View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2322_low_2 (Length: 489)
Name: NF2322_low_2
Description: NF2322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2322_low_2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 476; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 10 - 489
Target Start/End: Original strand, 43175599 - 43176078
Alignment:
| Q |
10 |
agaacctgtgtatatcattagtaattccttaagtgtctaacttattattactagttattagacatgatttttgtttacctaagtttatgcaaatgttctg |
109 |
Q |
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| T |
43175599 |
agaacttgtgtatatcattagtaattccttaagtgtctaacttattattactagttattagacatgatttttgtttacctaagtttatgcaaatgttctg |
43175698 |
T |
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| Q |
110 |
tcaaataacatcaactgtgcctcaacatggaaggtcgtgagatatgtaaattgccagattcattcaaaatttaaccaattcaatttttctcaaaatctaa |
209 |
Q |
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| T |
43175699 |
tcaaataacatcaactgtgcctcaacatggaaggtcgtgagatatgtaaattgccagattcattcaaaatttaaccaattcaatttttctcaaaatctaa |
43175798 |
T |
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| Q |
210 |
ttcataataattacactccgatctctggtttatacatccatgttgtcaaggcacgatagtccaattactaattttgtgctgaacatttgaatggcatgat |
309 |
Q |
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| T |
43175799 |
ttcataataattacactccgatctctggtttatacatccatgttgtcaaggcacgatagtccaattactaattttgtgctgaacatttgaatggcatgat |
43175898 |
T |
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| Q |
310 |
atttttccagtctgaatgaaatatggttatcctatacctccaagttagaaagaagatatttttgtactgacaatatcatatttcattccattagtattag |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43175899 |
atttttccagtctgaatgaaatatggttatcctatacctccaagttagaaagaagatatttttgtactgacaatatcatatttcattccattagtattag |
43175998 |
T |
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| Q |
410 |
tttttagaagttcaacaaatgaattggtaaattcattctatttgcccttgtcaaggaccaaaggggtaaaatggggtatc |
489 |
Q |
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| T |
43175999 |
tttttagaagttcaacaaatgaattggtaaattcattctatttgcccttgtcaaggaccaaaggggtaaaatggggtatc |
43176078 |
T |
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