View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2323_low_10 (Length: 321)

Name: NF2323_low_10
Description: NF2323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2323_low_10
NF2323_low_10
[»] chr3 (50 HSPs)
chr3 (129-307)||(19658666-19658846)
chr3 (129-304)||(19630830-19631010)
chr3 (129-307)||(1463197-1463377)
chr3 (163-303)||(12410897-12411042)
chr3 (173-301)||(14312479-14312612)
chr3 (163-301)||(11207162-11207305)
chr3 (163-303)||(15960527-15960672)
chr3 (84-132)||(20493083-20493131)
chr3 (173-303)||(15652174-15652309)
chr3 (173-301)||(13262740-13262873)
chr3 (84-128)||(20294097-20294141)
chr3 (84-136)||(8984458-8984512)
chr3 (163-221)||(16881065-16881123)
chr3 (84-132)||(4781401-4781450)
chr3 (84-131)||(16127542-16127591)
chr3 (174-303)||(17016813-17016947)
chr3 (84-131)||(2487829-2487877)
chr3 (173-301)||(8997018-8997151)
chr3 (84-131)||(13118400-13118448)
chr3 (84-131)||(24814894-24814942)
chr3 (84-131)||(24872177-24872225)
chr3 (84-131)||(49386333-49386381)
chr3 (84-132)||(1684209-1684259)
chr3 (243-301)||(1785144-1785205)
chr3 (243-301)||(9381731-9381792)
chr3 (177-253)||(14078561-14078639)
chr3 (84-132)||(16334374-16334424)
chr3 (163-198)||(18696197-18696232)
chr3 (84-131)||(682768-682817)
chr3 (84-131)||(4023079-4023128)
chr3 (84-131)||(4372600-4372649)
chr3 (84-131)||(4382341-4382390)
chr3 (263-301)||(4432889-4432927)
chr3 (84-131)||(6423364-6423413)
chr3 (84-131)||(6433791-6433840)
chr3 (84-131)||(8973903-8973952)
chr3 (84-131)||(9538192-9538241)
chr3 (84-131)||(9548518-9548567)
chr3 (84-131)||(12794400-12794449)
chr3 (84-131)||(20743661-20743710)
chr3 (173-303)||(29934628-29934763)
chr3 (173-303)||(29983782-29983917)
chr3 (84-131)||(38816904-38816953)
chr3 (245-301)||(7795688-7795747)
chr3 (245-301)||(8741209-8741268)
chr3 (163-253)||(16306246-16306338)
chr3 (84-131)||(10944-10992)
chr3 (173-301)||(1063172-1063305)
chr3 (129-197)||(13930780-13930848)
chr3 (84-131)||(14801383-14801431)
[»] chr4 (35 HSPs)
chr4 (130-307)||(17527513-17527694)
chr4 (129-240)||(13694974-13695087)
chr4 (84-132)||(3475042-3475090)
chr4 (163-301)||(3389489-3389632)
chr4 (84-132)||(10422843-10422892)
chr4 (243-301)||(14837179-14837240)
chr4 (84-131)||(521148-521196)
chr4 (84-131)||(2831046-2831094)
chr4 (163-303)||(14903552-14903697)
chr4 (84-131)||(17144791-17144839)
chr4 (84-131)||(30652727-30652775)
chr4 (84-132)||(3495724-3495774)
chr4 (84-132)||(6693275-6693325)
chr4 (243-301)||(16316450-16316511)
chr4 (84-132)||(27679527-27679577)
chr4 (84-132)||(40922900-40922950)
chr4 (84-131)||(518641-518690)
chr4 (84-131)||(3486402-3486451)
chr4 (84-131)||(5291863-5291912)
chr4 (84-131)||(5301522-5301571)
chr4 (84-131)||(6703681-6703730)
chr4 (84-131)||(7842812-7842861)
chr4 (84-129)||(7845695-7845741)
chr4 (84-131)||(16081235-16081284)
chr4 (84-131)||(16250506-16250555)
chr4 (84-131)||(16630593-16630642)
chr4 (84-131)||(17420255-17420304)
chr4 (84-131)||(17826951-17827000)
chr4 (84-131)||(17836342-17836391)
chr4 (84-131)||(21847346-21847395)
chr4 (84-131)||(21856938-21856987)
chr4 (84-131)||(21903209-21903258)
chr4 (84-131)||(21912801-21912850)
chr4 (84-131)||(27689183-27689232)
chr4 (173-301)||(11470320-11470453)
[»] scaffold0498 (1 HSPs)
scaffold0498 (129-253)||(4452-4578)
[»] scaffold0015 (1 HSPs)
scaffold0015 (163-303)||(190145-190289)
[»] chr1 (35 HSPs)
chr1 (163-303)||(22958906-22959050)
chr1 (162-221)||(9345592-9345651)
chr1 (163-253)||(27857606-27857697)
chr1 (84-132)||(2369375-2369423)
chr1 (84-132)||(49336820-49336868)
chr1 (84-131)||(2117914-2117963)
chr1 (265-303)||(18613836-18613874)
chr1 (84-131)||(21904280-21904329)
chr1 (84-132)||(26192208-26192257)
chr1 (84-131)||(18095873-18095921)
chr1 (84-137)||(20315491-20315546)
chr1 (84-131)||(21820404-21820452)
chr1 (84-131)||(22401557-22401605)
chr1 (84-131)||(22961963-22962011)
chr1 (84-131)||(42035276-42035324)
chr1 (84-131)||(52948651-52948699)
chr1 (84-132)||(30548576-30548626)
chr1 (84-131)||(1973636-1973685)
chr1 (84-131)||(1988423-1988472)
chr1 (84-131)||(13966110-13966159)
chr1 (84-131)||(16155940-16155989)
chr1 (173-303)||(20874332-20874467)
chr1 (84-131)||(21459685-21459734)
chr1 (84-131)||(25020525-25020574)
chr1 (84-131)||(25868406-25868455)
chr1 (84-131)||(27067140-27067189)
chr1 (84-131)||(37013411-37013460)
chr1 (84-131)||(41200891-41200940)
chr1 (84-129)||(41542784-41542830)
chr1 (84-132)||(25822286-25822335)
chr1 (84-131)||(8541259-8541307)
chr1 (84-131)||(8606498-8606546)
chr1 (84-123)||(12420468-12420508)
chr1 (84-123)||(25038355-25038395)
chr1 (84-123)||(25043567-25043607)
[»] chr7 (42 HSPs)
chr7 (163-253)||(16463848-16463940)
chr7 (163-221)||(16308974-16309032)
chr7 (84-131)||(12771148-12771195)
chr7 (173-301)||(18440214-18440347)
chr7 (84-132)||(42622152-42622200)
chr7 (84-131)||(5380769-5380817)
chr7 (84-131)||(5614405-5614453)
chr7 (84-131)||(7018361-7018409)
chr7 (84-131)||(7033719-7033767)
chr7 (84-131)||(9534192-9534240)
chr7 (84-131)||(9544475-9544523)
chr7 (84-131)||(10610739-10610787)
chr7 (84-131)||(12088392-12088440)
chr7 (163-303)||(16106213-16106358)
chr7 (84-131)||(31825779-31825827)
chr7 (243-301)||(9169272-9169333)
chr7 (84-132)||(13130897-13130947)
chr7 (87-135)||(32109877-32109927)
chr7 (84-132)||(46508783-46508833)
chr7 (84-131)||(5390406-5390455)
chr7 (84-131)||(6535541-6535590)
chr7 (84-131)||(6545862-6545911)
chr7 (84-131)||(8502106-8502155)
chr7 (84-131)||(8512576-8512625)
chr7 (84-131)||(11625320-11625369)
chr7 (84-131)||(13284658-13284707)
chr7 (84-131)||(16130870-16130919)
chr7 (84-131)||(16141419-16141468)
chr7 (84-131)||(24539417-24539466)
chr7 (84-131)||(27990154-27990203)
chr7 (84-131)||(43984720-43984769)
chr7 (84-131)||(45554617-45554666)
chr7 (84-131)||(46498171-46498220)
chr7 (87-131)||(15987617-15987662)
chr7 (84-132)||(8341266-8341313)
chr7 (84-123)||(19586807-19586847)
chr7 (84-131)||(19801160-19801208)
chr7 (84-131)||(26304612-26304662)
chr7 (84-131)||(26308172-26308222)
chr7 (84-131)||(26362156-26362206)
chr7 (84-131)||(44898355-44898405)
chr7 (84-131)||(44908780-44908830)
[»] chr5 (30 HSPs)
chr5 (163-303)||(20966833-20966978)
chr5 (173-301)||(21704902-21705035)
chr5 (84-131)||(36317508-36317555)
chr5 (163-297)||(20553009-20553148)
chr5 (84-131)||(204616-204664)
chr5 (243-301)||(23393599-23393660)
chr5 (84-132)||(31917872-31917921)
chr5 (84-131)||(4037127-4037175)
chr5 (84-123)||(19547408-19547448)
chr5 (84-131)||(19886836-19886884)
chr5 (84-133)||(33950777-33950828)
chr5 (243-301)||(24982420-24982481)
chr5 (84-131)||(11410064-11410113)
chr5 (84-131)||(13570826-13570875)
chr5 (84-131)||(18208409-18208458)
chr5 (84-131)||(18217747-18217796)
chr5 (84-131)||(20948913-20948962)
chr5 (84-131)||(20959282-20959331)
chr5 (84-131)||(21683246-21683295)
chr5 (84-131)||(21754595-21754644)
chr5 (84-131)||(21763882-21763931)
chr5 (84-131)||(26190978-26191027)
chr5 (84-131)||(26201560-26201609)
chr5 (84-131)||(27413205-27413254)
chr5 (84-131)||(30942437-30942486)
chr5 (84-131)||(30951859-30951908)
chr5 (84-131)||(32071496-32071545)
chr5 (84-131)||(33940377-33940426)
chr5 (84-131)||(37646479-37646528)
chr5 (84-131)||(37818659-37818709)
[»] chr2 (36 HSPs)
chr2 (163-303)||(21916867-21917012)
chr2 (163-303)||(21919195-21919340)
chr2 (173-301)||(26878668-26878801)
chr2 (163-301)||(28722405-28722548)
chr2 (84-131)||(19343377-19343424)
chr2 (84-131)||(29424414-29424461)
chr2 (84-128)||(12580378-12580422)
chr2 (173-303)||(22773364-22773499)
chr2 (84-131)||(38956720-38956769)
chr2 (84-132)||(4469063-4469112)
chr2 (163-212)||(10899730-10899779)
chr2 (243-303)||(24416111-24416174)
chr2 (84-131)||(574739-574787)
chr2 (84-137)||(3604507-3604564)
chr2 (84-131)||(24695456-24695504)
chr2 (163-195)||(25119601-25119633)
chr2 (84-131)||(27158874-27158922)
chr2 (84-131)||(32877770-32877818)
chr2 (84-131)||(37861986-37862034)
chr2 (173-253)||(22257020-22257102)
chr2 (84-131)||(2997570-2997619)
chr2 (84-131)||(4459438-4459487)
chr2 (84-131)||(5335732-5335781)
chr2 (84-131)||(5345584-5345633)
chr2 (84-131)||(16901090-16901139)
chr2 (84-131)||(16994481-16994530)
chr2 (84-131)||(18652275-18652324)
chr2 (84-131)||(18664393-18664442)
chr2 (84-131)||(22671481-22671530)
chr2 (84-131)||(22678620-22678669)
chr2 (84-131)||(27169221-27169270)
chr2 (84-131)||(29115227-29115276)
chr2 (84-131)||(32935657-32935706)
chr2 (84-133)||(45191896-45191946)
chr2 (84-132)||(6875855-6875903)
chr2 (84-131)||(22907745-22907793)
[»] scaffold0068 (2 HSPs)
scaffold0068 (173-301)||(8875-9008)
scaffold0068 (84-131)||(30615-30664)
[»] chr8 (23 HSPs)
chr8 (173-303)||(22148705-22148840)
chr8 (174-253)||(24667263-24667344)
chr8 (240-304)||(24633022-24633086)
chr8 (86-131)||(11429421-11429466)
chr8 (173-301)||(3842567-3842700)
chr8 (243-301)||(16746111-16746172)
chr8 (265-303)||(22462647-22462685)
chr8 (84-131)||(23014006-23014054)
chr8 (84-131)||(31998194-31998242)
chr8 (163-198)||(24679608-24679643)
chr8 (84-131)||(3988572-3988621)
chr8 (84-131)||(8669004-8669053)
chr8 (84-131)||(9323990-9324039)
chr8 (84-131)||(12900260-12900309)
chr8 (84-131)||(13675820-13675869)
chr8 (86-131)||(14438487-14438533)
chr8 (84-131)||(16583013-16583062)
chr8 (84-131)||(21201789-21201838)
chr8 (84-131)||(21212205-21212254)
chr8 (84-131)||(21335355-21335404)
chr8 (84-131)||(21462165-21462214)
chr8 (84-131)||(21986701-21986750)
chr8 (84-131)||(21996235-21996284)
[»] scaffold0014 (2 HSPs)
scaffold0014 (84-123)||(147767-147806)
scaffold0014 (84-133)||(232949-233000)
[»] chr6 (31 HSPs)
chr6 (129-212)||(18092679-18092762)
chr6 (173-303)||(25725577-25725712)
chr6 (84-131)||(16322382-16322430)
chr6 (84-131)||(16334530-16334578)
chr6 (90-131)||(29541512-29541553)
chr6 (84-131)||(7753677-7753725)
chr6 (84-131)||(18705278-18705326)
chr6 (84-131)||(18711213-18711261)
chr6 (84-131)||(30656833-30656881)
chr6 (84-132)||(14792659-14792709)
chr6 (163-206)||(17446931-17446974)
chr6 (84-131)||(3286903-3286952)
chr6 (84-131)||(12988812-12988861)
chr6 (84-131)||(16899003-16899052)
chr6 (84-131)||(16909656-16909705)
chr6 (84-131)||(18202607-18202656)
chr6 (84-131)||(20913339-20913388)
chr6 (84-131)||(24502531-24502580)
chr6 (84-131)||(26019361-26019410)
chr6 (84-131)||(26439886-26439935)
chr6 (84-131)||(31358618-31358667)
chr6 (84-131)||(31368348-31368397)
chr6 (84-131)||(34766414-34766463)
chr6 (173-286)||(17609686-17609804)
chr6 (163-212)||(19874686-19874735)
chr6 (84-132)||(26512507-26512558)
chr6 (84-132)||(26517623-26517674)
chr6 (88-131)||(789963-790007)
chr6 (84-131)||(19364130-19364178)
chr6 (86-131)||(24929989-24930036)
chr6 (84-120)||(30636889-30636925)
[»] scaffold0121 (1 HSPs)
scaffold0121 (85-131)||(5957-6003)
[»] scaffold0042 (1 HSPs)
scaffold0042 (173-301)||(4311-4444)
[»] scaffold0047 (2 HSPs)
scaffold0047 (243-301)||(34013-34074)
scaffold0047 (84-131)||(73686-73734)
[»] scaffold0034 (1 HSPs)
scaffold0034 (84-131)||(8481-8528)
[»] scaffold0873 (1 HSPs)
scaffold0873 (84-132)||(4756-4805)
[»] scaffold0265 (1 HSPs)
scaffold0265 (84-131)||(12357-12405)
[»] scaffold0141 (1 HSPs)
scaffold0141 (84-131)||(19833-19881)
[»] scaffold0084 (1 HSPs)
scaffold0084 (173-301)||(57893-58026)
[»] scaffold0058 (2 HSPs)
scaffold0058 (84-131)||(27973-28021)
scaffold0058 (84-131)||(49178-49226)
[»] scaffold0005 (1 HSPs)
scaffold0005 (84-131)||(308983-309031)
[»] scaffold0002 (1 HSPs)
scaffold0002 (84-131)||(394819-394867)
[»] scaffold0043 (2 HSPs)
scaffold0043 (129-253)||(2910-3036)
scaffold0043 (84-131)||(91837-91886)
[»] scaffold0018 (1 HSPs)
scaffold0018 (84-131)||(61080-61127)
[»] scaffold2147 (1 HSPs)
scaffold2147 (84-131)||(22-71)
[»] scaffold0811 (1 HSPs)
scaffold0811 (84-131)||(2327-2376)
[»] scaffold0758 (1 HSPs)
scaffold0758 (163-197)||(3170-3204)
[»] scaffold0591 (1 HSPs)
scaffold0591 (84-131)||(274-323)
[»] scaffold0343 (1 HSPs)
scaffold0343 (84-131)||(14892-14941)
[»] scaffold0313 (2 HSPs)
scaffold0313 (84-131)||(6826-6875)
scaffold0313 (84-131)||(10608-10657)
[»] scaffold0308 (1 HSPs)
scaffold0308 (84-131)||(20029-20078)
[»] scaffold0118 (1 HSPs)
scaffold0118 (84-131)||(9197-9246)
[»] scaffold0116 (1 HSPs)
scaffold0116 (265-303)||(22081-22119)
[»] scaffold0012 (1 HSPs)
scaffold0012 (173-303)||(11438-11573)
[»] scaffold0009 (1 HSPs)
scaffold0009 (86-132)||(267039-267085)
[»] scaffold0360 (1 HSPs)
scaffold0360 (84-131)||(1329-1377)
[»] scaffold0335 (1 HSPs)
scaffold0335 (84-131)||(13897-13945)
[»] scaffold0059 (1 HSPs)
scaffold0059 (84-123)||(39535-39575)
[»] scaffold0031 (1 HSPs)
scaffold0031 (84-131)||(110728-110776)


Alignment Details
Target: chr3 (Bit Score: 94; Significance: 7e-46; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 129 - 307
Target Start/End: Complemental strand, 19658846 - 19658666
Alignment:
Q  129 tcatcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctt 226  Q
    ||||||| |||||||||||| ||| ||||| |  ||||||||| |||||||||||| |||| ||||||||||| ||||| |||| ||||  |||||||||    
T  19658846 tcatctttaagtattctttgtaaggtagagcagcaacaagaattcctctgatcttgcgatggttcttgtagagattcttctgagtagcattgtgtttctt 19658747  T
Q  227 tctgtcagcaacaacaccttcttcatccaaaaccagatcaacaccatcttcaagaatatctcatagttcttcatctatgcc 307  Q
    ||| |||  ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  19658746 tctatcaaaaactacaccttcttcatccaaaacaagatcaacaccatcttcaagaatatcccataattcttcatctatgcc 19658666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 129 - 304
Target Start/End: Complemental strand, 19631010 - 19630830
Alignment:
Q  129 tcatcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatg---agaagcagtgt--tt 223  Q
    ||||||||||| ||||||||  || ||||| || ||||||||| |||| |||||||||||||||||||||||||||||| |    || ||||||||  ||    
T  19631010 tcatcttcaagcattctttgtgaggtagagcaacaacaagaattcctccgatcttgtgatgtttcttgtagagcttcttcttctaagtagcagtgtgttt 19630911  T
Q  224 ctttctgtcagcaacaacaccttcttcatccaaaaccagatcaacaccatcttcaagaatatctcatagttcttcatctat 304  Q
    |||| | ||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  19630910 ctttatatcaacaactacaccttcttcatccaaaacaagatcaacaccatcttcaagaatatcccataattcttcatctat 19630830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 307
Target Start/End: Original strand, 1463197 - 1463377
Alignment:
Q  129 tcatcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctt 226  Q
    ||||||||||||||||||||  || ||  | || ||||||||| ||||||||||||||||||||||||||||||||||| |||| | ||  |||||||||    
T  1463197 tcatcttcaagtattctttgtgaggtaatgcaacaacaagaattcctctgatcttgtgatgtttcttgtagagcttcttctgagcaacattgtgtttctt 1463296  T
Q  227 tctgtcagcaacaacaccttcttcatccaaaaccagatcaacaccatcttcaagaatatctcatagttcttcatctatgcc 307  Q
    ||| |||  | | ||||||||||||||||||   ||||||||| ||||||| |||||||| ||||  ||||||| ||||||    
T  1463297 tctatcaatagctacaccttcttcatccaaagtaagatcaacatcatcttcgagaatatcccataactcttcatttatgcc 1463377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 12411042 - 12410897
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||||||||| ||||||||||||||||||||| || | |||||| |||| ||||  |||||||||| | ||| || || ||||||||||||| ||||||    
T  12411042 aacaagaatgcgtctgatcttgtgatgtttcttataaatcttcttctgagtagcagtgtgtttctttttatcaacagcagcaccttcttcatctaaaacc 12410943  T
Q  261 agatc---aacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |||||   |||||| |||||||| ||||| |||| |||||||||||    
T  12410942 agatcattaacaccttcttcaaggatatcccataattcttcatcta 12410897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 14312612 - 14312479
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgttt--ctttctgtcagcaacaacaccttcttcatccaaaacca---gatcaa 267  Q
    ||||||||||||||||| || ||||| |||||||| |||| || ||||| |  ||||||||||  |||| ||||||||||||||||| |||    |||||    
T  14312612 cctctgatcttgtgatgctttttgtaaagcttcttctgagcagaagtgtgtatctttctgtcaataacagcaccttcttcatccaaatccaaatcatcaa 14312513  T
Q  268 caccatcttcaagaatatctcatagttcttcatc 301  Q
    | ||||| |||||||| || ||||||||||||||    
T  14312512 ctccatcctcaagaatgtcccatagttcttcatc 14312479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 301
Target Start/End: Complemental strand, 11207305 - 11207162
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttctt--tctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||| ||| ||||||||||||||||| || |||||   |||||| |||| || ||||| | ||  ||||||   |||||| ||||||||||||||| ||    
T  11207305 aacaataatccctctgatcttgtgatgctttttgtaagtcttcttctgagcaggagtgtgtattcttctgtctataacaactccttcttcatccaaatcc 11207206  T
Q  261 agatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    |||||| ||   ||||||||||||||||| ||||||||||||||    
T  11207205 agatcatcaactccatcttcaagaatatcccatagttcttcatc 11207162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 15960672 - 15960527
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcag--tgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||||  || ||  || |||||||| |||  |||| | ||||||||||| |   ||    
T  15960672 aacaaggattcctctgatcttgtgatgtttcttgtaaagcttcttatgaccaggagaatgcttctttctatcaataacagctccttcttcatcaagggcc 15960573  T
Q  261 a---gatcaacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |    | |||||||||||||||||||||| |||||||| |||||||    
T  15960572 aagtcaccaacaccatcttcaagaatatcccatagttcatcatcta 15960527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 20493083 - 20493131
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  20493083 agggtcacaattcaaacccccttccttgtgactattttatctacttcat 20493131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 15652309 - 15652174
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtt--tctttctgtcagcaacaacaccttcttcatccaaaaccagatca---a 267  Q
    ||||||||||||| ||| || ||||| | ||| || |||| || |||||   |||||||||||  | || | ||||||||||||||||||| ||||   |    
T  15652309 cctctgatcttgtcatgctttttgtatatctttttctgagcaggagtgtgaatctttctgtcaatagcagctccttcttcatccaaaaccaaatcatcaa 15652210  T
Q  268 caccatcttcaagaatatctcatagttcttcatcta 303  Q
    ||||||||||||||||||| || |||||||||||||    
T  15652209 caccatcttcaagaatatcccacagttcttcatcta 15652174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 13262873 - 13262740
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtt--tctttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| || ||||| |||| || |||||   || ||||||||  |||||| | ||||| ||||||| ||| |||| ||     
T  13262873 cctctgatcttgtgatgctttttgtaaagtttcttctgagcaggagtgtggatccttctgtcaataacaactctttctttatccaaatccaaatcatcaa 13262774  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      ||||||||||||||||| ||||||||||||||    
T  13262773 ctccatcttcaagaatatcccatagttcttcatc 13262740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 20294097 - 20294141
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttact 128  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  20294097 agggtcacaattcaaacccccttccttgtgactattttatctact 20294141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 8984458 - 8984512
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcatcttc 136  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||    
T  8984458 agggtcacaattcaaacccccccttccttgtgactattttatctacttcatcttc 8984512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 16881065 - 16881123
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgt 221  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||| |||| || |||||    
T  16881065 aacaagaattcctatgatcttgtgatgtttcttgtaaagcttcttctgagcagtagtgt 16881123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 4781450 - 4781401
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  4781450 agggtcacaattcaaaccccccttccttgtgactattttatctacttcat 4781401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16127542 - 16127591
Alignment:
Q  84 agggtcacaattcaaac-cctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  16127542 agggtcacaattcaaactcctcattccttgtgactattttatttacttca 16127591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 17016813 - 17016947
Alignment:
Q  174 ctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacca---gatcaac 268  Q
    |||||||||||||||| || ||||| |||||||| |||| || |  |||| |||||||||||  | || | |||||||||||||||||||    ||||||    
T  17016813 ctctgatcttgtgatgctttttgtatagcttcttctgagcaggagtgtgtatctttctgtcaatagcagctccttcttcatccaaaaccaaatcatcaac 17016912  T
Q  269 accatcttcaagaatatctcatagttcttcatcta 303  Q
     | ||||||||||||||| || || || |||||||    
T  17016913 tcaatcttcaagaatatcccacagctcctcatcta 17016947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 2487877 - 2487829
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  2487877 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 2487829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 8997151 - 8997018
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacca---gatcaa 267  Q
    ||||||||||||||||| || |||||||| ||||| |||| || |  |||| || ||||||||  |||| | | ||||||||||||| |||    |||||    
T  8997151 cctctgatcttgtgatgctttttgtagagtttcttctgagcaggagtgtgtatccttctgtcaataacagctcattcttcatccaaatccaaatcatcaa 8997052  T
Q  268 caccatcttcaagaatatctcatagttcttcatc 301  Q
    | ||||||||||||||||| ||||| || |||||    
T  8997051 ctccatcttcaagaatatcccatagctcctcatc 8997018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 13118448 - 13118400
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  13118448 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 13118400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 24814894 - 24814942
Alignment:
Q  84 agggtcacaattcaaaccctctt-ccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  24814894 agggtcacaattcaaaccccctttccttatgactattttatttacttca 24814942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 24872225 - 24872177
Alignment:
Q  84 agggtcacaattcaaac-cctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||    
T  24872225 agggtcacaattcaaactccccttccttgtgactattttatctacttca 24872177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 49386381 - 49386333
Alignment:
Q  84 agggtcacaattcaaaccctctt-ccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  49386381 agggtcacaattcaaaccccctttccttgtgactattttatctacttca 49386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 1684259 - 1684209
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  1684259 agggtcacaattcaaacccccccttccttgtgactattttatctacttcat 1684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 1785205 - 1785144
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||| ||| |||||||| ||   ||||||||||||||||| ||||||||||||||    
T  1785205 ccttcttcatctaaatccagatcatcaactccatcttcaagaatatcccatagttcttcatc 1785144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 9381792 - 9381731
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||||| |||||||| ||   ||||||||||| ||||| ||||||||||||||    
T  9381792 ccttcttcatccaaatccagatcatcaactccatcttcaagtatatcccatagttcttcatc 9381731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 14078639 - 14078561
Alignment:
Q  177 tgatcttgtgatgtttcttgtagagcttcttatgagaagcag--tgtttctttctgtcagcaacaacaccttcttcatc 253  Q
    ||||||||||||| |||||||| |||||||| |||||||  |  ||||||||||| |||  |||||| |||||||||||    
T  14078639 tgatcttgtgatgcttcttgtaaagcttcttctgagaaggggtatgtttctttctatcaataacaactccttcttcatc 14078561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 16334424 - 16334374
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  16334424 agggtcacaattcaaacccccccttccttgtgactattttatctacttcat 16334374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 18696232 - 18696197
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgta 198  Q
    ||||||||| ||||||||||||||||||||||||||    
T  18696232 aacaagaattcctctgatcttgtgatgtttcttgta 18696197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 682817 - 682768
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  682817 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 682768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 4023128 - 4023079
Alignment:
Q  84 agggtcacaattcaaaccc--tcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||||||  |||| |||||||||||||||| |||||||    
T  4023128 agggtcacaattcaaaccccctctttcttgtgactattttatctacttca 4023079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 4372600 - 4372649
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  4372600 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 4372649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 4382341 - 4382390
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  4382341 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 4382390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Original strand, 4432889 - 4432927
Alignment:
Q  263 atcaacaccatcttcaagaatatctcatagttcttcatc 301  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  4432889 atcaactccatcttcaagaatatcccatagttcttcatc 4432927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 6423364 - 6423413
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  6423364 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 6423413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 6433791 - 6433840
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  6433791 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 6433840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 8973903 - 8973952
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  8973903 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 8973952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 9538192 - 9538241
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  9538192 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 9538241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 9548518 - 9548567
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  9548518 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 9548567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 12794449 - 12794400
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  12794449 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 12794400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 20743710 - 20743661
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  20743710 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 20743661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 29934763 - 29934628
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttct--ttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    |||||||| |||||||| || ||||| |||||||| |||| || ||||| | |  ||||||||  | || | |||||||||||||||| || |||| ||     
T  29934763 cctctgatattgtgatgctttttgtatagcttcttctgagcaggagtgtgtatatttctgtcaatagcagctccttcttcatccaaaatcaaatcatcaa 29934664  T
Q  270 --ccatcttcaagaatatctcatagttcttcatcta 303  Q
      ||||||||||||||||| || || ||||||||||    
T  29934663 ctccatcttcaagaatatcccacagctcttcatcta 29934628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 29983917 - 29983782
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttct--ttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    |||||||| |||||||| || ||||| |||||||| |||| || ||||| | |  ||||||||  | || | |||||||||||||||| || |||| ||     
T  29983917 cctctgatattgtgatgctttttgtatagcttcttctgagcaggagtgtgtatatttctgtcaatagcagctccttcttcatccaaaatcaaatcatcaa 29983818  T
Q  270 --ccatcttcaagaatatctcatagttcttcatcta 303  Q
      ||||||||||||||||| || || ||||||||||    
T  29983817 ctccatcttcaagaatatcccacagctcttcatcta 29983782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 38816953 - 38816904
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  38816953 agggtcacaattcaaacccccaattccttgtgactattttatctacttca 38816904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 7795747 - 7795688
Alignment:
Q  245 ttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||| |||||||| ||   ||||||||||| ||||| ||||||||||||||    
T  7795747 ttcttcatccaaatccagatcatcaactccatcttcaagtatatcccatagttcttcatc 7795688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 8741268 - 8741209
Alignment:
Q  245 ttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||| |||||||| ||   ||||||||||||||||| ||||| ||||||||    
T  8741268 ttcttcatccaaatccagatcatcaactccatcttcaagaatatcccatagctcttcatc 8741209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 16306338 - 16306246
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatc 253  Q
    ||||||||||||||||||| |||||||| || | || | |||||| || | ||||  ||||||||| || ||| ||||||| |||||||||||    
T  16306338 aacaagaatgcctctgatcctgtgatgtctcgtatacatcttcttctgcgcagcagtgtgtttcttcctatcaacaacaactccttcttcatc 16306246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 10992 - 10944
Alignment:
Q  84 agggtcacaattcaaaccc-tcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | |||||| |||||||||||| |||||||    
T  10992 agggtcacaattcaaacccctattccttatgactattttatctacttca 10944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 1063172 - 1063305
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttct--ttctgtcagcaacaacaccttcttcatccaaaaccag---atcaa 267  Q
    ||||||||||||||||| || ||||| || ||||| |||| || ||||| | |  ||||||||  | || | ||||||||||||||| ||||   |||||    
T  1063172 cctctgatcttgtgatgctttttgtaaagtttcttctgagcaggagtgtgtatccttctgtcaatagcagctccttcttcatccaaatccagatcatcaa 1063271  T
Q  268 caccatcttcaagaatatctcatagttcttcatc 301  Q
    | |||||||||||||| || ||||| || |||||    
T  1063272 ctccatcttcaagaatgtcccatagctcctcatc 1063305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 13930780 - 13930848
Alignment:
Q  129 tcatcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgt 197  Q
    ||||||||||||| | ||||  || ||||| |  ||||| |||||||||||||||||||||| ||||||    
T  13930780 tcatcttcaagtactttttgtgaggtagagaagcaacaaaaatgcctctgatcttgtgatgtgtcttgt 13930848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 14801431 - 14801383
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | || |||||||||||||||| |||||||    
T  14801431 agggtcacaattcaaacccccctttcttgtgactattttatctacttca 14801383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 130 - 307
Target Start/End: Complemental strand, 17527694 - 17527513
Alignment:
Q  130 catcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgt--ttcttt 227  Q
    |||||||||||||||||||  || || || |  |||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||  ||||||    
T  17527694 catcttcaagtattctttgtgaggtaaagcagcaacaagaatgcctctgatcttgtgatatttcttgtaaagctt-ttatgagcagcagtgtgtttcttt 17527596  T
Q  228 ctgtcagcaacaacaccttcttcatccaaaaccagatca---acaccatcttcaagaatatctcatagttcttcatctatgcc 307  Q
    |||| |||| |  ||| ||||||||||||||||||||||   |||||||||||||||||||| ||| ||||||||||||||||    
T  17527595 ctgtaagcagctgcacattcttcatccaaaaccagatcatcaacaccatcttcaagaatatcccattgttcttcatctatgcc 17527513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 13694974 - 13695087
Alignment:
Q  129 tcatcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctt 226  Q
    ||||||||||||| ||||||  || || || |  |||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||  |||||||||    
T  13694974 tcatcttcaagtactctttgtgaggtaaagcagcaacaagaatgtctctgatcttgtgatgtttcttgtagagtttcttctgagcagcaatgtgtttctt 13695073  T
Q  227 tctgtcagcaacaa 240  Q
     || ||| ||||||    
T  13695074 cctatcaacaacaa 13695087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 3475090 - 3475042
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  3475090 agggtcacaattcaaacccccttccttgtgactattttatctacttcat 3475042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 301
Target Start/End: Original strand, 3389489 - 3389632
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||| ||| ||||||||||||||||| || || || |||||||| |||| |  |  |||| |||||||||||  | || | ||||||||||||||| ||    
T  3389489 aacaataatccctctgatcttgtgatgctttttataaagcttcttctgagcaagagtgtgtatctttctgtcaatagcagctccttcttcatccaaatcc 3389588  T
Q  261 a---gatcaacaccatcttcaagaatatctcatagttcttcatc 301  Q
    |    |||||| |||||||||||| |||||||||||||||||||    
T  3389589 aaatcatcaactccatcttcaagattatctcatagttcttcatc 3389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 10422843 - 10422892
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  10422843 agggtcacaattcaaaccccccttccttgtgactattttatttacttcat 10422892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 14837240 - 14837179
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||||| |||||||| ||   ||||||||||||||||| ||||||||||||||    
T  14837240 ccttcttcatccaaatccagatcatcaactccatcttcaagaatatcccatagttcttcatc 14837179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 521196 - 521148
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  521196 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 521148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 2831046 - 2831094
Alignment:
Q  84 agggtcacaattcaaaccctctt-ccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  2831046 agggtcacaattcaaaccccctttccttgtgactattttatctacttca 2831094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 14903697 - 14903552
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||||||||| | ||||||||||||||||| |||| | |||| | | || ||||  |||||||||||| ||| || || | ||||||||||| || |||    
T  14903697 aacaagaatgcttatgatcttgtgatgtttcatgtacaacttcgtttaagtagcagtgtgtttctttctatcaacatcagctccttcttcatctaacacc 14903598  T
Q  261 a---gatcaacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |    | |||||| ||||| ||||| ||| ||||||||||||||||    
T  14903597 aagtcaccaacacaatcttgaagaacatcccatagttcttcatcta 14903552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 17144791 - 17144839
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  17144791 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 17144839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 30652727 - 30652775
Alignment:
Q  84 agggtcacaattcaaa-ccctcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  30652727 agggtcacaattcaaatcccccttccttgtgactattttatctacttca 30652775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 3495774 - 3495724
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  3495774 agggtcacaattcaaacccccccttccttgtgactattttatctacttcat 3495724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 6693275 - 6693325
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  6693275 agggtcacaattcaaacccccccttccttgtgactattttatctacttcat 6693325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 16316450 - 16316511
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||||| |||||||| ||   ||||||||||| ||||| ||||||||||||||    
T  16316450 ccttcttcatccaaatccagatcatcaactccatcttcaagtatatcccatagttcttcatc 16316511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 27679577 - 27679527
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  27679577 agggtcacaattcaaacccccccttccttgtgactattttatctacttcat 27679527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 40922900 - 40922950
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  40922900 agggtcacaattcaaacccccccttccttgtgactattttatctacttcat 40922950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 518690 - 518641
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  518690 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 518641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 3486451 - 3486402
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  3486451 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 3486402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5291912 - 5291863
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  5291912 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 5291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5301571 - 5301522
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  5301571 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 5301522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 6703681 - 6703730
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  6703681 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 6703730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 7842861 - 7842812
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  7842861 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 7842812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 7845741 - 7845695
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttactt 129  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||    
T  7845741 agggtcacaattcaaacccccattccttgtgactattttatctactt 7845695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 16081284 - 16081235
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16081284 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16081235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16250506 - 16250555
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16250506 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16250555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16630593 - 16630642
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16630593 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 17420304 - 17420255
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  17420304 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 17420255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 17827000 - 17826951
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  17827000 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 17826951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 17836391 - 17836342
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  17836391 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 17836342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21847346 - 21847395
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21847346 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21847395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21856938 - 21856987
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21856938 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21856987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21903209 - 21903258
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21903209 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21903258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21912801 - 21912850
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21912801 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21912850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 27689232 - 27689183
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  27689232 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 27689183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 11470320 - 11470453
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttct--ttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| || ||||| |||| || ||||| | |  ||||||||  | || | |||||||||||| || |||||||| ||     
T  11470320 cctctgatcttgtgatgctttttgtaaagtttcttctgagcaggagtgtgtatccttctgtcaatagcagctccttcttcatccgaatccagatcatcaa 11470419  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      ||||| |||||||| || ||||||||||||||    
T  11470420 ctccatcatcaagaatgtcccatagttcttcatc 11470453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 4578 - 4452
Alignment:
Q  129 tcatcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctt 226  Q
    ||||||||||||| ||||||  || ||||| |  ||||||||||||||||| |||||||||||||||||| | |||||| |||| ||||  |||||||||    
T  4578 tcatcttcaagtactctttgtgaggtagagcagcaacaagaatgcctctgaacttgtgatgtttcttgtacatcttcttctgagcagcaatgtgtttctt 4479  T
Q  227 tctgtcagcaacaacaccttcttcatc 253  Q
     || ||| | |||||||||||||||||    
T  4478 cctatcaacgacaacaccttcttcatc 4452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 190289 - 190145
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||||||||||| ||||||||| ||||||||| |||||||| || |||  ||||  ||||||||| || ||| ||||||||||||||||||| |  |||    
T  190289 aacaagaatgcctatgatcttgttatgtttcttatagagcttattctgattagcaatgtgtttcttcctatcaacaacaacaccttcttcatctaggacc 190190  T
Q  261 agatcaacacca--tcttcaagaatatctcatagttcttcatcta 303  Q
    | |||| || ||  |||||||| |||||||||| |||||||||||    
T  190189 aaatcaccaacacctcttcaaggatatctcataattcttcatcta 190145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 303
Target Start/End: Original strand, 22958906 - 22959050
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||||||||||| ||||||||| ||||||||| |||||||| || |||  ||||  ||||||||| || ||| ||||||||||||||||||| |  |||    
T  22958906 aacaagaatgcctatgatcttgtaatgtttcttatagagcttattctgattagcaatgtgtttcttcctatcaacaacaacaccttcttcatctaggacc 22959005  T
Q  261 agatcaacacca--tcttcaagaatatctcatagttcttcatcta 303  Q
    | |||| || ||  |||||||| |||||||||| |||||||||||    
T  22959006 aaatcaccaacacctcttcaaggatatctcataattcttcatcta 22959050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 9345592 - 9345651
Alignment:
Q  162 taacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgt 221  Q
    ||||||||||||||||||||||||||||||||||||| | || ||| |||| ||||||||    
T  9345592 taacaagaatgcctctgatcttgtgatgtttcttgtacaactacttctgagtagcagtgt 9345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 27857606 - 27857697
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagc--agtgtttctttctgtcagcaacaacaccttcttcatc 253  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| |||| |||   |||||||||||| | | ||||| | |||||||||||    
T  27857606 aacaagaatgcctctgatcttgtgatgtttc-tgtacagcttcttctgagcagcggtgtgtttctttctatgaacaacatctccttcttcatc 27857697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 2369423 - 2369375
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  2369423 agggtcacaattcaaacccccttctttgtgactattttatctacttcat 2369375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 49336820 - 49336868
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  49336820 agggtcacaattcaaacccccctccttgtgactattttatctacttcat 49336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 2117914 - 2117963
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  2117914 agggtcacaattcaaaccctcccttccttgtgactattttatctacttca 2117963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 303
Target Start/End: Original strand, 18613836 - 18613874
Alignment:
Q  265 caacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  18613836 caacaccatcttcaagaatatcccatagttcttcatcta 18613874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 21904329 - 21904280
Alignment:
Q  84 agggtcacaattcaaaccc--tcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  21904329 agggtcacaattcaaaccccctcttccttgtgactattttatctacttca 21904280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 26192257 - 26192208
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  26192257 agggtcacaattcaaaccccccttccttgtgactattttatctacttcat 26192208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 18095921 - 18095873
Alignment:
Q  84 agggtcacaattcaaaccct-cttccttgtgactattttatttacttca 131  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  18095921 agggtcacaattcaaaccctccttccttgtgaatattttatctacttca 18095873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 20315491 - 20315546
Alignment:
Q  84 agggtcacaattcaaa--ccctcttccttgtgactattttatttacttcatcttca 137  Q
    ||||||||||||||||  ||| |||||||||||||||||||| |||||||| ||||    
T  20315491 agggtcacaattcaaagccccccttccttgtgactattttatctacttcatattca 20315546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 21820452 - 21820404
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||    
T  21820452 agggtcacaattcaaacccccctttcttgtgactattttatttacttca 21820404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 22401557 - 22401605
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  22401557 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 22401605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 22961963 - 22962011
Alignment:
Q  84 agggtcacaattcaaaccctct-tccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  22961963 agggtcacaattcaaaccccccctccttgtgactattttatttacttca 22962011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 42035276 - 42035324
Alignment:
Q  84 agggtcacaattcaaa-ccctcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  42035276 agggtcacaattcaaatccctcttccttatgactattttatctacttca 42035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 52948699 - 52948651
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  52948699 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 52948651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 30548626 - 30548576
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  30548626 agggtcacaattcaaaccccccattccttgtgactattttatctacttcat 30548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 1973685 - 1973636
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  1973685 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 1973636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 1988472 - 1988423
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  1988472 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 1988423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 13966110 - 13966159
Alignment:
Q  84 agggtcacaattcaaaccc--tcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||||||  |||| |||||||||||||||| |||||||    
T  13966110 agggtcacaattcaaaccccctctttcttgtgactattttatctacttca 13966159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16155940 - 16155989
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16155940 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16155989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 20874467 - 20874332
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgt--ttctttctgtcagcaacaacaccttcttcatccaaaacca---gatcaa 267  Q
    ||||||||||| ||||| || ||||| ||||| || |||| || |||||   |||||||||||  | || | ||||||||||||||  |||    |||||    
T  20874467 cctctgatcttatgatgctttttgtatagcttattctgagcaggagtgtgaatctttctgtcaatagcagctccttcttcatccaagtccaaatcatcaa 20874368  T
Q  268 caccatcttcaagaatatctcatagttcttcatcta 303  Q
    | |||||||||||||||||||| || ||||||||||    
T  20874367 ctccatcttcaagaatatctcacagctcttcatcta 20874332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21459685 - 21459734
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21459685 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21459734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 25020525 - 25020574
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  25020525 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 25020574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 25868406 - 25868455
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  25868406 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 25868455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 27067140 - 27067189
Alignment:
Q  84 agggtcacaattcaaacc--ctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||  | |||||||||||||||||||| |||||||    
T  27067140 agggtcacaattcaaacctccccttccttgtgactattttatctacttca 27067189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 37013411 - 37013460
Alignment:
Q  84 agggtcacaattcaaaccctct--tccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  37013411 agggtcacaattcaaactctctattccttgtgactattttatctacttca 37013460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 41200891 - 41200940
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  41200891 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 41200940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 41542830 - 41542784
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttactt 129  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||    
T  41542830 agggtcacaattcaaaccccccttccttgtgactattttatctactt 41542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 25822335 - 25822286
Alignment:
Q  84 agggtcacaattcaaaccct-cttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  25822335 agggtcacaattcaagcccaacttccttgtgactattttatctacttcat 25822286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 8541259 - 8541307
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    |||||||||||||||| || | ||||||||||||||||||| |||||||    
T  8541259 agggtcacaattcaaatccccattccttgtgactattttatctacttca 8541307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 8606498 - 8606546
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    |||||||||||||||| || | ||||||||||||||||||| |||||||    
T  8606498 agggtcacaattcaaatccccattccttgtgactattttatctacttca 8606546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 12420468 - 12420508
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttat 123  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  12420468 agggtcacaattcaaaccccccttccttgtgactattttat 12420508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 25038395 - 25038355
Alignment:
Q  84 agggtcacaattcaaac-cctcttccttgtgactattttat 123  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  25038395 agggtcacaattcaaactccccttccttgtgactattttat 25038355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 25043607 - 25043567
Alignment:
Q  84 agggtcacaattcaaac-cctcttccttgtgactattttat 123  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  25043607 agggtcacaattcaaactccccttccttgtgactattttat 25043567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 16463848 - 16463940
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatc 253  Q
    |||||||||||||||||||||||| |||||||| || |||||||| |||| ||||  ||||||||| || ||| |||||||||||||||||||    
T  16463848 aacaagaatgcctctgatcttgtggtgtttcttttaaagcttcttctgagcagcagtgtgtttcttcctatcaacaacaacaccttcttcatc 16463940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 16309032 - 16308974
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgt 221  Q
    |||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||    
T  16309032 aacaagaatgcctctgatcttgtgatgtttcttgtacaacttcttctgagcagcagtgt 16308974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 12771148 - 12771195
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  12771148 agggtcacaattcaaacccccttccttgtgactatattatttacttca 12771195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 18440214 - 18440347
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttct--ttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| |||||||| |||| || ||||| | |  ||||||||  | |  | ||||||||||||||| |||||||| ||     
T  18440214 cctctgatcttgtgatgctttttgtaaagcttcttctgagcaggagtgtgtatccttctgtcaatagctgctccttcttcatccaaatccagatcatcaa 18440313  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      |||||||||||||| || ||||||||||||||    
T  18440314 ctccatcttcaagaatgtcccatagttcttcatc 18440347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 42622152 - 42622200
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttcat 132  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  42622152 agggtcacaattcaaacccctttccttgtgactattttatctacttcat 42622200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5380817 - 5380769
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  5380817 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 5380769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5614453 - 5614405
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  5614453 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 5614405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 7018409 - 7018361
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  7018409 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 7018361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 7033767 - 7033719
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  7033767 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 7033719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 9534240 - 9534192
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  9534240 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 9534192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 9544523 - 9544475
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  9544523 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 9544475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 10610739 - 10610787
Alignment:
Q  84 agggtcacaattcaaa-ccctcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  10610739 agggtcacaattcaaatcccccttctttgtgactattttatttacttca 10610787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 12088392 - 12088440
Alignment:
Q  84 agggtcacaattcaaac-cctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||    
T  12088392 agggtcacaattcaaactccccttccttgtgactattttatctacttca 12088440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 16106358 - 16106213
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||||||||||| | |||||||||||||||||||| | ||| || |||| ||||  |||||||||||  |||  || |   | ||||||||| || |||    
T  16106358 aacaagaatgcctattatcttgtgatgtttcttgtaaatcttgttctgagcagcagtgtgtttctttcaatcaataatagatctttcttcatctaacacc 16106259  T
Q  261 agat---caacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    | ||   |||||||||||||||| | ||| ||||||||||||||||    
T  16106258 aaatcaccaacaccatcttcaaggacatcacatagttcttcatcta 16106213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 31825779 - 31825827
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  31825779 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 31825827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 9169272 - 9169333
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||||| |||||||| ||   ||||||||||| ||||| ||||||||||||||    
T  9169272 ccttcttcatccaaatccagatcatcaactccatcttcaagtatatcccatagttcttcatc 9169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 13130897 - 13130947
Alignment:
Q  84 agggtcacaattcaaa--ccctcttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||  ||| |||||||||||||||||||| ||||||||    
T  13130897 agggtcacaattcaaatccccccttccttgtgactattttatctacttcat 13130947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 32109877 - 32109927
Alignment:
Q  87 gtcacaattcaaaccctc--ttccttgtgactattttatttacttcatctt 135  Q
    |||||||||||||||| |  ||||||||||||||||||| |||||||||||    
T  32109877 gtcacaattcaaacccccccttccttgtgactattttatctacttcatctt 32109927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 46508783 - 46508833
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  46508783 agggtcacaattcaaacccccccttccttgtgactattttatctacttcat 46508833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5390455 - 5390406
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  5390455 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 5390406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 6535541 - 6535590
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  6535541 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 6535590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 6545862 - 6545911
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  6545862 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 6545911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 8502106 - 8502155
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  8502106 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 8502155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 8512576 - 8512625
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  8512576 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 8512625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 11625369 - 11625320
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  11625369 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 11625320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 13284707 - 13284658
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  13284707 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 13284658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 16130919 - 16130870
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16130919 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16130870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 16141468 - 16141419
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16141468 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16141419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 24539466 - 24539417
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  24539466 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 24539417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 27990154 - 27990203
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  27990154 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 27990203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 43984720 - 43984769
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  43984720 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 43984769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 45554617 - 45554666
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  45554617 agggtcacaattcaaaccccccattccttgtgactattttatctacttca 45554666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 46498171 - 46498220
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  46498171 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 46498220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 15987662 - 15987617
Alignment:
Q  87 gtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||    
T  15987662 gtcacaattcaaaccccccttccttgtgactattttatctacttca 15987617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 8341266 - 8341313
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||| ||| || ||||||||||||||||| ||||||||    
T  8341266 agggtcacaattcaacccccct-ccttgtgactattttatctacttcat 8341313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 19586807 - 19586847
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttat 123  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  19586807 agggtcacaattcaaaccccccttccttgtgactattttat 19586847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 19801160 - 19801208
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | |||||||||||| |||||| |||||||    
T  19801160 agggtcacaattcaaaccccccttccttgtgactgttttatctacttca 19801208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 26304612 - 26304662
Alignment:
Q  84 agggtcacaattcaaaccctc---ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||||||    
T  26304612 agggtcacaattcaaaccccccccttccttgtgactattttatctacttca 26304662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 26308172 - 26308222
Alignment:
Q  84 agggtcacaattcaaaccctc---ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||||||    
T  26308172 agggtcacaattcaaaccccccccttccttgtgactattttatctacttca 26308222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 26362206 - 26362156
Alignment:
Q  84 agggtcacaattcaaaccctc---ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||||||    
T  26362206 agggtcacaattcaaaccccccccttccttgtgactattttatctacttca 26362156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 44898355 - 44898405
Alignment:
Q  84 agggtcacaattcaaaccctc---ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||||||    
T  44898355 agggtcacaattcaaaccccccccttccttgtgactattttatctacttca 44898405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 44908780 - 44908830
Alignment:
Q  84 agggtcacaattcaaaccctc---ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||||||    
T  44908780 agggtcacaattcaaaccccccccttccttgtgactattttatctacttca 44908830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 303
Target Start/End: Original strand, 20966833 - 20966978
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||||||| ||||| |||||||||||||||||||| || ||||| |||| ||||  ||||||| |||| ||| ||||||| | ||||||||| || |||    
T  20966833 aacaagaattcctctaatcttgtgatgtttcttgtacagattcttctgagcagcaatgtgtttcgttctatcaacaacaactcattcttcatctaatacc 20966932  T
Q  261 a---gatcaacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |    | |||||||||||||||| | ||| ||||||||||||||||    
T  20966933 aagtcaccaacaccatcttcaagcacatcccatagttcttcatcta 20966978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 21704902 - 21705035
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgttt--ctttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| |||||||| |||| || ||||| |  |||||||||   | || | ||||||||||||||| |||||||| ||     
T  21704902 cctctgatcttgtgatgctttttgtaaagcttcttctgagcaggagtgtgtatctttctgtccatagcagctccttcttcatccaaatccagatcatcaa 21705001  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      ||||||||||||||||| ||||||||||||||    
T  21705002 ctccatcttcaagaatatcccatagttcttcatc 21705035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 36317508 - 36317555
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  36317508 agggtcacaattcaaacccccttccttgtgactattttatctacttca 36317555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 20553148 - 20553009
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttcttt--ctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||||||| ||||||||||||||||| || || || |||||||| |||| || ||||| | |||  ||||||  | || | ||||||||||||||| ||    
T  20553148 aacaagaatccctctgatcttgtgatgctttttataaagcttcttctgagcaggagtgtgtatttttctgtcaatagcagctccttcttcatccaaatcc 20553049  T
Q  261 agatcaaca---ccatcttcaagaatatctcatagttctt 297  Q
    | |||| ||   ||||||||||||||||| ||||||||||    
T  20553048 aaatcatcaactccatcttcaagaatatcccatagttctt 20553009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 204664 - 204616
Alignment:
Q  84 agggtcacaattcaaaccc-tcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  204664 agggtcacaattcaaacccctcttccttgtgactattttatctacttca 204616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 23393660 - 23393599
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||||| |||||||| ||   ||||||||||||||||| ||||||||||||||    
T  23393660 ccttcttcatccaaatccagatcatcaactccatcttcaagaatatcccatagttcttcatc 23393599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 31917872 - 31917921
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  31917872 agggtcacaattcaaaccccccttccttgtgactattttatctacttcat 31917921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 4037175 - 4037127
Alignment:
Q  84 agggtcacaattcaaacc-ctcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||    
T  4037175 agggtcacaattcaaacctcccttccttgtgactattttatctacttca 4037127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 19547448 - 19547408
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttat 123  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  19547448 agggtcacaattcaaaccctcattccttgtgactattttat 19547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 19886884 - 19886836
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  19886884 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 19886836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 33950777 - 33950828
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcatc 133  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||||    
T  33950777 agggtcacaattcaaacccccccttccttgtgactattttatctacttcatc 33950828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 24982420 - 24982481
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||||| |||||||| ||   ||||||||||| ||||| ||||||||||||||    
T  24982420 ccttcttcatccaaatccagatcatcaactccatcttcaagtatatcccatagttcttcatc 24982481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 11410113 - 11410064
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  11410113 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 11410064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 13570875 - 13570826
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  13570875 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 13570826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 18208458 - 18208409
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  18208458 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 18208409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 18217796 - 18217747
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  18217796 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 18217747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 20948913 - 20948962
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  20948913 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 20948962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 20959282 - 20959331
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  20959282 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 20959331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21683246 - 21683295
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21683246 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21683295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21754595 - 21754644
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21754595 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21754644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21763882 - 21763931
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21763882 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21763931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 26191027 - 26190978
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  26191027 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 26190978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 26201609 - 26201560
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  26201609 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 26201560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 27413205 - 27413254
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  27413205 agggtcacaattcaaaccccccattccttgtgactattttatctacttca 27413254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 30942486 - 30942437
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  30942486 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 30942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 30951908 - 30951859
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  30951908 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 30951859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 32071496 - 32071545
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  32071496 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 32071545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 33940377 - 33940426
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  33940377 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 33940426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 37646528 - 37646479
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  37646528 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 37646479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 37818659 - 37818709
Alignment:
Q  84 agggtcacaattcaaaccctc---ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |   ||||||||||||||||||| |||||||    
T  37818659 agggtcacaattcaaaccccccccttccttgtgactattttatctacttca 37818709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 21917012 - 21916867
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    |||||||||| || |||||||||||||||||||||| || ||||| | || ||||  |||||||||||| ||| || |||| ||||||||||  || |||    
T  21917012 aacaagaatgtctttgatcttgtgatgtttcttgtacagtttcttctaagcagcaatgtgtttctttctatcaacatcaactccttcttcatgtaacacc 21916913  T
Q  261 a---gatcaacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |    | |||||||||||||||||| ||| ||||||||||||||||    
T  21916912 aagtcaccaacaccatcttcaagaacatcccatagttcttcatcta 21916867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 21919340 - 21919195
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    |||||||||| || |||||||||||||||||||||| || ||||| | || ||||  |||||||||||| ||| || |||| ||||||||||  || |||    
T  21919340 aacaagaatgtctttgatcttgtgatgtttcttgtacagattcttctaagcagcaatgtgtttctttctatcaacatcaactccttcttcatgtaacacc 21919241  T
Q  261 a---gatcaacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |    | ||||||||||||||| || ||| ||||||||||||||||    
T  21919240 aagtcaccaacaccatcttcaaaaacatcccatagttcttcatcta 21919195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 26878668 - 26878801
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgttt--ctttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| |||||||| |||| || ||||| |  ||||||||||  | || | ||||||||||||||| ||| |||| ||     
T  26878668 cctctgatcttgtgatgctttttgtaaagcttcttctgagcaggagtgtgtatctttctgtcaatagcagctccttcttcatccaaatccaaatcatcaa 26878767  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      ||||||||||||||||| ||||||||||||||    
T  26878768 ctccatcttcaagaatatcccatagttcttcatc 26878801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 301
Target Start/End: Complemental strand, 28722548 - 28722405
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttcttt--ctgtcagcaacaacaccttcttcatccaaaacc 260  Q
    ||||||||| ||||||||||||||||| || || || |||||||| |||| || ||||| | |||  ||||||  | || | ||||||||||||||| ||    
T  28722548 aacaagaattcctctgatcttgtgatgctttttataaagcttcttctgagcaggagtgtgtatttttctgtcaatagcagctccttcttcatccaaatcc 28722449  T
Q  261 agatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    | |||| ||   ||||||||||||||||| ||||||||||||||    
T  28722448 aaatcatcaactccatcttcaagaatatcccatagttcttcatc 28722405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 19343377 - 19343424
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  19343377 agggtcacaattcaaacccccttccttgtgactattttatctacttca 19343424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 29424414 - 29424461
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  29424414 agggtcacaattcaaacccccttccttgtgactattttatctacttca 29424461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 12580378 - 12580422
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttact 128  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  12580378 agggtcacaattcaaacccccttccttgtgactattttatctact 12580422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 303
Target Start/End: Original strand, 22773364 - 22773499
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaacca---gatcaa 267  Q
    ||||||||||||||||| || ||||| |||||||| |||| |  |  |||| |||||||||||  | || | ||||||||||| |||||||    |||||    
T  22773364 cctctgatcttgtgatgctttttgtatagcttcttctgagcatgagtgtgtatctttctgtcaatagcagctccttcttcatcaaaaaccaaatcatcaa 22773463  T
Q  268 caccatcttcaagaatatctcatagttcttcatcta 303  Q
    | ||||||||||||||||| || || ||||||||||    
T  22773464 ctccatcttcaagaatatcccacagctcttcatcta 22773499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 38956769 - 38956720
Alignment:
Q  84 agggtcacaattcaaacc--ctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||||||    
T  38956769 agggtcacaattcaaaccttctcttccttgtgactattttatctacttca 38956720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 4469063 - 4469112
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  4469063 agggtcacaattcaaaccccccttccttgtgactattttatctacttcat 4469112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 10899779 - 10899730
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgag 212  Q
    |||||| || |||||||| ||||||||||||||||| |||||||||||||    
T  10899779 aacaaggattcctctgatattgtgatgtttcttgtaaagcttcttatgag 10899730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 24416174 - 24416111
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatcta 303  Q
    ||||||||||||||| |||||||| ||   ||||||||||||||||| |||||||| |||||||    
T  24416174 ccttcttcatccaaatccagatcatcaactccatcttcaagaatatcccatagttcatcatcta 24416111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 574739 - 574787
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  574739 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 574787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 3604564 - 3604507
Alignment:
Q  84 agggtcacaattcaaaccctct----tccttgtgactattttatttacttcatcttca 137  Q
    ||||||||||||||||||| ||    |||||||||||||||||| |||||||||||||    
T  3604564 agggtcacaattcaaaccccctcccttccttgtgactattttatctacttcatcttca 3604507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 24695504 - 24695456
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  24695504 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 24695456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 25119633 - 25119601
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttctt 195  Q
    |||||||||||||||||||||||||||||||||    
T  25119633 aacaagaatgcctctgatcttgtgatgtttctt 25119601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 27158922 - 27158874
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  27158922 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 27158874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 32877770 - 32877818
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32877770 agggtcacaattcaaacccccattccttgtgactattttatctacttca 32877818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 37862034 - 37861986
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  37862034 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 37861986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 22257020 - 22257102
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcag--tgtttctttctgtcagcaacaacaccttcttcatc 253  Q
    ||||||||  ||||||||||||||||||| |||||||||| || ||  |||||| || | ||| ||||||| |||||||||||    
T  22257020 cctctgattgtgtgatgtttcttgtagagtttcttatgagtaggagtatgtttccttttatcaacaacaactccttcttcatc 22257102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 2997619 - 2997570
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  2997619 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 2997570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 4459438 - 4459487
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  4459438 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 4459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5335781 - 5335732
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  5335781 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 5335732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5345633 - 5345584
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  5345633 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 5345584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 16901139 - 16901090
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16901139 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16901090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 16994530 - 16994481
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16994530 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16994481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 18652275 - 18652324
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  18652275 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 18652324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 18664393 - 18664442
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  18664393 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 18664442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 22671530 - 22671481
Alignment:
Q  84 agggtcacaattcaaa--ccctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||  ||| |||||||||||||||||||| |||||||    
T  22671530 agggtcacaattcaaagccccccttccttgtgactattttatctacttca 22671481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 22678669 - 22678620
Alignment:
Q  84 agggtcacaattcaaa--ccctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||  ||| |||||||||||||||||||| |||||||    
T  22678669 agggtcacaattcaaagccccccttccttgtgactattttatctacttca 22678620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 27169270 - 27169221
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  27169270 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 27169221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 29115276 - 29115227
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  29115276 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 29115227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 32935706 - 32935657
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  32935706 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 32935657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 45191896 - 45191946
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttcatc 133  Q
    ||||||||||||||||||| | |||||||||||||||||||  ||||||||    
T  45191896 agggtcacaattcaaaccccccttccttgtgactattttatcgacttcatc 45191946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 6875903 - 6875855
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttcat 132  Q
    |||||||||||||||| || ||||||||| |||||| ||| ||||||||    
T  6875903 agggtcacaattcaaatccccttccttgtaactattatatctacttcat 6875855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 22907793 - 22907745
Alignment:
Q  84 agggtcacaattcaaaccctct-tccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  |||||||||||||||||| |||||||    
T  22907793 agggtcacaattcaaaccccccctccttgtgactattttatctacttca 22907745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 9008 - 8875
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgttt--ctttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| |||||||| |||| || ||||| |  |||||||||   | || | ||||||||||||||| |||||||| ||     
T  9008 cctctgatcttgtgatgctttttgtaaagcttcttctgagcaggagtgtgtatctttctgtccatagcagctccttcttcatccaaatccagatcatcaa 8909  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      ||||||||||||||||| ||||||||||||||    
T  8908 ctccatcttcaagaatatcccatagttcttcatc 8875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 30664 - 30615
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  30664 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 30615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 22148840 - 22148705
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtt--tctttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| |||||||| |||| || |||||   ||||| ||||| || || | ||||||||||||||||||| |||| ||     
T  22148840 cctctgatcttgtgatgctttttgtatagcttcttctgagcaggagtgtgaatctttttgtcaacagcagctccttcttcatccaaaaccaaatcatcaa 22148741  T
Q  270 --ccatcttcaagaatatctcatagttcttcatcta 303  Q
      ||||||||||||||||| || || ||||||||||    
T  22148740 ctccatcttcaagaatatcccacagctcttcatcta 22148705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 24667263 - 24667344
Alignment:
Q  174 ctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatc 253  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||  ||||||||| || ||| |||||||| ||||||||||    
T  24667263 ctctgatcttgtgatgtttcttgtaaagcttcttctgagtagcagtgtgtttcttcctatcaacaacaacatcttcttcatc 24667344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 24633022 - 24633086
Alignment:
Q  240 acaccttcttcatccaaaaccagatcaacaccatcttcaagaatatctcatagttcttcatctat 304  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||| |||| ||||||||||||    
T  24633022 acaccttcttcatccaaagtaagaccaacaccatcttcaagaatatcacataattcttcatctat 24633086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 11429466 - 11429421
Alignment:
Q  86 ggtcacaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||    
T  11429466 ggtcacaattcaaacccccttccttgtgactattttatctacttca 11429421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 3842567 - 3842700
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttct--ttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| |||||||| |||| || ||||| | |  ||||||||  | || | ||||||||||||||| |||||||| ||     
T  3842567 cctctgatcttgtgatgctttttgtaaagcttcttctgagcaggagtgtgtatccttctgtcaatagcagctccttcttcatccaaatccagatcatcaa 3842666  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      |||||||||||||| || ||||| ||||||||    
T  3842667 ctccatcttcaagaatgtcccatagctcttcatc 3842700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 16746111 - 16746172
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||||| |||||||| ||   ||||||||||||||||| ||||||||||||||    
T  16746111 ccttcttcatccaaatccagatcatcaactccatcttcaagaatatcccatagttcttcatc 16746172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 303
Target Start/End: Complemental strand, 22462685 - 22462647
Alignment:
Q  265 caacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22462685 caacaccatcttcaagaatatcccatagttcttcatcta 22462647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 23014054 - 23014006
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23014054 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 23014006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 31998242 - 31998194
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  31998242 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 31998194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 24679643 - 24679608
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgta 198  Q
    ||||||||| ||||||||||||||||||||||||||    
T  24679643 aacaagaattcctctgatcttgtgatgtttcttgta 24679608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 3988572 - 3988621
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  3988572 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 3988621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 8669004 - 8669053
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  8669004 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 8669053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 9324039 - 9323990
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  9324039 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 9323990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 12900309 - 12900260
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  12900309 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 12900260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 13675820 - 13675869
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  13675820 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 13675869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 14438487 - 14438533
Alignment:
Q  86 ggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  14438487 ggtcacaattcaaaccccccttccttgtgactattttatatacttca 14438533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16583013 - 16583062
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16583013 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16583062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 21201838 - 21201789
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21201838 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21201789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 21212254 - 21212205
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21212254 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21212205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21335355 - 21335404
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21335355 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21335404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21462165 - 21462214
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21462165 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21462214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 21986750 - 21986701
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21986750 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21986701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 21996284 - 21996235
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  21996284 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 21996235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 147767 - 147806
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttat 123  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  147767 agggtcacaattcaaaccctcttccttgtgactattttat 147806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 233000 - 232949
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttcatc 133  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||||    
T  233000 agggtcacaattcaaacccccccttccttgtgactattttatctacttcatc 232949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 18092762 - 18092679
Alignment:
Q  129 tcatcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgag 212  Q
    ||||||||||||||||  ||  || ||||| |  ||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  18092762 tcatcttcaagtattccatgtgaggtagagcagcaacaagatttcctctgatcttgtgatgtttcttgtagagcttcttctgag 18092679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 25725712 - 25725577
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtt--tctttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| |||||||| |||| || |||||   ||||||| |||  | || | ||||||||||||||||||| |||| ||     
T  25725712 cctctgatcttgtgatgctttttgtatagcttcttctgagcaggagtgtgaatctttctatcaatagcagctccttcttcatccaaaaccaaatcatcaa 25725613  T
Q  270 --ccatcttcaagaatatctcatagttcttcatcta 303  Q
      ||||||||||||||||| || || ||||||||||    
T  25725612 ctccatcttcaagaatatcccacagctcttcatcta 25725577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16322382 - 16322430
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  16322382 agggtcacaattcaaaccccccttccttgtgactattttatttacttca 16322430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16334530 - 16334578
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  16334530 agggtcacaattcaaaccccccttccttgtgactattttatttacttca 16334578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 29541512 - 29541553
Alignment:
Q  90 acaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  29541512 acaattcaaacccccttccttgtgactattttatttaattca 29541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 7753725 - 7753677
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  7753725 agggtcacaattcaaacccccattccttgtgactattttatctacttca 7753677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 18705326 - 18705278
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18705326 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 18705278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 18711261 - 18711213
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18711261 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 18711213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 30656881 - 30656833
Alignment:
Q  84 agggtcacaattcaaac-cctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||    
T  30656881 agggtcacaattcaaactccccttccttgtgactattttatctacttca 30656833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 14792659 - 14792709
Alignment:
Q  84 agggtcacaattcaaac--cctcttccttgtgactattttatttacttcat 132  Q
    |||||||||||||||||  || |||||||||||||||||||| ||||||||    
T  14792659 agggtcacaattcaaactcccccttccttgtgactattttatctacttcat 14792709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 17446974 - 17446931
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttct 206  Q
    ||||||||| | |||||||||||||||||||||||| |||||||    
T  17446974 aacaagaattcatctgatcttgtgatgtttcttgtaaagcttct 17446931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 3286903 - 3286952
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  3286903 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 3286952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 12988861 - 12988812
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  12988861 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 12988812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16899003 - 16899052
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16899003 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16899052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16909656 - 16909705
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  16909656 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 16909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 18202607 - 18202656
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  18202607 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 18202656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 20913339 - 20913388
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  20913339 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 20913388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 24502580 - 24502531
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  24502580 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 24502531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 26019410 - 26019361
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  26019410 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 26019361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 26439886 - 26439935
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  26439886 agggtcacaattcaaacccccccttccttgtgactattttatatacttca 26439935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 31358618 - 31358667
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  31358618 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 31358667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 31368348 - 31368397
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  31368348 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 31368397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 34766414 - 34766463
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  34766414 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 34766463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 286
Target Start/End: Complemental strand, 17609804 - 17609686
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagca--gtgtttctttctgtcagcaacaacaccttcttcatccaaaaccagat---caa 267  Q
    ||||||||||||||||| || ||||| |||||||| |||| || |  |||| |||||||||||  | || | ||||| ||||||||  ||||||   |||    
T  17609804 cctctgatcttgtgatgctttttgtatagcttcttttgagcaggagtgtgtatctttctgtcaatagcagctccttcctcatccaagtccagatcagcaa 17609705  T
Q  268 caccatcttcaagaatatc 286  Q
    | |||||||||||||||||    
T  17609704 ctccatcttcaagaatatc 17609686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 19874686 - 19874735
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgag 212  Q
    ||||||||| ||| ||||||||| |||||||||||| |||||||| ||||    
T  19874686 aacaagaattcctttgatcttgttatgtttcttgtaaagcttcttctgag 19874735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 26512507 - 26512558
Alignment:
Q  84 agggtcacaattcaaaccctct---tccttgtgactattttatttacttcat 132  Q
    ||||||||||||||| ||| ||   |||||||||||||||||||||||||||    
T  26512507 agggtcacaattcaacccccctccctccttgtgactattttatttacttcat 26512558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 26517623 - 26517674
Alignment:
Q  84 agggtcacaattcaaaccctct---tccttgtgactattttatttacttcat 132  Q
    ||||||||||||||| ||| ||   |||||||||||||||||||||||||||    
T  26517623 agggtcacaattcaacccccctccctccttgtgactattttatttacttcat 26517674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 790007 - 789963
Alignment:
Q  88 tcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||    
T  790007 tcacaattcaaaccccccttccttgtgactattttatctacttca 789963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 19364130 - 19364178
Alignment:
Q  84 agggtcacaattcaaac-cctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||    
T  19364130 agggtcacaattcaaactccccttccttatgactattttatctacttca 19364178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 24930036 - 24929989
Alignment:
Q  86 ggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  24930036 ggtcacaattcaaacccccccttccttgtgactattttatctacttca 24929989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 30636889 - 30636925
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattt 120  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  30636889 agggtcacaattcaaaccccctttcttgtgactattt 30636925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 6003 - 5957
Alignment:
Q  85 gggtcacaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  6003 gggtcacaattcaaccccccttccttgtgactattttatttacttca 5957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 4311 - 4444
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttct--ttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||| || ||||| |||||||| |||| || ||||| | |  ||||||||  | || | ||||||||||||||| |||||||| ||     
T  4311 cctctgatcttgtgatgctttttgtaaagcttcttctgagcaggagtgtgtatccttctgtcaatagcagctccttcttcatccaaatccagatcatcaa 4410  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      |||||||||||||| || ||||| ||||||||    
T  4411 ctccatcttcaagaatgtcccatagctcttcatc 4444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 34074 - 34013
Alignment:
Q  243 ccttcttcatccaaaaccagatcaaca---ccatcttcaagaatatctcatagttcttcatc 301  Q
    ||||||||||||||| |||||||| ||   ||||||||||||||||| ||||||||||||||    
T  34074 ccttcttcatccaaatccagatcatcaactccatcttcaagaatatcccatagttcttcatc 34013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 73734 - 73686
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  73734 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 73686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 8481 - 8528
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||    
T  8481 agggtcacaattcaaatccccttccttgtgactattttatctacttca 8528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0873 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0873
Description:

Target: scaffold0873; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 4805 - 4756
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  4805 agggtcacaattcaaaccccccttccttgtgactattttatctacttcat 4756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 12357 - 12405
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||    
T  12357 agggtcacaattcaaacccccctttcttgtgactattttatttacttca 12405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 19833 - 19881
Alignment:
Q  84 agggtcacaattcaaaccctcttcc-ttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  19833 agggtcacaattcaaacccccctcccttgtgactattttatttacttca 19881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 58026 - 57893
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgtttct--ttctgtcagcaacaacaccttcttcatccaaaaccagatcaaca- 269  Q
    ||||||||||||||||  || ||||| |||||||| |||| || ||||| | |  ||||||||  | || | ||||||||||||||| |||||||| ||     
T  58026 cctctgatcttgtgatactttttgtaaagcttcttctgagtaggagtgtgtatccttctgtcaatagcagctccttcttcatccaaatccagatcatcaa 57927  T
Q  270 --ccatcttcaagaatatctcatagttcttcatc 301  Q
      |||||||||||||| || ||||| ||||||||    
T  57926 ctccatcttcaagaatgtcccatagctcttcatc 57893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 28021 - 27973
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  28021 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 27973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 49226 - 49178
Alignment:
Q  84 agggtcacaattcaaac-cctcttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||  || |||||||||||||||||||| |||||||    
T  49226 agggtcacaattcaaatgccccttccttgtgactattttatctacttca 49178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 309031 - 308983
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  309031 agggtcacaattcaaaccccccttccttgtgactattttatctacttca 308983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 394867 - 394819
Alignment:
Q  84 agggtcacaattcaaacc-ctcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||    
T  394867 agggtcacaattcaaacctcccttccttgtgactattttatctacttca 394819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 3036 - 2910
Alignment:
Q  129 tcatcttcaagtattctttgaaagatagagtaataacaagaatgcctctgatcttgtgatgtttcttgtagagcttcttatgagaagcagtgt--ttctt 226  Q
    ||||||||||||| ||||||  || || || |  ||||||||||||| ||||| ||| | |||||||||| |  ||||| |||| || |||||  |||||    
T  3036 tcatcttcaagtactctttgtgaggtaaagaagcaacaagaatgcctttgatcatgttacgtttcttgtacattttcttctgagcagtagtgtgtttctt 2937  T
Q  227 tctgtcagcaacaacaccttcttcatc 253  Q
    ||| ||| ||||||| |||||||||||    
T  2936 tctatcaacaacaactccttcttcatc 2910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 91886 - 91837
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  91886 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 91837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 61080 - 61127
Alignment:
Q  84 agggtcacaattcaaaccctcttccttgtgactattttatttacttca 131  Q
    ||||| ||||||||| ||| | ||||||||||||||||||||||||||    
T  61080 agggttacaattcaaccccccctccttgtgactattttatttacttca 61127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 22 - 71
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  22 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 2376 - 2327
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  2376 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 3170 - 3204
Alignment:
Q  163 aacaagaatgcctctgatcttgtgatgtttcttgt 197  Q
    ||||||||||||||| |||||||||||||||||||    
T  3170 aacaagaatgcctctaatcttgtgatgtttcttgt 3204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 274 - 323
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  274 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 14941 - 14892
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  14941 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 6826 - 6875
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  6826 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 6875  T

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Target: scaffold0313; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 10608 - 10657
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  10608 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 10657  T

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Target: scaffold0308 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 20029 - 20078
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  20029 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 20078  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 9197 - 9246
Alignment:
Q  84 agggtcacaattcaaaccctc--ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  9197 agggtcacaattcaaacccccccttccttgtgactattttatctacttca 9246  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 303
Target Start/End: Complemental strand, 22119 - 22081
Alignment:
Q  265 caacaccatcttcaagaatatctcatagttcttcatcta 303  Q
    |||||||||||||||| || |||||||||||||||||||    
T  22119 caacaccatcttcaagtatgtctcatagttcttcatcta 22081  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 11573 - 11438
Alignment:
Q  173 cctctgatcttgtgatgtttcttgtagagcttcttatgagaagcag--tgtttctttctgtcagcaacaacaccttcttcatccaaaaccag---atcaa 267  Q
    ||||||||||||||||| || ||||| |||||||| |||| || ||  ||| |||||||||||  | || | ||||||||||||||   |||   |||||    
T  11573 cctctgatcttgtgatgctttttgtatagcttcttctgagcaggagtatgtatctttctgtcaatagcagctccttcttcatccaagttcagatcatcaa 11474  T
Q  268 caccatcttcaagaatatctcatagttcttcatcta 303  Q
    | ||||||||| ||||||| ||||| || |||||||    
T  11473 ctccatcttcaggaatatcccatagctcctcatcta 11438  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 267085 - 267039
Alignment:
Q  86 ggtcacaattcaaaccctcttccttgtgactattttatttacttcat 132  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||||    
T  267085 ggtcacaattcaaacccccctctttgtgactattttatctacttcat 267039  T

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Target: scaffold0360 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 1329 - 1377
Alignment:
Q  84 agggtcacaattcaaa-ccctcttccttgtgactattttatttacttca 131  Q
    |||||||||||||||| ||| |||||||||||||||| ||| |||||||    
T  1329 agggtcacaattcaaatcccccttccttgtgactattatatctacttca 1377  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 13945 - 13897
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | ||||||||||| ||||||| |||||||    
T  13945 agggtcacaattcaaacccccattccttgtgaccattttatctacttca 13897  T

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Target: scaffold0059 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 39575 - 39535
Alignment:
Q  84 agggtcacaattcaaaccc-tcttccttgtgactattttat 123  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  39575 agggtcacaattcaaacccctcttcgttgtgactattttat 39535  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 110776 - 110728
Alignment:
Q  84 agggtcacaattcaaaccctc-ttccttgtgactattttatttacttca 131  Q
    ||||||||||||||||||| | |||||||||||||| |||| |||||||    
T  110776 agggtcacaattcaaaccccccttccttgtgactatcttatctacttca 110728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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