View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2323_low_3 (Length: 587)

Name: NF2323_low_3
Description: NF2323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2323_low_3
NF2323_low_3
[»] chr7 (42 HSPs)
chr7 (1-569)||(32823917-32824474)
chr7 (1-277)||(42910157-42910438)
chr7 (1-277)||(31876122-31876403)
chr7 (1-277)||(36921032-36921315)
chr7 (1-277)||(43429489-43429775)
chr7 (1-277)||(22366771-22367047)
chr7 (1-279)||(5932945-5933226)
chr7 (1-266)||(10069884-10070147)
chr7 (36-263)||(13852667-13852899)
chr7 (16-254)||(27054226-27054475)
chr7 (16-241)||(24360807-24361040)
chr7 (104-277)||(8768206-8768379)
chr7 (107-277)||(47070041-47070211)
chr7 (112-277)||(11205918-11206083)
chr7 (53-275)||(36509024-36509237)
chr7 (107-277)||(3211682-3211852)
chr7 (107-277)||(10672192-10672362)
chr7 (108-277)||(12117974-12118143)
chr7 (1-213)||(31982211-31982423)
chr7 (114-276)||(47903663-47903826)
chr7 (36-266)||(18672706-18672942)
chr7 (107-277)||(47204007-47204167)
chr7 (107-264)||(40849334-40849491)
chr7 (178-277)||(45898031-45898130)
chr7 (107-277)||(29628689-29628859)
chr7 (107-277)||(524305-524475)
chr7 (154-277)||(1335884-1336007)
chr7 (1-125)||(48675433-48675562)
chr7 (109-277)||(31287214-31287382)
chr7 (104-276)||(31011203-31011375)
chr7 (113-277)||(11399603-11399766)
chr7 (188-276)||(30079034-30079122)
chr7 (108-277)||(10337969-10338140)
chr7 (104-208)||(27100114-27100218)
chr7 (104-208)||(27178085-27178189)
chr7 (136-278)||(29211065-29211206)
chr7 (107-152)||(22299006-22299051)
chr7 (179-279)||(8567985-8568085)
chr7 (194-262)||(8860531-8860599)
chr7 (155-191)||(10070840-10070876)
chr7 (107-147)||(30079158-30079198)
chr7 (107-147)||(37376240-37376280)
[»] chr8 (27 HSPs)
chr8 (4-276)||(14549552-14549829)
chr8 (36-278)||(3682279-3682521)
chr8 (1-277)||(18169508-18169788)
chr8 (1-277)||(18633074-18633354)
chr8 (60-274)||(44673109-44673328)
chr8 (1-211)||(36827334-36827554)
chr8 (1-264)||(30392400-30392673)
chr8 (22-277)||(6200412-6200677)
chr8 (1-209)||(36909892-36910094)
chr8 (107-277)||(3006113-3006278)
chr8 (1-275)||(10661469-10661742)
chr8 (1-208)||(33068913-33069125)
chr8 (104-208)||(5802501-5802605)
chr8 (107-277)||(12659707-12659877)
chr8 (88-201)||(42496452-42496565)
chr8 (107-277)||(11219441-11219611)
chr8 (106-277)||(31477650-31477821)
chr8 (182-275)||(12192909-12193002)
chr8 (182-275)||(12437337-12437430)
chr8 (188-276)||(40436984-40437072)
chr8 (136-275)||(11017442-11017581)
chr8 (136-266)||(4785724-4785854)
chr8 (236-277)||(5802442-5802483)
chr8 (223-272)||(23344723-23344772)
chr8 (232-277)||(33069139-33069184)
chr8 (237-277)||(8036170-8036210)
chr8 (206-278)||(41346474-41346546)
[»] chr2 (24 HSPs)
chr2 (1-280)||(25297729-25298018)
chr2 (1-277)||(11376207-11376488)
chr2 (1-278)||(18360121-18360408)
chr2 (1-277)||(19936601-19936882)
chr2 (1-277)||(44979246-44979537)
chr2 (1-280)||(34910630-34910919)
chr2 (14-264)||(17916353-17916607)
chr2 (107-277)||(9811753-9811923)
chr2 (107-277)||(16579003-16579173)
chr2 (107-277)||(20420791-20420961)
chr2 (107-277)||(36412837-36413007)
chr2 (1-185)||(44035630-44035824)
chr2 (107-266)||(42785027-42785176)
chr2 (107-277)||(41166630-41166800)
chr2 (113-253)||(27300963-27301103)
chr2 (112-279)||(12041036-12041203)
chr2 (107-275)||(44085965-44086132)
chr2 (107-277)||(5862108-5862272)
chr2 (107-266)||(12884849-12885009)
chr2 (104-266)||(1331459-1331621)
chr2 (1-42)||(20420520-20420561)
chr2 (104-277)||(11695930-11696105)
chr2 (104-164)||(11678452-11678512)
chr2 (109-153)||(18153327-18153371)
[»] chr5 (46 HSPs)
chr5 (15-266)||(12165430-12165691)
chr5 (4-277)||(32520701-32520979)
chr5 (1-277)||(12680551-12680837)
chr5 (1-276)||(2226360-2226645)
chr5 (1-277)||(10174383-10174661)
chr5 (36-277)||(36176365-36176611)
chr5 (46-254)||(36176619-36176832)
chr5 (16-277)||(9161318-9161588)
chr5 (1-278)||(332766-333045)
chr5 (1-277)||(38434006-38434292)
chr5 (1-202)||(36103162-36103373)
chr5 (107-277)||(701580-701750)
chr5 (107-277)||(666808-666978)
chr5 (107-277)||(8409349-8409519)
chr5 (107-277)||(11917818-11917988)
chr5 (107-277)||(38334291-38334461)
chr5 (1-263)||(30265288-30265554)
chr5 (16-277)||(17084362-17084622)
chr5 (107-277)||(30002361-30002531)
chr5 (107-277)||(15068839-15069009)
chr5 (107-225)||(27885675-27885793)
chr5 (111-277)||(42545822-42545988)
chr5 (141-277)||(23781175-23781311)
chr5 (141-277)||(23868128-23868264)
chr5 (112-276)||(35359464-35359623)
chr5 (141-277)||(35893485-35893622)
chr5 (35-94)||(35893346-35893405)
chr5 (110-277)||(36568185-36568352)
chr5 (109-276)||(41455351-41455518)
chr5 (154-277)||(42119338-42119461)
chr5 (107-266)||(23623478-23623637)
chr5 (104-277)||(2423276-2423449)
chr5 (207-264)||(14653020-14653077)
chr5 (45-102)||(42545025-42545082)
chr5 (169-275)||(9988414-9988520)
chr5 (108-233)||(28224345-28224470)
chr5 (107-225)||(691099-691217)
chr5 (113-273)||(33793108-33793268)
chr5 (232-275)||(11403172-11403215)
chr5 (1-71)||(23781049-23781124)
chr5 (1-71)||(23868002-23868077)
chr5 (107-225)||(18432565-18432683)
chr5 (179-277)||(40330922-40331020)
chr5 (104-157)||(6595400-6595453)
chr5 (67-125)||(9988538-9988593)
chr5 (201-277)||(39730813-39730889)
[»] chr6 (26 HSPs)
chr6 (1-277)||(35039414-35039700)
chr6 (1-277)||(13801458-13801739)
chr6 (36-263)||(25137505-25137736)
chr6 (1-177)||(33550644-33550830)
chr6 (1-272)||(10591159-10591430)
chr6 (107-277)||(12270919-12271089)
chr6 (107-277)||(5866558-5866728)
chr6 (1-185)||(15860049-15860242)
chr6 (107-254)||(10390539-10390686)
chr6 (107-277)||(10493867-10494037)
chr6 (215-277)||(33550849-33550911)
chr6 (113-277)||(7169528-7169692)
chr6 (112-266)||(22414281-22414435)
chr6 (108-220)||(11417516-11417628)
chr6 (112-254)||(12108050-12108192)
chr6 (104-225)||(13531766-13531887)
chr6 (108-204)||(9686520-9686616)
chr6 (136-251)||(4577586-4577700)
chr6 (1-74)||(10390709-10390788)
chr6 (109-212)||(17306833-17306936)
chr6 (183-277)||(13092487-13092581)
chr6 (215-277)||(15860252-15860313)
chr6 (104-157)||(19134666-19134719)
chr6 (188-277)||(23764766-23764855)
chr6 (179-275)||(24641033-24641130)
chr6 (216-264)||(8478713-8478760)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-277)||(69011-69297)
scaffold0059 (5-277)||(77117-77399)
[»] chr3 (29 HSPs)
chr3 (1-277)||(6003869-6004155)
chr3 (1-262)||(35531653-35531919)
chr3 (1-277)||(21586328-21586608)
chr3 (63-276)||(48032618-48032836)
chr3 (1-185)||(32880627-32880816)
chr3 (107-277)||(10369624-10369794)
chr3 (107-277)||(51149208-51149378)
chr3 (108-277)||(4669133-4669302)
chr3 (107-277)||(35401710-35401880)
chr3 (1-277)||(50562077-50562343)
chr3 (107-277)||(33361326-33361496)
chr3 (96-277)||(27641698-27641879)
chr3 (1-278)||(39098259-39098516)
chr3 (3-125)||(33002840-33002967)
chr3 (107-277)||(34794937-34795097)
chr3 (113-277)||(17144180-17144344)
chr3 (107-278)||(51661808-51661979)
chr3 (107-277)||(55467074-55467244)
chr3 (107-153)||(43030849-43030895)
chr3 (1-77)||(43030747-43030828)
chr3 (108-277)||(48169144-48169313)
chr3 (107-253)||(46252906-46253052)
chr3 (179-266)||(2831843-2831930)
chr3 (107-230)||(42362703-42362826)
chr3 (207-278)||(50578434-50578505)
chr3 (107-225)||(2565790-2565908)
chr3 (104-276)||(52632599-52632765)
chr3 (104-276)||(26758697-26758868)
chr3 (208-276)||(45629752-45629820)
[»] chr1 (38 HSPs)
chr1 (1-277)||(33910252-33910538)
chr1 (1-277)||(45692117-45692398)
chr1 (1-266)||(39256122-39256397)
chr1 (1-277)||(51251906-51252182)
chr1 (1-277)||(24910535-24910815)
chr1 (1-275)||(16528970-16529253)
chr1 (1-185)||(32954400-32954589)
chr1 (35-277)||(33474801-33475038)
chr1 (45-234)||(6722341-6722529)
chr1 (1-259)||(44918862-44919116)
chr1 (16-266)||(11899375-11899631)
chr1 (107-277)||(5154883-5155043)
chr1 (107-277)||(8211653-8211813)
chr1 (107-277)||(20494108-20494268)
chr1 (107-277)||(29707628-29707787)
chr1 (107-266)||(1160530-1160678)
chr1 (82-277)||(29390096-29390276)
chr1 (107-253)||(17652203-17652349)
chr1 (179-277)||(11072808-11072906)
chr1 (107-248)||(27506978-27507119)
chr1 (107-277)||(12974045-12974215)
chr1 (104-224)||(25559512-25559632)
chr1 (164-247)||(13243208-13243291)
chr1 (112-211)||(26344561-26344660)
chr1 (173-279)||(39157745-39157850)
chr1 (1-77)||(1160698-1160779)
chr1 (104-165)||(6248541-6248602)
chr1 (130-251)||(9961712-9961833)
chr1 (1-68)||(29389353-29389425)
chr1 (114-264)||(24630424-24630573)
chr1 (108-254)||(35375640-35375781)
chr1 (113-250)||(3937231-3937368)
chr1 (107-262)||(35992050-35992205)
chr1 (107-209)||(36202953-36203055)
chr1 (188-277)||(8164977-8165066)
chr1 (104-229)||(16063279-16063404)
chr1 (189-277)||(4967715-4967803)
chr1 (149-185)||(42789091-42789127)
[»] scaffold0013 (2 HSPs)
scaffold0013 (1-277)||(106356-106642)
scaffold0013 (1-125)||(128963-129092)
[»] chr4 (45 HSPs)
chr4 (1-277)||(30193456-30193742)
chr4 (1-277)||(48996400-48996686)
chr4 (1-277)||(10219004-10219280)
chr4 (1-275)||(32137013-32137300)
chr4 (1-277)||(8176088-8176364)
chr4 (1-277)||(31301720-31301996)
chr4 (1-214)||(40899623-40899846)
chr4 (107-277)||(50570498-50570668)
chr4 (107-277)||(29640008-29640178)
chr4 (107-277)||(42558096-42558266)
chr4 (107-277)||(5261331-5261501)
chr4 (82-276)||(26477671-26477869)
chr4 (107-266)||(36078697-36078856)
chr4 (35-179)||(52345067-52345216)
chr4 (1-262)||(6333637-6333904)
chr4 (107-277)||(29643247-29643417)
chr4 (49-185)||(52345225-52345356)
chr4 (36-185)||(40806393-40806542)
chr4 (107-277)||(1564494-1564664)
chr4 (16-125)||(23937155-23937269)
chr4 (50-125)||(43630908-43630983)
chr4 (107-276)||(20986875-20987044)
chr4 (112-279)||(54273368-54273536)
chr4 (111-275)||(46471895-46472059)
chr4 (198-277)||(51395347-51395426)
chr4 (108-254)||(48338815-48338960)
chr4 (107-254)||(41325871-41326018)
chr4 (107-229)||(8485154-8485276)
chr4 (136-246)||(15986049-15986159)
chr4 (109-263)||(23449436-23449590)
chr4 (179-277)||(5121828-5121926)
chr4 (172-277)||(18399554-18399659)
chr4 (107-278)||(3999230-3999402)
chr4 (104-266)||(23119754-23119916)
chr4 (107-249)||(27743810-27743952)
chr4 (107-225)||(36105959-36106077)
chr4 (107-277)||(18536096-18536266)
chr4 (107-253)||(48653365-48653511)
chr4 (206-277)||(18881489-18881560)
chr4 (111-277)||(10777822-10777979)
chr4 (107-225)||(48292919-48293037)
chr4 (107-192)||(21069534-21069618)
chr4 (1-42)||(29639776-29639817)
chr4 (209-266)||(40806305-40806362)
chr4 (194-254)||(17845425-17845485)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-262)||(47261-47532)
scaffold0029 (1-262)||(40065-40336)
[»] scaffold0308 (1 HSPs)
scaffold0308 (107-277)||(5393-5563)
[»] scaffold0204 (2 HSPs)
scaffold0204 (104-277)||(14992-15164)
scaffold0204 (108-254)||(26337-26482)
[»] scaffold0048 (1 HSPs)
scaffold0048 (182-278)||(68924-69020)


Alignment Details
Target: chr7 (Bit Score: 390; Significance: 0; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 1 - 569
Target Start/End: Original strand, 32823917 - 32824474
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaaa-----gagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32823917 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaggagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 32824016  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    |||||||||||||||||||||||||     ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  32824017 attattcatgcggtttggtttggtt-----gctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagccatccgaattcatccaaa 32824111  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaaca-ccctagcttcgtcaacatcc 294  Q
     ||||||||||||||| | |||||| |||| ||||||||  |||| ||||||||||||| ||||||||||| ||||||| |||| ||||| |||||||||    
T  32824112 ccaagtgcggttttttacggtttcgatttggattgatttgatttgtggtttttctattgggttggttcggttttaaacacccctggcttcatcaacatcc 32824211  T
Q  295 acatgacacaaaggagtgaagcacacgttcttgccaacacaaaagccccatcctcgccacgtaaccacatgtcaatacttgttatgttcaattgacctga 394  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32824212 acatgacacgaaggagtaaagcatacgttcttgccaacacaaaagccccatcctcgccacgtaaccacatgtcaatacttgttatgttcgattgacctga 32824311  T
Q  395 gcaggagtagaaatcaaattagctcccaaagactatgtcgagaactgcatattccaaggtgtagctgtgcgaggtaggttatggtgaatatcatttgtgg 494  Q
    || |||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32824312 gctggagtagaaat------------caaagactatgtcgagaactgcatattccaaggtgtagctgtgcgaggtaggttatggtgaatatcatttgtgg 32824399  T
Q  495 cattgctcgcaagcgtccaatcctccaagaattgatgagctctgacaaccacttgagcgacgaccatcttgtgac 569  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32824400 cattgttcgcaagcgtccaatcctccaagaattgatgagctctgacaaccacttgagcgacgaccatcttgtgac 32824474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 42910438 - 42910157
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||||||||  | ||||||||||||||||||||||||| ||     |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42910438 aattagaatcggacctgatggtgcaacaatggaaaaatcaaatcaaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 42910339  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  42910338 attattcttgcggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtgcaaaagtcatccgaattcatccgaa 42910239  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     |||||||||||||||||||||||| |||| |||| ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  42910238 ccaagtgcggttttttgcagtttcgatttggattggtttggtttgcggtttttctattgggttggttcggttttgaacaccc 42910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 31876403 - 31876122
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| |||||||||||||||||||||||||||||||     |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31876403 aattagaatcgaatctgatggtgcaacaatggaaaaatcgaattaaaagagattattcttgagctatgtaactgggctagtacatgtttaagtaatattc 31876304  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||  ||||||||||||||||| ||||||||| |||||||||||||||| || |||||||  ||||||| |||||||||||||||||||||||||||    
T  31876303 attatttttgcggtttggtttggtttggttgctgagatgcaaaccgcaaaccaaatcgaaccgcacggttcattgcaaaagtcatccgaattcatccgaa 31876204  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| || ||||||| |||| |||||  |||| ||| |||||| |||||||||||| ||||||||||| || |||||||    
T  31876203 tcaagtgtgggtttttgcggttttggtttcgattggtttggtttgcagtttttctattgggttggttcggttttgaacaccc 31876122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 36921315 - 36921032
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggc--tagtacatgtttaagtaatat 93  Q
    |||||||||| || ||||||||||||||||| ||||||||||     || ||||||||||||||||||||||||||   |||||||||||||||||||||    
T  36921315 aattagaatcgaacctgatggtgcaacaatgaaaaaatcgaatcaaaagcgattattcttgagctatgtaattgggggttagtacatgtttaagtaatat 36921216  T
Q  94 tcattattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccg 193  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| | |||||| ||||||||| |||||||||||||||    
T  36921215 tcattattcttgcggtttggtttggttcggttgctgagatgcaaactgcaaaccaaaccgaaccgcgtggttcaatgcaaaagtaatccgaattcatccg 36921116  T
Q  194 aatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    || |||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  36921115 aaccaagtgcggttttttgtagtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacaccc 36921032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 43429489 - 43429775
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||  || ||||||||||||||||||||||||||||     ||||||| |||||||||||||||||||| | |||||| |||||||||||| ||    
T  43429489 aattagaattgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagatttttcttgagctatgtaattggacgagtacacgtttaagtaatagtc 43429588  T
Q  96 attattcatgcggtt-----tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||     |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  43429589 attattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccatgcggtttagtgcaaaagtcatccgaattcat 43429688  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  43429689 ccgaaccaagtgcggttttttgcggtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacaccc 43429775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 22366771 - 22367047
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22366771 aattagaatcgaacctgatggtgcaacaatggaaaaaccgaattgaaagagattattcttgagctatgtaattgggctagtacatgtttgagtaatattc 22366870  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| |||||||||||||||||     ||| | ||||||||||||||||||||| || ||  ||||| ||||||||||||||||||||||||| |||    
T  22366871 attattcttgcggtttggtttggtt-----gctaagatgcaaaccgcaaaccgaaccaaatcgcacggtttagtgcaaaagtcatccgaattcatctgaa 22366965  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||||||||||||||||| |||||| |||| |||| |||  |||||||||||| ||||| ||||||||||| || |||||||    
T  22366966 ccaagtgcggttttttgcggtttcgatttggattggtttgatttgcggtttttttattgggttggttcggttttgaacaccc 22367047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 5932945 - 5933226
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagt-aatattcatta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||    
T  5932945 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtcattattc-tta 5933043  T
Q  100 ttcatgcggtttggtttggttcggttgctgaaatgcaaaccgca-----aaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccga 194  Q
       ||  |||||||||||||||||||||||| || |||||||||     ||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  5933044 -cgatttggtttggtttggttcggttgctgagatacaaaccgcaaaccgaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaatttatccga 5933142  T
Q  195 atcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacccta 279  Q
    | |||||||||||||||||  |||| ||||| |||| ||| ||||||  ||||| ||||| ||||||||||| || |||||||||    
T  5933143 accaagtgcggttttttgcgttttcagtttggattggtttggtttgcaattttt-tattgggttggttcggttttgaacacccta 5933226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 10069884 - 10070147
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||||||||||| ||||||||||||||||||||||||| ||     | |||||||||||| |||||||||||||||  ||||| ||||||||||||||     
T  10069884 aattagaatcaaacctgatggtgcaacaatggaaaaatcaaatcaaaaaagattattcttgggctatgtaattgggccggtacaagtttaagtaatattg 10069983  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| |||||||||||||||||     ||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  10069984 attattcttgcggtttggtttggtt-----gctgagatgcaaatcgcaaaccgaactgaactgtgcggttcagtgcaaaagtcatccgaattcatccgaa 10070078  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
     ||||||||||||||||| ||||||||||| |||| ||| ||||||||  ||||||||| |||||||||||    
T  10070079 ccaagtgcggttttttgcggtttcggtttggattggtttggtttgcgg--tttctattgggttggttcggt 10070147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 36 - 263
Target Start/End: Original strand, 13852667 - 13852899
Alignment:
Q  36 aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgc-----ggtttggtttggttcggttgctga 130  Q
    |||| ||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||| |||     ||||||||||||||| ||||||||    
T  13852667 aatcaaaagagattattcttgagctatgtaattgagttagtacatatttaaataatattcattattcttgcagtttggtttggtttggttcagttgctga 13852766  T
Q  131 aatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattg 230  Q
     ||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||  ||||  |||    
T  13852767 gatgcaaaccgcaaacagaaccgaaccactcggttcagtgcaaaagtcatccgaattcatccgaaccaagtgctgttttttgcggtttcaatttggtttg 13852866  T
Q  231 atttagtttgcggtttttctattgagttggttc 263  Q
     ||| ||||||||||||||||||| ||||||||    
T  13852867 gtttggtttgcggtttttctattgggttggttc 13852899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 27054475 - 27054226
Alignment:
Q  16 tgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtt 110  Q
    |||||||||||||||| ||||||||||     |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||    
T  27054475 tgatggtgcaacaatgaaaaaatcgaatcaaaagagattattcttgagttatgtaattgggctagtacatatttaagtaatattcattattcttgtggtt 27054376  T
Q  111 tggttt-----ggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccg-aatcaagtgcg 204  Q
    ||||||     |||||| ||||||| |||||||||||||||| |||| || ||  ||||| ||||||||||||||| ||||||||||| || ||||||||    
T  27054375 tggtttggtttggttcgattgctgatatgcaaaccgcaaaccaaaccaaatcgcacggtttagtgcaaaagtcatctgaattcatccgaaaccaagtgcg 27054276  T
Q  205 gttttttgcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    ||||||| | ||||||||||| |||| ||| |||||||||||||||||||    
T  27054275 gttttttacggtttcggtttggattggtttggtttgcggtttttctattg 27054226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 24361040 - 24360807
Alignment:
Q  16 tgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtt 110  Q
    |||||||||||||||| ||||||||||     || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  24361040 tgatggtgcaacaatgaaaaaatcgaatcaaaagggattattcttgagctatgtaattgggctagtacatatttaagtaatagtcattattcttgcggtt 24360941  T
Q  111 tggttt-----ggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcgg 205  Q
    ||||||     |||||||||||||| | ||||||||  ||||||||||||| ||| ||||| ||||||||||||||||||||||||| || |||||||||    
T  24360940 tggtttggtttggttcggttgctgagacgcaaaccg--aaccgaaccgaactgtgtggttctgtgcaaaagtcatccgaattcatccaaaccaagtgcgg 24360843  T
Q  206 ttttttgcagtttcggtttgaattgatttagtttgc 241  Q
    |||||||| ||||||||||| |||| ||| ||||||    
T  24360842 ttttttgcggtttcggtttggattggtttggtttgc 24360807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 104 - 277
Target Start/End: Complemental strand, 8768379 - 8768206
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| |||||||    
T  8768379 tgcggtttggtttggttcggttgctgagatgcaaaccacaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgc 8768280  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  8768279 ggttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 8768206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 47070041 - 47070211
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  47070041 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 47070140  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||| ||| || |||||||    
T  47070141 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggtttggttttgaacaccc 47070211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 112 - 277
Target Start/End: Complemental strand, 11206083 - 11205918
Alignment:
Q  112 ggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttttt 211  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| |||||||||||||||    
T  11206083 ggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggtttttt 11205984  T
Q  212 gcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    || ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  11205983 gcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 11205918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 53 - 275
Target Start/End: Original strand, 36509024 - 36509237
Alignment:
Q  53 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaacc 152  Q
    |||| |||||||||||||||| |||||  ||||||||||||| ||||||| ||||||||||||     || |||||||    ||||||||||||| ||||    
T  36509024 cttgggctatgtaattgggctcgtacaaatttaagtaatattgattattcttgcggtttggtt-----cgattgctga----caaaccgcaaaccaaacc 36509114  T
Q  153 gaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctat 252  Q
    ||||||  ||||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  36509115 gaaccgcacggttcaatgcaaaagtcatatgaattcatccgaaccaagtgcggttttttgcagtttcggtttgaattggtttggtttgcggtttttctat 36509214  T
Q  253 tgagttggttcggtattaaacac 275  Q
    || ||||||||||| || |||||    
T  36509215 tgggttggttcggttttgaacac 36509237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 3211852 - 3211682
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  3211852 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 3211753  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||| ||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  3211752 tttttgcggtttcgatttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 3211682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 10672192 - 10672362
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||  |||||||||||||| ||||||||| ||||||||||    
T  10672192 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 10672291  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||| ||| || |||||||    
T  10672292 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggtttggttttgaacaccc 10672362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 108 - 277
Target Start/End: Original strand, 12117974 - 12118143
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtt 207  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| |||||| ||||    
T  12117974 gtttggtttggtttggttgctgagatgcaaatcgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgtggtt 12118073  T
Q  208 ttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||| |||||||||||||  ||||||  ||||||||||||||||||| ||||||||||| || |||||||    
T  12118074 ttttacagtttcggtttgggttgattcggtttgcggtttttctattgggttggttcggttttgaacaccc 12118143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 31982423 - 31982211
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||| |||||||||||||||||||||||| ||     |||||||||||||| |||||||||||||||| |||||  |||||||||||||     
T  31982423 aattagaatcgaatttgatggtgcaacaatggaaaaatcaaatcaaaagagattattcttgggctatgtaattgggctggtacaaatttaagtaatattg 31982324  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||  |||||||||||||||||     ||| | |||||||||||||| | |||| ||||| || ||||||||||||||||||| |||||||||||||    
T  31982323 attatttttgcggtttggtttggtt-----gctaagatgcaaaccgcaaatcaaaccaaaccgcgcagttcagtgcaaaagtcatctgaattcatccgaa 31982229  T
Q  196 tcaagtgcggttttttgc 213  Q
    |||||||| |||||||||    
T  31982228 tcaagtgcagttttttgc 31982211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 114 - 276
Target Start/End: Original strand, 47903663 - 47903826
Alignment:
Q  114 tttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgc 213  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47903663 tttggttcggttgctgagatgcaaaccgcaaaccgaaacgaactgcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtgcggttttttgc 47903762  T
Q  214 agtttcggtttgaattgatttagtttgcgg-tttttctattgagttggttcggtattaaacacc 276  Q
     ||||||||||  |||| ||| |||||||| ||||| ||||| ||||||||||| || ||||||    
T  47903763 ggtttcggtttagattggtttggtttgcggttttttttattgggttggttcggttttgaacacc 47903826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 36 - 266
Target Start/End: Complemental strand, 18672942 - 18672706
Alignment:
Q  36 aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggttt-----ggttcggttgctga 130  Q
    |||| ||||||||||||| || |||||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||     ||||||||||||||    
T  18672942 aatcaaaagagattattcctgtgctatgtaattgggctagtacaagtttaagtaatattgattattattgcggtttggtttggtttggttcggttgctga 18672843  T
Q  131 aatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcgg-ttttttgcagtttcggtttgaatt 229  Q
     ||||||||| ||||||||||||||| | ||||| || ||||||| ||||||||||||||| |||  || ||||| |||||||||||||||  ||| |||    
T  18672842 gatgcaaaccacaaaccgaaccgaactgcgcggtccaatgcaaaaatcatccgaattcatctgaactaaatgcggtttttttgcagtttcgaattggatt 18672743  T
Q  230 gatttagtttgcggtttttctattgagttggttcggt 266  Q
    | ||   ||| |||||||||||||| ||| |||||||    
T  18672742 ggttcgatttacggtttttctattgggttagttcggt 18672706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 47204167 - 47204007
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||          ||||| ||| ||||||||||    
T  47204167 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaag----------tcatctgaaccaagtgcggt 47204078  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  47204077 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 47204007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 107 - 264
Target Start/End: Original strand, 40849334 - 40849491
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||| |||||||||||| |||| |||| ||||||| |||  |||||| |||||||| ||||| |||||| || |||    
T  40849334 ggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatacatccaaatcaaatgtggt 40849433  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcg 264  Q
    ||||||| |||||||||||  ||  || ||||||||||||||||||||  ||||||||    
T  40849434 tttttgcggtttcggtttgggttagttcagtttgcggtttttctattggattggttcg 40849491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 45898130 - 45898031
Alignment:
Q  178 catccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| |||  ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  45898130 catccgaattcatccgaaccaagtgcggttttttgcggtttcggtttggatttgtttggtttgcggtttttctattgggttggttcggttttgaacaccc 45898031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 29628689 - 29628859
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||| ||| |||||||| |||| |||| ||||||| ||   |||||| |||||||| ||||| || ||| | ||||    
T  29628689 ggtttggtttggttcggttggtaaaatgaaaatcgcaaaccaaaccaaaccatgcggttaaggaaaaaagtgatccgaatacatccaaaccaaatacggt 29628788  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||| ||||||||||||  ||| |||||||||||| ||||||||||  ||||||| || || |||||||    
T  29628789 tttttgaagtttcggtttgggttggtttagtttgcggcttttctattggattggttcagttttgaacaccc 29628859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 524475 - 524305
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||| |||||||||||| |||| |||| ||||||| ||   |||||| |||||||| ||||| || ||| | ||||    
T  524475 ggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaaccaaatacggt 524376  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||||| |||||  ||| ||  |||  ||||||||||||||| |||||||| | || |||||||    
T  524375 tttttgcagtttcagtttgggttggttcggttcacggtttttctattgaattggttcgattttgaacaccc 524305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 1335884 - 1336007
Alignment:
Q  154 aaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctatt 253  Q
    ||||| |||||| ||||||||||||||| |||||||||| || ||||||||||||||||| |||| | |||| |||| |||  |||| ||||||||||||    
T  1335884 aaccgcgcggtttagtgcaaaagtcatctgaattcatccaaaccaagtgcggttttttgcggttttgatttggattggtttgatttgtggtttttctatt 1335983  T
Q  254 gagttggttcggtattaaacaccc 277  Q
    | ||||||||| | || |||||||    
T  1335984 gggttggttcgattttgaacaccc 1336007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 48675433 - 48675562
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||||||||||| |||||||||||||||||||| |||| ||     |||| ||||| || |||||||||||| ||||| |||||||||||||||||||     
T  48675433 aattagaatcaaacctgatggtgcaacaatggaataatcaaaccaaaagaggttattttttagctatgtaattaggctaatacatgtttaagtaatattt 48675532  T
Q  96 attattcatgcggtttggtttggttcggtt 125  Q
    ||||||| | ||||||| ||| ||| ||||    
T  48675533 attattcttacggtttgattttgtttggtt 48675562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 31287382 - 31287214
Alignment:
Q  109 tttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttt 208  Q
    |||||||||||||||||| | ||||  ||||||||||||||||| |||| ||||||| |||  |||| | ||| |||| ||||||||  |  |||| |||    
T  31287382 tttggtttggttcggttggtaaaattaaaaccgcaaaccgaaccaaaccatgcggttgagtaaaaaaatgatctgaatacatccgaactatatgcgattt 31287283  T
Q  209 tttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| ||||||||||| |||| ||  ||||||| ||||||| |||  |||||||||| || |||||||    
T  31287282 tttgcggtttcggtttggattggttcggtttgcgatttttcttttggattggttcggttttgaacaccc 31287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 104 - 276
Target Start/End: Complemental strand, 31011375 - 31011203
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||| ||| ||||| | ||||  ||||| ||||||| ||| ||||  |||||| |||   |||   ||| |||| |||||||| ||| |      
T  31011375 tgcggtttggtttcgtttggttggtaaaataaaaacctcaaaccgcaccaaaccacgcggttgagtaagaaaacgatctgaatacatccgaaccaaataa 31011276  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    |||||||||||||||| |||||||||| ||| |||||||||||||||||||  |||||||||| || ||||||    
T  31011275 ggttttttgcagtttcagtttgaattggtttggtttgcggtttttctattggattggttcggttttgaacacc 31011203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 113 - 277
Target Start/End: Original strand, 11399603 - 11399766
Alignment:
Q  113 gtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttg 212  Q
    |||||||||||||  | ||||| |||||||||||| || | |||| ||||||| | |  |||||| |||||||| ||||| || ||| || |||||||||    
T  11399603 gtttggttcggttagtaaaatgaaaaccgcaaaccaaatcaaaccatgcggttgactaaaaaagtgatccgaatacatccaaaccaa-tgtggttttttg 11399701  T
Q  213 cagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    | ||||| |||||  ||| || ||||||||| ||||||||||  |||||| ||| || |||||||    
T  11399702 cggtttcagtttgggttggttcagtttgcgggttttctattggattggtttggttttgaacaccc 11399766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 30079122 - 30079034
Alignment:
Q  188 catccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    |||||||| ||  ||| ||||||||  |||||||||||||||||||  |||||||||||||||||||  |||||||||| || ||||||    
T  30079122 catccgaaccagatgcagttttttgtggtttcggtttgaattgattcggtttgcggtttttctattggattggttcggttttgaacacc 30079034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 277
Target Start/End: Complemental strand, 10338140 - 10337969
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaag--tcatccgaattcatccgaatcaagtgcgg 205  Q
    ||||||||| ||||||||| | ||||  ||||| |||| |||||| |||| ||||||| ||   ||||   | |||||||| |||||||| ||| ||  |    
T  10338140 gtttggtttagttcggttggtaaaatcaaaaccacaaatcgaaccaaaccatgcggttgagcaaaaaaaaatgatccgaatacatccgaaccaaatgttg 10338041  T
Q  206 ttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||||| |||||| |||  ||  |||||| |||||||| |||| ||| |||||| || |||||||    
T  10338040 ttttttgcagttttggtttggattagttcggtttgcagtttttcttttgaattgtttcggttttgaacaccc 10337969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 27100218 - 27100114
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||| ||||| | ||||  |||||||||||| |||| |||| | ||||| |||  |||||| ||| |||| |||  ||||||| |||    
T  27100218 tgcggtttggtttggtttggttggtaaaatcaaaaccgcaaaccaaaccaaaccatacggttgagtaaaaaagtgatctgaatacatttgaatcaaatgc 27100119  T
Q  204 ggttt 208  Q
    |||||    
T  27100118 ggttt 27100114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 27178085 - 27178189
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||| ||||| | ||||  |||||||||||| |||| |||| | ||||| |||  |||||| ||| |||| |||  ||||||| |||    
T  27178085 tgcggtttggtttggtttggttggtaaaatcaaaaccgcaaaccaaaccaaaccatacggttgagtaaaaaagtgatctgaatacatttgaatcaaatgc 27178184  T
Q  204 ggttt 208  Q
    |||||    
T  27178185 ggttt 27178189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 278
Target Start/End: Complemental strand, 29211206 - 29211065
Alignment:
Q  136 aaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgattta 235  Q
    |||| ||||||| |||| |||| ||||||| |||  |||||| ||||||||  |||| || ||| ||||||||||||| | || | |||| |||| ||      
T  29211206 aaactgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatatatccaaaccaaatgcggttttttgcggatttgatttggattggttcg 29211107  T
Q  236 gtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
    |||||| | ||||||||||  |||||||||| || ||||||||    
T  29211106 gtttgcag-ttttctattggattggttcggttttgaacaccct 29211065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 22299006 - 22299051
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaacc 152  Q
    |||||||||||||||||||| | ||||  |||||||||||||||||    
T  22299006 ggtttggtttggttcggttggtaaaatcaaaaccgcaaaccgaacc 22299051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 8568085 - 8567985
Alignment:
Q  179 atccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
    |||||||| |||||||| ||| |||| |||||| |||||||| ||||||||  ||  ||||||  ||||||| |||  || |||| || |||||||||||    
T  8568085 atccgaatacatccgaaccaaatgcgattttttacagtttcgatttgaatttgttcggtttgcaatttttcttttggatttgttcagttttaaacaccct 8567986  T
Q  279 a 279  Q
    |    
T  8567985 a 8567985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 8860531 - 8860599
Alignment:
Q  194 aatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggtt 262  Q
    |||||| ||||||||||| |||| || |||||||||  || |||||||| ||||||||| | |||||||    
T  8860531 aatcaaatgcggttttttacagtctcagtttgaatttgttcagtttgcgatttttctatcgtgttggtt 8860599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 10070876 - 10070840
Alignment:
Q  155 accgtgcggttcagtgcaaaagtcatccgaattcatc 191  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  10070876 accgtacggttcagtgcaaaagttatccgaattcatc 10070840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 30079198 - 30079158
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaacc 147  Q
    |||||||||||||||||||||| || || ||||||||||||    
T  30079198 ggtttggtttggttcggttgctaaactgaaaaccgcaaacc 30079158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 37376240 - 37376280
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaacc 147  Q
    |||||||||||||||||||| | ||||| ||||||||||||    
T  37376240 ggtttggtttggttcggttggtaaaatgaaaaccgcaaacc 37376280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 182; Significance: 4e-98; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 4 - 276
Target Start/End: Original strand, 14549552 - 14549829
Alignment:
Q  4 tagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcatt 98  Q
    ||||||| || |||||||| ||||||||||||| |||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14549552 tagaatcgaacctgatggtacaacaatggaaaattcgaatcaaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcatt 14549651  T
Q  99 attcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatca 198  Q
    |||| | |||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  14549652 attcttacggtttggtttggttcggatgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaacca 14549751  T
Q  199 agtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    |||||| |||||||| ||||||||||| |||| ||| |||| | |||||||||||| ||||||||||| |||||||||    
T  14549752 agtgcgattttttgcggtttcggtttggattggtttggtttacagtttttctattgggttggttcggttttaaacacc 14549829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 36 - 278
Target Start/End: Original strand, 3682279 - 3682521
Alignment:
Q  36 aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggttcggttgctgaaatgc 135  Q
    |||| |||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  3682279 aatcaaaagagattattcttaggttatgtaattgggctagtacatgtttaggtaatattcattattcttgcggtttggtttggttcggttgctgagatgc 3682378  T
Q  136 aaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgattta 235  Q
    |||||||||||| |||| ||||| ||||||||||| ||||||||||||| |||||  ||| ||||||||||||||||| |||| | |||| |||| |||     
T  3682379 aaaccgcaaaccaaaccaaaccgcgcggttcagtggaaaagtcatccgatttcatttgaaccaagtgcggttttttgcggttttgatttggattggtttg 3682478  T
Q  236 gtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
     |||||||||||||||||| ||||||||||| || ||||||||    
T  3682479 atttgcggtttttctattgggttggttcggttttgaacaccct 3682521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 18169788 - 18169508
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||||||||||| |||||||||||| |||||||||||||||     |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18169788 aattagaatcaaacctgatggtgcaataatggaaaaatcgaatcgatagagattattcttgaggtatgtaattgggctagtacatgtttaagtaatattc 18169689  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| ||| ||||| |||||||||| ||| || |||||||||||||||| |||||||||  |||||||||||||||||| ||||||| |||||||||    
T  18169688 attattcttgcagtttgatttggttcggctgccgagatgcaaaccgcaaaccaaaccgaaccacgcggttcagtgcaaaagtaatccgaa-tcatccgaa 18169590  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||| |||| ||||||||  |||||||||| |||| ||| ||||||| ||||| ||||  ||||||| ||| || |||||||    
T  18169589 ccaactgcgattttttgcgttttcggtttggattggttttgtttgcgatttttttatttggttggtttggttttgaacaccc 18169508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 18633354 - 18633074
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||||||||||| |||||||||||| |||||||||||||||     |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18633354 aattagaatcaaacctgatggtgcaataatggaaaaatcgaatcgatagagattattcttgaggtatgtaattgggctagtacatgtttaagtaatattc 18633255  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| ||| ||||| |||||||||| ||| || |||||||||||||||| |||||||||  |||||||||||||||||| ||||||| |||||||||    
T  18633254 attattcttgcagtttgatttggttcggctgccgagatgcaaaccgcaaaccaaaccgaaccacgcggttcagtgcaaaagtaatccgaa-tcatccgaa 18633156  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||| |||| ||||||||  |||||||||| |||| ||| ||||||| ||||| ||||  ||||||| ||| || |||||||    
T  18633155 ccaactgcgattttttgcgttttcggtttggattggttttgtttgcgatttttttatttggttggtttggttttgaacaccc 18633074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 60 - 274
Target Start/End: Original strand, 44673109 - 44673328
Alignment:
Q  60 tatgtaattgggctagtacatgtttaagtaatattcattattcatgc-----ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccga 154  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||     |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  44673109 tatgtaattgggctagtacatgtttaagtaatattcattattcttgcagtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccga 44673208  T
Q  155 accgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||| |||  ||| || |||||||||||    
T  44673209 accgcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtacggttttttgcagttttagtttgaattggtttgatttacgatttttctattg 44673308  T
Q  255 agttggttcggtattaaaca 274  Q
    |||||||||| | |||||||    
T  44673309 agttggttcgtttttaaaca 44673328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 36827554 - 36827334
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaat-----cgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36827554 aattagaatcgaacctgatggtgcaacaatggaaaaattgaatcgaaagagattaatcttgagctatgtaattgggctagtacatgtttaagtaatattc 36827455  T
Q  96 attattcatgcggtttggttt-----ggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||||||||     ||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||     
T  36827454 attattcttgcggtttggtttggtttggttcggctgctgagatgcaaaccgcaaaccgaaccaaaccgtgtggttcagtgcaaaagtcattcgaattcag 36827355  T
Q  191 ccgaatcaagtgcggtttttt 211  Q
    ||||| |||||||| ||||||    
T  36827354 ccgaaccaagtgcgatttttt 36827334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 30392400 - 30392673
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||||||||||| || || ||||| ||||||||||||||||     |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  30392400 aattagaatcaaacctcatagtgcagcaatggaaaaatcgaatcaaaagagattattgttgggctatgtaattgggctagtacatgtttaagtaatattc 30392499  T
Q  96 attattcatgcggtt-----tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||     |||||||||||||||| ||| || |||||||||||| ||||| ||||| ||||||||||  |||||||||||||||||||    
T  30392500 attattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaactgaaccaaaccgcgcggttcagtaaaaaagtcatccgaattcat 30392599  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcg 264  Q
    || || ||||||||||||||| | ||||||  |||||||  |||| ||| || |||||||||||  ||||||||    
T  30392600 ccaaaccaagtgcggttttttacggtttcgaattgaattagtttaatttacgatttttctattggattggttcg 30392673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 22 - 277
Target Start/End: Complemental strand, 6200677 - 6200412
Alignment:
Q  22 tgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggttt 116  Q
    |||||||||||||||||||||     |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6200677 tgcaacaatggaaaaatcgaatcaaaagagattattcttgggttatgtaattgggctagtacatgtttcagtaatattcattattcttgcggtttggttt 6200578  T
Q  117 ggttcggtt-----gctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttttt 211  Q
    |||| ||||     ||| | |||||||||  |||||||||  |||||  || |||||||||||||||||||||||||||||||| ||| ||| |||||||    
T  6200577 ggtttggtttggttgctaagatgcaaaccaaaaaccgaacgaaaccgcacgattcagtgcaaaagtcatccgaattcatccgaaccaaatgcagtttttt 6200478  T
Q  212 gcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    || |||||| |||| ||||||||  |||| ||||||||||||  ||||||||||| || |||||||    
T  6200477 gcggtttcgatttggattgatttgatttgaggtttttctattaggttggttcggttttgaacaccc 6200412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 36910094 - 36909892
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattca 96  Q
    ||||||||||||| |||||||||||||||||||||||| |||    | ||||||||||||||| ||||||||||||||||||||         |||||||    
T  36910094 aattagaatcaaacctgatggtgcaacaatggaaaaatggaatcaaaaagattattcttgagc-atgtaattgggctagtacat---------atattca 36910005  T
Q  97 ttattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaat 196  Q
    |||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| || ||||| |||||||||| ||  ||||||||||||     
T  36910004 ttattcttgcggtttggtatggttcggttcctgagatgcaaaccgcaaaccgaaccgaaccgcgcagttcaatgcaaaagtcgtctaaattcatccgaac 36909905  T
Q  197 caagtgcggtttt 209  Q
     |||||| |||||    
T  36909904 taagtgcagtttt 36909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 3006278 - 3006113
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||      ||||||||||  |||||| ||||||| ||||||||| |||||||||     
T  3006278 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgc-----gcggttcagtctaaaagtaatccgaactcatccgaaccaagtgcgga 3006184  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  3006183 tttttgctgtttcggtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 3006113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 10661469 - 10661742
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  ||||||| |||||||| ||||||||||     | |||| |||||||||||||||||| |||||||||||||||||||  ||||||    
T  10661469 aattagaatcgaacatgatggtacaacaatgaaaaaatcgaatcaaaaaagataattcttgagctatgtaatcgggctagtacatgtttaagatatattc 10661568  T
Q  96 attattcatgcggtttggtttggttc-----ggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||| | |||||||||||||||||      ||||||||| |||||||| ||||||| |||| ||||| | |||||||||||||||          ||||    
T  10661569 attatccttgcggtttggtttggtttagtttggttgctgagatgcaaac-gcaaaccaaaccaaaccgcgtggttcagtgcaaaag----------tcat 10661657  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    | ||| ||||||||||||||| | ||||| ||||| |||| ||| ||||||||||||||||||  ||||||||||| || |||||    
T  10661658 ctgaaccaagtgcggttttttacggtttcagtttggattggtttggtttgcggtttttctattaggttggttcggttttgaacac 10661742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 33068913 - 33069125
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||| |||||||||||||||||||||||| ||     |||||||||||||||| |||||||||||||| |||||  |||||||||||||     
T  33068913 aattagaatcgaatttgatggtgcaacaatggaaaaatcaaatcaaaagagattattcttgagttatgtaattgggctggtacaaatttaagtaatattg 33069012  T
Q  96 attattcatgcggtttg-----gtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||  || ||||||     |||||||||||||||| | |||||||||||||| | |||||   |||  |||||||||||||||||||||||| ||||    
T  33069013 attatttttgtggtttggtttcgtttggttcggttgctaagatgcaaaccgcaaatcaaaccg---cgt--ggttcagtgcaaaagtcatccgaaatcat 33069107  T
Q  191 ccgaatcaagtgcggttt 208  Q
    || || ||||||||||||    
T  33069108 ccaaaccaagtgcggttt 33069125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 5802605 - 5802501
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||| ||| ||||||||| |||||||    
T  5802605 tgcggtttggtttggtttggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatctgaactcatccgaaccaagtgc 5802506  T
Q  204 ggttt 208  Q
    |||||    
T  5802505 ggttt 5802501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 12659877 - 12659707
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||  ||||||||||| ||||| |||| ||||||| |||   |||   |||||||| |||||||| ||| ||||||    
T  12659877 ggtttggtttggttcggttggtaaaatagaaaccgcaaactgaaccaaaccatgcggttgagtaagaaaacgatccgaatacatccgaaccaaatgcggt 12659778  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  |||||||||||||| ||||  ||| |||||| || |||||||    
T  12659777 tttttgcggtttcggtttggattggttcggtttgcggtttttcaattggattgattcggttttgaacaccc 12659707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 42496565 - 42496452
Alignment:
Q  88 taatattcattattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaatt 187  Q
    ||||||||||||||| ||||||||| ||||||||| ||| | | ||  ||| | |||| ||||||||||||||||||||||||||||| |||| | ||||    
T  42496565 taatattcattattcttgcggtttgatttggttcgattgttaagatataaatcacaaatcgaaccgaaccgtgcggttcagtgcaaaaatcattcaaatt 42496466  T
Q  188 catccgaatcaagt 201  Q
    ||||||||| ||||    
T  42496465 catccgaattaagt 42496452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 11219441 - 11219611
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||  ||||||||||||||||| |||| || | || |||  |||| | |||||||| |||||||| ||| ||| ||    
T  11219441 ggtttggtttggttcggttggtaaaatcaaaaccgcaaaccgaaccaaaccatgtgattgagtaaaaaaatgatccgaatacatccgaaccaaatgctgt 11219540  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||| | |||| |||| ||  ||||||||||||||| |||  |||||| ||| || |||||||    
T  11219541 tttttgcggttttgatttggattggttcggtttgcggtttttcttttggattggtttggttttgaacaccc 11219611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 277
Target Start/End: Complemental strand, 31477821 - 31477650
Alignment:
Q  106 cggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcgg 205  Q
    ||||||||||||||||||||| | ||||| |||||||||||| |||| |||| || |||| ||    ||| | |||||| | || ||||| ||| |||||    
T  31477821 cggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgtggttgagcaagaaaatgatccgattacacccgaaccaaatgcgg 31477722  T
Q  206 ttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||| ||||  |||||  ||  |||| ||||| ||||||||||||| ||| |||||| ||||||||||    
T  31477721 ttttttgcggttttagtttgggttagtttaatttgccgtttttctattgaattgcttcggttttaaacaccc 31477650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 12193002 - 12192909
Alignment:
Q  182 cgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    ||||| |||||||| ||  ||||||||||||| ||||||||||| |||||||  ||||||||||||||| |||  |||||||||| || |||||    
T  12193002 cgaatacatccgaaccatatgcggttttttgcggtttcggtttggattgattcggtttgcggtttttcttttggattggttcggttttgaacac 12192909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 12437430 - 12437337
Alignment:
Q  182 cgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    ||||| |||||||| ||  ||||||||||||| ||||||||||| |||||||  ||||||||||||||| |||  |||||||||| || |||||    
T  12437430 cgaatacatccgaaccatatgcggttttttgcggtttcggtttggattgattcggtttgcggtttttcttttggattggttcggttttgaacac 12437337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 40436984 - 40437072
Alignment:
Q  188 catccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    |||||||| ||| |||||||||||||||||||  ||||  |||||||  ||||| ||||||||||||  |||||||||| |||||||||    
T  40436984 catccgaaccaaatgcggttttttgcagtttcattttgggttgatttgatttgcagtttttctattggattggttcggttttaaacacc 40437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 275
Target Start/End: Original strand, 11017442 - 11017581
Alignment:
Q  136 aaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgattta 235  Q
    |||||||||||| |||| || | ||||||| |||  |||| |  ||||||| |||||||| |||||||  |||||||| |||||  |||  |||||||      
T  11017442 aaaccgcaaaccaaaccaaatcatgcggtttagtaaaaaaattgtccgaatacatccgaaccaagtgccattttttgcggtttcaatttagattgattcg 11017541  T
Q  236 gtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    ||||||||||||||||||   || ||||||| ||||||||    
T  11017542 gtttgcggtttttctattttattagttcggttttaaacac 11017581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 4785724 - 4785854
Alignment:
Q  136 aaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgattta 235  Q
    |||| |||||||||||| |||| ||||||| |||  |||| | |||| ||| |||| ||| ||| |||  |||||||| |||| | |||| |||| ||      
T  4785724 aaactgcaaaccgaaccaaaccatgcggttgagtaaaaaattgatccaaatacatctgaaccaaatgcaattttttgcggttttgatttggattggttcg 4785823  T
Q  236 gtttgcggtttttctattgagttggttcggt 266  Q
    |||||||||||||||||||  ||||||||||    
T  4785824 gtttgcggtttttctattggattggttcggt 4785854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 5802483 - 5802442
Alignment:
Q  236 gtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||||||||||| ||||||||||| || |||||||    
T  5802483 gtttgcggtttttctattgggttggttcggttttgaacaccc 5802442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 23344772 - 23344723
Alignment:
Q  223 ttgaattgatttagtttgcggtttttctattgagttggttcggtattaaa 272  Q
    ||||||||||||| ||| || |||||||||||||||||||| || |||||    
T  23344772 ttgaattgatttaatttacgatttttctattgagttggttcagttttaaa 23344723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 33069139 - 33069184
Alignment:
Q  232 tttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  33069139 tttggtttgcggtttttctattgggttggttcggttttgaacaccc 33069184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 8036170 - 8036210
Alignment:
Q  237 tttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||||||| ||||||||||||||| || |||||||    
T  8036170 tttgcggtttttcttttgagttggttcggttttgaacaccc 8036210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 41346474 - 41346546
Alignment:
Q  206 ttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
    ||||||||  ||||||||| | ||||||  |||||||||||||||||||  || ||||||| || ||||||||    
T  41346474 ttttttgcgatttcggtttaacttgattaggtttgcggtttttctattggattagttcggttttgaacaccct 41346546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 1e-95; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 25298018 - 25297729
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||||||     || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25298018 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagcgattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 25297919  T
Q  96 attattcatgcggtttggtttggtt-----cggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||||||||||||     |||||||||| ||||||||| |||||| |||||||||||||||||||  |||||||||||||||||||||    
T  25297918 attattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccacaaaccaaaccgaaccgtgcggttcaaagcaaaagtcatccgaattcat 25297819  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccctag 280  Q
    ||||||||||||||||||||| | ||||| ||||| |||| ||||||||||| ||||||||||| ||||||||||| || ||||||||||    
T  25297818 ccgaatcaagtgcggttttttacggtttcagtttggattggtttagtttgcgatttttctattgggttggttcggttttgaacaccctag 25297729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 11376207 - 11376488
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||||||     || ||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  11376207 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagcgattattcttgggctatgcaattgagctagtacatgtttaagtaatattc 11376306  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    | ||||| |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  11376307 agtattcttgcggtttggtttggttcagttgctgagatgcaaactgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaattcatccgaa 11376406  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     |||||||||||||| || |||| |||||| |||| |||  |||||||||||||||||| ||||||||||| || |||||||    
T  11376407 ccaagtgcggtttttcgcggttttggtttggattggtttgatttgcggtttttctattgggttggttcggttttgaacaccc 11376488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 18360121 - 18360408
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  |||||||||||||||||||||||||||     |||||||||| | | |||||||||||||||||||||| ||||||||||||||     
T  18360121 aattagaatcgaacatgatggtgcaacaatggaaaaatcgaatcaaaagagattattttcgggctatgtaattgggctagtacaagtttaagtaatattg 18360220  T
Q  96 attattcatgcggtt-----tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||     |||||||||||||||||||| |||||||| | ||||| |||||||||| | |||||| |||||||||||| |||||| ||    
T  18360221 attattcttgcggtttggtttggtttggttcggttgctgagatgcaaactgtaaaccaaaccgaaccgcgtggttcaatgcaaaagtcattcgaatttat 18360320  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
    ||||| |||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18360321 ccgaaccaagtgcggttttttggaatttcggtttggattggtttagtttgcggtttttctattgggttggttcggttttaaacaccct 18360408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 19936882 - 19936601
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  |||||||||||||||| ||||||||||     | | ||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  19936882 aattagaatcgaacatgatggtgcaacaatgaaaaaatcgaatcaaaatatattattcttgagctatgtatttgagctagtacatgtataagtaatattc 19936783  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| ||||||||||||||||| ||||||||| || ||||| |||||||||||||||||| || |||||||| ||||| |||| |||||||||||||    
T  19936782 attattcttgcggtttggtttggtttggttgctgagatacaaactgcaaaccgaaccgaaccgcgcagttcagtgaaaaagacatctgaattcatccgaa 19936683  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||||||||||||||||| ||||||||||| |||| ||| |||  |||||||||||||| ||||||||||| || |||||||    
T  19936682 ccaagtgcggttttttgcggtttcggtttggattggtttggttcacggtttttctattgggttggttcggttttgaacaccc 19936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 44979537 - 44979246
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||  || || |||||||||||||||||||||||||     ||||||||||| || ||||||||||||||||||||||||||||||||| ||||    
T  44979537 aattagaattgaacctcatggtgcaacaatggaaaaatcgaatcaaaagagattattcctgggctatgtaattgggctagtacatgtttaagtaacattc 44979438  T
Q  96 attattcatgcggtttggtttggttcggtt-----gctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||||||||||||||||| ||||     ||||| |||||||||||||||| || | ||||| |||||||||||||||| ||||||||||||||    
T  44979437 attattcttgcggtttggtttggtttggttcggtagctgagatgcaaaccgcaaaccaaatcaaaccgcgcggttcagtgcaaaattcatccgaattcat 44979338  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaa-----ttgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| ||||||||||||||||| |||| |||||| |     ||| ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  44979337 ccgaaccaagtgcggttttttgcggttttggtttggattggtttggtttggtttgcggtttttctattgggttggttcggttttgaacaccc 44979246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 34910630 - 34910919
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  |||||||||||||||||||||||||||     ||| |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  34910630 aattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcaaaagatattattcttgggctatgtaattgggttagtacatgtttaagtaatattc 34910729  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccg-----caaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||||||||| |||||||||| | || |||||||     |||||||||||||| || |||||| | ||||||||||||| ||||||||    
T  34910730 attattcttgcggtttggtttgtttcggttgctcagattcaaaccgtaaaccaaaccgaaccgaaacgcgcggtttattgcaaaagtcatctgaattcat 34910829  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccctag 280  Q
    ||||| |||||| | |||||| |||||| |||||  ||| ||||  ||||||| |||||||||| ||||| ||||| |||||||||||||    
T  34910830 ccgaaccaagtgtgattttttacagttttggtttacattaatttgatttgcggattttctattgggttggatcggttttaaacaccctag 34910919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 14 - 264
Target Start/End: Complemental strand, 17916607 - 17916353
Alignment:
Q  14 tctgatggtgcaacaatggaaaaa-----tcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcgg 108  Q
    ||||||||||||| ||||||||||     || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17916607 tctgatggtgcaataatggaaaaaatgaatcaaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcgg 17916508  T
Q  109 tttggtttggt-----tcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    |||||||||||     ||||||||||| ||||||||| |||||| |||||||||| || |      | ||||||||| ||||||||||||||||||||||    
T  17916507 tttggtttggtttggctcggttgctgagatgcaaaccacaaaccaaaccgaaccgcgcag------gaaaaagtcattcgaattcatccgaatcaagtgc 17916414  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcg 264  Q
    ||||||||||||||| | |||| |||||||| |||||| |||||| ||||  |||||||||    
T  17916413 ggttttttgcagttttgatttggattgatttggtttgcagtttttttattaggttggttcg 17916353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 9811753 - 9811923
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  9811753 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 9811852  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  9811853 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 9811923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 16579003 - 16579173
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| |||||||| |    
T  16579003 ggtttggtttggttcagttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcgat 16579102  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  16579103 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 16579173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 20420791 - 20420961
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  20420791 ggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 20420890  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||| |||||  ||| ||  ||||||||||||||||||| |||||||| || || |||||||    
T  20420891 tttttgcggtttcagtttgggttggttcggtttgcggtttttctattgggttggttcagttttgaacaccc 20420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 36413007 - 36412837
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||  |||||||||  |||||||||||||| ||||||||| ||||||||||    
T  36413007 ggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 36412908  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||   |||||||||||||||||| ||||||||||| || |||||||    
T  36412907 tttttgcggtttcggtttgggttggttcgatttgcggtttttctattgggttggttcggttttgaacaccc 36412837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 44035630 - 44035824
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  |||| ||||||||||| ||||||||||     |||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  44035630 aattagaatcgaacttgatcgtgcaacaatgaaaaaatcgaatcaaaagagattattcttgagttatgtaactgagctagtacatgtttaagtaatattc 44035729  T
Q  96 attattcatgc-----ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaa 185  Q
    ||||||  |||     |||||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||||||||||    
T  44035730 attatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgtaaaccaaaccgaaccgcgcggttcagtgcaaaagtcatccgaa 44035824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 42785176 - 42785027
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||||| | |||||| |||||||||||||          |||| ||||||||||    
T  42785176 ggtttggtttggttcggtttctgagatgcaaaccgcaaaccaaaccgaaccgcgtggttcaatgcaaaagtcatc----------cgaaccaagtgcggt 42785087  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    ||||||| ||||||||||| | |||||| |||| |||||||| |||||||||||||||||    
T  42785086 tttttgcggtttcggtttgtactgatttggtttacggtttttttattgagttggttcggt 42785027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 41166630 - 41166800
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||| |||||||||||| || | |||| ||||||| |||| |||||| ||| |||| ||||| || ||| ||||||    
T  41166630 ggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaatcaaaccatgcggttgagtgaaaaagtgatctgaatgcatccaaaccaaatgcggt 41166729  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| | |||| ||||||| ||| || ||||||| |||||| |||||  ||| |||||| || |||||||    
T  41166730 tttttacggttttggtttgagttggttcagtttgcagtttttttattggattgcttcggttttgaacaccc 41166800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 113 - 253
Target Start/End: Complemental strand, 27301103 - 27300963
Alignment:
Q  113 gtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttg 212  Q
    |||||||| ||||  | ||||| |||||||||||| |||| |||| ||||||| ||   |||||| |||||||| ||||| |||||| ||||||||||||    
T  27301103 gtttggtttggtttgtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgaggaaaaaagtgatccgaatacatccaaatcaaatgcggttttttg 27301004  T
Q  213 cagtttcggtttgaattgatttagtttgcggtttttctatt 253  Q
    | |||||| |||| |||| ||  ||||||||||||||||||    
T  27301003 cggtttcgatttggattggttcggtttgcggtttttctatt 27300963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 279
Target Start/End: Complemental strand, 12041203 - 12041036
Alignment:
Q  112 ggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttttt 211  Q
    ||||||||| ||||| | ||||| |||||||||||| |||| |||  ||||||| |||  |||||| |||||||| ||||| || ||| |||||||||||    
T  12041203 ggtttggtttggttggtaaaatgaaaaccgcaaaccaaaccaaactatgcggttgagtaaaaaagtgatccgaatacatccaaaccaaatgcggtttttt 12041104  T
Q  212 gcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacccta 279  Q
     | |||||||||||  ||| || | |||||||||| |||||||  ||||||| || || |||||||||    
T  12041103 acggtttcggtttgggttggttcaatttgcggtttatctattggattggttctgttttgaacacccta 12041036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 275
Target Start/End: Original strand, 44085965 - 44086132
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| ||||||| ||||| |||||| |||| |||| |||||||||| | |||| | ||| || | ||||  || ||| |||| |    
T  44085965 ggtttggtttggttcggttggtgaaatgaaaaccacaaaccaaaccaaaccatgcggttcagaggaaaa-taatctgattacatcaaaaccaaatgcgat 44086063  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    ||||||||||||| |||||  || |||   ||| |||||||||||||| |||| |||| | ||||||||    
T  44086064 tttttgcagtttcagtttgggttaattcgatttacggtttttctattgggttgattcgattttaaacac 44086132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 5862272 - 5862108
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||| ||||| | ||||  ||||| ||||||||||| || | ||||||| |||  ||||||  || |||| |||||||| ||| |||| |    
T  5862272 ggtttggtttggtttggttggtaaaatcaaaaccacaaaccgaaccaaaacatgcggttgagtaaaaaagtgctctgaatacatccgaaccaaatgcgat 5862173  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||      ||||||| |||| || | ||||||||||||||||||| |||||||||| || |||||||    
T  5862172 tttttg------cggtttggattggttcaatttgcggtttttctattgaattggttcggttttgaacaccc 5862108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 266
Target Start/End: Original strand, 12884849 - 12885009
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaag-tcatccgaattcatccgaatcaagtgcgg 205  Q
    ||||||||||||||| |||| | ||||  ||||| ||||||||||| |||| |||| || |||  ||||  | |||||||| |||| ||| ||| ||||     
T  12884849 ggtttggtttggttcagttggtaaaatcaaaaccccaaaccgaaccaaaccatgcgattgagtaaaaaaaatgatccgaatacatctgaaccaaatgcga 12884948  T
Q  206 ttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    |||||||| |||||| ||| ||||| ||  |||||| ||||||||||||  ||||||||||    
T  12884949 ttttttgcggtttcgttttaaattggttcggtttgcagtttttctattggattggttcggt 12885009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 1331459 - 1331621
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    |||||||||||||||||| |||| | ||||  |||| ||||||| |||| |||| || |||| ||   |||||| |||||||| ||||| |||||| |||    
T  1331459 tgcggtttggtttggttcagttgataaaataaaaacggcaaaccaaaccaaaccatgtggttgaggaaaaaagtgatccgaatacatccaaatcaaatgc 1331558  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    ||||||||||  |||| ||||   ||| ||   ||||| ||||||||||||| || |||||||    
T  1331559 ggttttttgcgatttcagtttaggttggttcgatttgcagtttttctattgaatttgttcggt 1331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20420520 - 20420561
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa 42  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  20420520 aattagaatcaaacctgatgatgcaacaatggaaaaatcgaa 20420561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 11695930 - 11696105
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatc--aagt 201  Q
    ||||||||||||||||| ||||| | ||||  ||||||||||||||||| |||| || |||  |||  |||| | || ||||| ||| |||| |  | |     
T  11695930 tgcggtttggtttggtttggttggtaaaatcaaaaccgcaaaccgaaccaaaccatgtggtcaagtaaaaaattgatacgaatacattcgaaccagatgg 11696029  T
Q  202 gcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    | |||||||||| ||||| |||||  ||| || | ||||||||||||||||||  |||||||| | || |||||||    
T  11696030 ggggttttttgcggtttcagtttgtgttggttcaatttgcggtttttctattggattggttcgattttgaacaccc 11696105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 11678452 - 11678512
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggt 164  Q
    ||||||||||||||||| ||||| | ||||  |||||||||||| |||| |||| ||||||    
T  11678452 tgcggtttggtttggtttggttggtaaaatcaaaaccgcaaaccaaaccaaaccatgcggt 11678512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 18153371 - 18153327
Alignment:
Q  109 tttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccg 153  Q
    |||||||||||||||||| | ||||  ||||||||||||||||||    
T  18153371 tttggtttggttcggttgttaaaataaaaaccgcaaaccgaaccg 18153327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 6e-91; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 15 - 266
Target Start/End: Complemental strand, 12165691 - 12165430
Alignment:
Q  15 ctgatggtgcaacaatggaaa-----aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggt 109  Q
    |||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12165691 ctgatggtgcaacaatggaaagatcgaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggt 12165592  T
Q  110 ttggttt-----ggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcg 204  Q
    |||||||     ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  12165591 ttggtttcgtttggttcagttgctgagatgcaaactgcaaaccgaaccgaaccatgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtgcg 12165492  T
Q  205 gttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    ||||||||| ||||||||||| |||| ||| ||||||||||||| ||||| || ||||||||    
T  12165491 gttttttgcggtttcggtttggattggtttggtttgcggtttttttattgggtcggttcggt 12165430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 4 - 277
Target Start/End: Complemental strand, 32520979 - 32520701
Alignment:
Q  4 tagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcatt 98  Q
    ||||||| || ||||||||||||||||| ||||||||||     ||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||     
T  32520979 tagaatcgaacctgatggtgcaacaatgaaaaaatcgaatcaaaagagattattcttaaattatgtaattgggctagtacatctttaagtaatattcatc 32520880  T
Q  99 attcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatca 198  Q
    |||| ||||||||||||||||||||||||||| ||||| | |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| ||    
T  32520879 attcttgcggtttggtttggttcggttgctgagatgcagatcgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccgaacca 32520780  T
Q  199 agtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  32520779 agtgcggttttttgcggtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacaccc 32520701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 12680837 - 12680551
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||||||     |||||||||| || || ||||||||||||||||||||||||||||||||||||    
T  12680837 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattatttttaagttatgtaattgggctagtacatgtttaagtaatattc 12680738  T
Q  96 attattcatgcggtttggtttggtt-----cggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    || |||| |||||||||||||||||     |||||||||| |||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||    
T  12680737 atcattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccaaaccgcgcggttcattgcaaaagtcatccgaattcat 12680638  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    | ||| ||||||||||||||||| ||||| ||||| |||| |||  ||||||||||||||||||| |||||||||| || |||||||    
T  12680637 ctgaaccaagtgcggttttttgcggtttcagtttggattggtttgatttgcggtttttctattgaattggttcggttttgaacaccc 12680551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 2226645 - 2226360
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||||||     ||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  2226645 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattattcatgagctatgtaattgggctaatacatgtttaagtaatattc 2226546  T
Q  96 attattcatgcggtttggttt-----ggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    |||||||  ||||||||||||     |||||||||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  2226545 attattctggcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaactgaaccgcgcggttaagtgcaaaagtcatccgaattcat 2226446  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    ||||| ||||||||||||||||| |||||| |||||||| ||||  ||| || |||||||||||  || ||||||| || ||||||    
T  2226445 ccgaaccaagtgcggttttttgcggtttcgatttgaattaatttgatttacgatttttctattggatttgttcggttttgaacacc 2226360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 10174383 - 10174661
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa---agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcat 97  Q
    ||||| |||| || ||||||||||||||||| ||||||||||   | |||  ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  10174383 aattataatcgaacctgatggtgcaacaatgaaaaaatcgaatcaaaagag-attcttgagttatgtaattgggatagtacatgtttaagtaatattcat 10174481  T
Q  98 tattc-atgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaat 196  Q
    | | |  |  |||||||||||||||||||||||| |||||||||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||||    
T  10174482 tttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaatcgaa-caaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaat 10174580  T
Q  197 caagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||||||||  ||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  10174581 caagtgcggttttttgtggtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacaccc 10174661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 36 - 277
Target Start/End: Complemental strand, 36176611 - 36176365
Alignment:
Q  36 aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttg-----gttcggttgctga 130  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||     |||||||||||||    
T  36176611 aatcaaaagagatttttcttgagctatgtaattgggctagtacacgtttaagtaatagtcattattcttgcggtttggtttgatttggttcggttgctga 36176512  T
Q  131 aatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattg 230  Q
     |||||||||||||||| | ||||||| ||||||| |||||||||||||||||||||||| |||| |||||||| |||||||| |||||| |||| ||||    
T  36176511 gatgcaaaccgcaaaccaacccgaaccatgcggtttagtgcaaaagtcatccgaattcattcgaaccaagtgcgattttttgcggtttcgatttggattg 36176412  T
Q  231 atttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     |||||||| |||||||||||||| ||||||||||| || |||||||    
T  36176411 gtttagtttacggtttttctattgggttggttcggttttgaacaccc 36176365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 46 - 254
Target Start/End: Complemental strand, 36176832 - 36176619
Alignment:
Q  46 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttg-----gttcggttgctgaaatgcaaacc 140  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||     ||||||||||||| |||||||||    
T  36176832 gatttttcttgagctatgtaattgggctagtacacgtttaagtaatagtcattattcttgcggtttggtttgatttggttcggttgctgagatgcaaacc 36176733  T
Q  141 gcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttg 240  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| |||| ||| |||||    
T  36176732 gcaaaccaacccgaaccatgcggtttagtgcaaaagtcatccgaattcattcgaaccaagtgcggttttttgcggtttcggtttggattggtttggtttg 36176633  T
Q  241 cggtttttctattg 254  Q
    ||||||||||||||    
T  36176632 cggtttttctattg 36176619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 16 - 277
Target Start/End: Original strand, 9161318 - 9161588
Alignment:
Q  16 tgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtt 110  Q
    |||||||||||||||||||||||||||     ||||||||||  ||||||||||  |||||||||| ||| ||||||||||||||||||||| |||||||    
T  9161318 tgatggtgcaacaatggaaaaatcgaatcaaaagagattatttctgagctatgt--ttgggctagtgcatatttaagtaatattcattattcttgcggtt 9161415  T
Q  111 -----tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcgg 205  Q
         |||||||||||||||||||| || ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||| |||    
T  9161416 gggtttggtttggttcggttgctgagattcaaaccgcaaaccgaaccgaaccgcacggttcagtgcaaaagtcatctgaattcatccgaaccaagtacgg 9161515  T
Q  206 -ttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     |||||||| ||||| ||||| |||| ||| |||||| |||||||||||| ||||||||| | || |||||||    
T  9161516 tttttttgcggtttcagtttggattggtttggtttgcagtttttctattgggttggttcgattttgaacaccc 9161588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 333045 - 332766
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctat--gtaattgggctagtacatgtttaagtaatat 93  Q
    |||||||||| ||  |||||||||||  ||||||||||||||     | ||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  333045 aattagaatcgaacttgatggtgcaattatggaaaaatcgaatcaaaatagattattcttgagctatatgtaattgggccagtacatgtttaagtaatat 332946  T
Q  94 tcattattcatgcggttt-----ggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattc 188  Q
    ||||||||| ||||||||     |||||||||||| |||||| |||||||||||||||| |||||||| | |||||||||||||||||          ||    
T  332945 tcattattcttgcggtttagtttggtttggttcggatgctgagatgcaaaccgcaaaccaaaccgaactgcgcggttcagtgcaaaag----------tc 332856  T
Q  189 atccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
     |||||| ||||||||||||||| |  |||||||||||||||||||||||| || ||||||||||| ||||||||||| || ||||||||    
T  332855 gtccgaaccaagtgcggttttttacgatttcggtttgaattgatttagtttacgatttttctattgggttggttcggttttgaacaccct 332766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 38434006 - 38434292
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  |||||||||||||||||||||||||||     |||||||||||||  |||||||||||||||||||||| ||||||||||||||     
T  38434006 aattagaatcgaacgtgatggtgcaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatattt 38434105  T
Q  96 attattcatgcggtt-----tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
     |||||| |||||||     |||||||||||||||||||| || ||||||||||| | |||||||||   |||||||||||||||||||||| |||||||    
T  38434106 cttattcttgcggtttggtttggtttggttcggttgctgagatacaaaccgcaaatcaaaccgaacctcacggttcagtgcaaaagtcatccaaattcat 38434205  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |  || |||||||| |||||||| |||||| |||| |||  ||| |||| || ||||||| |||||||| || ||| || |||||||    
T  38434206 ctaaaccaagtgcgattttttgcggtttcgatttggattagtttggtttacgatttttctgttgagttgatttggttttgaacaccc 38434292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 36103373 - 36103162
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaaaga-----gattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  |||||||||||||||||||||||||||  |     |||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  36103373 aattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcaaaaacgattattcttgagctatgtagttgggctagtacatgttcaagtaatattc 36103274  T
Q  96 attattcatgcggtttggtttggtt-----cggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||||||||||||     |||||||||| ||||||||  |||||| || ||||||| |||||||||||||||||||||| ||||||||    
T  36103273 attattcttgcggtttggtttggtttggttcggttgctgagatgcaaactacaaaccaaaacgaaccgcgcggttcagtgcaaaagtcatctgaattcat 36103174  T
Q  191 ccgaatcaagtg 202  Q
    ||||| ||||||    
T  36103173 ccgaaccaagtg 36103162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 701580 - 701750
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||  ||||||||||| || ||||||||| ||||||||||    
T  701580 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggtttagtctaaaagtcatccaaactcatccgaaccaagtgcggt 701679  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  701680 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 701750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 666978 - 666808
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  666978 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 666879  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||| |||||  ||| ||  |||||||||||||||||||  |||||||||| || |||||||    
T  666878 tttttgcggtttcagtttgggttggttcggtttgcggtttttctattggattggttcggttttgaacaccc 666808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 8409349 - 8409519
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||  |||||||||||||| ||||||||| ||||||||||    
T  8409349 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcgattcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 8409448  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  |||||||||||||||||||  |||||||||| || |||||||    
T  8409449 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattggattggttcggttttgaacaccc 8409519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 11917818 - 11917988
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||  |||||||||||||| |||||| || ||||||||||    
T  11917818 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggtttagtctaaaagtcatccgaactcatccaaaccaagtgcggt 11917917  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||   |||||||||||||||||| ||||||||||| || |||||||    
T  11917918 tttttgcggtttcggtttggattggttcgatttgcggtttttctattgggttggttcggttttgaacaccc 11917988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 38334461 - 38334291
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  38334461 ggtttagtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 38334362  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||| ||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  38334361 tttttgcggtttcgatttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 38334291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 30265554 - 30265288
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaaa-gaga---ttattcttgagctatgtaattgggctagtacatgtttaagtaatattca 96  Q
    |||||||||| ||  |||||||||||||||||||||||||||  || |   ||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  30265554 aattagaatcgaacttgatggtgcaacaatggaaaaatcgaattgaaagcgttatttttgagctatgtaattgggctagcacatgattaagtaatattca 30265455  T
Q  97 ttattcatgcggtttggtttg-----gttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatc 191  Q
    |||||| |||| |||||||||     ||||||||||||| |||||||||||||||||||||| ||     |||| ||||||||||||||| |||||||||    
T  30265454 ttattcttgcgatttggtttgatttggttcggttgctgagatgcaaaccgcaaaccgaaccgtac-----ggtttagtgcaaaagtcatctgaattcatc 30265360  T
Q  192 cgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttc 263  Q
    ||||||||||||| |||||| |  ||||| ||| ||||| ||| |||| | |||||| || || ||||||||    
T  30265359 cgaatcaagtgcgattttttacgatttcgatttaaattggtttggtttacagtttttttaatgggttggttc 30265288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 16 - 277
Target Start/End: Complemental strand, 17084622 - 17084362
Alignment:
Q  16 tgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtt 110  Q
    ||||||||||| |||||||||||||||     | |||||||| |||   |||||||||||| ||||||| |||||||||||||| ||||||| |||||||    
T  17084622 tgatggtgcaataatggaaaaatcgaatcaaaatagattatttttggattatgtaattgggttagtacaagtttaagtaatattgattattcttgcggtt 17084523  T
Q  111 tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttt 210  Q
    |||||     |||||||||| |||||||| | ||| |||||||||  | |||||||| ||||| ||||||| ||||||||||||||||||||| ||||||    
T  17084522 tggtt-----cggttgctgagatgcaaactggaaatcgaaccgaat-gcgcggttcaatgcaacagtcatctgaattcatccgaatcaagtgcagttttt 17084429  T
Q  211 tgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||| |||| | ||||||||| |||  |||||||||||| ||||| |||||||| || ||||||||||    
T  17084428 tgcggttttgatttgaattggtttgatttgcggtttttttattgggttggttcagttttaaacaccc 17084362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 30002361 - 30002531
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||  |||| ||||||||| ||||||||| ||||||||||    
T  30002361 ggtttggtttggttcggttgctgagatgtaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaaatcatccgaactcatccgaaccaagtgcggt 30002460  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||| |||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  30002461 tttttgcggtttcagtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 30002531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 15068839 - 15069009
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  15068839 ggtttggtttggtttggttgttgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 15068938  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||| ||||  ||| ||  ||||||||||||||||||| ||||||| ||| || |||||||    
T  15068939 tttttgcggtttcgatttgggttggttcggtttgcggtttttctattgggttggtttggttttgaacaccc 15069009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 27885793 - 27885675
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  27885793 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 27885694  T
Q  207 tttttgcagtttcggtttg 225  Q
    ||||||| |||||||||||    
T  27885693 tttttgcggtttcggtttg 27885675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 111 - 277
Target Start/End: Original strand, 42545822 - 42545988
Alignment:
Q  111 tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttt 210  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| |||||||  |||||    
T  42545822 tggtttggttcggttgttgagatgcaaaccgcaaaccgaaccgaaccgcgcggtttagtgcaaaagtcatctgaattcatccgaaccaagtgcaattttt 42545921  T
Q  211 tgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||| |||||| |||| |||| ||| |||| |||||||| ||||| |||||||| || || |||||||    
T  42545922 tgcggtttcgatttggattggtttggtttacggtttttttattgggttggttcagttttgaacaccc 42545988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 23781175 - 23781311
Alignment:
Q  141 gcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttag-ttt 239  Q
    |||||||||||||||||| || ||||||||||||||||||| ||| ||||||||  ||||||||||||||||| ||||||||||| |||| ||| | |||    
T  23781175 gcaaaccgaaccgaaccgcgcagttcagtgcaaaagtcatctgaaatcatccgatccaagtgcggttttttgcggtttcggtttggattggtttggtttt 23781274  T
Q  240 gcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||| |||| ||||||||||||| ||| || |||||||    
T  23781275 gcgggtttt-tattgagttggtttggttttgaacaccc 23781311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 23868128 - 23868264
Alignment:
Q  141 gcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttag-ttt 239  Q
    |||||||||||||||||| || ||||||||||||||||||| ||| ||||||||  ||||||||||||||||| ||||||||||| |||| ||| | |||    
T  23868128 gcaaaccgaaccgaaccgcgcagttcagtgcaaaagtcatctgaaatcatccgatccaagtgcggttttttgcggtttcggtttggattggtttggtttt 23868227  T
Q  240 gcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||| |||| ||||||||||||| ||| || |||||||    
T  23868228 gcgggtttt-tattgagttggtttggttttgaacaccc 23868264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 112 - 276
Target Start/End: Original strand, 35359464 - 35359623
Alignment:
Q  112 ggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttttt 211  Q
    ||||||||| ||||  ||| |||||||||||||| ||||||| || ||     ||||||||||| ||||||||||||||||| | |||||||||||||||    
T  35359464 ggtttggtttggtttttgagatgcaaaccgcaaatcgaaccgcactgt-----tcagtgcaaaaatcatccgaattcatccgcaccaagtgcggtttttt 35359558  T
Q  212 gcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    || |||||| ||||||||  |||||||| || ||| ||||||| ||||||||| | |||||||||    
T  35359559 gcggtttcgatttgaattagtttagtttacgatttatctattgggttggttcgattttaaacacc 35359623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 35893485 - 35893622
Alignment:
Q  141 gcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttg 240  Q
    ||||| ||||||| |||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||  |||     
T  35893485 gcaaatcgaaccggaccgcgcgattcagtacaaaagtcatccgaattcatccgaaccaagtgcggttttttgcggtttcgatttgaattggtttgattta 35893584  T
Q  241 cgg-tttttctattgagttggttcggtattaaacaccc 277  Q
    ||| ||||| |||||  |||||| ||| ||||||||||    
T  35893585 cggttttttttattggattggtttggttttaaacaccc 35893622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 35893346 - 35893405
Alignment:
Q  35 aaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatatt 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35893346 aaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatatt 35893405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 110 - 277
Target Start/End: Original strand, 36568185 - 36568352
Alignment:
Q  110 ttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttt 209  Q
    ||||||||||||||||| | ||||  ||||||||||| ||||| |||| || |||| |||  |||| | ||| |||| |||| ||| ||| |||||||||    
T  36568185 ttggtttggttcggttggtaaaatcaaaaccgcaaactgaaccaaaccatgtggttgagttaaaaattgatctgaatacatctgaaccaaatgcggtttt 36568284  T
Q  210 ttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||||||||| |||| |||  |||  ||||||| |||||| |||||||||| || |||||||    
T  36568285 ttgcagtttcggtttggattggtttgatttctggtttttatattgaattggttcggttttgaacaccc 36568352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 109 - 276
Target Start/End: Original strand, 41455351 - 41455518
Alignment:
Q  109 tttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttt 208  Q
    |||||||||||||||||| | ||||   ||||||||| |||||| |||| || |||| |||  |||| | ||| |||| |||||||| ||| |||| |||    
T  41455351 tttggtttggttcggttggtaaaatcataaccgcaaatcgaaccaaaccatgtggttgagtaaaaaattgatcagaatacatccgaaccaaatgcgattt 41455450  T
Q  209 tttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    ||||||||||||||||| |||| || || ||||||||||||||||   |||||||||| || ||||||    
T  41455451 tttgcagtttcggtttggattggttcaggttgcggtttttctatttgattggttcggttttgaacacc 41455518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 154 - 277
Target Start/End: Original strand, 42119338 - 42119461
Alignment:
Q  154 aaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctatt 253  Q
    |||| ||||||| |||  |||| | |||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||  |||||| |||||||||||    
T  42119338 aaccatgcggttgagtaaaaaattgatccgaatacatccgaatcaaatgcgattttttgcagtttcggtttgaattggttcggtttgcagtttttctatt 42119437  T
Q  254 gagttggttcggtattaaacaccc 277  Q
    |  ||| |||||| || |||||||    
T  42119438 ggattgtttcggttttgaacaccc 42119461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 266
Target Start/End: Original strand, 23623478 - 23623637
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||  | ||||| |||||||||||| |||| |||| ||||||| |||  |||||| |||||||| | ||| ||  || ||||||    
T  23623478 ggtttggtttggttcggtttgtcaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatacttccaaactaaatgcggt 23623577  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    |||||   | || |||||| |||| ||  |||||||||||||||||||  ||||||||||    
T  23623578 tttttatggctttggtttggattggttctgtttgcggtttttctattggattggttcggt 23623637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 2423276 - 2423449
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||||||||| | ||||| |||||||||| | |||| |||| || |||| || | |||||| |||  ||| ||||| ||  || |||    
T  2423276 tgcggtttggtttggttcggttggtaaaatgaaaaccgcaaatcaaaccaaaccatgtggttgagggaaaaagtgatcaaaatacatccaaacaaaatgc 2423375  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||  |||||| ||||  |||||| |||||||  |||||||||||  |||||||| | || |||||||    
T  2423376 ggttttttgtggtttcgatttgggttgattcagtttgcaatttttctattggattggttcgcttttgaacaccc 2423449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 14653020 - 14653077
Alignment:
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcg 264  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  14653020 tttttgcggtttcggtttggattgatttggtttgcggtttttctattgagttggttcg 14653077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 42545025 - 42545082
Alignment:
Q  45 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattc 102  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  42545025 agattattcttgagctatgttattgggctattacatatttaagtaatattcattattc 42545082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 169 - 275
Target Start/End: Complemental strand, 9988520 - 9988414
Alignment:
Q  169 tgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtat 268  Q
    |||||||||||||| |||||||||||| ||| |||  |||||| |  ||||||||| ||||| ||| |||| | ||||||||||||  |||||||||| |    
T  9988520 tgcaaaagtcatccaaattcatccgaaccaaatgcaattttttacgatttcggtttaaattggtttggtttacagtttttctattggattggttcggttt 9988421  T
Q  269 taaacac 275  Q
    | |||||    
T  9988420 tgaacac 9988414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 28224470 - 28224345
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtt 207  Q
    ||||||||||||||||||| | ||||  |||||||||||| |||| |||  ||| ||| |||  |||| | |||||||| |||| ||| ||| | | |||    
T  28224470 gtttggtttggttcggttggtaaaatcaaaaccgcaaaccaaaccaaactatgcagttgagtaaaaaaatgatccgaatacatctgaaccaaatacagtt 28224371  T
Q  208 ttttgcagtttcggtttgaattgatt 233  Q
    |||||||||||  |||||||||||||    
T  28224370 ttttgcagttttagtttgaattgatt 28224345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 691217 - 691099
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||| |||||||||| | |||| |||| ||||||| ||    ||| | |||| | | |||||||||||| || | |    
T  691217 ggtttggtttggttcggttggtaaaatgaaaaccgcaaatcaaaccaaaccatgcggttgagcaagaaaatgatccaattacatccgaatcaaatgtgat 691118  T
Q  207 tttttgcagtttcggtttg 225  Q
    ||||||| |||||||||||    
T  691117 tttttgcggtttcggtttg 691099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 33793108 - 33793268
Alignment:
Q  113 gtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttg 212  Q
    |||||||| ||||| | ||||  |||||||||||| || | ||||   ||||| |||  |||| | ||| |||| |||||||| ||| ||||||||||||    
T  33793108 gtttggtttggttgataaaatcaaaaccgcaaaccaaatcaaaccacacggttgagtaaaaaaatgatctgaatacatccgaaccaaatgcggttttttg 33793207  T
Q  213 cagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaac 273  Q
    |  ||||||||||||||| ||   ||||| |||||||| |||  ||||||| || ||||||    
T  33793208 cgatttcggtttgaattggttcgatttgcagtttttcttttggattggttcagttttaaac 33793268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 11403172 - 11403215
Alignment:
Q  232 tttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||    
T  11403172 tttagtttgcggtttttctatttggttggttcggttttaaacac 11403215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23781049 - 23781124
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattggg 71  Q
    |||||||||| || | |||||| |||||||||||||||| ||     ||||||||||||||||||| |||||||||    
T  23781049 aattagaatcgaacccgatggtacaacaatggaaaaatcaaatcaaaagagattattcttgagctaagtaattggg 23781124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23868002 - 23868077
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattggg 71  Q
    |||||||||| || | |||||| |||||||||||||||| ||     ||||||||||||||||||| |||||||||    
T  23868002 aattagaatcgaacccgatggtacaacaatggaaaaatcaaatcaaaagagattattcttgagctaagtaattggg 23868077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 18432565 - 18432683
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||| ||||||||||||| | ||||  |||||||||||| |||| |||  ||||||| | | ||||| | || | ||| ||||| |||||| ||||||    
T  18432565 ggtttgatttggttcggttgataaaataaaaaccgcaaaccaaaccaaactatgcggttgaatacaaaaataattcaaatacatccaaatcaaatgcggt 18432664  T
Q  207 tttttgcagtttcggtttg 225  Q
    || ||||  ||||||||||    
T  18432665 ttcttgcgatttcggtttg 18432683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 40331020 - 40330922
Alignment:
Q  179 atccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||| ||| ||||||||| || | |||||||| || |||||||||||  ||| ||  ||||||||| ||||||||| |||| |||||| || |||||||    
T  40331020 atccaaatacatccgaattaaatacggtttttcgcggtttcggtttgtgttggttcggtttgcggtatttctattgggttgattcggttttgaacaccc 40330922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 6595400 - 6595453
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaacc 157  Q
    ||||||||||||||||| ||||| | ||||| |||||||||||| |||| ||||    
T  6595400 tgcggtttggtttggtttggttggtaaaatgaaaaccgcaaaccaaaccaaacc 6595453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 9988593 - 9988538
Alignment:
Q  67 ttgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggttcggtt 125  Q
    ||||||||||||| |||||| ||||||| |||||   ||||||||||||||||| ||||    
T  9988593 ttgggctagtacaagtttaaataatattgattat---tgcggtttggtttggtttggtt 9988538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 39730813 - 39730889
Alignment:
Q  201 tgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||||||  ||||||||||||||| ||   |||| | ||||||||||  ||||||||||| || |||||||    
T  39730813 tgcggttttttgcgatttcggtttgaattggttcgatttgtgatttttctatttggttggttcggttttgaacaccc 39730889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 4e-89; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 35039700 - 35039414
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||  ||| |||||||||||||||||||||||||||     |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  35039700 aattagaattgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattattcttgggctatgtaattgggctagtacatgtttaagtaacattc 35039601  T
Q  96 attattcatgcggtttggtttggttcggtt-----gctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||||||||||||||||| ||||     | ||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  35039600 attattcttgcggtttggtttggtttggtttggttgttgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagcgcaaaagtcatccgaattcat 35039501  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| |||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  35039500 ccgaaccaagtgcggttttttgcagttttggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacaccc 35039414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 13801739 - 13801458
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || |||||||||||||||||||||||| |||     |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13801739 aattagaatcgaacctgatggtgcaacaatggaaaaattgaatcaaaagagattattcttgagctatgtaattgggctagtacatatttaagtaatattc 13801640  T
Q  96 attattcatgcggtttggtttggttcggtt-----gctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||||||||||||||||| ||||     | ||| |||||||||||||||||||||      ||||||||| | ||||||||||||||||||||    
T  13801639 attattcttgcggtttggtttggtttggttcagttgatgagatgcaaaccgcaaaccgaacca-----tgcggttcaatacaaaagtcatccgaattcat 13801545  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| |||||||||||||||   |||||| |||| |||| ||| ||||||||||||||||||| || |||||||| || |||||||    
T  13801544 ccgaaccaagtgcggttttttatggtttcgatttggattggtttggtttgcggtttttctattgggtgggttcggttttgaacaccc 13801458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 36 - 263
Target Start/End: Original strand, 25137505 - 25137736
Alignment:
Q  36 aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttg-----gtttggttcggttgctga 130  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||  || ||||||     |||||||||||||| |||    
T  25137505 aatcaaaagagattattcttgggctatgtaattgggatagtacatgtttaagtaatattcattattattgtggtttggttcagtttggttcggttgatga 25137604  T
Q  131 aatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattg 230  Q
     ||||| ||||| |||| |||| ||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||    
T  25137605 gatgcataccgc-aaccaaaccaaaccgcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtggggttttttgcggtttcggtttggattg 25137703  T
Q  231 atttagtttgcggtttttctattgagttggttc 263  Q
     ||| ||||||||||||||| ||| ||||||||    
T  25137704 gtttggtttgcggtttttctgttgggttggttc 25137736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 33550644 - 33550830
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||||||     |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33550644 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattattcttgggctatgtaattgggctagtacatgtttaagtaatattc 33550743  T
Q  96 attattcatgcggtttggttt-----ggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagt 177  Q
    ||||||| |||||||||||||     |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  33550744 attattcttgcggtttggtttggttcggttcggttgctgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagtgcaaaagt 33550830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 10591159 - 10591430
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || |||||||| |||||||| ||||||||||     ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10591159 aattagaatcgaacctgatggtacaacaatgaaaaaatcgaatcgaaagacattattcttgagctatgtaattgggctattacatgtttaagtaatattc 10591258  T
Q  96 attattcatgcg-----gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||||     |||||||||||||| |||| ||| | ||||||||||||||||| ||||||| |||||||||||||||||||||||||| |       
T  10591259 attattcttgcggttcagtttggtttggttctgttgttgagacgcaaaccgcaaaccgaatcgaaccgcgcggttcagtgcaaaagtcatccgaact--- 10591355  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaa 272  Q
           ||||||||||||||||||||||| || | |||| ||| ||||||||||||| ||||| |||||||| || |||||    
T  10591356 -------aagtgcggttttttgcagtttcgattcggattggtttggtttgcggtttttttattgggttggttctgttttaaa 10591430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 12270919 - 12271089
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  12270919 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 12271018  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||| | || |||||||    
T  12271019 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggttcgattttgaacaccc 12271089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 5866728 - 5866558
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  ||||| |||||||| ||||||||| |||||||| |    
T  5866728 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagacatccgaactcatccgaaccaagtgcgat 5866629  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  5866628 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 5866558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 15860049 - 15860242
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaa----atcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattca 96  Q
    ||||||||||  | ||||||||||||||||||||||    ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15860049 aattagaatcggaactgatggtgcaacaatggaaaatctaatcaaaagagattattcttgagctatgtaattgggctagtacatgtttaattaatattca 15860148  T
Q  97 ttattcatgc-----ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaa 185  Q
    |||||| |||     |||||||||||||||||||| |||  ||||||| ||||||| || |||||||  |||||||||| ||||||||||||||    
T  15860149 ttattcttgcagtttggtttggtttggttcggttggtgaggtgcaaactgcaaaccaaatcgaaccgcacggttcagtgtaaaagtcatccgaa 15860242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 10390686 - 10390539
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||| ||||||||||    
T  10390686 ggtttggtttggttcggttgctgagatgcaaaccgcaaatcgaaccgaaccgcgcggttcagtgcaaaagtcatttgaattcatccgaaccaagtgcggt 10390587  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    ||||||| ||||||||||| |||| |||  ||||| |||||| |||||    
T  10390586 tttttgcggtttcggtttggattggtttgatttgcagtttttttattg 10390539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 10494037 - 10493867
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||||||  |||||||| |||||||| |||||||||| |||||    |||||||||||||||||||| | |||| ||||||| ||||||||      
T  10494037 ggtttggtttggtttagttgctgagatgcaaactgcaaaccgaatcgaactacacggttcagtgcaaaagtcattcaaatttatccgaaccaagtgcgag 10493938  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||  |||||||||| |||||||||||| ||| ||||| | || |||||||    
T  10493937 tttttgctgtttcggtttggatttgtttagtttgcagtttttctattgggttagttcgattttgaacaccc 10493867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 33550849 - 33550911
Alignment:
Q  215 gtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| ||| || |||||||    
T  33550849 gtttcggtttggattgatttggtttgcggtttttctattgagttggtttggttttgaacaccc 33550911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 277
Target Start/End: Complemental strand, 7169692 - 7169528
Alignment:
Q  113 gtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccg-tgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttttt 211  Q
    |||||||||||||| | ||||  |||| |||||||||||| ||||  ||||||| | |  |||| | |||||||| |||||||| ||| |||||||||||    
T  7169692 gtttggttcggttggtaaaatcaaaactgcaaaccgaaccaaaccaatgcggttgattaaaaaaatgatccgaatacatccgaaccaattgcggtttttt 7169593  T
Q  212 gcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||  |||| |||||||||| ||  ||||||||||||||| |||  |||||||  | ||||||||||    
T  7169592 gcgatttc-gtttgaattggttcggtttgcggtttttcttttggattggttctattttaaacaccc 7169528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 266
Target Start/End: Original strand, 22414281 - 22414435
Alignment:
Q  112 ggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttttt 211  Q
    ||||||||||||||  | ||||| ||||| |||| |||||| |||| ||| ||| |||  |||  | |||| ||| |||||||| ||| |||||||||||    
T  22414281 ggtttggttcggttcgtaaaatgaaaaccacaaatcgaaccaaaccatgcagttgagtaaaaagtttatccaaatacatccgaaccaaatgcggtttttt 22414380  T
Q  212 gcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    || ||||| ||||| |||| ||  ||||||| ||||||| |||  ||||||||||    
T  22414381 gcggtttccgtttggattggttcggtttgcgatttttcttttggattggttcggt 22414435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 11417516 - 11417628
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtt 207  Q
    |||||||||| |||| ||| | ||||  |||||||||||| |||| || | |||||||  ||  |||| |  ||||||| |||||||||||||||| |||    
T  11417516 gtttggtttgattcgattggtaaaatcaaaaccgcaaaccaaaccaaatcatgcggttgggtaaaaaaattgtccgaatacatccgaatcaagtgccgtt 11417615  T
Q  208 ttttgcagtttcg 220  Q
    |||||||||||||    
T  11417616 ttttgcagtttcg 11417628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 12108192 - 12108050
Alignment:
Q  112 ggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttttt 211  Q
    ||||||||| ||||| | ||||| |||||||||||| || | |||| |  |||| || | |||||| |||||||| | ||| |||||| || ||||||||    
T  12108192 ggtttggtttggttgataaaatgaaaaccgcaaaccaaatcaaaccataaggttgagggaaaaagtgatccgaatacttccaaatcaaatgtggtttttt 12108093  T
Q  212 gcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    || |||||  ||||  ||| ||  |||||||||||||||||||    
T  12108092 gcggtttcaatttgggttggttcggtttgcggtttttctattg 12108050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 13531887 - 13531766
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||| ||||| | ||||| ||| |||||||| |||| |||| ||||||| ||    ||| | ||| || | |||||||| ||| | |    
T  13531887 tgcggtttggtttggtttggttggtaaaatgaaaatcgcaaaccaaaccaaaccatgcggttgagcaagaaaatgatctgattacatccgaaacaaatac 13531788  T
Q  204 ggttttttgcagtttcggtttg 225  Q
    |||| |||||||||||||||||    
T  13531787 ggttatttgcagtttcggtttg 13531766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 9686520 - 9686616
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcg 204  Q
    ||||||||||||||||||| | ||||  ||||||||| ||||| | |||| ||||||| |||  |||| | || ||||| |||||||||||| ||||    
T  9686520 gtttggtttggttcggttggtaaaatcaaaaccgcaatccgaatcaaaccatgcggttgagtaaaaaaatgattcgaatacatccgaatcaaatgcg 9686616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 4577586 - 4577700
Alignment:
Q  136 aaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgattta 235  Q
    |||| |||||||||||| |||| ||||||| |||  |||||| |||||||||||||| || ||| |||  |||||||| ||||  |||||| ||| ||      
T  4577586 aaactgcaaaccgaaccaaaccttgcggttaagtaaaaaagtgatccgaattcatccaaaccaaatgc-attttttgcggttttagtttgagttggttcg 4577684  T
Q  236 gtttgcggtttttcta 251  Q
    |||||| |||||||||    
T  4577685 gtttgcagtttttcta 4577700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10390788 - 10390709
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaa-----aatcgaaagagattattc-ttgagctatgtaattgggcta 74  Q
    ||||| |||| ||||||||||||||||||||||||     |||||||| ||||||||| |||||||| |||||| |||||    
T  10390788 aattaaaatcgaatctgatggtgcaacaatggaaaaattgaatcgaaaaagattattctttgagctacgtaatttggcta 10390709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 17306833 - 17306936
Alignment:
Q  109 tttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttt 208  Q
    |||||||||||||||||||| ||||  |||||| ||| |||| | |||| ||| | | |||| |||||| || ||||| ||||| |||||| |||| |||    
T  17306833 tttggtttggttcggttgctaaaataaaaaccgtaaaacgaagcaaaccatgcagctaagtgaaaaagtgattcgaatacatccaaatcaaatgcgtttt 17306932  T
Q  209 tttg 212  Q
    ||||    
T  17306933 tttg 17306936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 13092487 - 13092581
Alignment:
Q  183 gaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||| |||||||| ||| ||||  ||||| | |||||| ||||||||||||| ||||| |||| ||||||||  || ||| ||| ||||||||||    
T  13092487 gaatacatccgaaccaaatgcgactttttacggtttcgatttgaattgatttggtttgtggttattctattggatttgtttggttttaaacaccc 13092581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 15860252 - 15860313
Alignment:
Q  215 gtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||| |||| ||| |||||||| |||||||||| ||||||||||| || |||||||    
T  15860252 gtttcggtttggattggtttggtttgcgg-ttttctattgggttggttcggttttgaacaccc 15860313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 19134719 - 19134666
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaacc 157  Q
    ||||||||||||||||||||||| | ||||| |||| ||||||| |||| ||||    
T  19134719 tgcggtttggtttggttcggttggtaaaatgaaaactgcaaaccaaaccaaacc 19134666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 23764855 - 23764766
Alignment:
Q  188 catccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||| ||||||| ||| ||||||||| |||| ||||||  ||| ||  |||||| ||||||||||||  |||||||||| || |||||||    
T  23764855 catcggaatcaaatgcagttttttgcggttttggtttgggttggttcggtttgcagtttttctattgtattggttcggttttgaacaccc 23764766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 24641130 - 24641033
Alignment:
Q  179 atccgaattcatccgaatcaagtgcggttttttgcag-tttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    |||||||| |||||||||||| || ||||||||   | ||| |||||| |||| ||   ||||||||||||||||||  |||||||||| ||||||||    
T  24641130 atccgaatacatccgaatcaaatgtggtttttttgtgattttggtttggattggttcgatttgcggtttttctattggattggttcggttttaaacac 24641033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 8478713 - 8478760
Alignment:
Q  216 tttcggtttgaattgatttagtttgcggtttttctattgagttggttcg 264  Q
    ||||||||||||| ||||||||||||  ||||| |||||||||||||||    
T  8478713 tttcggtttgaatggatttagtttgc-atttttttattgagttggttcg 8478760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 159; Significance: 2e-84; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 69297 - 69011
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||| |||||||||||||||||||||||||||     |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  69297 aattagaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattattattgggctatgtaattaggctagtacatgtttaagtaatattc 69198  T
Q  96 attattcatgcgg-----tttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||     |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  69197 attattcttgcgggttgttttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcat 69098  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    || || ||| ||| ||||||||| |||| |||||| |||||||| ||||  ||||||||||||| ||||||||||| ||||||||||    
T  69097 ccaaaccaaatgctgttttttgcggtttaggtttggattgatttggtttttggtttttctattgggttggttcggttttaaacaccc 69011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 5 - 277
Target Start/End: Complemental strand, 77399 - 77117
Alignment:
Q  5 agaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcatta 99  Q
    |||||| ||| |||||||||||||||||||||||||||     || ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  77399 agaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagtgattattattgggctatgtaattaggctagtacatgtttaagtaatattcatta 77300  T
Q  100 ttcatgcgg-----tttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccga 194  Q
    ||| |||||     |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||| |    
T  77299 ttcttgcgggttgttttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccaa 77200  T
Q  195 atcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    | ||| ||| ||||||||| |||| |||||| |||||||| ||||  ||||||||||||| ||||||||||| ||||||||||    
T  77199 accaaatgctgttttttgcggtttaggtttggattgatttggtttttggtttttctattgggttggttcggttttaaacaccc 77117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 2e-84; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 6004155 - 6003869
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||  || ||||||||||||||||||||||||||||     |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  6004155 aattagaattgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattattcttgggctatgtaattgggctagtacatgtttaagtaacattc 6004056  T
Q  96 attattcatgcggtttggtttggttcggtt-----gctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||||||||||||||||| ||||     ||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  6004055 attattcttgcggtttggtttggtttggttcggtagctgagatgcaaaccgcaaaccgaaccaaacctcgcggttcagtgcaaaagtcatccgaattcat 6003956  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| |||||| |||||||||| |||| |||||| |||| |||  |||||||||||||||||| ||||||||||| || |||||||    
T  6003955 ccgaaccaagtgtggttttttgctgttttggtttggattggtttgatttgcggtttttctattgggttggttcggttttgaacaccc 6003869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 35531919 - 35531653
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaaaga-----gattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  |||||||||||||||||||||||||||  |     |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35531919 aattagaatcgaacatgatggtgcaacaatggaaaaatcgaataaaaaacgattattcttgagctatgcaattgggctagtacatgtttaagtaatattc 35531820  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  35531819 attattcttgcggtttggtttggttcggttgctgagatgcaaactgcaaatcgaactgaaccgtgcggttcagtgcaaaagtcacctgaattcatccgaa 35531720  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggtt 262  Q
     |||||||  |||||||| |||||||||| ||||| |||  |||| |||||||||||||||||||||    
T  35531719 ccaagtgcaattttttgcggtttcggtttaaattggtttgatttgtggtttttctattgagttggtt 35531653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 21586608 - 21586328
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || || |||||||||||||||||||||||||     ||| ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  21586608 aattagaatcgaacctcatggtgcaacaatggaaaaatcgaatcgaaagatattattcttgaactatgtaatttggctagtacatgtttaagtaatattc 21586509  T
Q  96 attattcatgcggtttggtt----tggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatc 191  Q
    ||||||| |||| |||||||    ||||||||||||||| |||||||| |||||||||||||      |||||| |||||||||||||||| ||||||||    
T  21586508 attattcttgcgatttggttggtttggttcggttgctgagatgcaaactgcaaaccgaaccgc-----gcggtttagtgcaaaagtcatccaaattcatc 21586414  T
Q  192 cgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||| ||||||| ||||||||||||||| ||||| |||| ||| ||||||||||||| ||||| ||||||||||| || |||||||    
T  21586413 cgaaccaagtgcagttttttgcagtttcagtttggattggtttggtttgcggtttttttattgggttggttcggttttgaacaccc 21586328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 63 - 276
Target Start/End: Complemental strand, 48032836 - 48032618
Alignment:
Q  63 gtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggttcggtt-----gctgaaatgcaaaccgcaaaccgaaccgaacc 157  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||     ||||| |||||||||||||||| |||||||||    
T  48032836 gtaattgggctagtacatgtttaagtaatattcatgattcttgcggtttggtttggtttggttcggctgctgagatgcaaaccgcaaaccaaaccgaacc 48032737  T
Q  158 gtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagt 257  Q
    | |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||  |||||| ||| |||| ||| ||||||||||||||||||| ||    
T  48032736 gcgcggttcattgcaaaagtcatccgaattcatctgaaccaagtgcggttttttgcgatttcgggttggattggtttggtttgcggtttttctattgggt 48032637  T
Q  258 tggttcggtattaaacacc 276  Q
    ||||||||| || ||||||    
T  48032636 tggttcggttttgaacacc 48032618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 32880627 - 32880816
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaat-----cgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||||||||||| ||||||||||||||||||||||||     ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  32880627 aattagaatcaaacctgatggtgcaacaatggaaaaatcaaatcgaaagagattaaacttgagctatgtaattggactagtacatgtttaagtaatattc 32880726  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaa 185  Q
    ||| ||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||||||||||    
T  32880727 atttttcttgcggtttggtttggttcggttgctgagatgcaaaccgtaaaccaaaccgaactgcgcggttcagtgcaaaagtcatccgaa 32880816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 10369624 - 10369794
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||    
T  10369624 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaattcatccgaaccaagtgcggt 10369723  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||| ||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  10369724 tttttgcggtttcgatttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 10369794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 51149378 - 51149208
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  51149378 ggtttggtttggttaggttgctgagatgcaaaccgtaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 51149279  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  51149278 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 51149208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 108 - 277
Target Start/End: Complemental strand, 4669302 - 4669133
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtt 207  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| |||||||||||    
T  4669302 gtttggtttggtttggttgctgagatgcaaatcgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggtt 4669203  T
Q  208 ttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||||||||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  4669202 ttttgcagtttcggtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 4669133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 35401880 - 35401710
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  35401880 ggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 35401781  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||| | || |||||||    
T  35401780 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggttcgattttgaacaccc 35401710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 50562343 - 50562077
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50562343 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 50562244  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| || ||||||||||      |||| ||| ||||||| |||||| ||||||||| ||  || ||||||| |||||          |||||||||    
T  50562243 attattcttggggtttggttt-----tgttgttgagatgcaaatcgcaaatcgaaccgaatcgcacgattcagtgtaaaag----------tcatccgaa 50562159  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     |||||||| |||||||||||||||||| |||||| ||| ||||| ||||||| ||||   |||||||||| || |||||||    
T  50562158 ccaagtgcgattttttgcagtttcggttcgaattggtttggtttgtggtttttttattagattggttcggttttgaacaccc 50562077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 33361326 - 33361496
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||  ||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  33361326 ggtttggttcggttcggttgctgagatgcaaaccgcaaactgaactaaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 33361425  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  33361426 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 33361496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 96 - 277
Target Start/End: Complemental strand, 27641879 - 27641698
Alignment:
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| |||||||||||||||||  || ||||| |||||||||||||||| || | ||||  |||||||||||||||||||||| |||||||||||||    
T  27641879 attattcttgcggtttggtttggtttagtggctgagatgcaaaccgcaaaccaaatcaaaccacgcggttcagtgcaaaagtcatctgaattcatccgaa 27641780  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||||||||||||||| |||||||  |||| |||| ||| ||||||||||||||||||  ||||| ||||| || |||||||    
T  27641779 ccaagtgcggttttttacagtttcaatttggattggtttggtttgcggtttttctattaggttggctcggttttgaacaccc 27641698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 39098259 - 39098516
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcga-----aagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||||||||||  ||||||||||||||||| |||||||||     || |||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  39098259 aattagaatcaatcctgatggtgcaacaatgaaaaaatcgattcaaaaaagattattcttgagctatttaattgtgttagtacatgtttaagtaatattc 39098358  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| |||          |||||||||||||| ||||||||| |||| ||||||| |     ||||||||||||||||          |||||||||    
T  39098359 attattcttgc----------ggttcggttgctgagatgcaaaccacaaatcgaaccgca-----cggttcagtgcaaaag----------tcatccgaa 39098433  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
     |||||||||||||||||  |||| ||||| ||||||||  |||||||||||||||||| |||||||| || |||||||||||    
T  39098434 ccaagtgcggttttttgcgctttcagtttggattgatttgatttgcggtttttctattgggttggttcagttttaaacaccct 39098516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 33002840 - 33002967
Alignment:
Q  3 ttagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcat 97  Q
    |||||||| || ||||||||||||||||||||||||||||     |||||||||| ||||||||||||||||| || |||||| |||||| |||||||||    
T  33002840 ttagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattattattgagctatgtaattggactggtacatatttaagaaatattcat 33002939  T
Q  98 tattcatgcggtttggtttggttcggtt 125  Q
    ||||| ||||||||||||| ||| ||||    
T  33002940 tattcttgcggtttggtttagtttggtt 33002967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 34794937 - 34795097
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||  |||||          ||||||||| ||||| ||||    
T  34794937 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaag----------tcatccgaaccaagtacggt 34795026  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||| ||| || |||||||    
T  34795027 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggtttggttttgaacaccc 34795097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 113 - 277
Target Start/End: Complemental strand, 17144344 - 17144180
Alignment:
Q  113 gtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttg 212  Q
    |||||||| ||||| | ||||  |||||||||||| |||| |||| |  |||| |||  |||||  |||||||| |||||||||||| ||||||||||||    
T  17144344 gtttggtttggttgataaaataaaaaccgcaaaccaaaccaaaccatatggttgagtaaaaaagggatccgaatacatccgaatcaaatgcggttttttg 17144245  T
Q  213 cagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    | |||||||||||  ||| || ||||| ||||||||||||||| |||||||||| || |||||||    
T  17144244 cggtttcggtttgggttggttcagtttacggtttttctattgaattggttcggttttgaacaccc 17144180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 278
Target Start/End: Complemental strand, 51661979 - 51661808
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||| |||||||||||| | |||   |||||||||||| |||| |||| ||||||| | |  |||||| |||||||| |||||||||||| ||||||    
T  51661979 ggtttgggttggttcggttggtaaaacaaaaaccgcaaaccaaaccaaaccatgcggttgaataaaaaagtgatccgaatacatccgaatcaaatgcggt 51661880  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
    ||||||  |||||||||||  ||||||  |||||||||||||  ||||  |||||||||| || ||||||||    
T  51661879 tttttgtggtttcggtttgggttgattcggtttgcggttttttcattggattggttcggttttgaacaccct 51661808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 55467244 - 55467074
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||  | ||||  |||| |||||||||||| |||| | ||||| |||  |||| | ||| |||| ||||| || ||| ||||||    
T  55467244 ggtttggtttggttcggttagtaaaatcaaaactgcaaaccgaaccaaaccatacggttgagtaaaaaattgatctgaatacatccaaaccaaatgcggt 55467145  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||  |||| |||| ||  || ||||||||||||||||  |||||||||| || |||||||    
T  55467144 tttttgcggtttcaatttggattggttcggtctgcggtttttctattggattggttcggttttgaacaccc 55467074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 43030849 - 43030895
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccg 153  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  43030849 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccg 43030895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43030747 - 43030828
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagta 77  Q
    |||||||||| ||  |||||||||||||||||||||||||||     | |||||||||||||||||||||||| ||||||||    
T  43030747 aattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcgaaaaagattattcttgagctatgtaatttggctagta 43030828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 277
Target Start/End: Original strand, 48169144 - 48169313
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtt 207  Q
    ||||||||||||| ||||| | ||||| ||||||||||||||||| |||| || |||| |||  |||| | ||| ||||  ||   || ||| |||| ||    
T  48169144 gtttggtttggtttggttggtaaaatgaaaaccgcaaaccgaaccaaaccatgtggttaagtaaaaaattgatctgaataaatggaaaccaaatgcgatt 48169243  T
Q  208 ttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||| | |||||||||||||| |||  ||| ||||||||||||||  ||| |||||| || |||||||    
T  48169244 ttttgcggcttcggtttgaattggtttgatttacggtttttctattggattgattcggttttgaacaccc 48169313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 107 - 253
Target Start/End: Complemental strand, 46253052 - 46252906
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||| |||||||  | ||||  ||||||||||||||||| |||| | ||||| | |  |||| | ||| |||| |||||||||||| ||||||    
T  46253052 ggtttggtttgcttcggttagtaaaattaaaaccgcaaaccgaaccaaaccatacggttgaataaaaaattgatctgaatacatccgaatcaaatgcggt 46252953  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctatt 253  Q
    |||||||| ||||  |||| |||||||   ||| | |||||||||||    
T  46252952 tttttgcaatttcaatttggattgattcgatttacagtttttctatt 46252906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 2831930 - 2831843
Alignment:
Q  179 atccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    |||| ||| ||||| || ||| ||||||||||| | |||| |||||| |||||||  |||||||||||||||||||  ||||||||||    
T  2831930 atccaaatacatccaaaccaaatgcggtttttttcggttttggtttggattgattcggtttgcggtttttctattggattggttcggt 2831843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 42362826 - 42362703
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||| ||| |||| | ||||| |||||||||||| |||| |||| ||||||| |||  |||| | ||| || | |||||||||||  ||| ||    
T  42362826 ggtttggtttgattcagttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaaatgatctgattgcatccgaatcatatgcagt 42362727  T
Q  207 tttttgcagtttcggtttgaattg 230  Q
    ||||| | ||||||||||| ||||    
T  42362726 tttttacggtttcggtttggattg 42362703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 50578505 - 50578434
Alignment:
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
    ||||||||||||||||||| |||| || |||||||| |||||||||||  ||| ||| || |||||||||||    
T  50578505 tttttgcagtttcggtttggattggttcagtttgcgatttttctattggattgattctgttttaaacaccct 50578434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 2565908 - 2565790
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||| || ||||| | ||||  ||||||||||||||||| |||| | | ||| |||  |||| | |||||||| ||||| ||| || ||||||    
T  2565908 ggtttggtttgttttggttggtaaaatcaaaaccgcaaaccgaaccaaaccatccagttgagtaaaaaaataatccgaatacatccaaattaaatgcggt 2565809  T
Q  207 tttttgcagtttcggtttg 225  Q
    ||||||| |||||| ||||    
T  2565808 tttttgcggtttcgatttg 2565790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 276
Target Start/End: Original strand, 52632599 - 52632765
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||| ||||| | ||||  |||||||||||| |||| |||| ||| ||| |||  |||||| ||  |||| ||||| || ||| |||    
T  52632599 tgcggtttggtttggtttggttggtaaaataaaaaccgcaaaccaaaccaaaccatgcagttgagtaaaaaagtgatatgaatacatccaaaccaaatgc 52632698  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
     |||||||||  ||||||      ||| || ||||| || ||||||||||| ||||||||||| || ||||||    
T  52632699 agttttttgcgatttcgg------ttggttcagtttacgatttttctattgggttggttcggttttgaacacc 52632765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 276
Target Start/End: Original strand, 26758697 - 26758868
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||| ||||| | ||||  ||||||||||||||||| || | ||||||| |||   ||| | ||| |||| | ||| || ||| |||    
T  26758697 tgcggtttggtttggtttggttggtaaaatcaaaaccgcaaaccgaaccaaatcatgcggttgagtaacaaattgatctgaatac-tccaaaccaaatgc 26758795  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    | ||| ||||| ||||| ||| ||||| ||   |||  |||||||||||||  |||||||||| |||||||||    
T  26758796 gatttgttgcaatttcgatttaaattggttcgatttatggtttttctattggattggttcggttttaaacacc 26758868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 45629752 - 45629820
Alignment:
Q  208 ttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    |||||| ||||| ||||||||||||| ||||| | ||||||||||||| |  ||||||| |||||||||    
T  45629752 ttttgcggtttcagtttgaattgattcagtttacagtttttctattgaatctgttcggttttaaacacc 45629820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 5e-82; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 33910538 - 33910252
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || |||||||||||||| |||||||||||||     ||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  33910538 aattagaatcgaacctgatggtgcaacattggaaaaatcgaatcaaaagagattattcttaagttatgtaattgggctagtacatatttaagtaatattc 33910439  T
Q  96 attattcatgcggtttggtttggttcggttg-----ctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||||||||||||||||| ||||      |||| |||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  33910438 attattcttgcggtttggtttggtttggtttgattactgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcagtgcaaaagtcatccaaattcat 33910339  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| |||||||||||||||||  |||||||||| |||| |||  |||||||||||||||||| ||||||||||| || |||||||    
T  33910338 ccgaaccaagtgcggttttttgcgatttcggtttggattggtttgatttgcggtttttctattgggttggttcggttttgaacaccc 33910252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 45692117 - 45692398
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || || |||||||||||||| |||||| |||     |||||||||||||||| ||||||||||| ||||||||| |||||||||||||     
T  45692117 aattagaatcgaacctaatggtgcaacaatgaaaaaattgaatcaaaagagattattcttgagttatgtaattggactagtacatatttaagtaatattt 45692216  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45692217 attattcttgcggtttgttttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccaaattcatccgaa 45692316  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||||||| ||||||||| |||||| |||| |||| |||  |||| | ||||||||||  ||||||| | | ||||||||||    
T  45692317 ccaagtgcagttttttgccgtttcgatttggattggtttgatttgtgatttttctatttggttggtttgattttaaacaccc 45692398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 39256397 - 39256122
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||||||||||||||     | ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  39256397 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcgaaaaagattattcgtgagctatgtaatttggctagtacatgtttaagtaatattc 39256298  T
Q  96 attattcatgcggtttggtttggtt-----cggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||||||||||||     |||||||||| ||||||||||||||||||||| ||||| || |||||||||||||||||||| |||||||    
T  39256297 attattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccaaaccgcgcagttcagtgcaaaagtcatccaaattcat 39256198  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    ||||| ||||| ||||||||||  ||||||||||| |||| ||| |||||| |||||| ||||| || ||||||||    
T  39256197 ccgaaccaagtacggttttttgtggtttcggtttggattggtttggtttgctgtttttttattgggtgggttcggt 39256122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 51252182 - 51251906
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||| |||||||||||||||||||||||||||     |||||||||| ||  ||||||||||| ||||||||||||||||||||||||||    
T  51252182 aattagaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattattatttggctatgtaattaggctagtacatgtttaagtaatattc 51252083  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| ||||| |||||||||||     ||||| |||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||    
T  51252082 attattcttgcgggttggtttggtt-----gctgagatgcaaaccgcaaaccaaaccgaactgcgcggttcattgcaaaagtcatccgaattcatccgaa 51251988  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||| ||||||||||||| |||| | |||| |||||| | |||||||||||||||||||  |||||||||| ||||||||||    
T  51251987 ccaaatgcggttttttgcggtttagatttggattgatatggtttgcggtttttctattggattggttcggttttaaacaccc 51251906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 24910815 - 24910535
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || |||||||||||||||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24910815 aattagaatcgaacctgatggtgcaacaattgaaaaatcgaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 24910716  T
Q  96 attattcatgcggtttggttt-----ggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| | |||||||||||     |||||||||||||| ||||||||| ||||| ||||||||| |  ||||||| ||||||||||||||||||||||    
T  24910715 attattcttccggtttggtttggtttggttcggttgctgagatgcaaaccacaaactgaaccgaactgcacggttcaatgcaaaagtcatccgaattcat 24910616  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| ||||||||||||||||| |||| || ||| |||||     |||||||||||| ||||| ||||||||||| || |||||||    
T  24910615 ccgaaccaagtgcggttttttgcggttt-ggattggattga-----tttgcggtttttttattgggttggttcggttttgaacaccc 24910535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 16529253 - 16528970
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||||||| |||| |||||     |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16529253 aattagaatcgaacctgatggtgcaacaatgaaaaattcgaatcaaaagagattattcttgggctatgtaattgggctattacatgtttaagtaatattc 16529154  T
Q  96 attattcatgcggtttggtttggttcggtt-----gctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    | ||||| ||||||||||||||||| ||||     ||||| |||||||||||| ||  |||||||| | || |||||||||||||| |||||||||||||    
T  16529153 actattcttgcggtttggtttggtttggtttggttgctgagatgcaaaccgcatactaaaccgaactgcgctgttcagtgcaaaagccatccgaattcat 16529054  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
     |||| ||||||| |||||||||||||||| |||| |||| |||||||||| |||||||||||||||| ||| ||| || |||||    
T  16529053 acgaaccaagtgcagttttttgcagtttcgatttggattg-tttagtttgcagtttttctattgagttagtttggttttgaacac 16528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 32954400 - 32954589
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||  || ||||||||||||||||||||||||||||     ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32954400 aattagaattgaacctgatggtgcaacaatggaaaaatcgaatcgaaagaaattattcttgagctatgtaattgggcttgtacatgtttaagtaatattc 32954499  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaa 185  Q
    ||||||| |  |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  32954500 attattcttatggtttggtttggttcggttgctgagatgcaaaccgcgaaccgaacggaaccgtgcggtttagtgcaaaagtcatccgaa 32954589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 35 - 277
Target Start/End: Original strand, 33474801 - 33475038
Alignment:
Q  35 aaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgc-----ggtttggtttggttcggttgctg 129  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||     |||||||||||||||||||| ||    
T  33474801 aaatcaaaagagattattcttgagctatgtaattgggctagtacatatttaagtaatattcgttattcttgcagtttggtttggtttggttcggttgatg 33474900  T
Q  130 aaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaatt 229  Q
    | ||||||| | ||||||||||||||||| |||||||||||||||||||||||||| |          ||||| |||||||| |  |||||||||| |||    
T  33474901 agatgcaaatcacaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatccgaact----------aagtgtggtttttttcgatttcggtttggatt 33474990  T
Q  230 gatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    | ||| ||||| ||||||||||||| ||||||| ||| || |||||||    
T  33474991 ggtttggtttgtggtttttctattgggttggtttggttttgaacaccc 33475038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 45 - 234
Target Start/End: Complemental strand, 6722529 - 6722341
Alignment:
Q  45 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaa 144  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  6722529 agattattcttgagctatgtaattgggtcagtacatgtttaagtaatattcatta-tcttgcggtttggtttggttcggttgctgagatgcaaaccgcaa 6722431  T
Q  145 accgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgattt 234  Q
    | |||| |||||||    ||||| |||||||||||||| ||||||||  ||| || || || |||||||  ||||| |||||||||||||    
T  6722430 atcgaatcgaaccgcaaagttcaatgcaaaagtcatccaaattcatctaaattaaatgtggctttttgcgatttcgatttgaattgattt 6722341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 44918862 - 44919116
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||  |||||| ||||||||||||||||| ||     | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44918862 aattagaatcgaacttgatggagcaacaatggaaaaatcaaatcaaaaaagattattcttgagctatgtaattggactagtacatgtttaagtaatattc 44918961  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| |||||| |          |||||| || |||||||||||||||| |||| ||||| || ||||||||||||||| |||||||||||||| ||    
T  44918962 attattcttgcggtct----------ggttgcagagatgcaaaccgcaaaccaaaccaaaccgcgcagttcagtgcaaaagttatccgaattcatccaaa 44919051  T
Q  196 tcaagtgcgg-ttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttg 259  Q
    |||||||||| |||||| | |||||  ||||  |||||||  |||||| ||||||||||||||||    
T  44919052 tcaagtgcggtttttttacggtttcaatttgggttgatttgatttgcgatttttctattgagttg 44919116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 266
Target Start/End: Original strand, 11899375 - 11899631
Alignment:
Q  16 tgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtt 110  Q
    |||||||||||||||||||||||| ||     | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  11899375 tgatggtgcaacaatggaaaaatcaaatcaaaaaagattattcttgagctatgtaattgagctagtacatatttaagtaatattcattattcttgcggtt 11899474  T
Q  111 tggtttgg-----ttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccg-aatcaagtgcg 204  Q
    ||||||||     |||||||||||| |||||||||||||| | |||| ||| ||  | || ||||||||||||||| ||||||||||| |||||||| ||    
T  11899475 tggtttggtttgattcggttgctgagatgcaaaccgcaaatcaaaccaaactgtatgttttagtgcaaaagtcatctgaattcatccgaaatcaagtacg 11899574  T
Q  205 gttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
     |||||| |  |     ||||||||| |||| ||||| ||||||||||||  ||||||||||    
T  11899575 attttttacgat-----tttgaattggtttaatttgccgtttttctattggattggttcggt 11899631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 5155043 - 5154883
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||          |||| ||||||||||    
T  5155043 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtctaaaagtcatc----------cgaaccaagtgcggt 5154954  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  5154953 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 5154883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 8211653 - 8211813
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||          ||||||||| ||||||||||    
T  8211653 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaag----------tcatccgaaccaagtgcggt 8211742  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  8211743 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 8211813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 20494108 - 20494268
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||||  |||||          ||||||||| ||||||||||    
T  20494108 ggtttggtttggttcggttgctgagatgcaaacagcaaatcgaaccgaaccgcgcggttcagtctaaaag----------tcatccgaaccaagtgcggt 20494197  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  20494198 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 20494268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 29707787 - 29707628
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||     |||||||||||  |||||||||||||| ||||||||| |||||||| |    
T  29707787 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccg-----tgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcgat 29707693  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||      |||||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  29707692 tttttg------cggtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 29707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 1160678 - 1160530
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||          
T  1160678 ggtttggtttggttcggttgctgagatgcaa-ccgcaaatcgaaccgaatcgtgcggttcagtgcaaaagtcatctgaattcatctgaaccaag------ 1160586  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
        |||||||||| |||| ||||||||  |||||||||||| ||||| |||||||||||    
T  1160585 ----tgcagtttcgatttggattgatttgatttgcggtttttttattgggttggttcggt 1160530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 82 - 277
Target Start/End: Original strand, 29390096 - 29390276
Alignment:
Q  82 tttaagtaatattcattattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatc 181  Q
    ||||||||||||| ||||||| ||||||||| |||| ||     | ||| ||||||||||||||||||||||||||| |||||||||||||||||         
T  29390096 tttaagtaatatttattattcgtgcggtttgatttgatt-----gttgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaag----- 29390185  T
Q  182 cgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
         ||||||||| |||| |||||||||| ||||||||||||  |||| ||| |||||| ||||||||||||| || ||||||| || |||||||    
T  29390186 -----tcatccgaaccaagcgcggttttttacagtttcggtttagattggtttggtttgcagtttttctattgaattagttcggttttgaacaccc 29390276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 253
Target Start/End: Original strand, 17652203 - 17652349
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||| ||||| |||| | |||  |||| ||||||| ||   |||||| |||||||| ||||| |||||| |||| |    
T  17652203 ggtttggtttggttcggttggtaaaatgaaaaccccaaatcaaacaaaaccatgcggttgaggaaaaaagtgatccgaatacatccaaatcaaatgcgat 17652302  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctatt 253  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  17652303 tttttgcggtttcggtttgagttggtttagtttgcggtttttctatt 17652349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 11072906 - 11072808
Alignment:
Q  179 atccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||| | |||||||| ||| ||||||||||||||||||||||||| |||| ||  ||||||||||||||||||| ||||||| ||| || |||||||    
T  11072906 atccgattacatccgaaccaaatgcggttttttgcagtttcggtttggattggttcggtttgcggtttttctattgggttggtttggttttgaacaccc 11072808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 27507119 - 27506978
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||||||| |||| | ||||  ||||||||||||||||| || | ||||||| |||  |||| | |||||||| |||||||| ||| ||||||    
T  27507119 ggtttggtttggttcagttggtaaaatcaaaaccgcaaaccgaaccaaagcatgcggttgagtaaaaaaatgatccgaatacatccgaaccaaatgcggt 27507020  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggttttt 248  Q
    ||||| |  ||| |||||| |||| || ||||||||||||||    
T  27507019 tttttacgattttggtttggattggttcagtttgcggttttt 27506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 12974045 - 12974215
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||  |||| |||||||||||| |||| ||  ||| |||  |||| | ||| |||| ||| |||| |||  ||| |    
T  12974045 ggtttggtttggttcggttggtaaaatcaaaacagcaaaccgaaccaaaccatgttgttgagtaaaaaattgatctgaatacattcgaaccaaacgcgat 12974144  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| |||||||||||||  ||| ||  ||||||||||||||||||   |||||||||| || |||||||    
T  12974145 ttttttcagtttcggtttgggttggttcggtttgcggtttttctattagattggttcggttttgaacaccc 12974215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 25559632 - 25559512
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||| ||||||| ||||| | ||||  ||||| ||||||||||| |||| | ||||| |||  |||| | ||||||||  ||||||| ||| |||    
T  25559632 tgcggtttgatttggtttggttggtaaaatcaaaaccacaaaccgaaccaaaccatacggttgagtaaaaaaatgatccgaatatatccgaaccaaatgc 25559533  T
Q  204 ggttttttgcagtttcggttt 224  Q
     ||||||||||||||||||||    
T  25559532 agttttttgcagtttcggttt 25559512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 13243208 - 13243291
Alignment:
Q  164 ttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttt 247  Q
    ||||||||||||||| || ||||||||||||| ||| |||| |||||||| |||| |||||| |||| |||  |||||||||||    
T  13243208 ttcagtgcaaaagtcgtctgaattcatccgaaccaaatgcgattttttgcggttttggtttggattggtttgatttgcggtttt 13243291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 26344660 - 26344561
Alignment:
Q  112 ggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtttttt 211  Q
    ||||||||||||||| | ||||  |||| |||||||||||| |||| ||||||| |||  |||| | |||||||| |||||||| ||| |||||||||||    
T  26344660 ggtttggttcggttggtaaaatcaaaactgcaaaccgaaccaaaccatgcggttgagtaaaaaattgatccgaatacatccgaaccaaatgcggtttttt 26344561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 39157850 - 39157745
Alignment:
Q  173 aaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaa 272  Q
    ||||| |||| ||| |||||||| ||| ||||||||||| || |||| ||||| |||| || |||||||||||||| ||||| ||||||||| | || ||    
T  39157850 aaagtgatccaaatacatccgaaccaaatgcggttttttacaatttcagtttggattggttcagtttgcggttttt-tattgggttggttcgattttgaa 39157752  T
Q  273 cacccta 279  Q
    |||||||    
T  39157751 cacccta 39157745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1160779 - 1160698
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaat-----cgaaagagattattcttgagctatgtaattgggctagta 77  Q
    ||||||||||  | |||||| |||||||||||||||||     ||||| |||||||||||||||||||||||| ||||||||    
T  1160779 aattagaatcgtacctgatgttgcaacaatggaaaaattgaatcgaaaaagattattcttgagctatgtaatttggctagta 1160698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 6248541 - 6248602
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggtt 165  Q
    ||||||||||||||||||||||| | ||||  ||||||||||||||||| |||| |||||||    
T  6248541 tgcggtttggtttggttcggttggtaaaatcaaaaccgcaaaccgaaccaaaccatgcggtt 6248602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 9961833 - 9961712
Alignment:
Q  130 aaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaatt 229  Q
    ||||| |||| ||||| | |||| || | ||||||| |||  |||||| |||||||| ||||| || ||| ||||||||||||||||||| ||||| |||    
T  9961833 aaatgaaaacagcaaatcaaaccaaatcatgcggttgagtaaaaaagtgatccgaatacatccaaaccaaatgcggttttttgcagtttcagtttggatt 9961734  T
Q  230 gatttagtttgcggtttttcta 251  Q
    | || |||||| | ||||||||    
T  9961733 ggttcagtttgtgatttttcta 9961712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29389353 - 29389425
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcg-----aaagagattattcttgagctatgtaatt 68  Q
    |||||||||| || ||||||||||||||||||||||||||     |||||||||||||||||| | |||||||    
T  29389353 aattagaatcgaacctgatggtgcaacaatggaaaaatcgaattaaaagagattattcttgagttgtgtaatt 29389425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 264
Target Start/End: Original strand, 24630424 - 24630573
Alignment:
Q  114 tttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgc 213  Q
    |||||||| |||| ||||||  ||||||||||| ||||| |||| ||||||| |||  |||||| |||| ||| ||| | ||| || ||| | |||||||    
T  24630424 tttggttcagttgatgaaataaaaaccgcaaactgaaccaaaccatgcggttgagtaaaaaagtgatccaaatacattcaaattaaatgc-gatttttgc 24630522  T
Q  214 agtttcggtttgaattgatttagtttgcggtttttctattgagttggttcg 264  Q
     ||||| |||||  ||| ||  ||| ||||||||||||||| |||||||||    
T  24630523 ggtttcagtttgggttggttcggttagcggtttttctattgggttggttcg 24630573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 35375640 - 35375781
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtt 207  Q
    ||||||||||||| ||||| | ||||  |||||||||||| |||  |||| ||||||| |||  |||| | ||| |||| ||| |||| ||| || ||||    
T  35375640 gtttggtttggttaggttggtaaaataaaaaccgcaaaccaaacaaaaccatgcggttgagtaaaaaaatgatctgaatacattcgaaccaaatgtggtt 35375739  T
Q  208 ttttgcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    ||||||  |||||||||| ||||     |||||||||||||||||||    
T  35375740 ttttgcgatttcggtttggattg-----gtttgcggtttttctattg 35375781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 3937231 - 3937368
Alignment:
Q  113 gtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttg 212  Q
    |||||||| ||||||| ||||  ||||||||||||||||| |||| || ||||  ||  |||| | |||| ||| ||||| || ||  ||| ||||||||    
T  3937231 gtttggtttggttgctaaaatcaaaaccgcaaaccgaaccaaaccatgtggttgggtaaaaaaattatccaaatacatccaaaccagatgcagttttttg 3937330  T
Q  213 cagtttcggtttgaattgatttagtttgcggtttttct 250  Q
    |||||||| |||| |||| ||  ||||||| |||||||    
T  3937331 cagtttcgatttggattggttcggtttgcgatttttct 3937368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 35992205 - 35992050
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||| ||||| | ||| | |||| ||||||| |||| |||| |||| || ||   |||||| |||||||  ||||| ||| || ||| ||    
T  35992205 ggtttggtttggtttggttggtaaaaagaaaactgcaaaccaaaccaaaccatgcgattgaggaaaaaagtgatccgaacacatccaaatgaaatgcagt 35992106  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggtt 262  Q
    |||||   |||||| |||| |||| || ||||||| |||||| |||||| ||||||    
T  35992105 tttttatggtttcgatttggattggttcagtttgcagtttttatattgaattggtt 35992050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 209
Target Start/End: Complemental strand, 36203055 - 36202953
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||| ||||||||||| | ||||| || ||||||||| |||| |||| ||||||| |||  ||| || | |||||| ||||| || ||| ||||||    
T  36203055 ggtttggtatggttcggttggtaaaatgaaagccgcaaaccaaaccaaaccatgcggttgagtaaaaatgtgaaccgaatacatccaaaccaaatgcggt 36202956  T
Q  207 ttt 209  Q
    |||    
T  36202955 ttt 36202953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 8165066 - 8164977
Alignment:
Q  188 catccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||| ||| ||||||||||||  |||||||||   |||| ||  ||||||| ||||||||||| ||||||||| | || |||||||    
T  8165066 catccgaaccaaatgcggttttttgtggtttcggttgtgattggttcggtttgcgatttttctattgggttggttcgattttgaacaccc 8164977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 16063279 - 16063404
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    |||| |||||||||||| ||||| | ||||  ||||||||||| ||||| || | ||||||| |||  |||| | || ||||| ||||  |||||| ||     
T  16063279 tgcgatttggtttggttgggttggtaaaatcaaaaccgcaaactgaaccaaatcatgcggttgagtaaaaaaattattcgaatacatctaaatcaaatgt 16063378  T
Q  204 ggttttttgcagtttcggtttgaatt 229  Q
    |||||||||| ||||| |||| ||||    
T  16063379 ggttttttgcggtttcagtttcaatt 16063404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 4967715 - 4967803
Alignment:
Q  189 atccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||||||| |||| ||||||| ||||| || ||| |||| || |||||  |||||||||||||  || ||||||| || |||||||    
T  4967715 atccgaatcaaatgcgattttttgtagttttggcttggattggttcagtttttggtttttctattggatttgttcggttttgaacaccc 4967803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 42789127 - 42789091
Alignment:
Q  149 aaccgaaccgtgcggttcagtgcaaaagtcatccgaa 185  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  42789127 aaccgaaccgtacggttcagtgcaaaaatcatccgaa 42789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 151; Significance: 1e-79; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 106356 - 106642
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||| |||||||||||||||||||||||||||     ||| |||||| ||  ||||||||||| ||||||||||||||||||||||||||    
T  106356 aattagaatcgaatttgatggtgcaacaatggaaaaatcgaataaaaagaaattattattaggctatgtaattaggctagtacatgtttaagtaatattc 106455  T
Q  96 attattcatgcggtttggtt-----tggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||||| ||||||     ||||||||||| ||| |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  106456 attattcttgcgggttggttgggtttggttcggttgttgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcat 106555  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| ||| ||||||||||||| |||| |||||| |||||||| ||||||  ||||||||||| ||||||||||| ||||||||||    
T  106556 ccgaaccaaatgcggttttttgcggtttaggtttggattgatttggtttgctatttttctattgggttggttcggttttaaacaccc 106642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 128963 - 129092
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||| |||||||||||||||||||||||||||     |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  128963 aattagaatcgaatttgatggtgcaacaatggaaaaatcgaatataaagagattattattgggctatgtaattaggctagtacatgtttaagtaatattc 129062  T
Q  96 attattcatgcggtttggtttggttcggtt 125  Q
    ||||||| ||||| ||||||||||| ||||    
T  129063 attattcttgcgggttggtttggtttggtt 129092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 1e-79; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 30193742 - 30193456
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||| |||| || ||||||||||||||||||||||||||||     ||| ||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  30193742 aattaaaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagaaattattcttgagctatgtaattgggataatacatatttaagtaatattc 30193643  T
Q  96 attattcatgcggt-----ttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||||||     ||||||||||||||||||||| |||||||| |||||| |||||||||||  ||||||| |||||||||||| |||||||||    
T  30193642 attattcttgcggtatggtttggtttggttcggttgctgagatgcaaactgcaaactgaaccgaaccgcacggttcattgcaaaagtcatacgaattcat 30193543  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||| |||||||||||| | ||||||||||| |||| ||| |||||| |||||||||||||||||||||||| || |||||||    
T  30193542 ccgaatcatgtgcggttttttacggtttcggtttggattggtttggtttgcagtttttctattgagttggttcggttttgaacaccc 30193456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 48996400 - 48996686
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| ||| |||||||||||||||| ||||||||||     |||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  48996400 aattagaatcgaatttgatggtgcaacaatgaaaaaatcgaatcaaaagagattattcttaggctatgtaattaggctagtacatgtttaagtaatattc 48996499  T
Q  96 attattcatgcggtt-----tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||     |||||||||||||||||||| |||||||||||||| | |||||||||| |||||||| ||||||||||||||||||| ||    
T  48996500 attattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaatcaaaccgaaccgcgcggttcattgcaaaagtcatccgaattgat 48996599  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||| |||||||| |||||||| |||||| |||| |||| ||| |||||| |||||||||||| ||||||| ||| || |||||||    
T  48996600 ccgaaccaagtgcgattttttgcggtttcgatttggattggtttggtttgcagtttttctattgggttggtttggttttgaacaccc 48996686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 10219004 - 10219280
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaaa-----gagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || | ||||||||||||||||||||||| ||      ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10219004 aattagaatcgaaccagatggtgcaacaatggaaaaatctaatcaaatgagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 10219103  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| |||||||||||||||| |      ||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||||| ||||| ||||    
T  10219104 attattcttgcggtttggtttggtact-----tgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcagtgtaaaagtcatccgagttcattcgaa 10219198  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||||||| ||| ||||||| || |||||||    
T  10219199 ccaagtgcagttttttgcggtttcggtttggattggtttggtttgcggtttttctattgggttcgttcggttttgaacaccc 10219280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 32137013 - 32137300
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    ||||| |||| || ||||||||||||||||| ||||||||||     ||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32137013 aattaaaatcgaacctgatggtgcaacaatgaaaaaatcgaataaaaagaaattattcttaagctatgtaattgggctagtacatgtttaagtaatattc 32137112  T
Q  96 attattcatgcggtttggtttg-----gttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaa---tt 187  Q
    || |||| || |||||||||||     ||||||||||||| |||||||||||||||| ||||||||||  ||||||| ||||||||||||| |||   ||    
T  32137113 atcattcttgtggtttggtttgatttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcacggttcattgcaaaagtcatctgaaaaatt 32137212  T
Q  188 catccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    ||||||||||||||||| |||||||| ||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| || |||||    
T  32137213 catccgaatcaagtgcgattttttgcggtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacac 32137300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 8176364 - 8176088
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||| ||| || ||||||||||||||||||||||||||||     |||||||||| ||| |||||||||||||||||||||||||||||||||| |||    
T  8176364 aattaggatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattatttttgggctatgtaattgggctagtacatgtttaagtaatcttc 8176265  T
Q  96 attattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaa 195  Q
    ||||||| |||||||||||||||||     ||||| |||||||||||||| ||||||||||   ||||||||||||||||||||| ||| ||||||||||    
T  8176264 attattcttgcggtttggtttggtt-----gctgagatgcaaaccgcaaatcgaaccgaacgacgcggttcagtgcaaaagtcattcgagttcatccgaa 8176170  T
Q  196 tcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
     ||||||||||||||||| |||||| |||| |||| ||| ||||| ||||||||||||  ||||||||| | || |||||||    
T  8176169 ccaagtgcggttttttgcggtttcgatttggattggtttggtttgtggtttttctatttggttggttcgattttgaacaccc 8176088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 31301720 - 31301996
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa------agagattattcttgagctatgtaattgggctagtacatgtttaagtaatatt 94  Q
    |||||||||| || ||||||||||||||||| |||| |||||      | | |||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  31301720 aattagaatcgaaactgatggtgcaacaatgaaaaagtcgaataaaaaaaaaattattcttgagttatgtaattgggctaatacaagtttaagtaatatt 31301819  T
Q  95 cattattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccga 194  Q
     ||||||| ||||||||||||     |||||||||| |||||||||||||||||||| ||||| || ||||||||| |||||||||| ||||||||||||    
T  31301820 gattattcttgcggtttggtt-----cggttgctgagatgcaaaccgcaaaccgaactgaaccatgtggttcagtg-aaaagtcatctgaattcatccga 31301913  T
Q  195 atcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    | |||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||| ||||||||||| || |||||||    
T  31301914 accaagtgcggttttttgcagtttcggtctggattggtttggtttgcggtttttctattgggttggttcggttttgaacaccc 31301996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 40899846 - 40899623
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||  ||| |||||||||||||||||||||||||||     ||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||    
T  40899846 aattagaattgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattatccttgggctatgtaattgggctattacatgtttaagtaacattc 40899747  T
Q  96 attattcatgcggtttggtttggtt-----cggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| |||||||||||||||||     |||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  40899746 attattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagcgcaaaagtcatccgaattcat 40899647  T
Q  191 ccgaatcaagtgcggttttttgca 214  Q
    ||||| |||||||| |||||||||    
T  40899646 ccgaaccaagtgcgattttttgca 40899623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 50570668 - 50570498
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  50570668 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 50570569  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  50570568 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 50570498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 29640008 - 29640178
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  29640008 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 29640107  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  29640108 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 29640178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 107 - 277
Target Start/End: Original strand, 42558096 - 42558266
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||  |||||||||||||| ||||||||| ||||||||||    
T  42558096 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 42558195  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  42558196 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 42558266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 5261501 - 5261331
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||| ||||||||| || |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |    
T  5261501 ggtttgatttggttcgatttctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaattcatccgaatcaagtgcgat 5261402  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||| |||| ||| || ||| |||||||||||| ||||||||||| || |||||||    
T  5261401 tttttgcggtttcggtttggattggtttggtatgcagtttttctattgggttggttcggttttgaacaccc 5261331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 82 - 276
Target Start/End: Complemental strand, 26477869 - 26477671
Alignment:
Q  82 tttaagtaatattcattattcatgcgg-----tttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaag 176  Q
    ||||||||||||||||||||| || ||     |||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||| ||| ||||||    
T  26477869 tttaagtaatattcattattcttgtggattggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcacggtttagtacaaaag 26477770  T
Q  177 tcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    ||||||||||||||||||| ||||||||||||||| | ||||| ||||| |||| ||| ||||||||||||| ||||  ||||||||||| |||||||||    
T  26477769 tcatccgaattcatccgaaccaagtgcggttttttacggtttcagtttggattggtttggtttgcggttttt-tattaggttggttcggttttaaacacc 26477671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 107 - 266
Target Start/End: Original strand, 36078697 - 36078856
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  36078697 ggtttggtttggttcggttgctgagatgcaaactgcaaactgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 36078796  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    |||||||  ||||||||||| ||| ||  ||||||||||||||||||| |||||||||||    
T  36078797 tttttgcgatttcggtttgagttggttcggtttgcggtttttctattgggttggttcggt 36078856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 52345067 - 52345216
Alignment:
Q  35 aaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtt-----tggtttggttcggttgctg 129  Q
    ||||| |||| || ||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||     |||||||||||||||||||    
T  52345067 aaatcaaaagcgactattcttgagctatgcaatcggactagtacatgtttaagtaatattcattattcttgcggtttggtttggtttggttcggttgctg 52345166  T
Q  130 aaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtca 179  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52345167 agatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtca 52345216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 6333637 - 6333904
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||| || ||||||||||||| |||||||||| |||     |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6333637 aattagaatcgaacctgatggtgcaacgatggaaaaattgaatcaaaagagattattcttgagctatgtaattgggctagtacatatttaagtaatattc 6333736  T
Q  96 attattcatgc----------ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaa 185  Q
    ||||||| |||          |||||||||||||||||||||| | |||||| ||||||| ||||||||| || ||||||||||| |||||             
T  6333737 attattcttgcggtttagtttggtttggtttggttcggttgctaagatgcaagccgcaaatcgaaccgaatcgcgcggttcagtgtaaaag--------- 6333827  T
Q  186 ttcatccgaatcaagtgcgg-ttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggtt 262  Q
     ||||| ||| ||||||||| |||||||| ||||||||||| |||  ||| ||||||||||||||||||| |||||||    
T  6333828 -tcatctgaaccaagtgcggtttttttgcggtttcggtttggattagtttggtttgcggtttttctattgggttggtt 6333904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 29643417 - 29643247
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||| ||||||||||  |||||||||||||| ||||||||| ||| ||||||    
T  29643417 ggtttggtttggttcggttgctgagatgcaagccacaaaccgaaccgaaccgcgcggttcagtttaaaagtcatccgaactcatccgaaccaaatgcggt 29643318  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| |||||||||||  ||| ||  ||||||||||||||||||| |||||||| || || |||||||    
T  29643317 tttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggttcagttttgaacaccc 29643247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 49 - 185
Target Start/End: Original strand, 52345225 - 52345356
Alignment:
Q  49 tattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccg 148  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||     ||||||||||||||||||| ||||||||| |||||||    
T  52345225 tattcttgagctatgcaattgggctagtacatgtttaagtaatattcattattcttgc-----ggtttggttcggttgctgagatgcaaaccacaaaccg 52345319  T
Q  149 aaccgaaccgtgcggttcagtgcaaaagtcatccgaa 185  Q
    ||||||||| |||| |||||| |||||||||||||||    
T  52345320 aaccgaaccatgcgattcagtacaaaagtcatccgaa 52345356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 40806542 - 40806393
Alignment:
Q  36 aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggttt-----ggttcggttgctga 130  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||     ||||| ||||||||    
T  40806542 aatcaaaagagattattcttgagctatgtaattgagctagtacatatttaagtaatattcattattcttgcggtttggtttggtttggttcagttgctga 40806443  T
Q  131 aatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaa 185  Q
     ||||||||||||     || | ||||||||||||||||| ||||||||||||||    
T  40806442 gatgcaaaccgca-----aatcaaaccgtgcggttcagtgtaaaagtcatccgaa 40806393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 1564664 - 1564494
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||||||| |||| | ||||  ||||||||||||||||| |||| ||||||| | |  || | | |||| ||| |||||||| ||| ||||||    
T  1564664 ggtttggtttggttcagttggtaaaatcaaaaccgcaaaccgaaccaaaccatgcggttaactaaaagaattatcccaatacatccgaaccaaatgcggt 1564565  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||||||| |||||||||||| ||||| || ||||||| |||  |||||| ||| ||||||||||    
T  1564564 tttttgcagtttcgatttgaattgattcagtttacgatttttcttttggattggtttggttttaaacaccc 1564494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 23937269 - 23937155
Alignment:
Q  16 tgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtt 110  Q
    |||||||||||||||||||||||| ||     |||||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||||| |||||||    
T  23937269 tgatggtgcaacaatggaaaaatcaaatctaaagagattattcttgagttatgtaattggactagtatatgtttaagtaatatttattattcttgcggtt 23937170  T
Q  111 tggtttggttcggtt 125  Q
    | |||||||| ||||    
T  23937169 tagtttggtttggtt 23937155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 43630908 - 43630983
Alignment:
Q  50 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggttcggtt 125  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  43630908 attcttgagctatgtagttgggctattacatttttaagtaatattcattattcttgcggtttggtttggtttggtt 43630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 107 - 276
Target Start/End: Original strand, 20986875 - 20987044
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||  | ||||  ||| | |||||| |||| |||  ||||||| |||  |||| | |||||||| |||||||| ||| |||| |    
T  20986875 ggtttggtttggttcggttagtaaaatcaaaatcccaaaccaaaccaaacaatgcggttgagtaaaaaattgatccgaatacatccgaaccaaatgcgat 20986974  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacc 276  Q
    ||||||| ||||||||||| |||| ||| |||||||||||||||||||  ||||||| || || ||||||    
T  20986975 tttttgcggtttcggtttggattggtttggtttgcggtttttctattggattggttctgttttgaacacc 20987044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 112 - 279
Target Start/End: Complemental strand, 54273536 - 54273368
Alignment:
Q  112 ggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaag-tcatccgaattcatccgaatcaagtgcggttttt 210  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||| | ||||||| |||  ||||  | |||||||| |||||||| ||| |||||||| |    
T  54273536 ggtttggttcggttgctaaaataaaaaccgcaaaccaaaccgaatcatgcggttgagtaaaaaaaatgatccgaatacatccgaaccaaatgcggtttgt 54273437  T
Q  211 tgcagttt-cggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacacccta 279  Q
     || |||| |||||||  ||||||  ||||||||||||||||||| ||||||||||| || |||||||||    
T  54273436 -gcggttttcggtttgggttgattcggtttgcggtttttctattgggttggttcggttttgaacacccta 54273368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 111 - 275
Target Start/End: Original strand, 46471895 - 46472059
Alignment:
Q  111 tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttt 210  Q
    |||||||||| ||||  | ||||| |||||||||||| |||| || | ||||||| |||  |||||| |||||||| |||||||| ||| || |||||||    
T  46471895 tggtttggtttggttcataaaatgaaaaccgcaaaccaaaccaaatcatgcggttgagtaaaaaagtgatccgaatacatccgaaccaaatggggttttt 46471994  T
Q  211 tgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacac 275  Q
    ||| |||||| |||| |||| || | ||||||||||||||||||  || ||||||| || |||||    
T  46471995 tgcggtttcgatttggattggttcaatttgcggtttttctattggatttgttcggttttgaacac 46472059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 51395347 - 51395426
Alignment:
Q  198 aagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||||||||| |||||||||||||||| |||  |||||||||||||||||| ||||||||||| || |||||||    
T  51395347 aagtgcggttttttgcggtttcggtttgaattggtttgatttgcggtttttctattgggttggttcggttttgaacaccc 51395426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 48338815 - 48338960
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtt 207  Q
    ||||||||||||||||||| | ||||| |||||||||||| |||| |||| ||||||| ||   |||||| |||||||| ||||| ||  || ||||| |    
T  48338815 gtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaactaaatgcgg-t 48338913  T
Q  208 ttttgcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    |||||||||||| |||||  ||| ||  |||||||||||||||||||    
T  48338914 ttttgcagtttcagtttgggttggttcggtttgcggtttttctattg 48338960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 41325871 - 41326018
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||| | ||||  |||| |||||||||||| |||| ||| ||| |||  | || | |||| ||| |||||||||||| |||  |    
T  41325871 ggtttggtttggttcggttggtaaaatcaaaactgcaaaccgaaccaaaccatgcagttgagtaaataattgatccaaatacatccgaatcaaatgcaat 41325970  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    |||||||| ||||| |||  ||| |||| |||||||||||||||||||    
T  41325971 tttttgcattttcgatttagattaatttggtttgcggtttttctattg 41326018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 8485154 - 8485276
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||| ||||||||| | ||||  ||||||||||||| ||| |||| ||||||| |||  | || | || ||||| |||||||||||| ||| ||    
T  8485154 ggtttggtttagttcggttggtaaaatcaaaaccgcaaaccggaccaaaccatgcggttgagtaaataaatgattcgaatacatccgaatcaaatgcagt 8485253  T
Q  207 tttttgcagtttcggtttgaatt 229  Q
    ||||| |||||||||||||||||    
T  8485254 tttttacagtttcggtttgaatt 8485276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 15986159 - 15986049
Alignment:
Q  136 aaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgattta 235  Q
    ||||||||||| ||||| |||| ||||||| | |  |||| | |||||||| |||||||||||| |||| |||||||| ||||||||||| |||||||      
T  15986159 aaaccgcaaactgaaccaaaccatgcggttgaataaaaaattgatccgaatacatccgaatcaaatgcgattttttgcggtttcggtttggattgattcg 15986060  T
Q  236 gtttgcggttt 246  Q
    |||||||||||    
T  15986059 gtttgcggttt 15986049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 263
Target Start/End: Complemental strand, 23449590 - 23449436
Alignment:
Q  109 tttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttt 208  Q
    |||||||||||||||||| | ||||  |||| |||||| ||||| |||| ||||||| |||  |||| | |||||||| ||||| |||||| ||| ||||    
T  23449590 tttggtttggttcggttggtaaaatcaaaactgcaaactgaaccaaaccatgcggttgagtaaaaaaatgatccgaatacatccaaatcaaatgcagttt 23449491  T
Q  209 tttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttc 263  Q
    |||||  ||| |||||| |||||||  ||||||| ||||||| || | |||||||    
T  23449490 tttgcgattttggtttggattgattcggtttgcgatttttctttttatttggttc 23449436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 5121926 - 5121828
Alignment:
Q  179 atccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||| | |||||||| ||| |||| |||||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  5121926 atccgattacatccgaaacaaatgcgattttttgcggtttcggtttggtttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 5121828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 18399554 - 18399659
Alignment:
Q  172 aaaagtcatccgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaa 271  Q
    |||||| |||| ||| || ||||| ||| ||| ||||||| |  |||||||||| |||||||  |||||||||||||| |||||||||||||||| || |    
T  18399554 aaaagtgatccaaatacaaccgaaccaattgcagttttttacgatttcggtttggattgattaggtttgcggtttttcgattgagttggttcggttttga 18399653  T
Q  272 acaccc 277  Q
    ||||||    
T  18399654 acaccc 18399659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 278
Target Start/End: Original strand, 3999230 - 3999402
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||  ||| |||| | ||||  ||||||||||||||||| |||| || |||| |||   ||||| || | ||| ||||  || ||| ||||||    
T  3999230 ggtttggtttaattcagttggtaaaataaaaaccgcaaaccgaaccaaaccatgtggttgagtaagaaagtgattcaaatacatcttaaccaaatgcggt 3999329  T
Q  207 tttttgcagtttcggtttgaatt-gatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
    ||||||| ||||||||||| ||| | ||  ||||||||||||| ||||| ||||||||||| || ||||||||    
T  3999330 tttttgcggtttcggtttggatttggttcggtttgcggtttttttattgggttggttcggttttgaacaccct 3999402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 23119916 - 23119754
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||| ||||||||| | ||||| ||| ||||||||||||| || | ||||||| ||    ||| | ||| || | ||||| || ||| |||    
T  23119916 tgcggtttggtttagttcggttggtaaaatgaaaatcgcaaaccgaaccaaatcatgcggttgagcaagaaaatgatctgattacatcctaaccaaatgc 23119817  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    |||||||||  |||||| ||||| ||||||  |||||| ||||| ||||||  ||||||||||    
T  23119816 ggttttttgtggtttcgatttgagttgattcggtttgcagttttcctattggattggttcggt 23119754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 27743810 - 27743952
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||||||| |||| | ||||  |||||||||||| |||| | || ||||||| |||| |||| | ||  ||||  ||||||| ||||| ||||    
T  27743810 ggtttggtttggttcagttggtaaaattaaaaccgcaaaccaaaccaacccatgcggttgagtgaaaaattgatttgaataaatccgaaccaagtacggt 27743909  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttc 249  Q
    ||||| |  ||| |||||| |||| || |||||||||||||||    
T  27743910 tttttacgattttggtttggattggttcagtttgcggtttttc 27743952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 36106077 - 36105959
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||| ||||||||||| | ||||| |||||||||| | || | |||| ||||||| |||  |||||| ||| |||| ||||| |||||| ||| ||    
T  36106077 ggtttggtctggttcggttggtaaaatggaaaccgcaaagcaaagcaaaccatgcggttgagtaaaaaagtgatctgaatacatccaaatcaaatgctgt 36105978  T
Q  207 tttttgcagtttcggtttg 225  Q
    |||||||  ||||||||||    
T  36105977 tttttgcgatttcggtttg 36105959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 18536266 - 18536096
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||| ||||||||||||  | ||||| ||||  |||||| || | |||| || |||| |||  |||||| |||||||| ||||| |   || ||||||    
T  18536266 ggtttgatttggttcggtttgtaaaatgaaaactacaaaccaaagcaaaccatgaggttgagtaaaaaagttatccgaatacatccaagctaaatgcggt 18536167  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||   ||| || ||||||| ||||||||||||  |||||| ||| || |||||||    
T  18536166 tttttgcggtttcggtttaggttggttcagtttgcagtttttctattggattggtttggttttgaacaccc 18536096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 253
Target Start/End: Complemental strand, 48653511 - 48653365
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||| |||   ||||  ||| | ||||||||||| |||| ||| ||| |||  |||| | || | ||| |||||||| ||| ||||      
T  48653511 ggtttggtttggttcgattgacaaaatcaaaatcacaaaccgaaccaaaccatgcagttgagtaaaaaaatgattcaaatacatccgaaccaaatgcgac 48653412  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctatt 253  Q
    |||||||||||||||||||| ||| ||  ||| ||||||||||||||    
T  48653411 tttttgcagtttcggtttgagttggttcggttcgcggtttttctatt 48653365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 18881560 - 18881489
Alignment:
Q  206 ttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||||||||| |||||| ||| |||  ||| |||||||| |||||  |||||||||| ||||||||||    
T  18881560 ttttttgcagtttcagtttgagttggtttgatttacggtttttttattggattggttcggttttaaacaccc 18881489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 10777979 - 10777822
Alignment:
Q  111 tggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggttttt 210  Q
    |||||||||||||||||| ||||  ||||||||| |||||  | ||| ||||||| |||  |||  | |||||||| |||| ||||||| |||| ||||     
T  10777979 tggtttggttcggttgctaaaataaaaaccgcaagccgaattgtaccatgcggttgagtaaaaatattatccgaatacatctgaatcaaatgcgatttt- 10777881  T
Q  211 tgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
            || |||| |||| ||| ||||| ||||||||||||| ||||||||||| || |||||||    
T  10777880 --------cgctttggattggtttggtttggggtttttctattgggttggttcggttttgaacaccc 10777822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 48293037 - 48292919
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    ||||||||||| || ||| | | ||||| |||||||||||| |||| |||| || |||| ||   |||||| |||||||| ||||| || ||| |||| |    
T  48293037 ggtttggtttgtttgggtaggtaaaatgaaaaccgcaaaccaaaccaaaccatgtggttgaggaaaaaagtgatccgaatacatccaaaccaaatgcgat 48292938  T
Q  207 tttttgcagtttcggtttg 225  Q
    |||| || |||||||||||    
T  48292937 ttttcgcggtttcggtttg 48292919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 21069534 - 21069618
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatcc 192  Q
    |||||||||||||||||||| | |||| |||| ||||||||||||  |||| ||||||| |||  |||| | |||||||| |||||    
T  21069534 ggtttggtttggttcggttggtaaaat-caaaacgcaaaccgaacaaaaccatgcggttgagtaaaaaattgatccgaatacatcc 21069618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29639776 - 29639817
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa 42  Q
    |||||||||| || |||||| |||||||||||||||||||||    
T  29639776 aattagaatcgaacctgatgatgcaacaatggaaaaatcgaa 29639817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 40806362 - 40806305
Alignment:
Q  209 tttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggt 266  Q
    ||||||||||||||||| |||| |||  ||| || ||||| |||||||||||||||||    
T  40806362 tttgcagtttcggtttgtattggtttgatttacgatttttttattgagttggttcggt 40806305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 17845425 - 17845485
Alignment:
Q  194 aatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    |||||| || ||||||||||||||||||||||  ||| ||  |||||||||| ||||||||    
T  17845425 aatcaaatgaggttttttgcagtttcggtttgggttggttcggtttgcggttattctattg 17845485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 132; Significance: 3e-68; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 47532 - 47261
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaaaatcgaa-----agagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||  || |||||| |||||||||||| ||||||||     ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47532 aattagaatggaacctgatgttgcaacaatggacaaatcgaatcaaaagaaattattcttgagctatgtaattgggctagtagatgtttaagtaatattc 47433  T
Q  96 attattcatgcggtttggttt-----ggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| || ||||||||||     |||||||||| ||| ||| ||||| |||||| |||||| || ||||||||||||||||||||||||||||||||    
T  47432 attattcttgtggtttggtttggtttggttcggttgttgagatgaaaaccacaaaccaaaccgagccatgcggttcagtgcaaaagtcatccgaattcat 47333  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggtt 262  Q
    ||||| |||||||||||||||||  |||||||||| || | ||| |||||| |||||||||||| |||||||    
T  47332 ccgaaccaagtgcggttttttgcgatttcggtttggataggttttgtttgcagtttttctattgcgttggtt 47261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 40336 - 40065
Alignment:
Q  1 aattagaatcaaatctgatggtgcaacaatggaaa-----aatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattc 95  Q
    |||||||||  || |||||| |||||||||||| |     |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40336 aattagaatggaacctgatgttgcaacaatggacaaattgaatcaaaagaaattattcttgagctatgtaattgggctagtagatgtttaagtaatattc 40237  T
Q  96 attattcatg-----cggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcat 190  Q
    ||||||| ||      |||||||||||||||||||| ||| ||| ||||| |||||| |||||| ||  |||||||||||||||||||||||||||||||    
T  40236 attattcttgtggtttggtttggtttggttcggttgttgagatgaaaaccacaaaccaaaccgagccacgcggttcagtgcaaaagtcatccgaattcat 40137  T
Q  191 ccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggtt 262  Q
    ||||| |||||||||||||||||  |||||||||| || | |||  ||||| |||||||||||| |||||||    
T  40136 ccgaaccaagtgcggttttttgcgatttcggtttggataggttttatttgcagtttttctattgcgttggtt 40065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 5563 - 5393
Alignment:
Q  107 ggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggt 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||| |||| ||||||||| ||| ||||||    
T  5563 ggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcattcgaactcatccgaaccaaatgcggt 5464  T
Q  207 tttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    ||||||| ||||||||||   ||| ||  ||||||||||||||||||| ||||||||||| || |||||||    
T  5463 tttttgcggtttcggtttaggttggttcggtttgcggtttttctattgggttggttcggttttgaacaccc 5393  T

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Target: scaffold0204 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 14992 - 15164
Alignment:
Q  104 tgcggtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgc 203  Q
    ||||||||||||||||||||||| | ||||| |||||||| ||| |||| |||  ||||||| |||  |||||| ||| |||| ||||| || ||| |||    
T  14992 tgcggtttggtttggttcggttggtaaaatgaaaaccgcagaccaaaccaaactatgcggttgagta-aaaagtgatctgaatacatccaaaccaaatgc 15090  T
Q  204 ggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccc 277  Q
    |||||||| | ||||| |||||  ||| |||  |||||||||||||||||| ||||||| ||| || |||||||    
T  15091 ggttttttacggtttcagtttgggttggtttgatttgcggtttttctattgggttggtttggttttgaacaccc 15164  T

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Target: scaffold0204; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 26337 - 26482
Alignment:
Q  108 gtttggtttggttcggttgctgaaatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtcatccgaattcatccgaatcaagtgcggtt 207  Q
    ||||||||||||||||||| | ||||| |||||||||||| |||| |||| ||||||| ||   |||||| |||||||| ||||| ||  || ||||| |    
T  26337 gtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaactaaatgcgg-t 26435  T
Q  208 ttttgcagtttcggtttgaattgatttagtttgcggtttttctattg 254  Q
    |||||||||||| |||||  ||| ||  |||||||||||||||||||    
T  26436 ttttgcagtttcagtttgggttggttcggtttgcggtttttctattg 26482  T

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Target: scaffold0048 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 68924 - 69020
Alignment:
Q  182 cgaattcatccgaatcaagtgcggttttttgcagtttcggtttgaattgatttagtttgcggtttttctattgagttggttcggtattaaacaccct 278  Q
    ||||| |||||||| ||| ||||||||||||| ||||||||||  |||| ||  ||||  |||||||||||||   ||||||||| |||||||||||    
T  68924 cgaatacatccgaaccaaatgcggttttttgcggtttcggttttgattggttcggtttatggtttttctattggcctggttcggttttaaacaccct 69020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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