30128679 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatga 30128730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 822872 - 822925
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  822872 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 822925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7179712 - 7179765
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7179712 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 7179765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27018176 - 27018229
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  27018176 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtaataaatgagt 27018229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9593850 - 9593797
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  9593850 atcaaccaatcaaaatataatatacattgacaacattaaatgtcataaatgagt 9593797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 20544246 - 20544299
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagttaa 57  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  20544246 aaccaatcaaaatataatatacattggaaacattaaatgtcataaatgagttaa 20544299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31547518 - 31547571
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  31547518 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcatatatgagt 31547571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34402172 - 34402119
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  34402172 atcaaccaatcaaaatgtaatatacattgacaacattaaatgttataaatgagt 34402119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37272733 - 37272680
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  37272733 atcagccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 37272680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42609958 - 42610011
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  42609958 atcaaccaatcaaaatgtaatatacattgacaatattaaatgtcataaatgagt 42610011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 19666640 - 19666592
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatga 52  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  19666640 aaccaatcaaaatgtaatatacattggcaacattaaatatcataaatga 19666592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 19505057 - 19505011
Alignment:
Q  8 aatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  19505057 aatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 19505011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 744126 - 744179
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| ||||||||||||| |||| |||| |||||||||||||||||||    
T  744126 atcaaccaattaaaatgtaatatacattgacaacgttaaatgtcataaatgagt 744179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9985412 - 9985465
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  9985412 atcaactaatcaaaatgtaatatacattgacaacattaaatatcataaatgagt 9985465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11078454 - 11078410
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  11078454 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtca 11078410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 745755 - 745711
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  745755 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 745711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9591659 - 9591703
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  9591659 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 9591703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9987473 - 9987429
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  9987473 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 9987429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19664811 - 19664855
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  19664811 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 19664855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31552312 - 31552268
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  31552312 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 31552268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37940143 - 37940099
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  37940143 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 37940099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42612410 - 42612366
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  42612410 atcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 42612366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11986609 - 11986567
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgt 43  Q
    |||||||||||||||||||||||| ||| | ||||||||||||    
T  11986609 atcaaccaatcaaaatgtaatatacattagtaacattaaatgt 11986567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12499267 - 12499309
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgt 43  Q
    |||||||||||||||||||||||| || || ||||||||||||    
T  12499267 atcaaccaatcaaaatgtaatatacataggtaacattaaatgt 12499309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 824988 - 824947
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||| || || ||||||||||||||    
T  824988 aaccaatcaaaatgtaatatagataggtaacattaaatgtca 824947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11984526 - 11984568
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||  || ||||||||||||||    
T  11984526 atcaaccaatcaaaatgtaatatata--ggtaacattaaatgtca 11984568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3036428 - 3036384
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| |   ||||||||||||||||    
T  3036428 atcaaccaatcaaaatgtaatataaaaatgcaacattaaatgtca 3036384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11076843 - 11076887
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||| |||| || || |||||||||||||||||    
T  11076843 atcaaccaatcaaaatataatttacataggcaacattaaatgtca 11076887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13305620 - 13305576
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  13305620 atcaaccaatcaaaatgtaatatacataagtaacattaaatgtca 13305576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20546345 - 20546301
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||| ||||| || || ||||||||||||||    
T  20546345 atcaaccaatcaaaatgttatatacataggtaacattaaatgtca 20546301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27550651 - 27550691
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaat 41  Q
    |||||||||||||||||||||||| || || ||||||||||    
T  27550651 atcaaccaatcaaaatgtaatatacataggtaacattaaat 27550691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34663595 - 34663551
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||| |||| || || ||||||||||||||    
T  34663595 atcaaccaatcaaaatgtagtatacataggtaacattaaatgtca 34663551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37270292 - 37270336
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  37270292 atcaaccaatcaaaatgtaatatacataaggaacattaaatgtca 37270336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39588307 - 39588351
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  39588307 atcaaccaatcaaaatgtaatatacataagtaacattaaatgtca 39588351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 8e-20; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1053187 - 1053240
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1053187 atcaacaaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 1053240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15154529 - 15154476
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15154529 atcaaccaatcaaaatgtaatatatattgacaacattaaatgtcataaatgagt 15154476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25225406 - 25225353
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25225406 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 25225353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38280313 - 38280366
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38280313 atcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagt 38280366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15400940 - 15400887
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  15400940 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 15400887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25761204 - 25761257
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  25761204 atcaaccaatcaaaatataatatacattggcaacattaaatgtcataaatgagt 25761257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39965232 - 39965285
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  39965232 atcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 39965285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 75626 - 75679
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  75626 atcaaccaatcaaaatataatatacattggcaacattaaatatcataaatgagt 75679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2290437 - 2290491
Alignment:
Q  1 atcaaccaatcaaaatgtaa-tatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  2290437 atcaaccaatcaaaatgtaaatatacattgacaacattaaatgtcataaatgagt 2290491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 28390009 - 28390059
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  28390009 aaccaatcaaaatgtaatatacattgacaacattcaatgtcataaatgagt 28390059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42078909 - 42078951
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  42078909 atcaaccaatcaaaatgtaatatacattggcaacattaaatgt 42078951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6647298 - 6647254
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||    
T  6647298 atcaaccaatcaaaatgtaatatatattgacaatattaaatgtca 6647254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3849845 - 3849887
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgt 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  3849845 atcaaccaatcaaaatgtaatatacattgacaacattaaatgt 3849887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7575644 - 7575602
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgt 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  7575644 atcaaccaatcaaaatgtaatatacattgacaacattaaatgt 7575602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4736763 - 4736816
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| |||||| |||||||||||  |||||||||| ||||||||||||    
T  4736763 atcaaccaattaaaatgcaatatatattgcaaacattaaatatcataaatgagt 4736816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27549730 - 27549783
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| ||||||||||||||||| || |  |||||||||||||||||||||||    
T  27549730 atcaactaatcaaaatgtaatatacatcgaaaacattaaatgtcataaatgagt 27549783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3753056 - 3753100
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||    
T  3753056 atcaaccaatcataatgtaatatacattggcaacattgaatgtca 3753100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 3904980 - 3905015
Alignment:
Q  19 aatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||| |||||||||||||||||||||||||||||    
T  3904980 aatatacattggcaacattaaatgtcataaatgagt 3905015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42080908 - 42080862
Alignment:
Q  1 atcaaccaatcaaaatgtaatat--atattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||    
T  42080908 atcaaccaatcaaaatgtaatatacatataggcaacattaaatgtca 42080862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 39773322 - 39773364
Alignment:
Q  13 aaatgtaatatatattggcaacattaaatgtc-ataaatgagt 54  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  39773322 aaatgtaatatacattggcaacattaaatgtcaataaatgagt 39773364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 6644593 - 6644634
Alignment:
Q  4 aaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||| || | |||||||||||||||    
T  6644593 aaccaatcaaaatgtaatatacatagacaacattaaatgtca 6644634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39067094 - 39067143
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaat 50  Q
    ||||| |||| ||||||||||||| ||||  |||||||||||||||||||    
T  39067094 atcaatcaattaaaatgtaatatacattgataacattaaatgtcataaat 39067143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1054868 - 1054824
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||| ||||||||||||| || || ||||||||||||||    
T  1054868 atcaaccaattaaaatgtaatatacataggtaacattaaatgtca 1054824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3907064 - 3907020
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  3907064 atcaaccaatcaaaatgtaatatacataagtaacattaaatgtca 3907020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14006209 - 14006169
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaat 41  Q
    |||||||||||||||||||||||||||  | ||||||||||    
T  14006209 atcaaccaatcaaaatgtaatatatatatgtaacattaaat 14006169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15152424 - 15152468
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| || || || |||||||||||    
T  15152424 atcaaccaatcaaaatgtaatatacataggtaatattaaatgtca 15152468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15398861 - 15398904
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||    
T  15398861 atcaaccaa-caaaatgtaatatatataggtaacattaaatgtca 15398904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36600743 - 36600787
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||||||||||||||||||||||||   | ||||||||||||||    
T  36600743 atcaaccaatcaaaatgtaatatataaatgtaacattaaatgtca 36600787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38282422 - 38282378
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    ||||| |||||||||||||||||| || || ||||||||||||||    
T  38282422 atcaatcaatcaaaatgtaatatacataggtaacattaaatgtca 38282378  T

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Target: scaffold0208 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3913 - 3966
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  3913 atcaatcaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagt 3966  T

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Target: scaffold0208; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5900 - 5856
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  5900 atcaaccaatcaaaatgtaatatacatatgtaacattaaatgtca 5856  T

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Target: scaffold0115 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30703 - 30650
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataaatgagt 54  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  30703 atcaaccaataaaaatgtaatatacattgacaacattaaatgtcataaatgagt 30650  T

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Target: scaffold0259 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6171 - 6127
Alignment:
Q  1 atcaaccaatcaaaatgtaatatatattggcaacattaaatgtca 45  Q
    |||||||||||||||| ||||||| || |||||||||||||||||    
T  6171 atcaaccaatcaaaatttaatatacataggcaacattaaatgtca 6127  T

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