View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2316_high_7 (Length: 248)
Name: NF2316_high_7
Description: NF2316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2316_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 26563451 - 26563682
Alignment:
| Q |
12 |
aagaacaaatcttacttaggttcgaacttacaaaaaagatgatgtagaagccacatgcaaaaatgaattttaagacttagttgttgacaatatattaaaa |
111 |
Q |
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| T |
26563451 |
aagaacaaatcttacttaggttcgaacttacaaaaaagatgatgtagaagccacatgcaaaaatgaattttaagacttagttgttgactatatattaaaa |
26563550 |
T |
|
| Q |
112 |
aataattataaggcaatgtgagagatccatttaaaaaattatataaagatgcaactgttcattattccaatttatataccatatactgtccaaaccaagt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26563551 |
aataattataaggcaatgtgagagatccatttaaaaaattatataaagatgcaactgttcattattccaatttatataccatatactgtccaaaccaagt |
26563650 |
T |
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| Q |
212 |
atatatataataacataggctattgaaacacttgt |
246 |
Q |
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|||||| |||||||||||||||||||||||||| |
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| T |
26563651 |
atatat---ataacataggctattgaaacacttgt |
26563682 |
T |
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