View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2324_high_29 (Length: 440)
Name: NF2324_high_29
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2324_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 21024723 - 21025142
Alignment:
| Q |
1 |
gcgccaactttgataaccaaaagcattaacatatcttgcttttaaccacaaaaaagaaaagcaacttagttttatccagaaactgatcaattgagttttt |
100 |
Q |
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|||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
21024723 |
gcgccaactttgataaccaaaagcatcaacatattttgctttcaaccacaaaaaagaaa-gcaacttagttttatccagaaactgatcaattgagttttt |
21024821 |
T |
|
| Q |
101 |
cttattgtgaaatattcggttgttcctttcattccaaataacaagtacatgagagtcaaattaaatacattatagaactgaaattatcacattctaaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || || | |
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| T |
21024822 |
cttattgtgaaatattcggttgttcctttcattccaaataacaagtacatgagagtcaaattaaatacattataaaaccgaaattatcacatgctgaaaa |
21024921 |
T |
|
| Q |
201 |
caaatgatatgttgattcatggctaccacatcaacccacgcaaaactgtgaatcatgaggaatgacatttaatctaaataaattatctttgatggacaac |
300 |
Q |
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||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| ||| ||| || |||||||||||||||||||||||||||| |
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| T |
21024922 |
caaatgatatgttgattcatgactaccacatcaactcacgcaaagctgtgaatcatgagggatgtcatctagtctaaataaattatctttgatggacaac |
21025021 |
T |
|
| Q |
301 |
ttattatcgagatgacgctaaacaaataaagacacatttaatgggatacctgaatgccaaatgaaattcgaatnnnnnnnntagttgttatatcaaattt |
400 |
Q |
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||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
21025022 |
ttattgtcgagatgacgctaaacaaataaagacacatttaatcggatgcctgaatgccaaatgaaattcgaat-aaaaaaatagttgttatatcaaattt |
21025120 |
T |
|
| Q |
401 |
gtcaataatgtatgttctattt |
422 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
21025121 |
gtcaataatgtatgttctattt |
21025142 |
T |
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