View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2317_low_18 (Length: 249)
Name: NF2317_low_18
Description: NF2317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2317_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 20870350 - 20870120
Alignment:
| Q |
1 |
ctatttagttactccctctaatctaaaaattttcaagatcaaagaaatgcattgaaatggttaattgtaattgatggtacaattttgaaattattctaaa |
100 |
Q |
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| T |
20870350 |
ctatttagttactccctctaatctaaaaattttcaagatcaaagaaatgcattgaaatggttaattgtaattgatggtacaattttgaatttattctaaa |
20870251 |
T |
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| Q |
101 |
attagcctttggtgtcttttcatatctttcttggataagacatgaatattattaataatgttgaaaattaccaaatggagtagtttgttatatatataag |
200 |
Q |
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| T |
20870250 |
cttagcctttggtgtcttttcatatctttcttggataagacatgaatattattaataatgttgaaaatgaccaaatggagtagtttgttatatatataag |
20870151 |
T |
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| Q |
201 |
aaccaaaatttgcaatattttgattcgcata |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
20870150 |
aaccaaaatttgcaatattttgattcgcata |
20870120 |
T |
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