View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2317_high_12 (Length: 255)
Name: NF2317_high_12
Description: NF2317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2317_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 45560266 - 45560492
Alignment:
| Q |
11 |
cagagaagcttagatgagaattcattgatgggaatagcaacccaagtttggatgttaaaatcagtagctagattgtaactttaccaagctctagcattta |
110 |
Q |
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| T |
45560266 |
cagagaagcttagatgagaattcattgatgggaatagcaacccaagtttggatgttaaaatcagtagctagattgtaactttaccaagctctagcattta |
45560365 |
T |
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| Q |
111 |
aaatgagtaggagaatgacattttaattgaccaaatattttaccaaaaataagtatttcaattcaatggggtaagtaaaaagggataataacgtccatgt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
45560366 |
aaatgagtaggagaatgacattttaattgaccaaatattttaccaaaaataagtatttcaattcaatggggtaagtaaaaagggataaaaacgtccatgt |
45560465 |
T |
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| Q |
211 |
gcttctgggttgtctttgataagcaac |
237 |
Q |
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||||||||||||||||||||||||||| |
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| T |
45560466 |
gcttctgggttgtctttgataagcaac |
45560492 |
T |
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