View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2316_high_8 (Length: 237)
Name: NF2316_high_8
Description: NF2316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2316_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 31524256 - 31524475
Alignment:
| Q |
1 |
tttagccctagaactcaacattccgaaattcgtttacgtagcttcacatgcttggtttctttccctgtacgtgtattctcctgttttggacaaacaaatc |
100 |
Q |
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|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524256 |
tttagccctagaactcaacattccgagattcatttacgtagcttcacatgcttggtttctttccctgtacgtgtattctcctgttttggacaaacaaatc |
31524355 |
T |
|
| Q |
101 |
caaggaccatacattgagaagaaagaacctttgaaaatcccgggttgtaaatcagttcaaccaaatgacttggttgatccaatgctggaccggtacaact |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524356 |
caaggaccatacattgagcagaaagaacctttgaaaatcccgggttgtaaatcagttcaaccaaatgacttggttgatccaatgctggaccggtacaact |
31524455 |
T |
|
| Q |
201 |
tggagtataaagagtactta |
220 |
Q |
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|||||||||||||||||||| |
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| T |
31524456 |
tggagtataaagagtactta |
31524475 |
T |
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