View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2324_high_55 (Length: 330)
Name: NF2324_high_55
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2324_high_55 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 11 - 313
Target Start/End: Complemental strand, 40514774 - 40514474
Alignment:
| Q |
11 |
atcatcacgaaagacctaagacagctttggtgtttgccttaaatataacaataaccatgtgccgtgagtgtcaatgccaaatattgtgaagtgatatgtc |
110 |
Q |
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| T |
40514774 |
atcatcacgaaagacctaagacagctttggtgtttgccttaaatataacaataaccatgtgccgtgagtgtcaatgccaaatattgtgaagtgatatgtc |
40514675 |
T |
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| Q |
111 |
ggcaataacttacatagagtggattctaaccaaacagcacttaaaatgatcatataacccacaaataatattggaatttgatttaattagcatgcgtatc |
210 |
Q |
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| T |
40514674 |
ggcaataacttacatagagtggattctaaccaaacagcacttaaaatgatcatataacccacaaataatattggaatttgatttaattagcatgcgtatc |
40514575 |
T |
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| Q |
211 |
actgtacgatatccatttttcaaatgatcacatttacttacaccatcatctcaaatattttcagtaagaaatgcatggagagtgaaaatgataacaaagg |
310 |
Q |
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| T |
40514574 |
actgtacgaaatccatttttcaaatgatcacatttactt--accatcatctcaaatattttcagtaagaaatgcatggagagtgaaaatgataacaaagg |
40514477 |
T |
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| Q |
311 |
aag |
313 |
Q |
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||| |
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| T |
40514476 |
aag |
40514474 |
T |
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