View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2315_low_9 (Length: 255)

Name: NF2315_low_9
Description: NF2315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2315_low_9
NF2315_low_9
[»] scaffold0216 (2 HSPs)
scaffold0216 (69-249)||(12048-12228)
scaffold0216 (17-52)||(11998-12033)
[»] chr7 (5 HSPs)
chr7 (118-215)||(15569550-15569647)
chr7 (105-210)||(13815709-13815814)
chr7 (118-209)||(2609644-2609735)
chr7 (134-210)||(15169935-15170011)
chr7 (137-210)||(32352470-32352543)
[»] chr6 (7 HSPs)
chr6 (105-212)||(3835699-3835806)
chr6 (111-178)||(19973658-19973725)
chr6 (134-215)||(14579619-14579700)
chr6 (111-183)||(19976076-19976148)
chr6 (133-215)||(19697882-19697964)
chr6 (137-215)||(2936184-2936262)
chr6 (100-154)||(24045020-24045074)
[»] chr5 (1 HSPs)
chr5 (115-215)||(13291934-13292034)
[»] chr1 (4 HSPs)
chr1 (134-210)||(43254115-43254191)
chr1 (134-215)||(38825514-38825595)
chr1 (134-188)||(38828751-38828805)
chr1 (146-215)||(9111578-9111646)
[»] chr4 (6 HSPs)
chr4 (134-215)||(31767484-31767565)
chr4 (81-211)||(4747135-4747265)
chr4 (137-215)||(13250561-13250640)
chr4 (136-215)||(895445-895523)
chr4 (133-215)||(44643451-44643533)
chr4 (137-210)||(43287851-43287924)
[»] chr3 (7 HSPs)
chr3 (114-210)||(9372253-9372349)
chr3 (119-188)||(2353181-2353250)
chr3 (134-188)||(14654873-14654927)
chr3 (110-186)||(26445159-26445235)
chr3 (134-215)||(19930072-19930152)
chr3 (133-172)||(16366445-16366484)
chr3 (134-204)||(14658129-14658199)
[»] scaffold0807 (1 HSPs)
scaffold0807 (81-161)||(5390-5470)
[»] chr2 (2 HSPs)
chr2 (111-188)||(27107280-27107357)
chr2 (158-215)||(27083126-27083183)
[»] scaffold0002 (1 HSPs)
scaffold0002 (104-172)||(448691-448759)
[»] scaffold0076 (1 HSPs)
scaffold0076 (111-186)||(6826-6900)
[»] scaffold0028 (2 HSPs)
scaffold0028 (133-215)||(127699-127780)
scaffold0028 (133-215)||(110120-110201)
[»] scaffold0933 (1 HSPs)
scaffold0933 (121-185)||(1111-1175)


Alignment Details
Target: scaffold0216 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 69 - 249
Target Start/End: Original strand, 12048 - 12228
Alignment:
Q  69 tttcatcttatatagaaaataaactttagatttcttggttgtatctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataag 168  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12048 tttcctcttatatagaaaataaactttagattttttggttgtatctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataag 12147  T
Q  169 ggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggattgtgcttttaggcggctaaatccttaaagttaat 249  Q
    |||||||| |||||||||||| |||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||    
T  12148 ggaagaacttgttgtatcctaggatgatatgcgcttgtgaggcggattgcgcttttaggtggctaattccttaaagttaat 12228  T

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Target: scaffold0216; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 11998 - 12033
Alignment:
Q  17 agaaaaagcacgtttataatagaaaacccacctcta 52  Q
    |||||||||||| |||||||||||||||||||||||    
T  11998 agaaaaagcacgcttataatagaaaacccacctcta 12033  T

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Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 15569550 - 15569647
Alignment:
Q  118 gtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||  || |||||| |||| ||||| ||||    
T  15569550 gtgtttaacagattcgagttgttctgtcacctctgatatgattcatatcagagaagaacctgttgtatcctgggaggatatgtgcttatgaggcggat 15569647  T

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Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 13815709 - 13815814
Alignment:
Q  105 ggttgtatctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgctt 204  Q
    ||||| ||||| |||||||||||||||  || |||||||||||||||||| ||||||| || |||||||||| |||||||||||  || |||||||||||    
T  13815709 ggttgcatctcttgtgtttatcagattcaagctgttctgtcacctctgatgtgattcacattagggaagaacatgttgtatcctgggaagatatgcgctt 13815808  T
Q  205 gtgagg 210  Q
     |||||    
T  13815809 atgagg 13815814  T

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Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 2609735 - 2609644
Alignment:
Q  118 gtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgag 209  Q
    ||||||| || ||| ||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||  || ||||||||||| ||||    
T  2609735 gtgtttaacaaattcgagttgttctgtcacatctgatatgattcatatcagagaagaacatgttgtatcctgcgaggatatgcgcttatgag 2609644  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 15169935 - 15170011
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgagg 210  Q
    ||||||||||||| |||||| ||||||||| | || |||||||||||||||||||  || |||||||| || |||||    
T  15169935 agttgttctgtcatctctgacatgattcatgttagagaagaacctgttgtatcctgtgaggatatgcgtttatgagg 15170011  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 32352543 - 32352470
Alignment:
Q  137 tgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgagg 210  Q
    |||||||||||||||||| ||||||||||  | ||||||  |||||| ||||  || ||||||||||| |||||    
T  32352543 tgttctgtcacctctgatgtgattcatatctgagaagaatatgttgtgtcctgggaggatatgcgcttatgagg 32352470  T

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Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 3835806 - 3835699
Alignment:
Q  105 ggttgtatctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgctt 204  Q
    ||||| ||||| ||||||||||| |||  ||||||||||||||||||||||||||| |||| || ||||||  ||||||||||| ||| |||||||||||    
T  3835806 ggttgcatctcttgtgtttatcaaattcaagttgttctgtcacctctgatatgatttatatcagagaagaatttgttgtatcctgagaggatatgcgctt 3835707  T
Q  205 gtgaggtg 212  Q
     |||||||    
T  3835706 atgaggtg 3835699  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 19973658 - 19973725
Alignment:
Q  111 atctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacct 178  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||| || |||||||||    
T  19973658 atctcctgtgtttatcaaattcgagttgttctgtcacctctgatttgattcatatcagagaagaacct 19973725  T

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Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 14579619 - 14579700
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    |||||||||||||||||| | ||||||||| | || ||||||||||||||||||| ||| ||||| ||||| ||||| ||||    
T  14579619 agttgttctgtcacctcttacatgattcatgtcagagaagaacctgttgtatcctgagaggatattcgcttatgaggcggat 14579700  T

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Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 19976076 - 19976148
Alignment:
Q  111 atctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgt 183  Q
    ||||| |||| |||||| ||| ||||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  19976076 atctcctgtggttatcaaattcgagttgttctgtcacctttaatatgattcatatcagagaagaatctgttgt 19976148  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 19697964 - 19697882
Alignment:
Q  133 gagttgttctgtcacctctgat-atgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    |||||||||||||||||| ||| ||||||||||   ||||||||| |||||||||||  || ||||||||||| ||||| ||||    
T  19697964 gagttgttctgtcacctccgattatgattcataacggggaagaac-tgttgtatcctgggaggatatgcgcttatgaggcggat 19697882  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 2936262 - 2936184
Alignment:
Q  137 tgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    |||||||||||||||||| ||||| |||| || ||||||| ||| ||||| | | | ||||||||||| ||||| ||||    
T  2936262 tgttctgtcacctctgatgtgatttatatcagagaagaacatgtggtatcttgaaaagatatgcgcttatgaggcggat 2936184  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 24045074 - 24045020
Alignment:
Q  100 ttcttggttgtatctcatgtgtttatcagattggagttgttctgtcacctctgat 154  Q
    |||| ||||| ||||| ||||||||||| |||  |||||||||||||||||||||    
T  24045074 ttctgggttgcatctcctgtgtttatcatatttaagttgttctgtcacctctgat 24045020  T

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Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 13291934 - 13292034
Alignment:
Q  115 catgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtgga 214  Q
    ||||| ||||||| ||| |||||||||| |||||||||||||||||||||| || ||| |||||||||||||||  || ||||||||||| ||||| |||    
T  13291934 catgtatttatcaaattcgagttgttctatcacctctgatatgattcatatcagagaataacctgttgtatcctgggaggatatgcgcttatgaggcgga 13292033  T
Q  215 t 215  Q
    |    
T  13292034 t 13292034  T

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Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 43254115 - 43254191
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgagg 210  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  || ||||||||||| |||||    
T  43254115 agttgttctgtcacctctgatatgattcatatatgggaagaacatgttgtatcctgggaggatatgcgcttatgagg 43254191  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 38825595 - 38825514
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    |||||||||| ||||| ||||||||||||||  || ||||||| |||||||||||  || |||||||| || ||||| ||||    
T  38825595 agttgttctgccacctttgatatgattcatagcagagaagaacttgttgtatcctgggaggatatgcgtttatgaggaggat 38825514  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 38828805 - 38828751
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcct 188  Q
    |||||||||| || |||||||||||||||||  |||||||||| |||| ||||||    
T  38828805 agttgttctgccaactctgatatgattcatagtagggaagaacttgttttatcct 38828751  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 9111646 - 9111578
Alignment:
Q  146 acctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    ||||||||||||||| |||| || ||||||| |||||||||||  || ||||||||||| ||||| ||||    
T  9111646 acctctgatatgatttatatcagtgaagaac-tgttgtatcctgggaagatatgcgcttatgaggcggat 9111578  T

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Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 31767565 - 31767484
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| || |||||| |||| ||||| ||||    
T  31767565 agttgttctgtcacctctgatgtgattcatatcagggaagaacatgttgtatcctaggaggatatgtgcttatgaggcggat 31767484  T

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Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 4747135 - 4747265
Alignment:
Q  81 tagaaaataaactttagatttcttggttgtatc--tcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacct 178  Q
    |||||||| |||||||| |||| ||| || |||  |||||||||||| |||||  ||||||||||||||||  ||||||||||||| ||| |||||||||    
T  4747135 tagaaaatcaactttaggtttcatgggtgcatcattcatgtgtttatgagattcaagttgttctgtcacct--gatatgattcatacaagcgaagaacct 4747232  T
Q  179 gttgtatcctaagatgatatgcgcttgtgaggt 211  Q
    |||||||| |  || ||||| ||||| ||||||    
T  4747233 gttgtatcttgggaggatatacgcttatgaggt 4747265  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 13250640 - 13250561
Alignment:
Q  137 tgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaag-atgatatgcgcttgtgaggtggat 215  Q
    |||||||||||| ||||| |||||||||| |||||||||| | |||||||||||| | ||||||||||| ||||||||||    
T  13250640 tgttctgtcaccactgatgtgattcatatcagggaagaacatattgtatcctaagaaggatatgcgcttatgaggtggat 13250561  T

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Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 895445 - 895523
Alignment:
Q  136 ttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    ||||||| |||||||||||||||||||||| ||||||||| || |||||||||  || ||||||||||| ||||| ||||    
T  895445 ttgttctatcacctctgatatgattcatattagggaagaa-cttttgtatcctgggaggatatgcgcttatgaggcggat 895523  T

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Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 44643451 - 44643533
Alignment:
Q  133 gagttgttctgtcacctctgat-atgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    |||||||||||||| ||||| | |||||||||||  ||||||||| |||||||||||| || ||||||||||| ||||| ||||    
T  44643451 gagttgttctgtcatctctggttatgattcatatcggggaagaac-tgttgtatcctaggaggatatgcgcttatgaggcggat 44643533  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 43287851 - 43287924
Alignment:
Q  137 tgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgagg 210  Q
    |||||||||||||||||| ||||||||||  | ||||||  |||||||||||   | ||||||||||| |||||    
T  43287851 tgttctgtcacctctgatgtgattcatatctgagaagaatatgttgtatcctggaaagatatgcgcttatgagg 43287924  T

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Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 9372349 - 9372253
Alignment:
Q  114 tcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgagg 210  Q
    |||||||||||||| |||  ||||| | |||||||||| ||||||||||||| ||||| ||||||||||||||||  || ||||||||||| |||||    
T  9372349 tcatgtgtttatcaaatttaagttgctttgtcacctctcatatgattcatatcagggatgaacctgttgtatcctgggacgatatgcgcttatgagg 9372253  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 2353181 - 2353250
Alignment:
Q  119 tgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcct 188  Q
    ||||||||| |||  |||||||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  2353181 tgtttatcaaattcaagttgttctgtcacctcttatatgattcatatcagagaagaacctgttgtatcct 2353250  T

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Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 14654873 - 14654927
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcct 188  Q
    |||||||||||||||||||| ||||||||| | || |||||||||||||||||||    
T  14654873 agttgttctgtcacctctgacatgattcatgtcagagaagaacctgttgtatcct 14654927  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 26445235 - 26445159
Alignment:
Q  110 tatctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatc 186  Q
    |||||| |||||||| || |||  | ||||| |||| ||||||||||||||||||| |||||||||| |||||||||    
T  26445235 tatctcctgtgtttagcaaattcaaattgttatgtcgcctctgatatgattcatatcagggaagaacatgttgtatc 26445159  T

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Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 19930152 - 19930072
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    ||||||||| ||||||||||| |||||||| | |||||||||| |||||||| ||  || ||||||||||| ||||| ||||    
T  19930152 agttgttctatcacctctgatgtgattcatctcagggaagaacatgttgtat-ctgggaggatatgcgcttatgaggcggat 19930072  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 16366484 - 16366445
Alignment:
Q  133 gagttgttctgtcacctctgatatgattcatataagggaa 172  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  16366484 gagttgttctgtcacctttgatatgattcatattagggaa 16366445  T

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Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 14658129 - 14658199
Alignment:
Q  134 agttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgctt 204  Q
    |||||||||||||||||||| ||||||||| | || ||||||  |||||||||||   | |||||||||||    
T  14658129 agttgttctgtcacctctgacatgattcatgttagagaagaatttgttgtatcctggaaggatatgcgctt 14658199  T

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Target: scaffold0807 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 5470 - 5390
Alignment:
Q  81 tagaaaataaactttagatttcttggttgtatctcatgtgtttatcagattggagttgttctgtcacctctgatatgattc 161  Q
    ||||||||||| |||||||||||||| || ||||||||||||||| | |||  ||||||| |||||||||| |||||||||    
T  5470 tagaaaataaagtttagatttcttgggtgcatctcatgtgtttattatattcaagttgttttgtcacctcttatatgattc 5390  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 27107280 - 27107357
Alignment:
Q  111 atctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcct 188  Q
    ||||| |||||||||||||||  || |||||||||||||||||| ||||| | || |||||||||| |||||||||||    
T  27107280 atctcctgtgtttatcagattcaagctgttctgtcacctctgatgtgatttacatcagggaagaacatgttgtatcct 27107357  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 27083183 - 27083126
Alignment:
Q  158 attcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    |||||||| ||||||||||||||||||||||  || ||||||||||||||||| ||||    
T  27083183 attcatattagggaagaacctgttgtatcctgggaggatatgcgcttgtgaggcggat 27083126  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 448691 - 448759
Alignment:
Q  104 tggttgtatctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaa 172  Q
    |||||| ||||| |||||||||||||||  ||||||| |||||||| ||||||||||||||| ||||||    
T  448691 tggttgcatctcctgtgtttatcagattcaagttgttttgtcacctttgatatgattcatattagggaa 448759  T

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Target: scaffold0076 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 6900 - 6826
Alignment:
Q  111 atctcatgtgtttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatc 186  Q
    ||||| ||||||||||| |||  ||||||||||||| |||||||||||||||||| |||||| || ||||||||||    
T  6900 atctcctgtgtttatcaaattcaagttgttctgtcatctctgatatgattcatatcagggaa-aaactgttgtatc 6826  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 127699 - 127780
Alignment:
Q  133 gagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |  || |||||||| || ||||| ||||    
T  127699 gagttgttctgtcacctctgacatgattcatatcagggaagaa-ctgttgtatcatgggaggatatgcgtttctgaggcggat 127780  T

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Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 110120 - 110201
Alignment:
Q  133 gagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtatcctaagatgatatgcgcttgtgaggtggat 215  Q
    ||||||||||||||||||||| ||||||||||| || |||||| |||||||||| |  || |||||||| || ||||| ||||    
T  110120 gagttgttctgtcacctctgacatgattcatatcagcgaagaa-ctgttgtatcttgggaggatatgcgtttatgaggcggat 110201  T

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Target: scaffold0933 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 1175 - 1111
Alignment:
Q  121 tttatcagattggagttgttctgtcacctctgatatgattcatataagggaagaacctgttgtat 185  Q
    |||||||||||  ||||| |||||| | |||||| |||||||||| |||||||||| ||||||||    
T  1175 tttatcagattcaagttgctctgtcgcatctgatgtgattcatattagggaagaacatgttgtat 1111  T

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