View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2324_high_19 (Length: 501)

Name: NF2324_high_19
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2324_high_19
NF2324_high_19
[»] chr7 (36 HSPs)
chr7 (216-484)||(6448119-6448385)
chr7 (76-217)||(6448430-6448570)
chr7 (20-57)||(31457997-31458034)
chr7 (24-60)||(42541863-42541899)
chr7 (23-58)||(1574718-1574753)
chr7 (20-59)||(32814431-32814470)
chr7 (25-60)||(33381578-33381613)
chr7 (20-59)||(33858866-33858905)
chr7 (20-59)||(34012517-34012556)
chr7 (20-59)||(39871613-39871652)
chr7 (20-58)||(2290016-2290054)
chr7 (20-58)||(29286037-29286075)
chr7 (20-58)||(36698131-36698169)
chr7 (20-58)||(38858297-38858335)
chr7 (25-63)||(45907239-45907277)
chr7 (20-57)||(19920563-19920600)
chr7 (25-58)||(20075112-20075145)
chr7 (20-57)||(21295151-21295188)
chr7 (20-57)||(26255096-26255133)
chr7 (25-58)||(27813495-27813528)
chr7 (25-58)||(28060982-28061015)
chr7 (20-57)||(32872375-32872412)
chr7 (25-58)||(38858563-38858596)
chr7 (20-57)||(39197718-39197755)
chr7 (20-57)||(41026096-41026133)
chr7 (20-57)||(41252361-41252398)
chr7 (20-57)||(48521029-48521066)
chr7 (25-57)||(9036669-9036701)
chr7 (20-60)||(9140533-9140573)
chr7 (25-65)||(30534697-30534737)
chr7 (25-57)||(31581677-31581709)
chr7 (20-52)||(31769332-31769364)
chr7 (25-57)||(32118168-32118200)
chr7 (20-60)||(36646637-36646677)
chr7 (25-57)||(38428412-38428444)
chr7 (25-57)||(40300230-40300262)
[»] chr3 (54 HSPs)
chr3 (20-58)||(43978159-43978197)
chr3 (20-65)||(12050392-12050437)
chr3 (20-57)||(26058546-26058583)
chr3 (20-57)||(47066934-47066971)
chr3 (20-60)||(24087335-24087375)
chr3 (20-60)||(25149122-25149162)
chr3 (25-65)||(42801513-42801553)
chr3 (23-59)||(48904266-48904302)
chr3 (20-59)||(4759351-4759390)
chr3 (20-59)||(7181348-7181387)
chr3 (25-60)||(14428874-14428909)
chr3 (20-59)||(22103929-22103968)
chr3 (20-59)||(37728711-37728750)
chr3 (20-59)||(41392880-41392919)
chr3 (20-59)||(44543780-44543819)
chr3 (20-59)||(51284062-51284101)
chr3 (25-59)||(10015794-10015828)
chr3 (25-59)||(19897841-19897875)
chr3 (25-59)||(20862462-20862496)
chr3 (25-59)||(26806113-26806147)
chr3 (20-66)||(28673294-28673340)
chr3 (20-58)||(35868083-35868121)
chr3 (20-58)||(43868102-43868140)
chr3 (20-58)||(46845492-46845530)
chr3 (25-59)||(50647682-50647716)
chr3 (20-65)||(1111648-1111693)
chr3 (20-57)||(7251282-7251319)
chr3 (20-57)||(8321925-8321962)
chr3 (20-57)||(9499497-9499534)
chr3 (20-57)||(10220933-10220970)
chr3 (25-58)||(12906418-12906451)
chr3 (20-57)||(14428610-14428647)
chr3 (20-57)||(21756486-21756523)
chr3 (20-57)||(26593765-26593802)
chr3 (25-58)||(28875256-28875289)
chr3 (20-65)||(30819870-30819915)
chr3 (25-58)||(33868713-33868746)
chr3 (20-57)||(45252773-45252810)
chr3 (20-57)||(46049986-46050023)
chr3 (20-53)||(46703031-46703064)
chr3 (25-57)||(4024052-4024084)
chr3 (25-57)||(4024316-4024348)
chr3 (25-57)||(4759088-4759120)
chr3 (25-61)||(8547170-8547206)
chr3 (25-57)||(9779979-9780011)
chr3 (25-57)||(15996778-15996810)
chr3 (25-57)||(16434977-16435009)
chr3 (20-52)||(20918224-20918256)
chr3 (20-52)||(20927186-20927218)
chr3 (25-57)||(31531416-31531448)
chr3 (25-57)||(36005769-36005801)
chr3 (25-57)||(45513642-45513674)
chr3 (23-59)||(48902711-48902747)
chr3 (25-57)||(52058985-52059017)
[»] chr4 (52 HSPs)
chr4 (20-64)||(56432511-56432555)
chr4 (20-62)||(45742806-45742848)
chr4 (20-57)||(43387993-43388030)
chr4 (20-57)||(47228728-47228765)
chr4 (20-61)||(49793087-49793128)
chr4 (20-57)||(53277185-53277222)
chr4 (25-60)||(20747435-20747470)
chr4 (23-58)||(21265219-21265254)
chr4 (23-58)||(30523763-30523798)
chr4 (20-58)||(4035824-4035862)
chr4 (20-58)||(4415964-4416002)
chr4 (20-58)||(20455181-20455219)
chr4 (20-58)||(28501386-28501424)
chr4 (20-58)||(46949991-46950029)
chr4 (20-57)||(5375557-5375594)
chr4 (20-57)||(5743659-5743696)
chr4 (20-61)||(6807425-6807466)
chr4 (20-57)||(9328240-9328277)
chr4 (20-57)||(14794022-14794059)
chr4 (25-58)||(18872716-18872749)
chr4 (20-57)||(25124246-25124283)
chr4 (20-57)||(29520164-29520201)
chr4 (20-57)||(30771528-30771565)
chr4 (20-57)||(31937076-31937113)
chr4 (20-57)||(32032993-32033030)
chr4 (25-58)||(32899223-32899256)
chr4 (20-57)||(33413518-33413555)
chr4 (20-57)||(34273219-34273256)
chr4 (20-57)||(39144404-39144441)
chr4 (20-57)||(44294789-44294826)
chr4 (20-57)||(47806860-47806897)
chr4 (20-57)||(49373693-49373730)
chr4 (20-57)||(52977982-52978019)
chr4 (20-57)||(53564356-53564393)
chr4 (25-57)||(4036090-4036122)
chr4 (25-57)||(4549629-4549661)
chr4 (25-57)||(7698474-7698506)
chr4 (25-57)||(20286026-20286058)
chr4 (25-57)||(20391442-20391474)
chr4 (20-60)||(20768216-20768256)
chr4 (25-57)||(26626007-26626039)
chr4 (25-57)||(29014064-29014096)
chr4 (26-58)||(29508597-29508629)
chr4 (25-57)||(35675925-35675957)
chr4 (20-60)||(36391851-36391891)
chr4 (25-57)||(39670991-39671023)
chr4 (20-52)||(41620519-41620551)
chr4 (20-60)||(45097165-45097205)
chr4 (20-60)||(48030310-48030350)
chr4 (23-59)||(54877753-54877789)
chr4 (25-57)||(55563132-55563164)
chr4 (25-57)||(55631999-55632031)
[»] scaffold0163 (1 HSPs)
scaffold0163 (25-64)||(1451-1490)
[»] scaffold0008 (1 HSPs)
scaffold0008 (20-63)||(259122-259165)
[»] chr6 (30 HSPs)
chr6 (25-60)||(16272973-16273008)
chr6 (20-58)||(11847570-11847608)
chr6 (20-65)||(25197144-25197189)
chr6 (20-65)||(34915543-34915588)
chr6 (23-59)||(12144041-12144077)
chr6 (25-65)||(16122519-16122559)
chr6 (20-59)||(15498627-15498666)
chr6 (20-59)||(25045643-25045682)
chr6 (20-58)||(402621-402659)
chr6 (20-50)||(1147267-1147297)
chr6 (20-58)||(4844399-4844437)
chr6 (21-59)||(12143777-12143815)
chr6 (25-59)||(13321331-13321365)
chr6 (20-58)||(13901640-13901678)
chr6 (20-58)||(23604459-23604497)
chr6 (20-58)||(30248646-30248684)
chr6 (20-57)||(231105-231142)
chr6 (20-57)||(2090658-2090695)
chr6 (20-57)||(8743188-8743225)
chr6 (20-57)||(34301832-34301869)
chr6 (25-58)||(34741731-34741764)
chr6 (25-57)||(9038642-9038674)
chr6 (25-57)||(9388529-9388561)
chr6 (20-60)||(11200591-11200631)
chr6 (25-57)||(11847837-11847869)
chr6 (25-57)||(13866593-13866625)
chr6 (20-52)||(17227527-17227559)
chr6 (21-57)||(22852332-22852368)
chr6 (25-57)||(23398144-23398176)
chr6 (25-57)||(31091445-31091477)
[»] chr1 (54 HSPs)
chr1 (20-59)||(11907230-11907269)
chr1 (25-59)||(2279951-2279985)
chr1 (20-58)||(52601990-52602028)
chr1 (25-57)||(45039677-45039709)
chr1 (20-59)||(7763749-7763788)
chr1 (20-59)||(11741395-11741434)
chr1 (25-60)||(17483730-17483765)
chr1 (25-64)||(35984395-35984434)
chr1 (20-59)||(37951949-37951988)
chr1 (20-59)||(39497431-39497470)
chr1 (20-58)||(4102714-4102752)
chr1 (25-59)||(5765995-5766029)
chr1 (25-59)||(9202243-9202277)
chr1 (20-58)||(25509208-25509246)
chr1 (20-58)||(27037268-27037306)
chr1 (25-63)||(28885836-28885874)
chr1 (20-58)||(42276161-42276199)
chr1 (20-58)||(45039411-45039449)
chr1 (20-58)||(52431174-52431212)
chr1 (20-57)||(943637-943674)
chr1 (20-57)||(1039381-1039418)
chr1 (20-57)||(1046287-1046324)
chr1 (25-58)||(1047991-1048024)
chr1 (25-58)||(9413330-9413363)
chr1 (20-57)||(15811232-15811269)
chr1 (20-57)||(23541979-23542016)
chr1 (20-57)||(30290265-30290302)
chr1 (20-57)||(36694854-36694891)
chr1 (20-57)||(36710955-36710992)
chr1 (25-58)||(38920238-38920271)
chr1 (25-58)||(39362933-39362966)
chr1 (20-57)||(39363194-39363231)
chr1 (25-58)||(39750120-39750153)
chr1 (20-57)||(43456621-43456658)
chr1 (20-57)||(44649629-44649666)
chr1 (20-57)||(46075867-46075904)
chr1 (20-57)||(49907021-49907058)
chr1 (25-57)||(4280131-4280163)
chr1 (25-65)||(7784259-7784299)
chr1 (23-59)||(12814524-12814560)
chr1 (20-52)||(13343778-13343810)
chr1 (25-57)||(21631112-21631144)
chr1 (25-57)||(23542244-23542276)
chr1 (25-57)||(25227304-25227336)
chr1 (28-60)||(25283868-25283900)
chr1 (25-57)||(27037535-27037567)
chr1 (25-65)||(29437859-29437899)
chr1 (20-52)||(30289862-30289894)
chr1 (25-61)||(35693330-35693366)
chr1 (25-57)||(38613741-38613773)
chr1 (25-57)||(39497698-39497730)
chr1 (25-57)||(41317593-41317625)
chr1 (25-57)||(44646536-44646568)
chr1 (25-57)||(44649894-44649926)
[»] chr5 (30 HSPs)
chr5 (20-58)||(16440930-16440968)
chr5 (20-52)||(4753218-4753250)
chr5 (20-60)||(8949809-8949849)
chr5 (20-60)||(16127256-16127296)
chr5 (25-60)||(9020691-9020726)
chr5 (24-67)||(13661123-13661166)
chr5 (20-58)||(3028012-3028050)
chr5 (20-58)||(6673228-6673266)
chr5 (20-58)||(14913647-14913685)
chr5 (20-58)||(22527691-22527729)
chr5 (20-58)||(23260138-23260176)
chr5 (20-58)||(26894873-26894911)
chr5 (20-58)||(40004409-40004447)
chr5 (25-58)||(186363-186396)
chr5 (20-57)||(1265949-1265986)
chr5 (25-58)||(7940451-7940484)
chr5 (20-57)||(9828393-9828430)
chr5 (25-58)||(14435829-14435862)
chr5 (25-58)||(20142264-20142297)
chr5 (20-65)||(21239091-21239136)
chr5 (20-57)||(23286474-23286511)
chr5 (25-58)||(34662203-34662236)
chr5 (20-57)||(43060411-43060448)
chr5 (25-57)||(4976295-4976327)
chr5 (25-57)||(7951562-7951594)
chr5 (25-57)||(9828658-9828690)
chr5 (25-57)||(10734528-10734560)
chr5 (20-52)||(18251019-18251051)
chr5 (25-57)||(19571944-19571976)
chr5 (20-52)||(39984775-39984807)
[»] scaffold0339 (1 HSPs)
scaffold0339 (20-57)||(7140-7177)
[»] chr8 (39 HSPs)
chr8 (20-65)||(2944272-2944317)
chr8 (20-57)||(18455720-18455757)
chr8 (20-59)||(13153926-13153965)
chr8 (20-59)||(28572044-28572083)
chr8 (20-59)||(28579637-28579676)
chr8 (20-59)||(34568488-34568527)
chr8 (25-60)||(44250856-44250891)
chr8 (23-58)||(44580615-44580650)
chr8 (20-58)||(2152240-2152278)
chr8 (20-58)||(8251933-8251971)
chr8 (20-58)||(12802610-12802648)
chr8 (25-63)||(18111980-18112018)
chr8 (20-58)||(18754143-18754181)
chr8 (25-59)||(23688170-23688204)
chr8 (20-58)||(32675757-32675795)
chr8 (20-57)||(51095-51132)
chr8 (20-57)||(1774342-1774379)
chr8 (20-57)||(5162304-5162341)
chr8 (20-57)||(8951428-8951465)
chr8 (20-57)||(14699452-14699489)
chr8 (20-57)||(17069844-17069881)
chr8 (20-57)||(17578392-17578429)
chr8 (25-58)||(17856781-17856814)
chr8 (20-57)||(18641380-18641417)
chr8 (25-58)||(23487063-23487096)
chr8 (25-58)||(26016568-26016601)
chr8 (20-57)||(28192175-28192212)
chr8 (25-58)||(29279461-29279494)
chr8 (20-57)||(36786467-36786504)
chr8 (20-57)||(39029178-39029215)
chr8 (25-58)||(40530411-40530444)
chr8 (23-59)||(2944011-2944047)
chr8 (25-57)||(6050560-6050592)
chr8 (25-57)||(11798870-11798902)
chr8 (25-57)||(13154193-13154225)
chr8 (25-57)||(42885054-42885086)
chr8 (25-57)||(43653943-43653975)
chr8 (25-57)||(44888680-44888712)
chr8 (25-57)||(45283797-45283829)
[»] chr2 (46 HSPs)
chr2 (20-60)||(11201680-11201720)
chr2 (24-60)||(22182928-22182964)
chr2 (20-60)||(34883848-34883888)
chr2 (25-60)||(12890213-12890248)
chr2 (20-58)||(20252209-20252247)
chr2 (20-58)||(26322293-26322331)
chr2 (20-58)||(34062665-34062703)
chr2 (20-58)||(40607701-40607739)
chr2 (20-58)||(41450515-41450553)
chr2 (20-57)||(2060316-2060353)
chr2 (25-58)||(2199977-2200010)
chr2 (20-57)||(2438225-2438262)
chr2 (33-66)||(3201510-3201543)
chr2 (20-57)||(7116299-7116336)
chr2 (20-57)||(7491844-7491881)
chr2 (20-57)||(8716892-8716929)
chr2 (20-57)||(8912874-8912911)
chr2 (20-57)||(12872986-12873023)
chr2 (25-58)||(16108214-16108247)
chr2 (20-57)||(17408294-17408331)
chr2 (23-60)||(18374426-18374463)
chr2 (25-58)||(23083514-23083547)
chr2 (20-61)||(25624729-25624770)
chr2 (20-57)||(27560206-27560243)
chr2 (20-57)||(28566151-28566188)
chr2 (25-58)||(31751068-31751101)
chr2 (20-57)||(36131028-36131065)
chr2 (25-58)||(39833738-39833771)
chr2 (20-65)||(40680661-40680706)
chr2 (25-58)||(41422511-41422544)
chr2 (25-58)||(41494627-41494660)
chr2 (25-57)||(2200245-2200277)
chr2 (25-57)||(2438490-2438522)
chr2 (25-57)||(3095299-3095331)
chr2 (25-57)||(7492109-7492141)
chr2 (20-52)||(8031006-8031038)
chr2 (25-57)||(13215825-13215857)
chr2 (24-52)||(16456617-16456645)
chr2 (25-57)||(16805531-16805563)
chr2 (25-57)||(16844813-16844845)
chr2 (25-57)||(18374709-18374741)
chr2 (20-60)||(22897388-22897428)
chr2 (25-57)||(22897656-22897688)
chr2 (25-57)||(24345683-24345715)
chr2 (25-57)||(34113791-34113823)
chr2 (25-57)||(45474351-45474383)
[»] scaffold0029 (1 HSPs)
scaffold0029 (20-63)||(51682-51725)
[»] scaffold0020 (1 HSPs)
scaffold0020 (25-60)||(164211-164246)
[»] scaffold0237 (1 HSPs)
scaffold0237 (25-59)||(6614-6648)
[»] scaffold0122 (1 HSPs)
scaffold0122 (20-58)||(12064-12102)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-58)||(47639-47677)
[»] scaffold0674 (1 HSPs)
scaffold0674 (20-57)||(5151-5188)
[»] scaffold0604 (1 HSPs)
scaffold0604 (20-57)||(3782-3819)
[»] scaffold0549 (1 HSPs)
scaffold0549 (20-57)||(10182-10219)
[»] scaffold0250 (1 HSPs)
scaffold0250 (20-61)||(9426-9467)
[»] scaffold0240 (2 HSPs)
scaffold0240 (20-57)||(18497-18534)
scaffold0240 (25-57)||(18761-18793)
[»] scaffold0161 (1 HSPs)
scaffold0161 (20-57)||(3438-3475)
[»] scaffold0107 (1 HSPs)
scaffold0107 (20-57)||(48654-48691)
[»] scaffold0025 (2 HSPs)
scaffold0025 (20-61)||(65637-65678)
scaffold0025 (25-57)||(65378-65410)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-57)||(117846-117883)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-57)||(45672-45709)
[»] scaffold0002 (1 HSPs)
scaffold0002 (25-58)||(355336-355369)


Alignment Details
Target: chr7 (Bit Score: 166; Significance: 1e-88; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 216 - 484
Target Start/End: Complemental strand, 6448385 - 6448119
Alignment:
Q  216 aaacaaattttatataaaatcccaaattcacagatatgtaatttagccattgttatta-cttatgtttttaaaaccttattattacatgttcatttaaaa 314  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||   |||||||||||||||    
T  6448385 aaacaaattttatataaaatcccaaattcatagatatgtaatttagccattgttattatcttatgtttttaaaaccttatta---catgttcatttaaaa 6448289  T
Q  315 ttatctaatgatgcatctaaccatttnnnnnnnnnnnnnnnnnntcgtagagttcatctactgaataagaacttttgattaacggtaggattagtgaagt 414  Q
    ||||||||||||||||| ||||||||                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6448288 ttatctaatgatgcatcaaaccatttaaaaaaattataaaaaaatcgtagagttcatctactgaataagaacttttgattaacggtaggattagtgaagt 6448189  T
Q  415 tcattgttaaaaattatttattagtcggggtaactaatctcagagttacttcctgagtaaatgaatcacc 484  Q
    ||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||    
T  6448188 tcaatgttaaaaattatttattagtcgaggtaacttatctcagagttacttccagagtaaattaatcacc 6448119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 6448570 - 6448430
Alignment:
Q  76 tagtttattatgtttcttaaatttctccacaaacggtatcttcctacattgatagacttattatctcagaatacccccattctctattgttgatgaaaat 175  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6448570 tagtttattatgtttcttaaatttctccgcaaacggtatcttcctacattgatagacttattatctcagaata-ccccattctctattgttgatgaaaat 6448472  T
Q  176 catactttattatttatcattgaaacctaagaatttcacgaa 217  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  6448471 catactttattatttatcattgtaacctaagagtttcacgaa 6448430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 31458034 - 31457997
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||||||||    
T  31458034 ttctcaaaagggtcttataattagggacggaggaagta 31457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 42541863 - 42541899
Alignment:
Q  24 taaaagggtcttataattagggacggaggaagtattt 60  Q
    ||||||||||||||||||||||||||||| |||||||    
T  42541863 taaaagggtcttataattagggacggaggtagtattt 42541899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 1574753 - 1574718
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||||| |||||    
T  1574753 ttaaaagggtcttataattagggacggaggtagtat 1574718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 32814470 - 32814431
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  32814470 ttctcaaaagggtcttataattagggacggagggagtatt 32814431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 33381578 - 33381613
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    |||||||||||||||||||||||||||| |||||||    
T  33381578 aaaagggtcttataattagggacggaggtagtattt 33381613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 33858866 - 33858905
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  33858866 ttctcaaaagggtcttataattagggacggagggagtatt 33858905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 34012517 - 34012556
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  34012517 ttctcaaaagggtcttataattagggacggaggtagtatt 34012556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 39871613 - 39871652
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  39871613 ttctcaaaagggtcttataattagggacggagggagtatt 39871652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 2290016 - 2290054
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  2290016 ttctcaaaagggtcttataattagggacggaggtagtat 2290054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 29286037 - 29286075
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  29286037 ttctcaaaagggtcttataattagggacggagggagtat 29286075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 36698131 - 36698169
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  36698131 ttctcaaaagggtcttataattagggacggagggagtat 36698169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 38858335 - 38858297
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  38858335 ttctcaaaagggtcttataattagggacggagggagtat 38858297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 45907277 - 45907239
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgtt 63  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  45907277 aaaagggtattataattagggacggagggagtatttgtt 45907239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 19920600 - 19920563
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  19920600 ttctcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 20075112 - 20075145
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  20075112 aaaagggtcttataattagggacggagggagtat 20075145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 21295188 - 21295151
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  21295188 ttctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 26255133 - 26255096
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  26255133 ttctcaaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 27813528 - 27813495
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  27813528 aaaagggtcttataattagggacggaggtagtat 27813495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 28060982 - 28061015
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  28060982 aaaagggtcttataattagggacggagggagtat 28061015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 32872375 - 32872412
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  32872375 ttctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 38858563 - 38858596
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||| |||||||||||||||||    
T  38858563 aaaagggtcttataataagggacggaggaagtat 38858596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 39197755 - 39197718
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  39197755 ttctcaaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 41026096 - 41026133
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  41026096 ttctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 41252361 - 41252398
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  41252361 ttctcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 48521066 - 48521029
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  48521066 ttctcaaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 9036701 - 9036669
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||| ||||||||||||    
T  9036701 aaaagggtcttataattaggaacggaggaagta 9036669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 9140533 - 9140573
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||||||||  |||||||    
T  9140533 ttctcaaaagggtcttataattagggacggagatagtattt 9140573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 30534737 - 30534697
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  30534737 aaaagtgtcttataattagggacggaggtagtagttgtttt 30534697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 31581709 - 31581677
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  31581709 aaaagggtcttataattagggacggaggtagta 31581677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 31769332 - 31769364
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    |||| ||||||||||||||||||||||||||||    
T  31769332 ttctcaaaagggtcttataattagggacggagg 31769364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 32118168 - 32118200
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  32118168 aaaagggtcttataattagggacggaggtagta 32118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 36646637 - 36646677
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  36646637 ttctcaaaagggtcttctaattagggacggagggagtattt 36646677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 38428412 - 38428444
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  38428412 aaaagggtcttataattagggacggagggagta 38428444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 40300262 - 40300230
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  40300262 aaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 43978197 - 43978159
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43978197 ttcttaaaagggtcttataattagggacggaggaagtat 43978159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 12050392 - 12050437
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||    
T  12050392 ttctcaaaagggtcttataattagggacggagggagtatttttttt 12050437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 26058583 - 26058546
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||||||||    
T  26058583 ttctcaaaagggtcttataattagggacggaggaagta 26058546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 47066971 - 47066934
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||||||||    
T  47066971 ttctcaaaagggtcttataattagggacggaggaagta 47066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 24087335 - 24087375
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  24087335 ttctcaaaagggtcttataattagggacggaggtagtattt 24087375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 25149122 - 25149162
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  25149122 ttctcaaaagggtcttataattagggacggagggagtattt 25149162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 42801553 - 42801513
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  42801553 aaaagggtcttataattagggacggaggtagtatttatttt 42801513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 48904266 - 48904302
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||||| ||||||    
T  48904266 ttaaaagggtcttataattagggacggaggtagtatt 48904302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4759351 - 4759390
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  4759351 ttctcaaaagggtcttataattagggacggaggtagtatt 4759390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 7181387 - 7181348
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  7181387 ttctcaaaagggtcttataattagggacggagggagtatt 7181348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 14428874 - 14428909
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    |||||||||||||||||||||||||||| |||||||    
T  14428874 aaaagggtcttataattagggacggagggagtattt 14428909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 22103929 - 22103968
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  22103929 ttctcaaaagggtcttataattagggacggagggagtatt 22103968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 37728750 - 37728711
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  37728750 ttctcaaaagggtcttataattagggacggagggagtatt 37728711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 41392880 - 41392919
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  41392880 ttctcaaaagggtcttataattagggacggaggtagtatt 41392919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 44543819 - 44543780
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  44543819 ttctcaaaagggtcttataattagggacggagggagtatt 44543780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 51284062 - 51284101
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  51284062 ttctcaaaagggtcttataattagggacggagggagtatt 51284101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 10015794 - 10015828
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  10015794 aaaagggtcttataattagggacggaggtagtatt 10015828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 19897841 - 19897875
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  19897841 aaaagggtcttataattagggacggaggtagtatt 19897875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 20862462 - 20862496
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  20862462 aaaagggtcttataattagggacggagggagtatt 20862496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 26806147 - 26806113
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  26806147 aaaagggtcttataattagggacggagggagtatt 26806113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 28673294 - 28673340
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgttttg 66  Q
    |||| |||||| ||||||||||||||||||||| ||||||| |||||    
T  28673294 ttctcaaaaggatcttataattagggacggaggtagtatttcttttg 28673340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 35868083 - 35868121
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  35868083 ttctcaaaagggtcttataattagggacggagggagtat 35868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 43868140 - 43868102
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  43868140 ttctcaaaagggtcttataattagggacggagggagtat 43868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 46845492 - 46845530
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  46845492 ttctcaaaagggtcttataattagggacggaggtagtat 46845530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 50647716 - 50647682
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  50647716 aaaagggtcttataattagggacggagggagtatt 50647682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 1111648 - 1111693
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||| |||||||||||||||||||||||||||  ||||||| ||||    
T  1111648 ttctcaaaagggtcttataattagggacggagatagtatttatttt 1111693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 7251282 - 7251319
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  7251282 ttcttaaaggggtcttataattagggacggagggagta 7251319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 8321962 - 8321925
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  8321962 ttctcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 9499497 - 9499534
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  9499497 ttctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 10220970 - 10220933
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  10220970 ttctcaaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 12906418 - 12906451
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  12906418 aaaagggtcttataattagggacggaggtagtat 12906451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 14428647 - 14428610
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  14428647 ttctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 21756523 - 21756486
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  21756523 ttctcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 26593765 - 26593802
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  26593765 ttctcaaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 28875256 - 28875289
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  28875256 aaaagggtcttataattagggacggaggtagtat 28875289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 30819915 - 30819870
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||| |||||||||||||| ||||||||||||| |||||| |||||    
T  30819915 ttctcaaaagggtcttatagttagggacggaggtagtattagtttt 30819870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 33868713 - 33868746
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  33868713 aaaagggtcttataattagggacggagggagtat 33868746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 45252810 - 45252773
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  45252810 ttctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 46049986 - 46050023
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  46049986 ttctcaaaagggtcttataattagggacggagggagta 46050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 46703064 - 46703031
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagga 53  Q
    |||| |||||||||||||||||||||||||||||    
T  46703064 ttctcaaaagggtcttataattagggacggagga 46703031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 4024084 - 4024052
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  4024084 aaaagggtcttataattagggacggagggagta 4024052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 4024316 - 4024348
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  4024316 aaaagggtcttataattagggacggagggagta 4024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 4759120 - 4759088
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  4759120 aaaagggtcttataattagggacggaggtagta 4759088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 8547170 - 8547206
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttg 61  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  8547170 aaaagggtcttatacttagggacggaggtagtatttg 8547206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 9780011 - 9779979
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  9780011 aaaagggtcttataattagggacggagggagta 9779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 15996778 - 15996810
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  15996778 aaaagggtcttataattagggacggaggtagta 15996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 16435009 - 16434977
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  16435009 aaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 20918256 - 20918224
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    |||| ||||||||||||||||||||||||||||    
T  20918256 ttctcaaaagggtcttataattagggacggagg 20918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 20927218 - 20927186
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    |||| ||||||||||||||||||||||||||||    
T  20927218 ttctcaaaagggtcttataattagggacggagg 20927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 31531416 - 31531448
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  31531416 aaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 36005769 - 36005801
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  36005769 aaaagggtcttataattagggacggagggagta 36005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 45513642 - 45513674
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  45513642 aaaagggtcttataattagggacggaggtagta 45513674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 48902711 - 48902747
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  48902711 ttaagagggtcttataattagggacggaggtagtatt 48902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 52059017 - 52058985
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  52059017 aaaagggtcttataattagggacggagggagta 52058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 56432555 - 56432511
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgttt 64  Q
    |||| |||||||||||||||||||||||||||| |||||||||||    
T  56432555 ttctcaaaagggtcttataattagggacggaggtagtatttgttt 56432511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 45742806 - 45742848
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgt 62  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  45742806 ttctcaaaagggtcttataattagggacggagggagtatttgt 45742848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 43387993 - 43388030
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||||||||    
T  43387993 ttctcaaaagggtcttataattagggacggaggaagta 43388030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 47228728 - 47228765
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||||||||    
T  47228728 ttctcaaaagggtcttataattagggacggaggaagta 47228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 49793128 - 49793087
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttg 61  Q
    |||| |||||||||||||||||||||||||||| ||||||||    
T  49793128 ttctcaaaagggtcttataattagggacggaggtagtatttg 49793087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 53277185 - 53277222
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  53277185 ttcttaaaagggtcttataattagggacggagggagta 53277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 20747435 - 20747470
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    |||||||||||||||||||||||||||| |||||||    
T  20747435 aaaagggtcttataattagggacggagggagtattt 20747470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 21265254 - 21265219
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||||| |||||    
T  21265254 ttaaaagggtcttataattagggacggaggtagtat 21265219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 30523798 - 30523763
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||||| |||||    
T  30523798 ttaaaagggtcttataattagggacggaggtagtat 30523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 4035862 - 4035824
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  4035862 ttctcaaaagggtcttataattagggacggagggagtat 4035824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 4416002 - 4415964
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  4416002 ttctcaaaagggtcttataattagggacggaggtagtat 4415964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 20455181 - 20455219
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  20455181 ttctcaaaagggtcttataattagggacggaggtagtat 20455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 28501386 - 28501424
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  28501386 ttctcaaaagggtcttataattagggacggaggtagtat 28501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 46950029 - 46949991
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  46950029 ttctcaaaagggtcttataattagggacggaggtagtat 46949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 5375557 - 5375594
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  5375557 ttctcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 5743659 - 5743696
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  5743659 ttctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 6807466 - 6807425
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttg 61  Q
    |||| ||||||||||||||||||||||| |||| ||||||||    
T  6807466 ttctcaaaagggtcttataattagggacagagggagtatttg 6807425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 9328240 - 9328277
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  9328240 ttctcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 14794022 - 14794059
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  14794022 ttcttaaaagggtcttataattagagacggaggtagta 14794059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 18872749 - 18872716
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  18872749 aaaagggtcttataattagggacggaggtagtat 18872716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 25124246 - 25124283
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  25124246 ttctcaaaagggtcttataattagggacggaggtagta 25124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 29520164 - 29520201
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  29520164 ttctcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 30771565 - 30771528
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  30771565 ttctcaaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 31937113 - 31937076
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  31937113 ttctcaaaagggtcttataattagggacggaggtagta 31937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 32032993 - 32033030
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  32032993 ttctcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 32899223 - 32899256
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  32899223 aaaagggtcttataattagggacggaggtagtat 32899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 33413555 - 33413518
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  33413555 ttctcaaaagggtcttataattagggacggagggagta 33413518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 34273219 - 34273256
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  34273219 ttctcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 39144441 - 39144404
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  39144441 ttcttaaaaggatcttataattagggacggagggagta 39144404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 44294826 - 44294789
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  44294826 ttctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 47806897 - 47806860
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  47806897 ttctcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 49373693 - 49373730
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  49373693 ttctcaaaagggtcttataattagggacggaggtagta 49373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 52978019 - 52977982
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  52978019 ttctcaaaagggtcttataattagggacggagggagta 52977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 53564356 - 53564393
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  53564356 ttctcaaaagggtcttataattagggacggaggtagta 53564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 4036090 - 4036122
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  4036090 aaaagggtcttataattagggacggagggagta 4036122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 4549661 - 4549629
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  4549661 aaaagggtcttataattagggacggagggagta 4549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 7698474 - 7698506
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  7698474 aaaagggtcttataattagggacggaggtagta 7698506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 20286026 - 20286058
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||| ||||||||||||||||||||||||||    
T  20286026 aaaaggatcttataattagggacggaggaagta 20286058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 20391442 - 20391474
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  20391442 aaaagggtcttataattagggacggagggagta 20391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 20768216 - 20768256
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    ||||||||||||| ||||||||| ||||||||| |||||||    
T  20768216 ttcttaaaagggttttataattaaggacggaggtagtattt 20768256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 26626007 - 26626039
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  26626007 aaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 29014096 - 29014064
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  29014096 aaaagggtcttataattagggacggagggagta 29014064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 29508629 - 29508597
Alignment:
Q  26 aaagggtcttataattagggacggaggaagtat 58  Q
    ||||||||||||||||||||||||||| |||||    
T  29508629 aaagggtcttataattagggacggaggtagtat 29508597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 35675925 - 35675957
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  35675925 aaaagggtcttataattagggacggagggagta 35675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 36391891 - 36391851
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||| ||||||||| |||||||    
T  36391891 ttctcaaaagggtcttataattaaggacggagggagtattt 36391851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 39670991 - 39671023
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  39670991 aaaagggtcttataattagggacggaggtagta 39671023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 41620551 - 41620519
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    |||| ||||||||||||||||||||||||||||    
T  41620551 ttctcaaaagggtcttataattagggacggagg 41620519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 45097165 - 45097205
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||||||| | |||||||    
T  45097165 ttctcaaaagggtcttataattagggacggatggagtattt 45097205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 48030350 - 48030310
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||| ||||| |||||||    
T  48030350 ttctcaaaagggtcttataattagggatggagggagtattt 48030310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 54877789 - 54877753
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtatt 59  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  54877789 ttaaaagggtcctataattagggacggaggtagtatt 54877753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 55563132 - 55563164
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  55563132 aaaagggtcttataattagggacggaggtagta 55563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 55632031 - 55631999
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  55632031 aaaagggtcttataattagggacggagggagta 55631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 1451 - 1490
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgttt 64  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  1451 aaaagggtcttataattagggacggaggtagtatttgttt 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 259122 - 259165
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtt 63  Q
    |||| |||||||||||||||||||||||||||| ||||||||||    
T  259122 ttctcaaaagggtcttataattagggacggagggagtatttgtt 259165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 16272973 - 16273008
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    ||||||||||||||||||||||||||||||||||||    
T  16272973 aaaagggtcttataattagggacggaggaagtattt 16273008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 11847608 - 11847570
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  11847608 ttcttaaaaggatcttataattagggacggaggaagtat 11847570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 25197189 - 25197144
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||    
T  25197189 ttctcaaaaggatcttataattagggacggagggagtatttgtttt 25197144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 34915543 - 34915588
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||    
T  34915543 ttctcaaaagggtcttataattagggacggaggtagtatttttttt 34915588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 12144041 - 12144077
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||||| ||||||    
T  12144041 ttaaaagggtcttataattagggacggagggagtatt 12144077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 16122519 - 16122559
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  16122519 aaaagggtcttataattagggacggaggtagtatttttttt 16122559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 15498666 - 15498627
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  15498666 ttctcaaaagggtcttataattagggacggaggtagtatt 15498627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 25045643 - 25045682
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  25045643 ttctcaaaagggtcttataattagggacggaggtagtatt 25045682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 402621 - 402659
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  402621 ttctcaaaagggtcttataattagggacggaggtagtat 402659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 1147267 - 1147297
Alignment:
Q  20 ttcttaaaagggtcttataattagggacgga 50  Q
    |||||||||||||||||||||||||||||||    
T  1147267 ttcttaaaagggtcttataattagggacgga 1147297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 4844437 - 4844399
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  4844437 ttctcaaaagggtcttataattagggacggagggagtat 4844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 12143815 - 12143777
Alignment:
Q  21 tcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  12143815 tcttaaaagtgtcttataattagggacggagggagtatt 12143777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 13321331 - 13321365
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  13321331 aaaagggtcttataattagggacggaggtagtatt 13321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 13901678 - 13901640
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  13901678 ttctcaaaagggtcttataattagggacggaggtagtat 13901640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 23604497 - 23604459
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  23604497 ttctcaaaagggtcttataattagggacggaggtagtat 23604459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 30248684 - 30248646
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  30248684 ttctcaaaagggtcttataattagggacggagggagtat 30248646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 231105 - 231142
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  231105 ttctcaaaagggtcttataattagggacggagggagta 231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2090695 - 2090658
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  2090695 ttctcaaaagggtcttataattagggacggaggtagta 2090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 8743225 - 8743188
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  8743225 ttctcaaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 34301832 - 34301869
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  34301832 ttctcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 34741731 - 34741764
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  34741731 aaaagggtcttataattagggacggagggagtat 34741764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 9038674 - 9038642
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  9038674 aaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 9388561 - 9388529
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  9388561 aaaagggtcttataattagggacggagggagta 9388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 11200631 - 11200591
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  11200631 ttctcaaaaggctcttataattagggacggaggtagtattt 11200591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 11847837 - 11847869
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  11847837 aaaagggtcttataattagggacggagggagta 11847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 13866625 - 13866593
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  13866625 aaaagggtcttataattagggacggaggtagta 13866593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 17227527 - 17227559
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    |||| ||||||||||||||||||||||||||||    
T  17227527 ttctcaaaagggtcttataattagggacggagg 17227559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 22852332 - 22852368
Alignment:
Q  21 tcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  22852332 tcttaaaatggtcttataattagggacggaggtagta 22852368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 23398144 - 23398176
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  23398144 aaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 31091477 - 31091445
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  31091477 aaaagggtcttataattagggacggaggtagta 31091445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000005; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 11907230 - 11907269
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11907230 ttcttaaaagggtcttataattagagacggaggaagtatt 11907269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 2279985 - 2279951
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||||||||||    
T  2279985 aaaagggtcttataattagggacggaggaagtatt 2279951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 52602028 - 52601990
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  52602028 ttcttaaaagggtcttataattagggacggagggagtat 52601990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 45039677 - 45039709
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||||||||    
T  45039677 aaaagggtcttataattagggacggaggaagta 45039709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 7763749 - 7763788
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  7763749 ttctcaaaagggtcttataattagggacggaggtagtatt 7763788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 11741434 - 11741395
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  11741434 ttctcaaaagggtcttataattagggacggagggagtatt 11741395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 17483765 - 17483730
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    |||||||||||||||||||||||||||| |||||||    
T  17483765 aaaagggtcttataattagggacggaggtagtattt 17483730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 35984434 - 35984395
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgttt 64  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  35984434 aaaagggtcttataattagggacggaaggagtatttgttt 35984395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 37951949 - 37951988
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  37951949 ttctcaaaagggtcttataattagggacggagggagtatt 37951988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 39497470 - 39497431
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  39497470 ttctcaaaagggtcttataattagggacggagggagtatt 39497431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 4102714 - 4102752
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  4102714 ttctcaaaagggtcttataattagggacggagggagtat 4102752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 5765995 - 5766029
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  5765995 aaaagggtcttataattagggacggaggtagtatt 5766029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 9202277 - 9202243
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  9202277 aaaagggtcttataattagggacggagggagtatt 9202243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 25509246 - 25509208
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  25509246 ttctcaaaagggtcttataattagggacggaggtagtat 25509208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 27037306 - 27037268
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  27037306 ttctcaaaagggtcttataattagggacggaggtagtat 27037268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 28885874 - 28885836
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgtt 63  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  28885874 aaaagggtcttataattagggacggaggtagtatatgtt 28885836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 42276161 - 42276199
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  42276161 ttctcaaaagggtcttataattagggacggaggtagtat 42276199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 45039449 - 45039411
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  45039449 ttctcaaaagggtcttataattagggacggagggagtat 45039411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 52431174 - 52431212
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  52431174 ttctcaaaagggtcttataattagggacggagggagtat 52431212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 943637 - 943674
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  943637 ttctcaaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 1039381 - 1039418
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  1039381 ttctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 1046287 - 1046324
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  1046287 ttctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 1048024 - 1047991
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  1048024 aaaagggtcttataattagggacggagggagtat 1047991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 9413330 - 9413363
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  9413330 aaaagggtcttataattagggacggaggtagtat 9413363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 15811232 - 15811269
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  15811232 ttctcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 23542016 - 23541979
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  23542016 ttctcaaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 30290302 - 30290265
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  30290302 ttctcaaaagggtcttataattagggacggagggagta 30290265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 36694891 - 36694854
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  36694891 ttctcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 36710992 - 36710955
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  36710992 ttctcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 38920271 - 38920238
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  38920271 aaaagggtcttataattagggacggagggagtat 38920238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 39362966 - 39362933
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  39362966 aaaagggtcttataattagggacggagggagtat 39362933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 39363194 - 39363231
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  39363194 ttctcaaaagggtcttataattagggacggagggagta 39363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 39750153 - 39750120
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  39750153 aaaagggtcttataattagggacggagggagtat 39750120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 43456621 - 43456658
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  43456621 ttctcaaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 44649666 - 44649629
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  44649666 ttctcaaaagggtcttataattagggacggagggagta 44649629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 46075867 - 46075904
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  46075867 ttctcaaaagggtcttataattagggacggagggagta 46075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 49907058 - 49907021
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  49907058 ttctcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 4280131 - 4280163
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  4280131 aaaagggtcttataattagggacggaggtagta 4280163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 7784259 - 7784299
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  7784259 aaaagagtcttataattagggacggagggagtatttttttt 7784299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 12814560 - 12814524
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtatt 59  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  12814560 ttaaaagggtcctataattagggacggaggtagtatt 12814524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 13343810 - 13343778
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    |||| ||||||||||||||||||||||||||||    
T  13343810 ttctcaaaagggtcttataattagggacggagg 13343778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 21631112 - 21631144
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  21631112 aaaagggtcttataattagggacggaggtagta 21631144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 23542244 - 23542276
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  23542244 aaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 25227336 - 25227304
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  25227336 aaaagggtcttataattagggacggaggtagta 25227304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 25283900 - 25283868
Alignment:
Q  28 agggtcttataattagggacggaggaagtattt 60  Q
    ||||||||||||||||||||||||| |||||||    
T  25283900 agggtcttataattagggacggaggtagtattt 25283868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 27037535 - 27037567
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  27037535 aaaagggtcttataattagggacggaggtagta 27037567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 29437859 - 29437899
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  29437859 aaaagagtcttataattagggacggaggtagtacttgtttt 29437899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 30289862 - 30289894
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    |||| ||||||||||||||||||||||||||||    
T  30289862 ttctcaaaagggtcttataattagggacggagg 30289894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 35693330 - 35693366
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttg 61  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  35693330 aaaagggtcctataattagggacggaggtagtatttg 35693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 38613741 - 38613773
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  38613741 aaaagggtcttataattagggacggaggtagta 38613773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 39497698 - 39497730
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  39497698 aaaagggtcttataattagggacggagggagta 39497730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 41317625 - 41317593
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  41317625 aaaagggtcttataattagggacggaggtagta 41317593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 44646536 - 44646568
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  44646536 aaaagggtcttataattagggacggagggagta 44646568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 44649894 - 44649926
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  44649894 aaaagggtcttataattagggacggagggagta 44649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 16440968 - 16440930
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  16440968 ttcttaaaagggtcttataattagggacggagggagtat 16440930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 4753218 - 4753250
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    |||||||||||||||||||||||||||||||||    
T  4753218 ttcttaaaagggtcttataattagggacggagg 4753250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 8949849 - 8949809
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  8949849 ttctcaaaagggtcttataattagggacggaggtagtattt 8949809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 16127296 - 16127256
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  16127296 ttctcaaaagggtcttataattagggacggagggagtattt 16127256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 9020726 - 9020691
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    |||||||||||||||||||||||||||| |||||||    
T  9020726 aaaagggtcttataattagggacggagggagtattt 9020691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 13661123 - 13661166
Alignment:
Q  24 taaaagggtcttataattagggacggaggaagtatttgttttga 67  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||    
T  13661123 taaaaaggtcttataattagggacggagggagtatatgttttga 13661166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 3028050 - 3028012
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  3028050 ttctcaaaagggtcttataattagggacggaggtagtat 3028012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 6673228 - 6673266
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  6673228 ttctcaaaagggtcttataattagggacggagggagtat 6673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 14913685 - 14913647
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  14913685 ttctcaaaagggtcttataattagggacggagggagtat 14913647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 22527729 - 22527691
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  22527729 ttctcaaaagggtcttataattagggacggagggagtat 22527691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 23260138 - 23260176
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  23260138 ttctcaaaagggtcttataattagggacggaggtagtat 23260176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 26894873 - 26894911
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  26894873 ttctcaaaagggtcttataattagggacggagggagtat 26894911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 40004409 - 40004447
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  40004409 ttctcaaaagggtcttataattagggacggagggagtat 40004447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 186363 - 186396
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  186363 aaaagggtcttataattagggacggagggagtat 186396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 1265986 - 1265949
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  1265986 ttctcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 7940484 - 7940451
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  7940484 aaaagggtcttataattagggacggaggtagtat 7940451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 9828430 - 9828393
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  9828430 ttctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 14435862 - 14435829
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  14435862 aaaagggtcttataattagggacggaggtagtat 14435829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 20142264 - 20142297
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  20142264 aaaagggtcttataattagggacggaggtagtat 20142297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 21239136 - 21239091
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||| ||||||||||| |||||||||||||||| ||||||| ||||    
T  21239136 ttctcaaaagggtcttctaattagggacggaggtagtatttttttt 21239091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 23286474 - 23286511
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  23286474 ttctcaaaagggtcttataattagggacggaggtagta 23286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 34662236 - 34662203
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  34662236 aaaagggtcttataattagggacggagggagtat 34662203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 43060411 - 43060448
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  43060411 ttctcaaaagggtcttataattagggacggaggtagta 43060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 4976295 - 4976327
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  4976295 aaaagggtcttataattagggacggaggtagta 4976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 7951594 - 7951562
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  7951594 aaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 9828658 - 9828690
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  9828658 aaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 10734528 - 10734560
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  10734528 aaaagggtcttataattagggacggagggagta 10734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 18251051 - 18251019
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    ||||||||||||||||||||||| |||||||||    
T  18251051 ttcttaaaagggtcttataattaaggacggagg 18251019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 19571944 - 19571976
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  19571944 aaaagggtcttataattagggacggaggtagta 19571976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 39984807 - 39984775
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    ||||||||||||||||||||||| |||||||||    
T  39984807 ttcttaaaagggtcttataattaaggacggagg 39984775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 7140 - 7177
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||||||||    
T  7140 ttctcaaaagggtcttataattagggacggaggaagta 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 2944272 - 2944317
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||    
T  2944272 ttctcaaaagggtcttataattagggacggagggagtaattgtttt 2944317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 18455757 - 18455720
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18455757 ttcttaaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 13153965 - 13153926
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  13153965 ttctcaaaagggtcttataattagggacggagggagtatt 13153926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 28572083 - 28572044
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  28572083 ttctcaaaagggtcttataattagggacggagggagtatt 28572044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 28579676 - 28579637
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  28579676 ttctcaaaagggtcttataattagggacggagggagtatt 28579637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 34568527 - 34568488
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatt 59  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  34568527 ttctcaaaagggtcttataattagggacggagggagtatt 34568488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 44250891 - 44250856
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    |||||||||||||||||||||||||||| |||||||    
T  44250891 aaaagggtcttataattagggacggagggagtattt 44250856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 44580650 - 44580615
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||||| |||||    
T  44580650 ttaaaagggtcttataattagggacggaggtagtat 44580615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 2152240 - 2152278
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  2152240 ttctcaaaagggtcttataattagggacggaggtagtat 2152278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 8251933 - 8251971
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  8251933 ttctcaaaagggtcttataattagggacggagggagtat 8251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 12802648 - 12802610
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  12802648 ttctcaaaagggtcttataattagggacggaggtagtat 12802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 18111980 - 18112018
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatttgtt 63  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  18111980 aaaagggtcttataattagggacggaggtagtatatgtt 18112018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 18754181 - 18754143
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  18754181 ttctcaaaagggtcttataattagggacggagggagtat 18754143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 23688170 - 23688204
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  23688170 aaaagggtcttataattagggacggaggtagtatt 23688204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 32675757 - 32675795
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  32675757 ttctcaaaagggtcttataattagggacggagggagtat 32675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 51095 - 51132
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  51095 ttctcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 1774379 - 1774342
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  1774379 ttctcaaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 5162341 - 5162304
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  5162341 ttctcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 8951428 - 8951465
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  8951428 ttctcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 14699489 - 14699452
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  14699489 ttctcaaaaggatcttataattagggacggaggaagta 14699452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 17069844 - 17069881
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  17069844 ttctcaaaagggtcttataattagggacggaggtagta 17069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 17578429 - 17578392
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  17578429 ttctcaaaagggtcttataattagggacggaggtagta 17578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 17856781 - 17856814
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  17856781 aaaagggtcttataattagggacggagggagtat 17856814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 18641380 - 18641417
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  18641380 ttctcaaaagggtcttataattagggacggaggtagta 18641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 23487096 - 23487063
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  23487096 aaaagggtcttataattagggacggaggtagtat 23487063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 26016601 - 26016568
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  26016601 aaaagggtcttataattagggacggagggagtat 26016568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 28192175 - 28192212
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  28192175 ttctcaaaagggtcttataattagggacggagggagta 28192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 29279461 - 29279494
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  29279461 aaaagggtcttataattagggacggagggagtat 29279494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 36786504 - 36786467
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  36786504 ttctcaaaaaggtcttataattagggacggaggaagta 36786467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 39029215 - 39029178
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  39029215 ttctcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 40530411 - 40530444
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  40530411 aaaagggtcttataattagggacggagggagtat 40530444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 2944047 - 2944011
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtatt 59  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  2944047 ttaaaagggtcctataattagggacggagggagtatt 2944011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 6050560 - 6050592
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  6050560 aaaagggtcttataattagggacggaggtagta 6050592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 11798870 - 11798902
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  11798870 aaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 13154193 - 13154225
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  13154193 aaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 42885086 - 42885054
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  42885086 aaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 43653975 - 43653943
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  43653975 aaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 44888712 - 44888680
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  44888712 aaaagggtcttataattagggacggaggtagta 44888680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 45283797 - 45283829
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  45283797 aaaagggtcttataattagggacggaggtagta 45283829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 11201720 - 11201680
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  11201720 ttctcaaaagggtcttataattagggacggagggagtattt 11201680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 22182928 - 22182964
Alignment:
Q  24 taaaagggtcttataattagggacggaggaagtattt 60  Q
    ||||||||||||||||||||||||||||| |||||||    
T  22182928 taaaagggtcttataattagggacggagggagtattt 22182964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 34883848 - 34883888
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  34883848 ttctcaaaagggtcttataattagggacggagggagtattt 34883888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 12890213 - 12890248
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    |||||||||||||||||||||||||||| |||||||    
T  12890213 aaaagggtcttataattagggacggaggtagtattt 12890248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 20252247 - 20252209
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  20252247 ttctcaaaagggtcttataattagggacggagggagtat 20252209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 26322293 - 26322331
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  26322293 ttctcaaaagggtcttataattagggacggaggtagtat 26322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 34062665 - 34062703
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  34062665 ttctcaaaagggtcttataattagggacggagggagtat 34062703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 40607739 - 40607701
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  40607739 ttctcaaaagggtcttataattagggacggagggagtat 40607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 41450553 - 41450515
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  41450553 ttctcaaaagggtcttataattagggacggagggagtat 41450515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2060353 - 2060316
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  2060353 ttctcaaaagggtcttataattagggacggaggtagta 2060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 2200010 - 2199977
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  2200010 aaaagggtcttataattagggacggaggtagtat 2199977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2438262 - 2438225
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  2438262 ttctcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 3201510 - 3201543
Alignment:
Q  33 cttataattagggacggaggaagtatttgttttg 66  Q
    ||||||||| ||||||||||||||||||||||||    
T  3201510 cttataatttgggacggaggaagtatttgttttg 3201543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 7116299 - 7116336
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  7116299 ttctcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 7491881 - 7491844
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  7491881 ttctcaaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 8716892 - 8716929
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  8716892 ttctcaaaagggtcttataattagggacggagggagta 8716929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 8912874 - 8912911
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  8912874 ttctcaaaagggtcttataattagggacggaggtagta 8912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 12873023 - 12872986
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  12873023 ttcttaaaagggtcttataattagagacggaggtagta 12872986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 16108247 - 16108214
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  16108247 aaaagggtcttataattagggacggagggagtat 16108214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 17408294 - 17408331
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  17408294 ttctcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 18374463 - 18374426
Alignment:
Q  23 ttaaaagggtcttataattagggacggaggaagtattt 60  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  18374463 ttaaaagggccttataattagggacggaggtagtattt 18374426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 23083547 - 23083514
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  23083547 aaaagggtcttataattagggacggaggtagtat 23083514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 25624770 - 25624729
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttg 61  Q
    |||| |||| ||||||||||||||||||||||| ||||||||    
T  25624770 ttctcaaaaaggtcttataattagggacggagggagtatttg 25624729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 27560243 - 27560206
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  27560243 ttctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 28566188 - 28566151
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  28566188 ttctcaaaagggtcttataattagggacggaggtagta 28566151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 31751101 - 31751068
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  31751101 aaaagggtcttataattagggacggaggtagtat 31751068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 36131028 - 36131065
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  36131028 ttctcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 39833771 - 39833738
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  39833771 aaaagggtcttataattagggacggagggagtat 39833738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 40680661 - 40680706
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtttt 65  Q
    |||||||||| || ||||||||||||||||||| ||||||| ||||    
T  40680661 ttcttaaaagagttttataattagggacggaggtagtatttatttt 40680706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 41422544 - 41422511
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  41422544 aaaagggtcttataattagggacggaggtagtat 41422511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 41494627 - 41494660
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  41494627 aaaagggtcttataattagggacggaggtagtat 41494660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 2200245 - 2200277
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  2200245 aaaagggtcttataattagggacggaggtagta 2200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 2438490 - 2438522
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  2438490 aaaagggtcttataattagggacggagggagta 2438522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 3095331 - 3095299
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  3095331 aaaagggtcttataattagggacggaggtagta 3095299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 7492109 - 7492141
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  7492109 aaaagggtcttataattagggacggagggagta 7492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 8031006 - 8031038
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggagg 52  Q
    ||||||||||||||||||||||||| |||||||    
T  8031006 ttcttaaaagggtcttataattaggaacggagg 8031038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 13215825 - 13215857
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  13215825 aaaagggtcttataattagggacggaggtagta 13215857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 16456645 - 16456617
Alignment:
Q  24 taaaagggtcttataattagggacggagg 52  Q
    |||||||||||||||||||||||||||||    
T  16456645 taaaagggtcttataattagggacggagg 16456617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 16805563 - 16805531
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    ||||| |||||||||||||||||||||||||||    
T  16805563 aaaagagtcttataattagggacggaggaagta 16805531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 16844845 - 16844813
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    ||||| |||||||||||||||||||||||||||    
T  16844845 aaaagagtcttataattagggacggaggaagta 16844813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 18374709 - 18374741
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  18374709 aaaagggtcttataattagggacggaggtagta 18374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 22897428 - 22897388
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtattt 60  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  22897428 ttctcaaaaggatcttataattagggacggagggagtattt 22897388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 22897656 - 22897688
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  22897656 aaaagggtcttataattagggacggagggagta 22897688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 24345683 - 24345715
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  24345683 aaaagggtcttataattagggacggaggtagta 24345715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 34113791 - 34113823
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  34113791 aaaagggtcttataattagggacggagggagta 34113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 45474383 - 45474351
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  45474383 aaaagggtcttataattagggacggagggagta 45474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 51682 - 51725
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttgtt 63  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||    
T  51682 ttctcaaaagggtcttataattagggacggagggagtatatgtt 51725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 164246 - 164211
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtattt 60  Q
    |||||||||||||||||||||||||||| |||||||    
T  164246 aaaagggtcttataattagggacggaggtagtattt 164211  T

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Target: scaffold0237 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 6614 - 6648
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtatt 59  Q
    |||||||||||||||||||||||||||| ||||||    
T  6614 aaaagggtcttataattagggacggaggtagtatt 6648  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 12102 - 12064
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  12102 ttctcaaaagggtcttataattagggacggagggagtat 12064  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 47677 - 47639
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtat 58  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  47677 ttctcaaaagggtcttataattagggacggagggagtat 47639  T

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Target: scaffold0674 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 5188 - 5151
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  5188 ttctcaaaagggtcttataattagggacggaggtagta 5151  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 3782 - 3819
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  3782 ttctcaaaagggtcttataattagggacggagggagta 3819  T

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Target: scaffold0549 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 10182 - 10219
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  10182 ttctcaaaagggtcttataattagggacggaggtagta 10219  T

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Target: scaffold0250 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 9426 - 9467
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttg 61  Q
    |||| |||||| ||||||||||||||||||||| ||||||||    
T  9426 ttctcaaaaggatcttataattagggacggaggtagtatttg 9467  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 18534 - 18497
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  18534 ttctcaaaagggtcttataattagggacggaggtagta 18497  T

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Target: scaffold0240; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 18761 - 18793
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  18761 aaaagggtcttataattagggacggaggtagta 18793  T

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Target: scaffold0161 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 3475 - 3438
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  3475 ttctcaaaagggtcttataattagggacggaggtagta 3438  T

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Target: scaffold0107 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 48691 - 48654
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  48691 ttctcaaaagggtcttataattagggacggaggtagta 48654  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 65637 - 65678
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagtatttg 61  Q
    |||| |||| ||||||||||||||||||||||| ||||||||    
T  65637 ttctcaaaaaggtcttataattagggacggagggagtatttg 65678  T

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Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 65410 - 65378
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  65410 aaaagggtcttataattagggacggagggagta 65378  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 117883 - 117846
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  117883 ttctcaaaaggatcttataattagggacggaggaagta 117846  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 45709 - 45672
Alignment:
Q  20 ttcttaaaagggtcttataattagggacggaggaagta 57  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  45709 ttcttaaaagggtcttataattagagacggaggtagta 45672  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 355336 - 355369
Alignment:
Q  25 aaaagggtcttataattagggacggaggaagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  355336 aaaagggtcttataattagggacggagggagtat 355369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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