View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2324_high_57 (Length: 316)

Name: NF2324_high_57
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2324_high_57
NF2324_high_57
[»] chr1 (48 HSPs)
chr1 (129-313)||(21726693-21726879)
chr1 (190-316)||(7766771-7766900)
chr1 (190-316)||(24674417-24674546)
chr1 (185-316)||(46607829-46607963)
chr1 (190-316)||(4621281-4621410)
chr1 (190-316)||(8077671-8077800)
chr1 (159-316)||(30677170-30677329)
chr1 (190-316)||(24122047-24122176)
chr1 (1-69)||(21726559-21726627)
chr1 (196-316)||(7946874-7946996)
chr1 (196-316)||(15059446-15059569)
chr1 (185-316)||(17935788-17935922)
chr1 (185-316)||(23232305-23232443)
chr1 (190-316)||(9500399-9500528)
chr1 (158-316)||(27454908-27455070)
chr1 (190-316)||(33905554-33905683)
chr1 (204-311)||(23734154-23734265)
chr1 (204-311)||(23741346-23741457)
chr1 (189-316)||(36155932-36156062)
chr1 (185-316)||(1378917-1379050)
chr1 (190-316)||(7197291-7197419)
chr1 (190-316)||(7578433-7578562)
chr1 (190-316)||(45859087-45859216)
chr1 (189-270)||(46113495-46113576)
chr1 (190-316)||(34778366-34778492)
chr1 (202-277)||(168237-168312)
chr1 (214-316)||(8254796-8254901)
chr1 (190-279)||(37351545-37351634)
chr1 (196-256)||(20487297-20487357)
chr1 (202-316)||(32729581-32729697)
chr1 (202-257)||(18646889-18646944)
chr1 (185-279)||(2272363-2272457)
chr1 (189-279)||(29057422-29057511)
chr1 (185-276)||(8779823-8779914)
chr1 (189-257)||(25237095-25237163)
chr1 (196-279)||(32930779-32930862)
chr1 (190-252)||(14258538-14258600)
chr1 (160-258)||(24216973-24217070)
chr1 (190-316)||(25496536-25496661)
chr1 (217-275)||(39964563-39964621)
chr1 (220-257)||(16899557-16899594)
chr1 (189-257)||(19034492-19034560)
chr1 (217-276)||(1486469-1486527)
chr1 (185-297)||(40145950-40146059)
chr1 (196-238)||(1818764-1818806)
chr1 (202-316)||(18533768-18533885)
chr1 (217-257)||(16539659-16539699)
chr1 (246-316)||(45331665-45331739)
[»] chr2 (44 HSPs)
chr2 (196-316)||(17324796-17324918)
chr2 (190-316)||(44946097-44946226)
chr2 (190-316)||(4567481-4567610)
chr2 (158-316)||(11941254-11941414)
chr2 (190-308)||(10582043-10582163)
chr2 (196-316)||(15037989-15038112)
chr2 (197-316)||(35171831-35171953)
chr2 (190-316)||(33827617-33827746)
chr2 (190-316)||(44976197-44976327)
chr2 (196-316)||(19054055-19054179)
chr2 (190-304)||(27290612-27290729)
chr2 (190-316)||(36242356-36242485)
chr2 (189-316)||(41314015-41314144)
chr2 (207-316)||(24196045-24196155)
chr2 (190-316)||(43374374-43374498)
chr2 (185-316)||(25293185-25293312)
chr2 (196-316)||(5394047-5394170)
chr2 (189-316)||(30466874-30467004)
chr2 (202-316)||(36390612-36390729)
chr2 (212-316)||(2140530-2140634)
chr2 (190-316)||(34516458-34516581)
chr2 (196-316)||(8258927-8259050)
chr2 (204-312)||(23787056-23787167)
chr2 (196-279)||(1191543-1191626)
chr2 (196-251)||(4852588-4852643)
chr2 (202-279)||(45271420-45271497)
chr2 (190-257)||(32845115-32845182)
chr2 (189-316)||(41329866-41329995)
chr2 (204-306)||(13266528-13266632)
chr2 (190-316)||(8192396-8192524)
chr2 (190-240)||(18976548-18976598)
chr2 (185-237)||(32526211-32526263)
chr2 (217-316)||(3943791-3943893)
chr2 (185-279)||(40997434-40997528)
chr2 (196-257)||(6714387-6714448)
chr2 (217-257)||(19605951-19605991)
chr2 (204-279)||(5608118-5608193)
chr2 (190-257)||(28194239-28194306)
chr2 (220-258)||(19174817-19174855)
chr2 (216-250)||(33569842-33569876)
chr2 (198-278)||(918782-918864)
chr2 (220-257)||(19525502-19525539)
chr2 (239-316)||(28668946-28669026)
chr2 (217-257)||(12086106-12086146)
[»] chr6 (31 HSPs)
chr6 (190-316)||(9238999-9239128)
chr6 (190-316)||(654190-654319)
chr6 (190-316)||(11448895-11449024)
chr6 (190-316)||(34147370-34147499)
chr6 (190-316)||(34159986-34160115)
chr6 (206-316)||(12390465-12390578)
chr6 (190-316)||(15360142-15360271)
chr6 (190-316)||(3222680-3222807)
chr6 (190-316)||(21982364-21982493)
chr6 (191-316)||(1344960-1345088)
chr6 (196-316)||(17081098-17081221)
chr6 (196-316)||(28672097-28672220)
chr6 (158-316)||(9208245-9208405)
chr6 (204-279)||(11840939-11841014)
chr6 (190-316)||(5360115-5360244)
chr6 (190-316)||(9843962-9844091)
chr6 (190-279)||(12591661-12591750)
chr6 (190-316)||(21148555-21148683)
chr6 (196-272)||(13753270-13753346)
chr6 (158-316)||(11007158-11007318)
chr6 (196-276)||(14212922-14213002)
chr6 (189-316)||(17149500-17149630)
chr6 (190-249)||(22576091-22576150)
chr6 (185-256)||(17706414-17706485)
chr6 (202-316)||(9690682-9690799)
chr6 (190-272)||(28968133-28968215)
chr6 (189-255)||(33718566-33718632)
chr6 (190-257)||(33499498-33499566)
chr6 (196-316)||(31039050-31039172)
chr6 (217-257)||(6385921-6385961)
chr6 (217-257)||(10377766-10377806)
[»] chr5 (44 HSPs)
chr5 (185-316)||(38684227-38684360)
chr5 (190-316)||(8484705-8484834)
chr5 (184-316)||(18207225-18207360)
chr5 (158-316)||(15641149-15641309)
chr5 (189-316)||(11926545-11926676)
chr5 (190-316)||(19456255-19456382)
chr5 (190-316)||(32059484-32059613)
chr5 (196-316)||(27498775-27498898)
chr5 (189-316)||(13038499-13038628)
chr5 (190-315)||(25586956-25587085)
chr5 (190-316)||(33709547-33709674)
chr5 (190-316)||(30485852-30485981)
chr5 (190-316)||(31287990-31288119)
chr5 (190-316)||(36954842-36954971)
chr5 (190-316)||(13108494-13108622)
chr5 (196-316)||(34310172-34310295)
chr5 (196-297)||(37495077-37495180)
chr5 (196-316)||(11464952-11465074)
chr5 (190-316)||(12398492-12398621)
chr5 (196-277)||(1827616-1827697)
chr5 (196-316)||(10869609-10869732)
chr5 (185-316)||(19145456-19145589)
chr5 (185-313)||(42193504-42193633)
chr5 (190-316)||(6014324-6014453)
chr5 (190-316)||(7085670-7085799)
chr5 (190-316)||(15971166-15971295)
chr5 (190-274)||(38631050-38631134)
chr5 (185-316)||(5049156-5049289)
chr5 (190-316)||(4603801-4603930)
chr5 (190-316)||(23270566-23270695)
chr5 (185-279)||(25750693-25750789)
chr5 (190-316)||(15931083-15931211)
chr5 (190-240)||(22392725-22392775)
chr5 (185-279)||(27487639-27487733)
chr5 (190-274)||(7151353-7151437)
chr5 (190-235)||(34049846-34049891)
chr5 (196-251)||(17015525-17015580)
chr5 (246-316)||(9659355-9659428)
chr5 (235-316)||(35425082-35425166)
chr5 (185-243)||(5067320-5067378)
chr5 (219-257)||(21589349-21589387)
chr5 (202-316)||(26009308-26009425)
chr5 (196-261)||(12317252-12317317)
chr5 (196-256)||(37397743-37397803)
[»] chr3 (56 HSPs)
chr3 (190-316)||(26174137-26174266)
chr3 (196-316)||(15566544-15566666)
chr3 (157-316)||(29915314-29915474)
chr3 (157-316)||(29964467-29964627)
chr3 (190-316)||(35492935-35493064)
chr3 (190-316)||(30807196-30807326)
chr3 (190-316)||(25289758-25289887)
chr3 (190-316)||(26108316-26108445)
chr3 (190-316)||(45529798-45529927)
chr3 (185-316)||(52821680-52821813)
chr3 (190-316)||(53424221-53424349)
chr3 (185-316)||(21362962-21363096)
chr3 (185-316)||(48977407-48977541)
chr3 (202-316)||(8456194-8456311)
chr3 (190-316)||(46576372-46576501)
chr3 (190-316)||(49258306-49258435)
chr3 (190-316)||(34492619-34492748)
chr3 (202-316)||(40133493-40133610)
chr3 (190-316)||(45272460-45272589)
chr3 (190-316)||(53233954-53234083)
chr3 (196-316)||(18176931-18177054)
chr3 (196-316)||(7470260-7470382)
chr3 (190-316)||(10190786-10190915)
chr3 (190-316)||(25379785-25379914)
chr3 (190-312)||(30257648-30257773)
chr3 (190-316)||(39041896-39042025)
chr3 (190-279)||(40940849-40940938)
chr3 (206-316)||(8097323-8097436)
chr3 (190-316)||(10083863-10083992)
chr3 (211-316)||(2511341-2511449)
chr3 (185-316)||(7485574-7485703)
chr3 (185-316)||(32151443-32151577)
chr3 (196-316)||(31537882-31538005)
chr3 (196-316)||(1692864-1692986)
chr3 (189-316)||(33398512-33398642)
chr3 (196-279)||(52455733-52455816)
chr3 (202-301)||(53288772-53288873)
chr3 (196-279)||(19857081-19857164)
chr3 (202-316)||(51532825-51532942)
chr3 (196-316)||(4462663-4462785)
chr3 (189-252)||(9853639-9853702)
chr3 (214-261)||(24407309-24407356)
chr3 (196-279)||(38732996-38733079)
chr3 (220-279)||(48972795-48972854)
chr3 (185-316)||(8958079-8958214)
chr3 (202-250)||(55287839-55287887)
chr3 (185-316)||(25344101-25344235)
chr3 (229-312)||(1242036-1242122)
chr3 (196-256)||(49167086-49167146)
chr3 (196-279)||(11390632-11390715)
chr3 (219-316)||(17579179-17579280)
chr3 (216-250)||(10445123-10445157)
chr3 (265-316)||(24165759-24165812)
chr3 (159-252)||(9842915-9843006)
chr3 (196-257)||(25017545-25017606)
chr3 (189-258)||(50583015-50583084)
[»] scaffold0328 (2 HSPs)
scaffold0328 (191-309)||(15016-15137)
scaffold0328 (225-316)||(13091-13182)
[»] scaffold0019 (1 HSPs)
scaffold0019 (190-316)||(161833-161962)
[»] chr8 (44 HSPs)
chr8 (190-316)||(39349284-39349413)
chr8 (190-316)||(4718673-4718802)
chr8 (190-316)||(28193502-28193631)
chr8 (190-316)||(34237699-34237828)
chr8 (189-311)||(15259455-15259580)
chr8 (190-316)||(2618214-2618343)
chr8 (190-316)||(3734667-3734796)
chr8 (202-316)||(21603270-21603387)
chr8 (159-316)||(32879277-32879436)
chr8 (190-316)||(19471637-19471767)
chr8 (190-316)||(19542561-19542691)
chr8 (190-316)||(19590005-19590135)
chr8 (190-279)||(14632982-14633071)
chr8 (196-316)||(8765570-8765693)
chr8 (189-306)||(27746390-27746509)
chr8 (185-316)||(28088309-28088443)
chr8 (185-316)||(42643162-42643296)
chr8 (202-316)||(20305948-20306065)
chr8 (190-316)||(20469945-20470074)
chr8 (202-316)||(21092581-21092698)
chr8 (189-316)||(4698767-4698897)
chr8 (217-316)||(6953051-6953153)
chr8 (202-316)||(264444-264560)
chr8 (202-316)||(651361-651477)
chr8 (202-316)||(837096-837212)
chr8 (189-316)||(2166726-2166853)
chr8 (190-316)||(18532135-18532264)
chr8 (190-316)||(42328033-42328161)
chr8 (196-279)||(21667584-21667667)
chr8 (159-316)||(24018380-24018540)
chr8 (217-316)||(24999289-24999391)
chr8 (220-316)||(25248407-25248504)
chr8 (190-306)||(26168903-26169021)
chr8 (202-310)||(34610737-34610848)
chr8 (190-257)||(7558049-7558116)
chr8 (196-276)||(34694664-34694743)
chr8 (185-316)||(36848794-36848927)
chr8 (196-253)||(3794825-3794882)
chr8 (215-316)||(10292108-10292211)
chr8 (185-316)||(18128536-18128670)
chr8 (202-308)||(28964073-28964182)
chr8 (190-276)||(34639295-34639379)
chr8 (279-316)||(12312965-12313002)
chr8 (217-261)||(6536579-6536623)
[»] chr7 (55 HSPs)
chr7 (190-316)||(2103083-2103212)
chr7 (190-316)||(7175906-7176035)
chr7 (190-316)||(7275305-7275434)
chr7 (190-316)||(22119916-22120045)
chr7 (190-316)||(40542954-40543083)
chr7 (204-316)||(654749-654863)
chr7 (157-316)||(10091184-10091345)
chr7 (190-316)||(21835179-21835308)
chr7 (190-316)||(2751299-2751428)
chr7 (190-316)||(11997877-11998006)
chr7 (190-316)||(21217877-21218006)
chr7 (190-316)||(22703514-22703643)
chr7 (196-316)||(27704036-27704158)
chr7 (190-291)||(7799902-7800005)
chr7 (196-316)||(17196994-17197117)
chr7 (190-316)||(23012552-23012681)
chr7 (202-316)||(29861711-29861827)
chr7 (201-316)||(16374033-16374151)
chr7 (190-312)||(18044135-18044260)
chr7 (202-316)||(28950911-28951028)
chr7 (185-316)||(31273937-31274070)
chr7 (196-279)||(27009393-27009476)
chr7 (196-308)||(28089850-28089968)
chr7 (190-279)||(17212081-17212170)
chr7 (202-316)||(22638332-22638445)
chr7 (190-257)||(22299877-22299944)
chr7 (185-316)||(39145696-39145830)
chr7 (190-276)||(13332510-13332596)
chr7 (190-316)||(19421259-19421388)
chr7 (185-314)||(14199713-14199844)
chr7 (190-316)||(2344327-2344456)
chr7 (185-279)||(42814887-42814981)
chr7 (190-316)||(42913557-42913686)
chr7 (217-316)||(41907557-41907659)
chr7 (190-316)||(27312180-27312309)
chr7 (185-257)||(22696343-22696415)
chr7 (196-312)||(36772351-36772469)
chr7 (190-261)||(25333447-25333518)
chr7 (159-291)||(32849589-32849722)
chr7 (202-279)||(9718071-9718148)
chr7 (159-276)||(43785386-43785502)
chr7 (190-234)||(23854424-23854468)
chr7 (217-257)||(28647024-28647064)
chr7 (233-316)||(23092167-23092253)
chr7 (230-279)||(6491675-6491724)
chr7 (190-279)||(22643426-22643515)
chr7 (196-257)||(40332133-40332194)
chr7 (217-261)||(21558187-21558231)
chr7 (189-244)||(31713014-31713069)
chr7 (246-316)||(3851841-3851914)
chr7 (202-276)||(9683866-9683940)
chr7 (189-239)||(21370624-21370674)
chr7 (185-257)||(8435801-8435873)
chr7 (217-257)||(23330845-23330885)
chr7 (205-257)||(35173138-35173190)
[»] scaffold0623 (1 HSPs)
scaffold0623 (190-316)||(1100-1229)
[»] scaffold0366 (2 HSPs)
scaffold0366 (190-316)||(9343-9472)
scaffold0366 (190-316)||(12045-12173)
[»] chr4 (46 HSPs)
chr4 (190-316)||(32986221-32986350)
chr4 (190-316)||(33696323-33696452)
chr4 (196-316)||(34844802-34844925)
chr4 (196-316)||(52983649-52983772)
chr4 (190-316)||(27528839-27528968)
chr4 (190-316)||(40058896-40059025)
chr4 (190-316)||(19660576-19660705)
chr4 (190-316)||(20078028-20078157)
chr4 (190-316)||(46714416-46714546)
chr4 (190-316)||(5609246-5609375)
chr4 (190-316)||(54127386-54127515)
chr4 (190-279)||(25852238-25852327)
chr4 (189-310)||(33992649-33992773)
chr4 (190-316)||(20566373-20566503)
chr4 (189-308)||(49287881-49288002)
chr4 (196-277)||(2351043-2351124)
chr4 (190-316)||(7392009-7392136)
chr4 (190-279)||(22625154-22625243)
chr4 (204-316)||(45787748-45787863)
chr4 (181-316)||(44343529-44343667)
chr4 (185-316)||(51535632-51535774)
chr4 (190-279)||(13873379-13873468)
chr4 (190-315)||(35674786-35674914)
chr4 (190-273)||(1985860-1985943)
chr4 (196-274)||(43719154-43719232)
chr4 (219-316)||(32990488-32990588)
chr4 (215-316)||(34723848-34723952)
chr4 (190-310)||(12500108-12500231)
chr4 (196-316)||(32942400-32942523)
chr4 (190-316)||(35229192-35229321)
chr4 (204-311)||(27574356-27574466)
chr4 (209-316)||(36131554-36131664)
chr4 (220-316)||(18875561-18875659)
chr4 (202-308)||(34835565-34835675)
chr4 (189-316)||(30879210-30879339)
chr4 (202-277)||(20527119-20527194)
chr4 (217-279)||(9517725-9517787)
chr4 (202-279)||(13584338-13584415)
chr4 (209-313)||(21387532-21387639)
chr4 (235-316)||(55961798-55961881)
chr4 (217-270)||(3392759-3392811)
chr4 (217-257)||(22630292-22630332)
chr4 (217-256)||(38740901-38740940)
chr4 (202-276)||(13550244-13550318)
chr4 (217-250)||(38869827-38869860)
chr4 (196-276)||(41621684-41621763)
[»] scaffold0070 (1 HSPs)
scaffold0070 (196-316)||(40355-40478)
[»] scaffold0576 (1 HSPs)
scaffold0576 (190-316)||(5126-5255)
[»] scaffold0026 (1 HSPs)
scaffold0026 (190-316)||(97410-97539)
[»] scaffold0459 (1 HSPs)
scaffold0459 (190-316)||(10738-10866)
[»] scaffold0217 (1 HSPs)
scaffold0217 (190-316)||(7353-7482)
[»] scaffold0051 (1 HSPs)
scaffold0051 (190-316)||(52915-53044)
[»] scaffold0102 (1 HSPs)
scaffold0102 (205-316)||(39131-39245)
[»] scaffold0068 (1 HSPs)
scaffold0068 (185-316)||(41688-41822)
[»] scaffold0460 (1 HSPs)
scaffold0460 (196-256)||(8286-8346)
[»] scaffold0157 (1 HSPs)
scaffold0157 (190-310)||(20246-20369)
[»] scaffold0016 (1 HSPs)
scaffold0016 (220-316)||(32342-32441)
[»] scaffold0199 (1 HSPs)
scaffold0199 (190-257)||(8513-8580)
[»] scaffold0717 (1 HSPs)
scaffold0717 (196-316)||(2-125)
[»] scaffold0049 (1 HSPs)
scaffold0049 (190-257)||(66786-66853)
[»] scaffold0240 (1 HSPs)
scaffold0240 (185-233)||(12884-12932)


Alignment Details
Target: chr1 (Bit Score: 101; Significance: 5e-50; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 129 - 313
Target Start/End: Original strand, 21726693 - 21726879
Alignment:
Q  129 gctacatgggagatcaacactttatctcgtaacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggtt 228  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | | | ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21726693 gctacatgggagatcaacactttatctcgtaacccatttgaggttgacctagtggtt-gatttgggttcttgaagtttgctcctccagaggtctcaggtt 21726791  T
Q  229 cgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtggg 313  Q
    ||||||||| |||||| ||||||| |||||||| | |||| ||||||||  || ||||||||  || ||||| |||||||||||||||    
T  21726792 cgattccctttggtgccaatttcgatgggttaagtccatatagagcttgttctagctttaaacgggtcccccacaagtgggcggtggg 21726879  T

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Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 7766900 - 7766771
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||  ||| ||||||    
T  7766900 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaa 7766801  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  7766800 acggggcccccgcaagtgggcggtgggatt 7766771  T

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Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 24674417 - 24674546
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  24674417 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 24674516  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  24674517 acggggcccccgcaagtgggcggtgggatt 24674546  T

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Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 46607829 - 46607963
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||| |    
T  46607829 ttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgac 46607928  T
Q  283 tttaaatgg-ccccccgcaagtgggcggtgggatt 316  Q
    |||||| || |||||||||||||||||||||||||    
T  46607929 tttaaaaggcccccccgcaagtgggcggtgggatt 46607963  T

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Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 4621410 - 4621281
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  4621410 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 4621311  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  ||  |||||||||||||||||||||||    
T  4621310 acggggtccccgcaagtgggcggtgggatt 4621281  T

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Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 8077671 - 8077800
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  8077671 ttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 8077770  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  8077771 acagggcccccgcaagtgggcggtgggatt 8077800  T

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Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 30677170 - 30677329
Alignment:
Q  159 aacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggt 258  Q
    ||||||||||||||| | | | ||||| | |||||| ||| | |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||     
T  30677170 aacccatttggggttgacctagtggttgg-tttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttcggtgggc 30677268  T
Q  259 taaattcatacagagcttgc--tggctttaaat-ggccccccgcaagtgggcggtgggatt 316  Q
    ||| | ||||||||||||||  ||||||||||| || ||||||||||||||||||||||||    
T  30677269 taagtccatacagagcttgctttggctttaaatgggacccccgcaagtgggcggtgggatt 30677329  T

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Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 24122047 - 24122176
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  24122047 ttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 24122146  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || | ||||||||||||||||||||||    
T  24122147 acggggctcccgcaagtgggcggtgggatt 24122176  T

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Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21726559 - 21726627
Alignment:
Q  1 tcaacaaaataaaaacatggatatctatttggttcatgagattgttccaactcttttaatgccgttcaa 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21726559 tcaacaaaataaaaacatggatatctatttggttcatgagattgttccaactcttttaatgccgttcaa 21726627  T

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Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 7946874 - 7946996
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggcc 293  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| |  ||||||||||||  || |||||||||||      
T  7946874 tcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctcgctttaaatgggg 7946973  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||| |||| ||||    
T  7946974 ccccgcaagtgggtggtgagatt 7946996  T

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Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 15059569 - 15059446
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||  |||||||||||  ||     
T  15059569 tcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggg 15059470  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
     |||||||||||||||||| ||||    
T  15059469 tccccgcaagtgggcggtgagatt 15059446  T

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Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 17935788 - 17935922
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||| | ||||||||| |||  |||||    
T  17935788 ttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtttgctctggc 17935887  T
Q  283 tttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||||||  || |||||||||||||||| |||||||    
T  17935888 tttaaacggggcccccgcaagtgggcgatgggatt 17935922  T

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Target: chr1; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 23232443 - 23232305
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg------c 278  Q
    |||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||| ||| | |||||||||||||      |    
T  23232443 ttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctc 23232344  T
Q  279 tggctttaaat-ggccccccgcaagtgggcggtgggatt 316  Q
    ||||||||||| || |||||||||||||| |||||||||    
T  23232343 tggctttaaatgggacccccgcaagtgggtggtgggatt 23232305  T

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Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 9500528 - 9500399
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  9500528 ttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 9500429  T
Q  288 atgg-ccccccgcaagtgggcggtgggatt 316  Q
    | ||  ||||| ||||||||||||| ||||    
T  9500428 acggagcccccacaagtgggcggtgagatt 9500399  T

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Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 27455070 - 27454908
Alignment:
Q  158 taacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||||||||||||  || | ||| |||  ||||| ||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |    
T  27455070 taacccatttggggttggtctagtgg-ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaatttcggtgag 27454972  T
Q  258 ttaaattcatacagagcttg--ctggctttaaatgg---ccccccgcaagtgggcggtgggatt 316  Q
     ||| | |||||||||||||  ||||||||||| ||   ||||||||| |||||||||||||||    
T  27454971 ctaagtccatacagagcttgctctggctttaaacgggccccccccgcatgtgggcggtgggatt 27454908  T

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Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 33905683 - 33905554
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| | ||||||||| |||  ||||||||||    
T  33905683 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtatcaatttcggtgggttaagtccatacagagtttgttctggctttaa 33905584  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || || ||| |||||| ||||||||||    
T  33905583 acggggcctccgtaagtggacggtgggatt 33905554  T

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Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 311
Target Start/End: Original strand, 23734154 - 23734265
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaa--tggccccccgc 299  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| | ||||||||| ||||  || |||||||   ||||||||||    
T  23734154 tttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgc 23734253  T
Q  300 aagtgggcggtg 311  Q
    ||||||||||||    
T  23734254 aagtgggcggtg 23734265  T

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Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 311
Target Start/End: Original strand, 23741346 - 23741457
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaa--tggccccccgc 299  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| | ||||||||| ||||  || |||||||   ||||||||||    
T  23741346 tttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgc 23741445  T
Q  300 aagtgggcggtg 311  Q
    ||||||||||||    
T  23741446 aagtgggcggtg 23741457  T

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Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 36156062 - 36155932
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggcttta 286  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  || | ||| ||||||||||  | | ||||    
T  36156062 tttgggatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaatttcggtgggccaagtccatgcagagcttgctttagtttta 36155963  T
Q  287 aa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||  || |||||||| |||||||||||||||    
T  36155962 aacagggcccccgcaggtgggcggtgggatt 36155932  T

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Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 1378917 - 1379050
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||||||||||| | |||||| |||||||| |||||||||  |||||||||||| ||| | |||||||| ||||  |||||    
T  1378917 ttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgctctggc 1379016  T
Q  283 tttaaatggccccccgcaagtgggcggtgggatt 316  Q
    |||||| || ||||||||||||| ||||| ||||    
T  1379017 tttaaacgggcccccgcaagtggacggtgagatt 1379050  T

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Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 7197419 - 7197291
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |  ||||||| ||||  ||||||||||    
T  7197419 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtggg-taagtcaatacagaccttgctctggctttaa 7197321  T
Q  288 atg-gccccccgcaagtgggcggtgggatt 316  Q
    | | | |||| |||||||||||||| ||||    
T  7197320 acgaggcccctgcaagtgggcggtgagatt 7197291  T

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Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 7578433 - 7578562
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| ||| | |||||| ||||||  ||| ||||||    
T  7578433 ttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctgactttaa 7578532  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||| |||||||||| |||||||||    
T  7578533 acggggccctcgcaagtgggtggtgggatt 7578562  T

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Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 45859216 - 45859087
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| | ||||||  |||||  || |||||||    
T  45859216 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttgctttaa 45859117  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||||||||||||| ||| |||||    
T  45859116 acagggcccccgcaagtgggtggtaggatt 45859087  T

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Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 46113576 - 46113495
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcataca 270  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| | ||||||    
T  46113576 tttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtaccaatttcggtgggctaagtccataca 46113495  T

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Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 34778366 - 34778492
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||   | ||||||||| ||||  |||||||||    
T  34778366 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtaccaattttggtgggtt---tccatacagagtttgctttggctttaa 34778462  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||| ||||||||||    
T  34778463 acggggcccccgcaagtggacggtgggatt 34778492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 168237 - 168312
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg 277  Q
    ||||||||| | || |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  168237 agtttgctctttcaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttg 168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 316
Target Start/End: Complemental strand, 8254901 - 8254796
Alignment:
Q  214 cagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggt 310  Q
    ||||||||||||||||||||  ||||||||  |||||||||||| ||| |||||||||| ||||  |||||||||||  || ||||||||||||||||||    
T  8254901 cagaggtctcaggttcgattatctctggtgtcaatttcggtgggctaagttcatacagaacttgctctggctttaaacggggcccccgcaagtgggcggt 8254802  T
Q  311 gggatt 316  Q
    ||||||    
T  8254801 gggatt 8254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 37351634 - 37351545
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| |||||||||||||| | ||||||||||||||||| |||| ||| |||||||||||| ||| | |||||||||||||||    
T  37351634 ttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatgccaatttcggtgggctaagtccatacagagcttgct 37351545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 20487357 - 20487297
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  20487357 tcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 20487297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 32729581 - 32729697
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaat-ggccccccg 298  Q
    ||||||||||||   | ||||||||||||||||||| |||||| ||||||||||||  || | |||||||||||||  |||||||||||| ||  |||||    
T  32729581 agtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtggg-caagtccatacagagcttgctctggctttaaatggggtccccg 32729679  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||||||||||||    
T  32729680 caagtgggcggtgggatt 32729697  T

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Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 18646889 - 18646944
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  18646889 agtttgcttctccagaggtctcaggttcgattctctctggtgccaatttcggtggg 18646944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 2272363 - 2272457
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||| ||||| ||||  ||||||||||| ||||||||||||||| ||||||||||| ||| ||||||| |||| ||| |||||||| || |||||    
T  2272363 ttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaatttcgctgggctaagttcatacaaagtttgct 2272457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 29057511 - 29057422
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattc-atacagagcttgct 279  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||| ||||||| |||  |||| || ||||||||||||||    
T  29057511 tttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctcttgtgccaatttcgatgg--taaagtctatacagagcttgct 29057422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 8779914 - 8779823
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    |||||||||| ||||| |||||||| ||||||||||||||| ||||||| | ||| |||  |||||||||||| ||| | |||||| |||||    
T  8779914 ttgatttgggatcttggagtttgcttctccagaggtctcagcttcgatttcttctagtgtcaatttcggtgggctaagtccatacacagctt 8779823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 25237163 - 25237095
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||| ||||| |||||||| |||   ||||||||||||||||||||||| |||| ||||||||||||    
T  25237163 tttgggatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtggg 25237095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 32930779 - 32930862
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| ||||| ||||||||||| |||||||| ||||||||||  |||| |||||| ||| | ||| |||||||||||    
T  32930779 tcttggagtttactccttcagaggtctcaagttcgatttcctctggtgcccattttggtgggctaagtccatgcagagcttgct 32930862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 14258600 - 14258538
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcg 252  Q
    ||||| ||||| |||||| ||||||||| ||||| |||||||||||||||||| | |||||||    
T  14258600 ttgggatcttggagtttgttcctccagatgtctctggttcgattccctctggtaccaatttcg 14258538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 24216973 - 24217070
Alignment:
Q  160 acccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggt 258  Q
    |||||||||||||| | | | ||||| || ||||| ||||| ||| ||||||||   ||||||||||||||||| ||| |||||| |||||||||||||    
T  24216973 acccatttggggttgacctagtggtt-gacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttcggtgggt 24217070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 25496661 - 25496536
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgctggctttaaat 289  Q
    ||||| ||||| || |||||||||   |||||||| |||||||||||||| ||||  ||||||||| |  || ||||||  |||||| ||||||| ||||    
T  25496661 ttgggatcttggagattgctcctcttaaggtctcaagttcgattccctctagtgcctatttcggtgag-caagttcatattgagcttactggcttaaaat 25496563  T
Q  290 ggccccccgcaagtgggcggtgggatt 316  Q
    ||  | |||||||||| ||||||||||    
T  25496562 ggggctccgcaagtggacggtgggatt 25496536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 39964563 - 39964621
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagct 275  Q
    |||||||||||| ||||||||||||||| |||||||||||| | | |||| ||||||||    
T  39964563 aggtctcaggtttgattccctctggtgccaatttcggtgggctgagttcacacagagct 39964621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 16899557 - 16899594
Alignment:
Q  220 tctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16899557 tctcaggttcgattccctctggtgccaatttcggtggg 16899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 19034560 - 19034492
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||| ||||| |||||| ||||| | |||| ||||||||||||  ||||||||| ||||||||||||    
T  19034560 tttgggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaatttcggtggg 19034492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 1486469 - 1486527
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    ||||||||||||||||||||| |||||| ||||||| |||| ||| | ||||||||||||    
T  1486469 aggtctcaggttcgattccctttggtgccaatttcgatggg-taagtccatacagagctt 1486527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 40146059 - 40145950
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||||||| | ||||||||||||||||| |||     |||||||||||| ||||| |||| |||||  ||||| ||| | |||||||||||||  ||| |    
T  40146059 ttgatttgtgatcttgaagtttgctccttcag-----tcaggttcgatttcctctagtgccaatttatgtgggctaagtccatacagagcttgctctgac 40145965  T
Q  283 tttaaatggcccccc 297  Q
    ||||||||| |||||    
T  40145964 tttaaatgggccccc 40145950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 1818764 - 1818806
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctc 238  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||    
T  1818764 tcttggagtttgctcttccagaggtttcaggttcgattccctc 1818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 18533885 - 18533768
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    ||||||||||||||||||| |||| || ||||| |||| |||| ||||||| |||  ||| | |||| ||||||||  ||| |||||||  || |||| |    
T  18533885 agtttgctcctccagaggtatcagatttgattctctctagtgccaatttcgatggactaagtccatatagagcttgttctgactttaaacggggcccctg 18533786  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||| ||||||||    
T  18533785 caagtgggccgtgggatt 18533768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 16539659 - 16539699
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||||| ||||||||||||||| ||||| ||||||    
T  16539659 aggtctcaggtttgattccctctggtgccaattttggtggg 16539699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 45331739 - 45331665
Alignment:
Q  246 aatttcggtgggttaaattcatacagagcttgc--tggctttaaa--tggccccccgcaagtgggcggtgggatt 316  Q
    |||||||||||| ||| | ||||||||||||||  ||||||||||   ||| |||||||||||| ||||||||||    
T  45331739 aatttcggtgggctaagtccatacagagcttgctttggctttaaacggggctccccgcaagtggacggtgggatt 45331665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 17324796 - 17324918
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggcc 293  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||||||| |    
T  17324796 tcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgggc 17324895  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    |||| ||||||||||||||||||    
T  17324896 ccccacaagtgggcggtgggatt 17324918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 44946226 - 44946097
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| | |||||||| ||||  ||||||||||    
T  44946226 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaa 44946127  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  |||||||||||||||||||||||||||    
T  44946126 acgggccccccgcaagtgggcggtgggatt 44946097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 4567610 - 4567481
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||| ||||| |||||||||||||  ||||||||||    
T  4567610 ttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctctggtgccaatttcggtgggctaaatccatacagagcttgttctggctttaa 4567511  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||| ||||||||||||||||||    
T  4567510 acggggcccccacaagtgggcggtgggatt 4567481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 11941414 - 11941254
Alignment:
Q  158 taacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||||||||||||  || | ||| |||  ||||| ||||| |||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||    
T  11941414 taacccatttggggttggtctagtgg-ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaattttggtggg 11941316  T
Q  258 ttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    |||| | |||||||||||||  |||||||||||  || ||||||||||||||||||||||||    
T  11941315 ttaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggatt 11941254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 190 - 308
Target Start/End: Complemental strand, 10582163 - 10582043
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  || |||||||    
T  10582163 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctagctttaa 10582064  T
Q  288 atggccccccgcaagtgggcg 308  Q
    | || ||| ||||||||||||    
T  10582063 acgggccctcgcaagtgggcg 10582043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 15037989 - 15038112
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaatgg-c 292  Q
    ||||| |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||| | ||||||||||||||  |||||||||| ||      
T  15037989 tcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggag 15038088  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||    
T  15038089 cccccgcaagtgggcggtgggatt 15038112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 35171831 - 35171953
Alignment:
Q  197 cttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggcc 293  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||| | |||||||||||||  |||||||||||  || |    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggc 35171930  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    |||||||||||||||||||||||    
T  35171931 ccccgcaagtgggcggtgggatt 35171953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 33827746 - 33827617
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||| | |||||||||||||  ||||||||||    
T  33827746 ttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctctggctttaa 33827647  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||| |||||||||||||||||||    
T  33827646 acgggacccctgcaagtgggcggtgggatt 33827617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 44976327 - 44976197
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| | ||||||||| |||  ||||||||||    
T  44976327 ttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagtttgctctggctttaa 44976228  T
Q  288 a--tggccccccgcaagtgggcggtgggatt 316  Q
    |   ||| |||||||||||||||||||||||    
T  44976227 acggggctccccgcaagtgggcggtgggatt 44976197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 19054055 - 19054179
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaatgg-- 291  Q
    ||||| ||| |||||||||| |||||||||||| |||||| ||||||| ||| ||||||||| ||| | ||||||||||||||  |||||||||||||      
T  19054055 tcttggagtctgctcctccaaaggtctcaggtttgattccttctggtgttaacttcggtgggctaagtccatacagagcttgctttggctttaaatggaa 19054154  T
Q  292 ccccccgcaagtgggcggtgggatt 316  Q
    |||||||||||||||||||||||||    
T  19054155 ccccccgcaagtgggcggtgggatt 19054179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 27290612 - 27290729
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  27290612 ttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 27290711  T
Q  288 a-tggccccccgcaagtg 304  Q
    |  |||||||||||||||    
T  27290712 acgggccccccgcaagtg 27290729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 36242485 - 36242356
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| | ||  |||||||||  ||||||||||    
T  36242485 ttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctggctttaa 36242386  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  ||  |||||||||||||||||||||||    
T  36242385 acggggtccccgcaagtgggcggtgggatt 36242356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 316
Target Start/End: Original strand, 41314015 - 41314144
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |  ||||||||||||  ||| |||||    
T  41314015 tttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagcttgctctgacttta 41314114  T
Q  287 aatggccccccgcaagtgggcggtgggatt 316  Q
    || ||   ||||||||||| ||||||||||    
T  41314115 aacgggatcccgcaagtggacggtgggatt 41314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 24196045 - 24196155
Alignment:
Q  207 gctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgcaagtg 304  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| | |||||||| ||||  ||||||||||| ||  |||||||||||    
T  24196045 gctcctccagaggtttcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctctggctttaaacgg-gccccgcaagtg 24196143  T
Q  305 ggcggtgggatt 316  Q
    ||||||||||||    
T  24196144 ggcggtgggatt 24196155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 43374498 - 43374374
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| || ||||| ||||||  ||||||||||    
T  43374498 ttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagcttgctctggctttaa 43374399  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
         |||||||||||| |||||||||||    
T  43374398 ----gcccccgcaagtgagcggtgggatt 43374374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 25293185 - 25293312
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgctggctt 284  Q
    |||| ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| |||||    ||||  |||||||    
T  25293185 ttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcat----agct--ctggctt 25293278  T
Q  285 taaa--tggccccccgcaagtgggcggtgggatt 316  Q
    ||||   ||||||||||||||||||| |||||||    
T  25293279 taaacggggccccccgcaagtgggcgatgggatt 25293312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 5394047 - 5394170
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaat-ggc 292  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||  ||||||| |||| ||| | ||||||||| |||  ||| |||||||| ||     
T  5394047 tcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagagtttgctctgactttaaatgggg 5394146  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    || |||||||||||||||||||||    
T  5394147 ccgccgcaagtgggcggtgggatt 5394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 30467004 - 30466874
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| | ||| |||||| ||||| |||||||||||||||||||| ||||| ||| |||||||||||| ||| | |||||||||||||  |||||||||    
T  30467004 tttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggctaagtccatacagagcttgctctggcttta 30466905  T
Q  287 aa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||  || ||||||||||||||| ||||||||    
T  30466904 aaccgggcccccgcaagtgggcagtgggatt 30466874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 36390729 - 36390612
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaat-ggccccccg 298  Q
    |||||||| ||||| ||||||||||||||||| |||||||||| |||||||||||  ||| | |||||| ||||||  ||| |||||||| || ||||||    
T  36390729 agtttgcttctccaaaggtctcaggttcgatttcctctggtgccaatttcggtggactaagtccatacaaagcttgctctgactttaaatgggacccccg 36390630  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||||||||||||    
T  36390629 caagtgggcggtgggatt 36390612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 316
Target Start/End: Complemental strand, 2140634 - 2140530
Alignment:
Q  212 tccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatgg--ccccccgcaagtgggc 307  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    | | |||||||||||||  ||||||||||||||  ||||||||||||||||    
T  2140634 tccagaggtctcaggttcgattccctctggtgtcaatttcggtgg----agtccatacagagcttgctctggctttaaatgggcccccccgcaagtgggc 2140539  T
Q  308 ggtgggatt 316  Q
    |||||||||    
T  2140538 ggtgggatt 2140530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 34516581 - 34516458
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||     |||| ||||||||||||| ||| | |||||||||||||  || |||||||    
T  34516581 ttgggatcttggagtttgctcctccagaggtttcaggttcgattc-----ggtggtaatttcggtgggctaagtccatacagagcttgctctcgctttaa 34516487  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
    | || |||| |||||||||||||||||||    
T  34516486 acgggcccctgcaagtgggcggtgggatt 34516458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 8258927 - 8259050
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa-atggc 292  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||  || ||||| |||||||||| | |||||||| ||||  ||||||||||   ||     
T  8258927 tcttggagtttgctcctccagatgtctcaggttcgattccctctgacgccaattttggtgggttaagtccatacagatcttgttctggctttaatcgggg 8259026  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||| ||||||||||||    
T  8259027 cccccgcaagtaggcggtgggatt 8259050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 312
Target Start/End: Complemental strand, 23787167 - 23787056
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaat-ggccccccgca 300  Q
    |||||| || || |||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||| |||  ||| |||||||| || || |||||    
T  23787167 tttgcttctacaaaggtctcaggtttgattccctctggtgccaatttcggtgggctaaatccatacagagtttgctctgactttaaatgggacctccgca 23787068  T
Q  301 agtgggcggtgg 312  Q
    ||||||||||||    
T  23787067 agtgggcggtgg 23787056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 1191543 - 1191626
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| || | |||||||||||| ||| | ||||||||| |||||    
T  1191543 tcttggagtttgctcctccagaggtctcaggttcgtttccctctagtaccaatttcggtgggctaagtccatacagagtttgct 1191626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 4852588 - 4852643
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttc 251  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4852588 tcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgctaatttc 4852643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 45271420 - 45271497
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||||||| |||||||||| ||| ||||||||||||||||||| |||||| ||||| ||| | |||||||||||||||    
T  45271420 agtttgcttctccagaggtttcatgttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgct 45271497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 32845115 - 32845182
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| ||||| |||||||||||||| | || ||||||||||||||||||||||| ||||||||||||    
T  32845115 ttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttcggtggg 32845182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 316
Target Start/End: Original strand, 41329866 - 41329995
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||  |||||||||||||| |||| |||| |||||||||||||||||| ||||| || ||| ||| | |||| ||||||||  |||||||||    
T  41329866 tttgggatcttagagtttgctcctccaaaggtttcagattcgattccctctggtgccaattttggcgggctaagtccata-agagcttgctctggcttta 41329964  T
Q  287 aat-ggccccccgcaagtgggcggtgggatt 316  Q
    ||| || ||||| ||||||||||||| ||||    
T  41329965 aatggggcccccacaagtgggcggtgagatt 41329995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 13266528 - 13266632
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgcaa 301  Q
    |||||||||  |||||||||| ||||||||| ||||||||| |||| ||||||  ||| | |||||||||||||  ||||||||||| ||  ||||||||    
T  13266528 tttgctcctttagaggtctcatgttcgattcactctggtgccaattccggtggactaagtccatacagagcttgctctggctttaaacggggccccgcaa 13266627  T
Q  302 gtggg 306  Q
    |||||    
T  13266628 gtggg 13266632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 8192524 - 8192396
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt---gctggcttta 286  Q
    ||||| ||||| ||| ||||||||   |||||||||||||||||||||||||||| ||| ||||||||  || | |||| |||||||    |||||||      
T  8192524 ttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtggg-caagtccatatagagctttgctctggcttag 8192426  T
Q  287 aatggccccccgcaagtgggcggtgggatt 316  Q
    || |||||| ||||||||||||||||||||    
T  8192425 aacggcccctcgcaagtgggcggtgggatt 8192396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 18976598 - 18976548
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctg 240  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  18976598 ttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctg 18976548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 32526263 - 32526211
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccct 237  Q
    |||||||||| ||||||||||||||||||   |||||||||||||||||||||    
T  32526263 ttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccct 32526211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 3943791 - 3943893
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtggg 313  Q
    ||||||||| |||||||  ||||||||| ||||||||| || ||| | |||||||||||||  |||||||||||  || | |||||||||||| ||||||    
T  3943791 aggtctcagattcgattttctctggtgccaatttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtggg 3943890  T
Q  314 att 316  Q
    |||    
T  3943891 att 3943893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 40997528 - 40997434
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||| ||||| ||||| |||||||||||||| |||||||| |||| |||||| || || | |||||||||| | ||| |  ||||||||||||||    
T  40997528 ttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattccccctagtaccaatttcggtgagataagtcaatacagagcttgct 40997434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 6714448 - 6714387
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||| |   |||||||||||||    
T  6714448 tcttggagtttgctcctccagaggtctcaggtttgattccatctagcattaatttcggtggg 6714387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 19605991 - 19605951
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  19605991 aggtctcaggttcgattccctctaatgctaatttcggtggg 19605951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 5608193 - 5608118
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||||||| |||||||||||  |||||||| ||||||||  ||||| |||||| ||| | |||| ||||||||||    
T  5608193 tttgctccttcagaggtctcatattcgattctctctggtgtcaattttggtgggctaagtccatatagagcttgct 5608118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 28194306 - 28194239
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| ||||| ||| ||||||||   |||||| ||||||||||| ||||||||| ||||||||||||    
T  28194306 ttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtggg 28194239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 19174817 - 19174855
Alignment:
Q  220 tctcaggttcgattccctctggtgctaatttcggtgggt 258  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  19174817 tctcaggttcgattccttctggtgccaatttcggtgggt 19174855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 33569876 - 33569842
Alignment:
Q  216 gaggtctcaggttcgattccctctggtgctaattt 250  Q
    ||||||||||||||||||| |||||||||||||||    
T  33569876 gaggtctcaggttcgattctctctggtgctaattt 33569842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 918864 - 918782
Alignment:
Q  198 ttgaagtttgctcctccagaggtctcaggttcg---attccctctggtgctaatttcggtgggttaaattcatacagagcttgc 278  Q
    ||||||||||||||||  ||||||||| |||||   ||||||||| |||| ||||||| |||| ||| | ||||||||||||||    
T  918864 ttgaagtttgctcctct-gaggtctcaagttcgtcgattccctcttgtgccaatttcgttgggctaagtccatacagagcttgc 918782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 19525539 - 19525502
Alignment:
Q  220 tctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  19525539 tctcaggttcgattccctctggtgccaattttggtggg 19525502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 28668946 - 28669026
Alignment:
Q  239 tggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    |||||| |||||||||||  ||| | ||||||||||||||  ||||||||||  || ||||| ||||||||||||||||||    
T  28668946 tggtgccaatttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggatt 28669026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 12086146 - 12086106
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||| |||||||||||||| ||||||||||| ||||||    
T  12086146 aggtctcgggttcgattccctccggtgctaatttaggtggg 12086106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 9238999 - 9239128
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||  |||||||||    
T  9238999 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctttggctttaa 9239098  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||||||||||||||    
T  9239099 atggggcccccgcaagtgggcggtgggatt 9239128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 654319 - 654190
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  654319 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 654220  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || | ||||||||||||||||||||||    
T  654219 acggggctcccgcaagtgggcggtgggatt 654190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 11448895 - 11449024
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  11448895 ttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 11448994  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  11448995 acggggcccccgcaagtgggcggtgggatt 11449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 34147370 - 34147499
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  34147370 ttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 34147469  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  |||||||||||||||||||||||||||    
T  34147470 acgggccccccgcaagtgggcggtgggatt 34147499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 34159986 - 34160115
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||| |||||| |||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  34159986 ttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 34160085  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  |||||||||||||||||||||||||||    
T  34160086 acgggccccccgcaagtgggcggtgggatt 34160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 12390465 - 12390578
Alignment:
Q  206 tgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaag 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||||  || ||||||||||    
T  12390465 tgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaag 12390564  T
Q  303 tgggcggtgggatt 316  Q
    ||||||||||||||    
T  12390565 tgggcggtgggatt 12390578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 15360271 - 15360142
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  15360271 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 15360172  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||| ||||||||||||||    
T  15360171 acggggcccccgcaaatgggcggtgggatt 15360142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 3222807 - 3222680
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||| ||||||    
T  3222807 ttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtctttaa 3222709  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
    | ||  |||||||||||||||||||||||    
T  3222708 acggggccccgcaagtgggcggtgggatt 3222680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 21982493 - 21982364
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||  |||||| |||||| ||||| ||| | |||||||||||||  ||||||||||    
T  21982493 ttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 21982394  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  21982393 acggggcccccgcaagtgggcggtgggatt 21982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 191 - 316
Target Start/End: Original strand, 1344960 - 1345088
Alignment:
Q  191 tgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa 288  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| ||| | |||||| ||||||  |||||||||||    
T  1344960 tgggatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaa 1345059  T
Q  289 -tggccccccgcaagtgggcggtgggatt 316  Q
      |||||||||||||||| ||||||||||    
T  1345060 cgggccccccgcaagtggacggtgggatt 1345088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 17081221 - 17081098
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaat-ggc 292  Q
    ||||| |||||||||||||||| |||||| ||| ||||||||||||||  |||||||||||| ||| | |||||||||||||  ||| |||||||| ||     
T  17081221 tcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaatgggg 17081122  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||    
T  17081121 cccccgcaagtgggcggtgggatt 17081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 28672097 - 28672220
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||||  ||||| |||||| ||| | |||||||||||||   ||||||||||  |||    
T  28672097 tcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgggc 28672196  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||| ||||||||||||||||||||    
T  28672197 ccctcgcaagtgggcggtgggatt 28672220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 316
Target Start/End: Original strand, 9208245 - 9208405
Alignment:
Q  158 taacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||||||||||||  || | ||||| |||| ||| ||||| ||||||||||||   |||||||||||||||||||| ||||||| ||||||||||||    
T  9208245 taacccatttggggttgttctagtggttggatt-gggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtggg 9208343  T
Q  258 ttaaattcatacagag-cttgc--tggctttaaat-ggccccccgcaagtgggcggtgggatt 316  Q
      || | ||||||||| |||||  ||||||||||| || ||||||||||||||||||||||||    
T  9208344 -caagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggatt 9208405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 11840939 - 11841014
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | |||||| ||||||||    
T  11840939 tttgctcctccagaggtctcaggctcgattccctctggtgccaatttcggtgggttaagtccatacaaagcttgct 11841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 5360244 - 5360115
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||| ||| |||||||||||||||||||||||||  ||| |||||||||||| ||| | |||||||||||||  ||| ||||||    
T  5360244 ttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacagagcttgctctgactttaa 5360145  T
Q  288 atgg-ccccccgcaagtgggcggtgggatt 316  Q
    | ||  ||||| ||||||||||||||||||    
T  5360144 acggaacccccacaagtgggcggtgggatt 5360115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 9843962 - 9844091
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||| ||||||||||||||||| | |||||||||  ||||| |||||||||| | |||||||||||||  ||||||||||    
T  9843962 ttgggatcttggagtttgctcctctagaggtctcaggttcgacttcctctggtgtcaattttggtgggttaagtccatacagagcttgttctggctttaa 9844061  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||| ||||||||||||| ||||    
T  9844062 acggggccccctcaagtgggcggtgagatt 9844091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 12591661 - 12591750
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||| ||| | |||||||||||||||    
T  12591661 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggctaagtccatacagagcttgct 12591750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 21148683 - 21148555
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||  | ||||||||||| |||||||||||||| |||| ||||||| |||| ||| | |||||||||||||  ||| ||||||    
T  21148683 ttgggatcttggagtttgctttttcagaggtctcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagagcttgctctgactttaa 21148584  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
    | ||  |||||||||||||||||||||||    
T  21148583 acggggccccgcaagtgggcggtgggatt 21148555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 272
Target Start/End: Original strand, 13753270 - 13753346
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacaga 272  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||| ||||||||    
T  13753270 tcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaaatccatacaga 13753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 316
Target Start/End: Original strand, 11007158 - 11007318
Alignment:
Q  158 taacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||||||||| ||| | ||||| | || ||| ||||| |||||||||||||| |||||||||||||||||| ||||| |   ||||||||||||    
T  11007158 taacccatttggggttgatctagtggttggctt-gggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctctcaatttcggtggg 11007256  T
Q  258 ttaaattcatacagagcttg--ctggctttaa-atggccccccgcaagtgggcggtgggatt 316  Q
     ||| | |||||| ||||||  || |||||||   || ||||||||||||||||||||||||    
T  11007257 ctaagtccatacaaagcttgctctagctttaagcggggcccccgcaagtgggcggtgggatt 11007318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 14212922 - 14213002
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||| | |||| |||||||    
T  14212922 tcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtccatatagagctt 14213002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 17149630 - 17149500
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagag-cttgc--tggcttt 285  Q
    |||||| ||||| ||| ||||||||   |||||||||||||||||||||||||||||||||||||| ||  || | ||||||||| |||||  |||||||    
T  17149630 tttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttgg-caagtccatacagagccttgctttggcttt 17149532  T
Q  286 aaat-ggccccccgcaagtgggcggtgggatt 316  Q
    |||| || ||||||||||||  ||||||||||    
T  17149531 aaatggggcccccgcaagtgaacggtgggatt 17149500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 22576091 - 22576150
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatt 249  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  22576091 ttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatt 22576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 17706485 - 17706414
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    |||| ||||| ||||| |||||||||||||||| |||||| |||||||||| |||||||  |||||||||||    
T  17706485 ttgacttgggatcttggagtttgctcctccagaagtctcaagttcgattccttctggtgtcaatttcggtgg 17706414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 9690799 - 9690682
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    ||||||||| ||||||||||| |||||||||| | ||| |||  |||||||||||| ||| | |||||||||||||  |||||||||||  || ||| |     
T  9690799 agtttgctcttccagaggtcttaggttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccctca 9690700  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||| ||||||||||    
T  9690699 caagtggacggtgggatt 9690682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 28968215 - 28968133
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacaga 272  Q
    ||||| ||||| |||||||||||| ||||||||||| |||||||| |||| | |  |||||||||||||||| | ||||||||    
T  28968215 ttgggatcttggagtttgctcctctagaggtctcagattcgattctctctagcgtcaatttcggtgggttaagtccatacaga 28968133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 33718632 - 33718566
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtg 255  Q
    |||||| ||||| ||||| || |||||||| ||||||||||||||| ||||||||| ||||| ||||    
T  33718632 tttgggatcttggagtttacttctccagagatctcaggttcgattctctctggtgcaaattttggtg 33718566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 33499498 - 33499566
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttc-gattccctctggtgctaatttcggtggg 257  Q
    ||||| ||||| ||||||||||||   ||||||||||||| ||||||||||||||  ||||||||||||    
T  33499498 ttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaatttcggtggg 33499566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 31039050 - 31039172
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct--ggctttaaatggcc 293  Q
    ||||| |||||||||| ||| || ||||| ||| |||||||||| ||   ||||||| |||| ||| | ||||||||| |||||  |||| | ||||| |    
T  31039050 tcttggagtttgctccaccaaagatctcaagtttgattccctctagtatcaatttcgatgggctaagtccatacagagtttgctatggctatgaatggac 31039149  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    |||| ||||||||||||| ||||    
T  31039150 ccccacaagtgggcggtgtgatt 31039172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 6385921 - 6385961
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||||||||||| ||| ||||||||||| ||||||    
T  6385921 aggtctcaggttcgattctctccggtgctaatttgggtggg 6385961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 10377766 - 10377806
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||||||||| ||||||| |||||| ||||||||||||    
T  10377766 aggtctcaggttcaattccctatggtgccaatttcggtggg 10377806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 38684227 - 38684360
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||    
T  38684227 ttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggc 38684326  T
Q  283 tttaaatggccccccgcaagtgggcggtgggatt 316  Q
    |||||| || |||||||||||| |||||||||||    
T  38684327 tttaaacgggcccccgcaagtgagcggtgggatt 38684360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 8484834 - 8484705
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| |||||||||||||||  ||||||||||    
T  8484834 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctggctttaa 8484735  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  8484734 acggggcccccgcaagtgggcggtgggatt 8484705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 18207225 - 18207360
Alignment:
Q  184 tttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctgg 281  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| | |||||||||||||  ||||    
T  18207225 tttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctgg 18207324  T
Q  282 ctttaaatg-gccccccgcaagtgggcggtgggatt 316  Q
    ||||||| | | ||||||||||||||||||||||||    
T  18207325 ctttaaacgaggcccccgcaagtgggcggtgggatt 18207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 15641309 - 15641149
Alignment:
Q  158 taacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||||||||||  | | ||| |||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  15641309 taacccatttggggttagcctagtgg-ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtggg 15641211  T
Q  258 ttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
     ||| | |||||||||||||  |||||||||||  || ||||||||||||||||||||||||    
T  15641210 ctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 15641149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 11926676 - 11926545
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||    
T  11926676 tttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttta 11926577  T
Q  287 aa--tggccccccgcaagtgggcggtgggatt 316  Q
    ||   ||||||||||||||||| |||||||||    
T  11926576 aacggggccccccgcaagtgggtggtgggatt 11926545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 19456382 - 19456255
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  19456382 ttgggatcttggagtttgctcctccagaggtctcaggttcga-tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 19456284  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
    | ||  |||||||||||||||||||||||    
T  19456283 acggggccccgcaagtgggcggtgggatt 19456255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 32059613 - 32059484
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  32059613 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 32059514  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  32059513 acggggcccccgcaagtgggcggtgggatt 32059484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 27498898 - 27498775
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| | |||||| ||||||  |||||||||||  ||     
T  27498898 tcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacgggg 27498799  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||    
T  27498798 cccccgcaagtgggcggtgggatt 27498775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 13038628 - 13038499
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg-ctggctttaa 287  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||| ||||||||||||  |  |||||||||    
T  13038628 tttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtatggctttaa 13038529  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  13038528 acggggcccccgcaagtgggcggtgggatt 13038499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 190 - 315
Target Start/End: Original strand, 25586956 - 25587085
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  25586956 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 25587055  T
Q  288 --atggccccccgcaagtgggcggtgggat 315  Q
      | | |||||| |||||||||||| ||||    
T  25587056 acaggaccccccccaagtgggcggtcggat 25587085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 33709674 - 33709547
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgctggctttaaa- 288  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| | |||||||||    |||||||||||     
T  33709674 ttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagagagctctggctttaaac 33709575  T
Q  289 tggccccccgcaagtgggcggtgggatt 316  Q
     || ||||| ||||||||||||||||||    
T  33709574 gggacccccacaagtgggcggtgggatt 33709547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 30485852 - 30485981
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||| ||| | |||||||||||||  ||||||||||    
T  30485852 ttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaa 30485951  T
Q  288 atg-gccccccgcaagtgggcggtgggatt 316  Q
    | |   ||||||||||||||||||||||||    
T  30485952 acgatgcccccgcaagtgggcggtgggatt 30485981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 31288119 - 31287990
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaa 287  Q
    ||||| ||||| |||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||| | |||||| |||||||  || ||||||    
T  31288119 ttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttgactttaa 31288020  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  31288019 acggggcccccgcaagtgggcggtgggatt 31287990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 36954842 - 36954971
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaa 287  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||| | | ||| | ||||||||| ||||  |||||||||    
T  36954842 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggttctaatttcggcgtgctaagtccatacagagtttgctttggctttaa 36954941  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || |||||||||||||||| | ||||||||    
T  36954942 atgggccccccgcaagtggactgtgggatt 36954971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 13108622 - 13108494
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg-ctggctttaaa 288  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| | |||| ||| ||||||||||||  | ||| |||||||    
T  13108622 ttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtctgcctttaaa 13108523  T
Q  289 -tggccccccgcaagtgggcggtgggatt 316  Q
      || ||||||||||||||||||||||||    
T  13108522 cggggcccccgcaagtgggcggtgggatt 13108494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 34310172 - 34310295
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| | |||||||||||||  |||||||||||  ||     
T  34310172 tcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacggga 34310271  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    |||||  |||||| ||||||||||    
T  34310272 cccccataagtggacggtgggatt 34310295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 37495077 - 37495180
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggcc 293  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| | |||||||||||||  ||||||||||| | ||    
T  37495077 tcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgccc 37495176  T
Q  294 cccc 297  Q
    ||||    
T  37495177 cccc 37495180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 11465074 - 11464952
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt--gctggctttaaatggcc 293  Q
    ||||| |||||||||||||| | ||||||||||||||| |||||||||| ||||| |||||| ||| ||||||||||||||   ||||||||||| ||      
T  11465074 tcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacgggg 11464975  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||| |||||||||    
T  11464974 ccccgcaagtgggtggtgggatt 11464952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 12398621 - 12398492
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||  |||||||||||  ||| |||||||||||||||  ||||||||||    
T  12398621 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagcttgctctggctttaa 12398522  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||| ||| ||||| ||||    
T  12398521 atggggcccccgcaaatggacggtgagatt 12398492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 1827697 - 1827616
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg 277  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||| | |||||||||||||    
T  1827697 tcttggagtttgctcctccagaggtctcaggttcgattccctctgataccaatttcggtgggttaagtccatacagagcttg 1827616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 10869732 - 10869609
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaat-ggc 292  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||| | |||||||||||| ||| | || || |||||||  |||||||||||| ||     
T  10869732 tcttggagtttgctcctccaaaggtctcaggttcgattccatctggttccaatttcggtgggctaagtccacactgagcttgctctggctttaaatgggg 10869633  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    || |||||||||||||||||||||    
T  10869632 cctccgcaagtgggcggtgggatt 10869609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 19145589 - 19145456
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt---gctgg 281  Q
    |||| ||||| ||||| ||| ||||||||   ||||||| |||||||||||||||||||| ||||||||||||  || | ||||||||||||    ||||    
T  19145589 ttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtggg-caagtccatacagagctttgctctgg 19145491  T
Q  282 ctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    |||||||||| ||||||||||||||||||||||||    
T  19145490 ctttaaatggtcccccgcaagtgggcggtgggatt 19145456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 313
Target Start/End: Original strand, 42193504 - 42193633
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggc 282  Q
    |||| ||||| ||||| |||||||| | ||||||||||||||||||||| |||||| ||| |||||||||||| ||| |  |||||||| ||||  ||||    
T  42193504 ttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacagagtttgctttggc 42193603  T
Q  283 tttaaatggccccccgcaagtgggcggtggg 313  Q
    |||||||||  ||||||||||||||||||||    
T  42193604 tttaaatgg-accccgcaagtgggcggtggg 42193633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 6014453 - 6014324
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||| |||||||| |||||||||||||| | |||||||| |||||||||||||||| | |||||||||||||  ||||||||||    
T  6014453 ttgggatcttggagtttgcttctccagagatctcaggttcgattacttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaa 6014354  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  ||  || ||||||||||||||| ||||    
T  6014353 acggggtccacgcaagtgggcggtgagatt 6014324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 7085799 - 7085670
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||| |||||||||||||||| ||||||||||||||| |||  |||||||||||| ||| | |||||||||||||  ||| ||||||    
T  7085799 ttgggatcttggagttttctcctccagaggtctccggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaa 7085700  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  ||  |||||||||||||||||||||||    
T  7085699 acggggtccccgcaagtgggcggtgggatt 7085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 15971295 - 15971166
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||||| ||  |||||||||||| ||| | |||||| ||||||  ||| ||||||    
T  15971295 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctgatgtcaatttcggtgggctaagtccatacatagcttgctctgactttaa 15971196  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||| ||||    
T  15971195 acgggacccccgcaagtgggcggtgagatt 15971166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 38631134 - 38631050
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagc 274  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||| | ||||||||||    
T  38631134 ttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcgatgggctaagtccatacagagc 38631050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 5049156 - 5049289
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||||||||  ||||||||||||||  || | ||||||||| ||| |||||||||||| | ||||||| |||  ||| |||||||||||||||  |||||    
T  5049156 ttgatttggaatcttgaagtttgcttttctaaaggtctcagattcaattccctctggtaccaatttcgatggtctaagttcatacagagcttgctctggc 5049255  T
Q  283 tttaaatggccccccgcaagtgggcggtgggatt 316  Q
    |||||| || ||||||||| ||| ||||||||||    
T  5049256 tttaaacgggcccccgcaaatggacggtgggatt 5049289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 4603801 - 4603930
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| || ||||| |||||||||| |||||||| ||||||| |||| ||| | ||||||||||| |  ||||||||||    
T  4603801 ttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagtccatacagagctcgctctggctttaa 4603900  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||| |||||||| ||||||||||    
T  4603901 acggggcccctgcaagtggacggtgggatt 4603930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 23270695 - 23270566
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaa 287  Q
    ||||| ||||| ||||||||| |||| |||||||| |||||||| |||| | ||| |||||||||||| ||| | ||||||||||||||  |||||||||    
T  23270695 ttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtgggctaagtccatacagagcttgctttggctttaa 23270596  T
Q  288 atgg-ccccccgcaagtgggcggtgggatt 316  Q
    | ||  ||||||||| ||| ||||||||||    
T  23270595 acggagcccccgcaaatggacggtgggatt 23270566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 25750789 - 25750693
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgat--tccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||| ||||| ||||| ||||||||||||||||||||||| ||| |||  ||| |||||||| |||||||||||||||| | |||| ||||||||||    
T  25750789 ttgacttgggatcttggagtttgctcctccagaggtctcaagttggatattccttctggtgccaatttcggtgggttaagtccatatagagcttgct 25750693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 15931083 - 15931211
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct--ggctttaa 287  Q
    ||||| ||||| |||||||| || || | |||||||||||||||||||||||||| ||||||||||| | || | |||||||||| ||||  ||||||||    
T  15931083 ttgggatcttggagtttgcttcttcacaagtctcaggttcgattccctctggtgccaatttcggtggct-aagtccatacagagcctgctctggctttaa 15931181  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    |  || | | ||||||||||||||||||||    
T  15931182 acagggctctcgcaagtgggcggtgggatt 15931211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 22392725 - 22392775
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctg 240  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  22392725 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 22392775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 27487733 - 27487639
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||||||||| | ||| ||||||||| ||||||||||||||||| ||| || | |||||| |||||||||||  ||| | |||||||||||||||    
T  27487733 ttgatttgggattttggagtttgctcttccagaggtctcaggtttgatcccatttggtgccaatttcggtggactaagtccatacagagcttgct 27487639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 7151353 - 7151437
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagc 274  Q
    ||||| ||||| |||||||||||| |||||||| |||||||| ||||||||| |  |||||||||||| ||| | ||||||||||    
T  7151353 ttgggatcttggagtttgctcctcaagaggtcttaggttcgactccctctggcgtcaatttcggtgggctaagtccatacagagc 7151437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 34049846 - 34049891
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattcc 235  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  34049846 ttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 17015580 - 17015525
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttc 251  Q
    ||||||||||| ||| | ||||||||||||||| ||||||||||||||| ||||||    
T  17015580 tcttgaagtttcctctttcagaggtctcaggtttgattccctctggtgccaatttc 17015525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 9659428 - 9659355
Alignment:
Q  246 aatttcggtgggttaaattcatacagagcttgct--ggctttaaatgg-ccccccgcaagtgggcggtgggatt 316  Q
    |||||||||||| ||| | |||||| ||||||||  |||||||||||| |||||||||||||| ||||||||||    
T  9659428 aatttcggtgggctaagtccatacacagcttgctctggctttaaatgggccccccgcaagtggacggtgggatt 9659355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 35425082 - 35425166
Alignment:
Q  235 cctctggtgctaatttcggtgggttaaattcatacagagcttgct--ggctttaaatggc-cccccgcaagtgggcggtgggatt 316  Q
    ||||| |||| |||||||||||| ||| | ||||||||||| |||  ||||||||| ||  ||||||||||||||||||||||||    
T  35425082 cctctagtgccaatttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggatt 35425166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 5067320 - 5067378
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtg 243  Q
    |||| ||||| ||||  ||||||||||||||||| ||||||||||||||  ||||||||    
T  5067320 ttgacttgggatcttcgagtttgctcctccagagatctcaggttcgattttctctggtg 5067378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 21589349 - 21589387
Alignment:
Q  219 gtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  21589349 gtctcaggttcgattccctctggtgccaatttaggtggg 21589387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 26009425 - 26009308
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt--gctggctttaaa-tggccccccg 298  Q
    ||||| |||||| | |||| || ||||||||||||| |||||| |||||| ||||| ||| | ||| ||||||||   |||||||||||  || ||||||    
T  26009425 agtttactcctcgaaaggtttccggttcgattccctttggtgccaatttcagtgggctaagtccatgcagagcttactctggctttaaacggggcccccg 26009326  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||  ||||||||    
T  26009325 caagtgggtagtgggatt 26009308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 12317317 - 12317252
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaa 261  Q
    ||||| ||||||||||||  |||||||| |||| |||| | |||||||  ||||||||||||||||    
T  12317317 tcttggagtttgctcctcttgaggtctcgggtttgatttcatctggtgtcaatttcggtgggttaa 12317252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 37397743 - 37397803
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    ||||| |||||||||||||| |||||| ||||| ||||||| ||||||  ||||| |||||    
T  37397743 tcttggagtttgctcctccaaaggtctaaggtttgattccccctggtgtcaattttggtgg 37397803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 26174137 - 26174266
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| | |||||||||||||  ||||||||||    
T  26174137 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaa 26174236  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||||||||||||||    
T  26174237 atagggcccccgcaagtgggcggtgggatt 26174266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 15566666 - 15566544
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggcc 293  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| | |||||||||||||  ||||||||||| || |    
T  15566666 tcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggc 15566567  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    |||||||||||||||||||||||    
T  15566566 ccccgcaagtgggcggtgggatt 15566544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 29915474 - 29915314
Alignment:
Q  157 gtaacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    ||||||||||| ||||| | | ||||||| || ||||| ||||| |||||||||||||||||||||||||||||||| | |||||||| | |||||||||    
T  29915474 gtaacccatttagggttgacctaatggtt-gacttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgg 29915376  T
Q  257 gttaaattcatacagagcttg--ctggctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    | ||| | |||||||||||||  ||||||||||| || ||||||||||||||||||||||||    
T  29915375 gctaagtacatacagagcttgccctggctttaaacgggcccccgcaagtgggcggtgggatt 29915314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 29964627 - 29964467
Alignment:
Q  157 gtaacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    ||||||||||| ||||| | | ||||||| || ||||| ||||| |||||||||||||||||||||||||||||||| | |||||||| | |||||||||    
T  29964627 gtaacccatttagggttgacctaatggtt-gacttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgg 29964529  T
Q  257 gttaaattcatacagagcttg--ctggctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    | ||| | |||||||||||||  ||||||||||| || ||||||||||||||||||||||||    
T  29964528 gctaagtacatacagagcttgccctggctttaaacgggcccccgcaagtgggcggtgggatt 29964467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 35492935 - 35493064
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  35492935 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 35493034  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  35493035 acggggcccccgcaagtgggcggtgggatt 35493064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 30807326 - 30807196
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  30807326 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 30807227  T
Q  288 a--tggccccccgcaagtgggcggtgggatt 316  Q
    |   ||||||||||||||||||||| |||||    
T  30807226 acggggccccccgcaagtgggcggtaggatt 30807196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 25289887 - 25289758
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  25289887 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 25289788  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  25289787 acggggcccccgcaagtgggcggtgggatt 25289758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 26108316 - 26108445
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  26108316 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 26108415  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||| ||||||||    
T  26108416 acggggcccccgcaagtgggctgtgggatt 26108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 45529927 - 45529798
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| |||| ||| | |||||||||||||  ||||||||||    
T  45529927 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgatgggctaagtccatacagagcttgctctggctttaa 45529828  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  |||||||||||||||||||||||||||    
T  45529827 acgggccccccgcaagtgggcggtgggatt 45529798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 52821813 - 52821680
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | |||||||||||||  |||||    
T  52821813 ttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggc 52821714  T
Q  283 tttaaatggccccccgcaagtgggcggtgggatt 316  Q
    |||||| ||  ||||| |||||||||||||||||    
T  52821713 tttaaacggggccccgtaagtgggcggtgggatt 52821680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 53424349 - 53424221
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| | ||||||||| ||||  |||||||||    
T  53424349 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagtttgctatggctttaa 53424250  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
    | || |||||||||||| |||||||||||    
T  53424249 acgggcccccgcaagtgagcggtgggatt 53424221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 21362962 - 21363096
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| || ||| | |||||||||||||  |||||    
T  21362962 ttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggc 21363061  T
Q  283 tttaaatgg-ccccccgcaagtgggcggtgggatt 316  Q
    |||||| ||  ||||||||||||||||||||||||    
T  21363062 tttaaacggagcccccgcaagtgggcggtgggatt 21363096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 48977407 - 48977541
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| | |||||||||||||  |||||    
T  48977407 ttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctctggc 48977506  T
Q  283 tttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||||||  || |||| |||||||||||||||||||    
T  48977507 tttaaacggggcccctgcaagtgggcggtgggatt 48977541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 8456311 - 8456194
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||||  || ||||||    
T  8456311 agtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccg 8456212  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||| ||||||||    
T  8456211 caagtgggcagtgggatt 8456194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 46576372 - 46576501
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||| | |||||||||||||  ||||||||||    
T  46576372 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 46576471  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||||||||||||||||| |||||    
T  46576472 acggggcccccgcaagtgggcggtcggatt 46576501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 49258435 - 49258306
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  49258435 ttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 49258336  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||| ||||||||||||||||||    
T  49258335 acggggcccccacaagtgggcggtgggatt 49258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 34492748 - 34492619
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||| |||| ||| | |||||||||||||  ||||||||||    
T  34492748 ttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcgttgggctaagtccatacagagcttgctctggctttaa 34492649  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  34492648 acggggcccccgcaagtgggcggtgggatt 34492619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 40133610 - 40133493
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||| | |||||||||||||  |||||||||||  || ||||||    
T  40133610 agtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccg 40133511  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||||||||||||    
T  40133510 caagtgggcggtgggatt 40133493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 45272589 - 45272460
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| ||| | ||||| |||||||  ||||||||||    
T  45272589 ttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggctttaa 45272490  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  45272489 acggggcccccgcaagtgggcggtgggatt 45272460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 53234083 - 53233954
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||  |||||| |||    
T  53234083 ttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctctaa 53233984  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  53233983 acggggcccccgcaagtgggcggtgggatt 53233954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 18177054 - 18176931
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||  ||| | |||||||||||||  |||||||||||  ||     
T  18177054 tcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacgggg 18176955  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||    
T  18176954 cccccgcaagtgggcggtgggatt 18176931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 7470382 - 7470260
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggcc 293  Q
    ||||| |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||| ||| |||||||||||||||  ||||||||||| ||      
T  7470382 tcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacgggg 7470283  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    ||| |||||||||| ||||||||    
T  7470282 ccctgcaagtgggcagtgggatt 7470260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 10190915 - 10190786
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  10190915 ttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 10190816  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||| ||||||||||    
T  10190815 acggggcccccgcaagtggacggtgggatt 10190786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 25379785 - 25379914
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||| ||| ||| | |||||||||||||  ||||||||||    
T  25379785 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagtccatacagagcttgctctggctttaa 25379884  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||||||||| |||||||||||||    
T  25379885 acggggcccccgcaagcgggcggtgggatt 25379914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 30257648 - 30257773
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||||| |||  ||| | |||||||||||||  ||||||||||    
T  30257648 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagcttgctctggctttaa 30257747  T
Q  288 at-ggccccccgcaagtgggcggtgg 312  Q
    || || ||||||||||||||||||||    
T  30257748 atggggcccccgcaagtgggcggtgg 30257773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 39042025 - 39041896
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||| ||| | ||| |||||||||  ||||||||||    
T  39042025 ttgggatcttggagtttgctcctccagaggtctcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaa 39041926  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||||||||||||| |||||||||    
T  39041925 acggggcccccgcaagtgggtggtgggatt 39041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 40940849 - 40940938
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| | |||||||||||||||    
T  40940849 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgct 40940938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 8097436 - 8097323
Alignment:
Q  206 tgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaag 302  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||| | |||||||||| ||  |||||||||||  || ||||||||||    
T  8097436 tgctcctccagaggcctcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggctttaaacggggcccccgcaag 8097337  T
Q  303 tgggcggtgggatt 316  Q
    ||||||||||||||    
T  8097336 tgggcggtgggatt 8097323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 10083992 - 10083863
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  10083992 ttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 10083893  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||| ||||||| ||||||||||    
T  10083892 acggggcccccacaagtggacggtgggatt 10083863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 2511449 - 2511341
Alignment:
Q  211 ctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggc 307  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |  ||| |||||||  || || ||||||||||||    
T  2511449 ctccataggtctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggc 2511350  T
Q  308 ggtgggatt 316  Q
    |||||||||    
T  2511349 ggtgggatt 2511341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 7485703 - 7485574
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| ||| |||||    ||||||  |||||    
T  7485703 ttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggctaagttcat----agcttgatctggc 7485608  T
Q  283 tttaaatggccccccgcaagtgggcggtgggatt 316  Q
    ||||||  | |||| |||||||| ||||||||||    
T  7485607 tttaaacaggcccctgcaagtggccggtgggatt 7485574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 32151443 - 32151577
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||||||||||| |||| |||  |||||||| |||| |||| |||||||||||| |||  ||||||||||||||  |||||    
T  32151443 ttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgggctaagctcatacagagcttgctctggc 32151542  T
Q  283 tttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||||||  || ||||||||||||||||||| ||||    
T  32151543 tttaaacggggcccccgcaagtgggcggtgagatt 32151577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 31538005 - 31537882
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt--gctggctttaaatgg-c 292  Q
    ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||| ||| |  |||||||||||   ||||||||||| ||      
T  31538005 tcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaattttggtgggctaagtctatacagagcttactctggctttaaacggag 31537906  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    |||| |||||||||||||| ||||    
T  31537905 cccctgcaagtgggcggtgagatt 31537882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 1692864 - 1692986
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggcc 293  Q
    ||||| |||||||||||||||||||||||||||||||||| | | |||  |||||||||||  ||| |  ||||||| ||||  ||||||||| |  | |    
T  1692864 tcttggagtttgctcctccagaggtctcaggttcgattccatttagtgtcaatttcggtggactaagtctatacagaacttgctctggctttagacaggc 1692963  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    |||||||||||||||||||||||    
T  1692964 ccccgcaagtgggcggtgggatt 1692986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 33398642 - 33398512
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| ||||||||| || | || ||||| |||||||||||||| |||| ||||| |||||||||  | |||||||||||||  || ||||||    
T  33398642 tttgggatcttgtagtttgctcttctaaagatctcaagttcgattccctctagtgccaattttggtgggttatgtccatacagagcttgctctagcttta 33398543  T
Q  287 aa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||  || ||||||||||||||||||||||||    
T  33398542 aacggggcccccgcaagtgggcggtgggatt 33398512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 52455816 - 52455733
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||| |  | ||||||||||||    
T  52455816 tcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggctaagtctacacagagcttgct 52455733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 53288873 - 53288772
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaatggccccccgc 299  Q
    |||||||||||||| |||||||||| ||||||||||||||||| |||||||||||  ||| | |||||| |||||||  |||||||||| ||  ||||||    
T  53288873 agtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttcggtggactaagtccatacaaagcttgctttggctttaaacggggccccgc 53288774  T
Q  300 aa 301  Q
    ||    
T  53288773 aa 53288772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 19857081 - 19857164
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||  |||||||||||| ||| ||||   ||||||||||    
T  19857081 tcttggagtttgctcctccagatgtctcaggttcgattccctttggtgtcaatttcggtgggctaagttcagttagagcttgct 19857164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 51532825 - 51532942
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaat-ggccccccg 298  Q
    |||||||| ||||| |||||||| ||||||||| ||||  ||| |||||||||||| ||| | |||||||||||||  ||  |||||||| || ||||||    
T  51532825 agtttgcttctccaaaggtctcatgttcgattctctctaatgccaatttcggtgggctaagtccatacagagcttgctctaactttaaatgggacccccg 51532924  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||| ||||||||||    
T  51532925 caagtggacggtgggatt 51532942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 4462663 - 4462785
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt--gctggctttaaatggcc 293  Q
    ||||| |||||||| || || | |||||| ||||||||||||||||  | ||||||| |||| ||| ||||||||||||||   || |||||||| ||      
T  4462663 tcttggagtttgctacttcaaaagtctcatgttcgattccctctggcaccaatttcgatgggctaagttcatacagagcttactctagctttaaacgggg 4462762  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    |||||||||||| ||||||||||    
T  4462763 ccccgcaagtggacggtgggatt 4462785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 9853639 - 9853702
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcg 252  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||| | ||||| |||||||    
T  9853639 tttgggatcttggagtttgctcctccaaaggtctcaggttcgattcccaccggtgccaatttcg 9853702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 24407309 - 24407356
Alignment:
Q  214 cagaggtctcaggttcgattccctctggtgctaatttcggtgggttaa 261  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  24407309 cagaggtctcagattcgattctctctggtgctaatttcggtgggttaa 24407356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 38732996 - 38733079
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| |||||| ||||||||||||||||||| |||||| ||||| ||  |||||||||||| | | ||||||||||| |||||    
T  38732996 tcttggagtttgttcctccagaggtctcaggtccgattctctctgttgtcaatttcggtgggctgagttcatacagaggttgct 38733079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 48972854 - 48972795
Alignment:
Q  220 tctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||||||||||||||||||||||| ||||||| |||||||| |||||| |||| |||||    
T  48972854 tctcaggttcgattccctctggtgccaatttcgatgggttaagttcatatagagtttgct 48972795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 8958214 - 8958079
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgctg--gc 282  Q
    |||| ||||| ||||| ||| ||||||| || |||||| | |||||||| |||||||||  ||||| |||||| ||| | |||||| ||||||||   ||    
T  8958214 ttgacttgggatcttggagtctgctccttcaaaggtcttatgttcgatttcctctggtgtcaattttggtgggctaagtccatacaaagcttgctctagc 8958115  T
Q  283 tttaaat--ggccccccgcaagtgggcggtgggatt 316  Q
    ||||||   || ||||||||||||||||||||||||    
T  8958114 tttaaaatggggcccccgcaagtgggcggtgggatt 8958079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 55287839 - 55287887
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaattt 250  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  55287839 agtttgctccttcagaggtttcaggttcgattccctctggtgccaattt 55287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 25344235 - 25344101
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||  ||||||||||||||||| ||||||||| |||||||| |||||  |||||  ||||  ||| | ||||||||| |||  |||||    
T  25344235 ttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaatttttgtggtctaagtccatacagagtttgctctggc 25344136  T
Q  283 tttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||||||  || ||||||| |||||||| |||||||    
T  25344135 tttaaacggggcccccgctagtgggcgatgggatt 25344101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 1242036 - 1242122
Alignment:
Q  229 cgattccctctggtgctaatttcggtgggttaaattcatacagagctt---gctggctttaaatggccccccgcaagtgggcggtgg 312  Q
    |||||||||||||||| ||||| |||||| ||| | ||||||||||||    ||||||||||| ||   ||||||||||||||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtgg 1242122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 49167086 - 49167146
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    ||||| |||||||||||||| || | ||||||||||||| ||||||||  |||||||||||    
T  49167086 tcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtcaatttcggtgg 49167146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 11390632 - 11390715
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| |||||||| || | ||||||| |||| |||||||||  ||||| |||||| ||| | |||||||||||||||    
T  11390632 tcttggagttttctcctccaaagatttcaggtttgatttcctctggtgtcaattttggtgggctaagtccatacagagcttgct 11390715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 17579280 - 17579179
Alignment:
Q  219 gtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaatgg--ccccccgcaagtgggcggtggga 314  Q
    |||||||||| |||| ||||| ||| |||||| |||||| ||| | ||||||||||||||  | |||||||| ||  ||| |||||||||||||||| ||    
T  17579280 gtctcaggtttgatttcctctagtgttaattttggtgggctaagtccatacagagcttgctttagctttaaacgggaccctccgcaagtgggcggtgaga 17579181  T
Q  315 tt 316  Q
    ||    
T  17579180 tt 17579179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 10445157 - 10445123
Alignment:
Q  216 gaggtctcaggttcgattccctctggtgctaattt 250  Q
    ||||||||||||||||||| |||||||||||||||    
T  10445157 gaggtctcaggttcgattctctctggtgctaattt 10445123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 24165812 - 24165759
Alignment:
Q  265 catacagagcttgct--ggctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    |||||||||||||||  ||||||||| ||  |||||||||||||||||||||||    
T  24165812 catacagagcttgctctggctttaaacggggccccgcaagtgggcggtgggatt 24165759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 9842915 - 9843006
Alignment:
Q  159 aacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcg 252  Q
    |||||||||||||||  || | ||||| | |||||| ||||| ||||| |||||||||||||||| | |||||||||| ||||||  |||||||    
T  9842915 aacccatttggggttggtctagtggttgg-tttgggatcttggagttttctcctccagaggtctc-gattcgattcccactggtgtcaatttcg 9843006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 25017545 - 25017606
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| |||||||||||||| || ||| |||||||||||| ||| |||  ||||||||||||    
T  25017545 tcttggagtttgctcctccaaagatcttaggttcgattccatctagtgtcaatttcggtggg 25017606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 50583015 - 50583084
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggt 258  Q
    |||||| ||||| ||||||||||||   |||| |||||||||||| |||||| ||| ||||||| |||||    
T  50583015 tttgggatcttggagtttgctcctcttaaggtttcaggttcgatttcctctgttgccaatttcgttgggt 50583084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 191 - 309
Target Start/End: Original strand, 15016 - 15137
Alignment:
Q  191 tgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa 288  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||  |||||||||||    
T  15016 tgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgctaatttcggtgggttaagtccatccagagcttgctctggctttaaa 15115  T
Q  289 t-ggccccccgcaagtgggcgg 309  Q
    | ||||||||||||||||||||    
T  15116 tgggccccccgcaagtgggcgg 15137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 316
Target Start/End: Complemental strand, 13182 - 13091
Alignment:
Q  225 ggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgctggctttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||||||||||  |||||||  || ||||||||||||| ||||||||||    
T  13182 ggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgct-actttaaacggggcccccgcaagtggacggtgggatt 13091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 161833 - 161962
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||| |    
T  161833 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttta 161932  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||||||||||||||    
T  161933 atggggcccccgcaagtgggcggtgggatt 161962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 39349284 - 39349413
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  39349284 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 39349383  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  39349384 acggggcccccgcaagtgggcggtgggatt 39349413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 4718673 - 4718802
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  4718673 ttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 4718772  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  4718773 acggggcccccgcaagtgggcggtgggatt 4718802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 28193502 - 28193631
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||  ||||||||||    
T  28193502 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaa 28193601  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||  ||||||||||||||||||    
T  28193602 acggggcccctacaagtgggcggtgggatt 28193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 34237828 - 34237699
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  34237828 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 34237729  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||||||||||| |||||||||||    
T  34237728 acggggcccccgcaagtgagcggtgggatt 34237699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 311
Target Start/End: Complemental strand, 15259580 - 15259455
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||    
T  15259580 tttgggatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttta 15259481  T
Q  287 aa-tggccccccgcaagtgggcggtg 311  Q
    ||  || |||||||||||||||||||    
T  15259480 aacggggcccccgcaagtgggcggtg 15259455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 2618214 - 2618343
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||  |||||||||||||||||||| |||||| ||||| ||| | |||||||||||||  ||||||||||    
T  2618214 ttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaa 2618313  T
Q  288 atgg-ccccccgcaagtgggcggtgggatt 316  Q
    | ||  ||||||||||||||||||||||||    
T  2618314 acggagcccccgcaagtgggcggtgggatt 2618343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 3734796 - 3734667
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  3734796 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 3734697  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||| ||||| ||||||||    
T  3734696 acggggcccccgcaaatgggcagtgggatt 3734667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 21603270 - 21603387
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||   |||||||||||||  |||||||||||  || ||||||    
T  21603270 agtttgctcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggctttaaacggggcccccg 21603369  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||||||||||||    
T  21603370 caagtgggcggtgggatt 21603387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 32879277 - 32879436
Alignment:
Q  159 aacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggt 258  Q
    |||||||||||||||  || | ||||| || ||||| ||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||     
T  32879277 aacccatttggggttggtctagtggtt-gacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggc 32879375  T
Q  259 taaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||| |||||||||||||||  ||| | |||||  || ||||| ||||||||||||||||||    
T  32879376 taagttcatacagagcttgctctgacattaaacggggcccccacaagtgggcggtgggatt 32879436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 19471637 - 19471767
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| | ||| | |||||||||||||  ||||||||||    
T  19471637 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaa 19471736  T
Q  288 a--tggccccccgcaagtgggcggtgggatt 316  Q
    |   ||||||||||||||||||| |||||||    
T  19471737 acggggccccccgcaagtgggcgatgggatt 19471767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 19542561 - 19542691
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| | ||| | |||||||||||||  ||||||||||    
T  19542561 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaa 19542660  T
Q  288 a--tggccccccgcaagtgggcggtgggatt 316  Q
    |   ||||||||||||||||||| |||||||    
T  19542661 acggggccccccgcaagtgggcgatgggatt 19542691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 19590135 - 19590005
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| | ||| | |||||||||||||  ||||||||||    
T  19590135 ttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaa 19590036  T
Q  288 a--tggccccccgcaagtgggcggtgggatt 316  Q
    |   ||||||||||||||||||| |||||||    
T  19590035 acggggccccccgcaagtgggcgatgggatt 19590005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 14632982 - 14633071
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |  ||||||||||||||    
T  14632982 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgct 14633071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 8765693 - 8765570
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||| ||| | |||||||||||||  |||||||||||  ||     
T  8765693 tcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggg 8765594  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    | ||||||||||||||||||||||    
T  8765593 ctcccgcaagtgggcggtgggatt 8765570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 27746509 - 27746390
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||| | |||||||||||||  |||||||||    
T  27746509 tttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctctggcttta 27746410  T
Q  287 aatggccccccgcaagtggg 306  Q
    || ||  |||| ||||||||    
T  27746409 aaaggggccccacaagtggg 27746390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 28088309 - 28088443
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||| || |||||||||||||| ||||||||||| |||||  |||||||||||||||| | |||||||||||||  ||| |    
T  28088309 ttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttcggtgggttaagtccatacagagcttgctctgac 28088408  T
Q  283 tttaaat-ggccccccgcaagtgggcggtgggatt 316  Q
    ||||||| || || |||||||||||||||||||||    
T  28088409 tttaaatggggcctccgcaagtgggcggtgggatt 28088443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 42643296 - 42643162
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||| | |||||||||||||  ||| |    
T  42643296 ttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtc 42643197  T
Q  283 tttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    || |||  ||  |||||||||||||||||||||||    
T  42643196 ttgaaacgggggccccgcaagtgggcggtgggatt 42643162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 20305948 - 20306065
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| ||||||| |||| ||| | |||||||||||||  |||||||||||  || ||||||    
T  20305948 agtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccg 20306047  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||||||||||||    
T  20306048 caagtgggcggtgggatt 20306065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 20469945 - 20470074
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| | || ||||| | |||| ||| | |||||||||||||  ||||||||||    
T  20469945 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagagccaatttagatgggctaagtccatacagagcttgctctggctttaa 20470044  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  |  ||||||||||||||||||||||||    
T  20470045 acagagcccccgcaagtgggcggtgggatt 20470074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 21092581 - 21092698
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| ||||||| |||| ||| | |||||||||||||  |||||||||||  || ||||||    
T  21092581 agtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccg 21092680  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||||||||||||    
T  21092681 caagtgggcggtgggatt 21092698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 4698897 - 4698767
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||| | |||  ||| ||||  |||||||||    
T  4698897 tttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctctggcttta 4698798  T
Q  287 aatgg-ccccccgcaagtgggcggtgggatt 316  Q
    || ||  |||||||||||| |||||||||||    
T  4698797 aacggagcccccgcaagtgagcggtgggatt 4698767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 316
Target Start/End: Complemental strand, 6953153 - 6953051
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtggg 313  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||||  || ||||||||||| |||||||||    
T  6953153 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagttggcggtggg 6953054  T
Q  314 att 316  Q
    |||    
T  6953053 att 6953051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 264560 - 264444
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgc 299  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||| |  ||||| ||||||  ||||||||||| || ||||| |    
T  264560 agtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccac 264461  T
Q  300 aagtgggcggtgggatt 316  Q
    || ||||||||| ||||    
T  264460 aaatgggcggtgagatt 264444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 651361 - 651477
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgc 299  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||| |  ||||| ||||||  ||||||||||| || ||||| |    
T  651361 agtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccac 651460  T
Q  300 aagtgggcggtgggatt 316  Q
    || ||||||||| ||||    
T  651461 aaatgggcggtgagatt 651477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 837096 - 837212
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgc 299  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||| |  ||||| ||||||  ||||||||||| || ||||| |    
T  837096 agtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacgggcccccac 837195  T
Q  300 aagtgggcggtgggatt 316  Q
    || ||||||||| ||||    
T  837196 aaatgggcggtgagatt 837212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 189 - 316
Target Start/End: Original strand, 2166726 - 2166853
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||||||||  |||| |||||| || || ||| | |||||||||||||  |||||||||    
T  2166726 tttgggatcttggagtttgcttctccaaaggtctcaggttcgattccctc--gtgccaatttcagtaggctaagtccatacagagcttgctctggcttta 2166823  T
Q  287 aatggccccccgcaagtgggcggtgggatt 316  Q
    |||    |||||||||||||||||||||||    
T  2166824 aataagaccccgcaagtgggcggtgggatt 2166853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 18532135 - 18532264
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||  |||||||||||| ||| | |||||||| ||||  |||| |||||    
T  18532135 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtcaatttcggtgggctaagtccatacagaacttgctctggatttaa 18532234  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||| |||||||||||||| ||||    
T  18532235 acggggcccctgcaagtgggcggtgagatt 18532264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 42328033 - 42328161
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||| ||||||||||||| ||||||| ||||||||||| ||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  42328033 ttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 42328131  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||| ||||||| || |||||||    
T  42328132 acggggcccccacaagtggacgatgggatt 42328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 21667584 - 21667667
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| || ||||||||||| || | |||||||||||| ||| ||||||||||||||||||| ||| | |||||||||||||||    
T  21667584 tcttggaggttgctcctccaaagatttcaggttcgatttcctttggtgctaatttcggtgggctaagtccatacagagcttgct 21667667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 24018380 - 24018540
Alignment:
Q  159 aacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggt 258  Q
    |||| |||||||||| ||| | ||||| || ||||| ||||| |||||||||||||| |||||| |||||||||| |||||  ||  |||||| |||||     
T  24018380 aacctatttggggttgatctagtggtt-gacttgggatcttggagtttgctcctccaaaggtctgaggttcgatttcctctaatgtcaatttcagtgggc 24018478  T
Q  259 taaattcatacagagcttg--ctggctttaaatgg--ccccccgcaagtgggcggtgggatt 316  Q
    ||| | |||||||||||||  ||||||||||| ||  | |||| ||||||||||||| ||||    
T  24018479 taagtccatacagagcttgctctggctttaaacgggcctccccacaagtgggcggtgagatt 24018540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 24999289 - 24999391
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtggg 313  Q
    |||||| ||||||||||||||||| ||| ||||| | |||| ||| |||||| ||||||||  |||||||||||  || |||||||||||||||||||||    
T  24999289 aggtcttaggttcgattccctctgatgccaattttgatgggctaagttcatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtggg 24999388  T
Q  314 att 316  Q
    |||    
T  24999389 att 24999391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 25248407 - 25248504
Alignment:
Q  220 tctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||  ||||||||| || | || |||||||||| |||  ||||||||||| || ||| ||||||||||||||||||||    
T  25248407 tctcaggttcgattccctctggtgtcaatttcggtaggct-aagtcatacagagtttgctctggctttaaacgggccctcgcaagtgggcggtgggatt 25248504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 306
Target Start/End: Complemental strand, 26169021 - 26168903
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||   |||||||||||| ||||||  ||| ||| ||||||||||||  || |||||||||||||||  ||||||||||    
T  26169021 ttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtggg-caagttcatacagagcttgttctggctttaa 26168923  T
Q  288 atg-gccccccgcaagtggg 306  Q
    ||| ||||| ||||||||||    
T  26168922 atgagcccctcgcaagtggg 26168903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 310
Target Start/End: Complemental strand, 34610848 - 34610737
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatg-gccccccg 298  Q
    |||||| || |||||| |||| ||||||||||||||||| ||| |||||||||||  ||| |  ||||||||||||  ||||||||||| | ||||| ||    
T  34610848 agtttgttcatccagatgtctgaggttcgattccctctgatgccaatttcggtggtctaagtctatacagagcttgctctggctttaaacgagcccctcg 34610749  T
Q  299 caagtgggcggt 310  Q
    ||||||||||||    
T  34610748 caagtgggcggt 34610737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 7558116 - 7558049
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| ||||| |||||||||||||||| ||||||| ||||||| |||||||||| ||||| ||||||    
T  7558116 ttgggatcttggagtttgctcctccagaagtctcagattcgatttcctctggtgccaattttggtggg 7558049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 34694743 - 34694664
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    ||||| ||||||||||||   |||||| |||||||||||| |||||||| ||||||||||||  ||||||||||| |||||    
T  34694743 tcttggagtttgctcctctcaaggtcttaggttcgattccatctggtgccaatttcggtggg-caaattcatacaaagctt 34694664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 36848927 - 36848794
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct--ggc 282  Q
    |||| ||||||| ||| ||||||||||||   |||| | || ||| ||| |||||||||| |||||||||||| ||| | ||||| ||| |||||  |||    
T  36848927 ttgacttgggtttttggagtttgctcctctcaaggttttagattccatttcctctggtgccaatttcggtgggctaagtccatacggagtttgctcgggc 36848828  T
Q  283 tttaaatggccccccgcaagtgggcggtgggatt 316  Q
    ||||||||   | || ||||||||||||||||||    
T  36848827 tttaaatgaggcaccacaagtgggcggtgggatt 36848794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 3794825 - 3794882
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcgg 253  Q
    ||||||||||||||||||   |||||||| ||||| ||||||||||||| ||||||||    
T  3794825 tcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcgg 3794882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 10292108 - 10292211
Alignment:
Q  215 agaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtg 311  Q
    |||||||||||||||||||||||||| ||| |||||| ||||| | | | ||| ||||| |||  |||||||||||  || ||||| |||||||||||||    
T  10292108 agaggtctcaggttcgattccctctgatgccaatttcagtgggctgagtccat-cagagattgctctggctttaaacggggcccccacaagtgggcggtg 10292206  T
Q  312 ggatt 316  Q
    |||||    
T  10292207 ggatt 10292211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 18128536 - 18128670
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt---gctgg 281  Q
    |||| ||||| ||||||||| |||||||    |||||| || |||||||| ||||||||| ||||||||||||   ||| |||| |||||||    ||||    
T  18128536 ttgacttgggatcttgaagtgtgctcctttcaaggtcttagattcgattctctctggtgccaatttcggtggg-cgaatccataaagagctttgctctgg 18128634  T
Q  282 ctttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    |||||||  || ||||||||||||||||||||||||    
T  18128635 ctttaaacggggcccccgcaagtgggcggtgggatt 18128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 28964073 - 28964182
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagct-tg-ctggctttaaa-tggccccccg 298  Q
    ||||||||||||   |||| ||| |||||||||| |||||||| |||||||||||| ||| | ||||| ||||| || |||||||||||  || ||||||    
T  28964073 agtttgctcctcttaaggtttcatgttcgattccatctggtgccaatttcggtgggctaagtccatacggagctatgtctggctttaaacggggcccccg 28964172  T
Q  299 caagtgggcg 308  Q
    ||||||||||    
T  28964173 caagtgggcg 28964182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 34639379 - 34639295
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    ||||| ||||| ||| ||||||||   |||||||||| ||||| ||||||||||| |||||||||||| ||| | ||||||||||||    
T  34639379 ttgggatcttggagtgtgctcctctcaaggtctcaggctcgat-ccctctggtgccaatttcggtggg-taagtccatacagagctt 34639295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 316
Target Start/End: Original strand, 12312965 - 12313002
Alignment:
Q  279 tggctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  12312965 tggctttaaatgggcccccacaagtgggcggtgggatt 12313002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 6536579 - 6536623
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaa 261  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||    
T  6536579 aggtctcaggttcaattctctctggtgccaatttaggtgggttaa 6536623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 2103083 - 2103212
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| | |||||||||||||  ||||||||||    
T  2103083 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 2103182  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||||||||||||||    
T  2103183 atggggcccccgcaagtgggcggtgggatt 2103212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 7176035 - 7175906
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  7176035 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 7175936  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  7175935 acaggacccccgcaagtgggcggtgggatt 7175906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 7275305 - 7275434
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  7275305 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 7275404  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  7275405 acagggcccccgcaagtgggcggtgggatt 7275434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 22119916 - 22120045
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  22119916 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 22120015  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  22120016 acggggcccccgcaagtgggcggtgggatt 22120045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 40543083 - 40542954
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  40543083 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 40542984  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  40542983 acggggcccccgcaagtgggcggtgggatt 40542954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 204 - 316
Target Start/End: Complemental strand, 654863 - 654749
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgcaa 301  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||| || |||||||||    
T  654863 tttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccgcaa 654764  T
Q  302 gtgggcggtgggatt 316  Q
    |||||||||||||||    
T  654763 gtgggcggtgggatt 654749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 10091184 - 10091345
Alignment:
Q  157 gtaacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    |||||||||||||||||  || | ||| |||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  10091184 gtaacccatttggggttggtctagtgg-ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgg 10091282  T
Q  257 gttaaattcatacagagcttg--ctggctttaaat-ggccccccgcaagtgggcggtgggatt 316  Q
    | ||| | |||||||||||||  |||||||||||| ||  |||||||||||||||||||||||    
T  10091283 gctaagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggatt 10091345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 21835179 - 21835308
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  21835179 ttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 21835278  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  21835279 acggggcccccgcaagtgggcggtgggatt 21835308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 2751299 - 2751428
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  2751299 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 2751398  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||| ||||||||||||||    
T  2751399 acggggcccccgcaaatgggcggtgggatt 2751428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 11997877 - 11998006
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||| || ||| | |||||| ||||||  ||||||||||    
T  11997877 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagcttgctctggctttaa 11997976  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    | ||| ||||||||||||||||||||||||    
T  11997977 actgggcccccgcaagtgggcggtgggatt 11998006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 21218006 - 21217877
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| | |||||||||||||  || |||||||    
T  21218006 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagcttgctctagctttaa 21217907  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  |||||||| ||||||||||||||||||    
T  21217906 acgggccccccacaagtgggcggtgggatt 21217877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 22703514 - 22703643
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| | |||||| ||||||  ||||||||||    
T  22703514 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctggctttaa 22703613  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  22703614 acgggacccccgcaagtgggcggtgggatt 22703643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 27704036 - 27704158
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaatggcc 293  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||||||| ||| | |||| |||||||||  ||||||||||||| |    
T  27704036 tcttgaagtttgctcctacagaggtctcaggttcgatttcctttggtgccaatttcggtgggctaagtccatagagagcttgctttggctttaaatggac 27704135  T
Q  294 ccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||| |||| ||||    
T  27704136 ccccgcaagtgggtggtgtgatt 27704158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 7800005 - 7799902
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |||| |||||||||  |||||||||    
T  7800005 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggttaagtccatagagagcttgctatggctttaa 7799906  T
Q  288 atgg 291  Q
    ||||    
T  7799905 atgg 7799902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 17197117 - 17196994
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||| | ||| | |||||||||||||  |||||||||||  ||     
T  17197117 tcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgggg 17197018  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||    
T  17197017 cccccgcaagtgggcggtgggatt 17196994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 23012681 - 23012552
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||| |||||||||||| ||||| |||||||||| |||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  23012681 ttgggatcttggagtttgcttctccagaggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 23012582  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||| ||||||||||||||||||    
T  23012581 atggggcccccacaagtgggcggtgggatt 23012552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 29861711 - 29861827
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||| ||||  |||||||||||  || ||||||    
T  29861711 agtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccg 29861809  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||||||||||||    
T  29861810 caagtgggcggtgggatt 29861827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 16374033 - 16374151
Alignment:
Q  201 aagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaa-tggcccccc 297  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||  ||||  ||||||||||  || |||||    
T  16374033 aagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggctttaaacgggaccccc 16374132  T
Q  298 gcaagtgggcggtgggatt 316  Q
    |||| ||| ||||||||||    
T  16374133 gcaaatggacggtgggatt 16374151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 312
Target Start/End: Original strand, 18044135 - 18044260
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  18044135 ttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 18044234  T
Q  288 a-tggccccccgcaagtgggcggtgg 312  Q
    |  || ||||| |||||||| |||||    
T  18044235 acggggcccccacaagtgggtggtgg 18044260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 28950911 - 28951028
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccg 298  Q
    ||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| ||| |||||| ||||||||  |||||||||||  || ||| ||    
T  28950911 agtttgctccttcagaggtctcaggttcgactccctctggtgccaatttcggtgggctaagttcatatagagcttgctctggctttaaacgggtccctcg 28951010  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||| ||||||||||||    
T  28951011 caagtcggcggtgggatt 28951028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 31273937 - 31274070
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||| ||| | |||||||||||||  |||||    
T  31273937 ttgacttgggatcttggagtttgctcctccagagctctcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagcttgctctggc 31274036  T
Q  283 tttaaatggccccccgcaagtgggcggtgggatt 316  Q
    |||||| ||  | |||||||||||| ||| ||||    
T  31274037 tttaaacggggctccgcaagtgggcagtgagatt 31274070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 27009393 - 27009476
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||| | |||||||||||||||    
T  27009393 tcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaatttcggtgggctaagtccatacagagcttgct 27009476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 28089850 - 28089968
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcataca----gagcttg--ctggctttaaat 289  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||  |||||||||||| ||| | ||||||    |||||||  ||||||||||||    
T  28089850 tcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaaat 28089949  T
Q  290 ggccccccgcaagtgggcg 308  Q
    || ||||||||||||||||    
T  28089950 gggcccccgcaagtgggcg 28089968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 17212081 - 17212170
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||| | ||||||||| |||||    
T  17212081 ttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaagtccatacagagattgct 17212170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 22638332 - 22638445
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct--ggctttaaatggcccc-ccg 298  Q
    ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| ||||    |||||||||  ||||||||| ||  || |||    
T  22638332 agtttgctctttcaaaggtctcaggttcgattccctctggtgctaatttcggtgggttaagttca----gagcttgctctggctttaaacggggcctccg 22638427  T
Q  299 caagtgggcggtgggatt 316  Q
    ||||||||||||||||||    
T  22638428 caagtgggcggtgggatt 22638445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 22299877 - 22299944
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  22299877 ttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtggg 22299944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 39145830 - 39145696
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcat-acagagcttg--ctgg 281  Q
    |||| ||||| ||||| |||||||||||||||| ||||  ||||||||||||| |||||| |||||||||||| ||| |  || ||||||||||  ||||    
T  39145830 ttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctgg 39145731  T
Q  282 ctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    ||||||| || |||| |||||||| ||||||||||    
T  39145730 ctttaaacgggcccctgcaagtggacggtgggatt 39145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 13332596 - 13332510
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    ||||| ||||| ||||||||||||| |||||||||||| ||||||||||||| || |||||||||||| ||| | ||||||||||||    
T  13332596 ttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctggagccaatttcggtgggctaagtccatacagagctt 13332510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 19421259 - 19421388
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||| | |||||||  ||||||| |||| ||| | |||||||||||||  ||| ||||||    
T  19421259 ttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagcttgctctgactttaa 19421358  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || | ||| ||||||||||||||||||    
T  19421359 atggggcgcccacaagtgggcggtgggatt 19421388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 314
Target Start/End: Complemental strand, 14199844 - 14199713
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||  ||| ||||| |||||| ||| |  ||| ||||||||  ||| |    
T  14199844 ttgatttggaatcttggagtttcctcctccagaggtctcaggttcgattccctctaatgccaattttggtgggctaagtctatatagagcttgctctgcc 14199745  T
Q  283 tttaaatggccccccgcaagtgggcggtggga 314  Q
    |||||| ||  ||||||||||||| |||||||    
T  14199744 tttaaacggggccccgcaagtgggtggtggga 14199713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 2344327 - 2344456
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct--ggctttaa 287  Q
    ||||| ||||| |||||||||||||| || |||||| ||||||||| |||||||| ||||| |||||| ||| | ||||||||||||  |  ||||||||    
T  2344327 ttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaattttggtgggctaagtccatacagagctttttttggctttaa 2344426  T
Q  288 atggc-cccccgcaagtgggcggtgggatt 316  Q
    | ||  |||||||||||| |||||||||||    
T  2344427 acgggacccccgcaagtgagcggtgggatt 2344456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 42814887 - 42814981
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||| ||||| ||||| ||||||||||||  || |||||||||||||||||||||||||  |||||||||||| ||| | |||||| ||||||||    
T  42814887 ttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgct 42814981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 42913686 - 42913557
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||| | | |||||| ||||||| |||| ||| | ||||| || ||||  ||||||||||    
T  42913686 ttgggatcttggagtttgctcctctagaggtctcaggttcgatttcatatggtgccaatttcgatgggataagtccatacggaacttgctctggctttaa 42913587  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||| ||||||||||    
T  42913586 acggggcccccgcaagtggacggtgggatt 42913557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 316
Target Start/End: Complemental strand, 41907659 - 41907557
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatg-gccccccgcaagtgggcggtggg 313  Q
    |||||||||||||||||| ||||||||| |||||| ||||| ||| | ||||||||| |||  ||||||||||| | | |||||||||||||| ||||||    
T  41907659 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtggg 41907560  T
Q  314 att 316  Q
    |||    
T  41907559 att 41907557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 27312180 - 27312309
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagct--tgctggctttaa 287  Q
    ||||| ||||| |||||||||||| |||||| |||||||||||||||||| |||| ||||||| || |  || | |||||||||||    ||| ||||||    
T  27312180 ttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctacctctgactttaa 27312279  T
Q  288 atgg-ccccccgcaagtgggcggtgggatt 316  Q
    | ||  ||||||||||||||||||||||||    
T  27312280 acggagcccccgcaagtgggcggtgggatt 27312309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 22696343 - 22696415
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||| ||||| ||| ||||||||   |||||||||||| ||||||||||||||| ||||||||||||    
T  22696343 ttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg 22696415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 36772469 - 36772351
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| |||||||||||| |||||||||||||| |||| || ||  ||| |||||||||||| ||| |||||||||||||||  |||||||||||  ||     
T  36772469 tcttggagtttgctcctctagaggtctcaggtttgatttccccta-tgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacgggg 36772371  T
Q  293 cccccgcaagtgggcggtgg 312  Q
    ||||||  ||||||||||||    
T  36772370 cccccgggagtgggcggtgg 36772351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 25333447 - 25333518
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaa 261  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| ||||||||  | ||||||| ||||||||    
T  25333447 ttgggatcttggagtttgcttctccagaggtctcaggttcgataccctctggcaccaatttcgttgggttaa 25333518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 32849589 - 32849722
Alignment:
Q  159 aacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggt 258  Q
    ||||||||||||||||  | | ||||| || ||||| ||||| |||||||||||||||||||||| |||| |||||||||| ||   ||||| ||||||     
T  32849589 aacccatttggggttagcctagtggtt-gacttgggatcttggagtttgctcctccagaggtctcgggtttgattccctctagtctcaattttggtgggc 32849687  T
Q  259 taaattcatacagagcttg--ctggctttaaatgg 291  Q
    ||| | || || |||||||  ||||||||||||||    
T  32849688 taagtccacactgagcttgctctggctttaaatgg 32849722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 9718148 - 9718071
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||||||||||||| | |||||| ||||||||||||||||||  ||||||| |||| ||| | |||| ||||||||||    
T  9718148 agtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagcttgct 9718071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 43785502 - 43785386
Alignment:
Q  159 aacccatttggggttaatccaatggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggt 258  Q
    ||||||||||||||| | | ||||||| | || ||| ||||  || ||||||||||| |||||||| ||||||||||| || ||||||||||| ||||      
T  43785502 aacccatttggggttgacctaatggttggctt-gggatctttgagattgctcctccaaaggtctcaagttcgattcccacttgtgctaatttcagtggac 43785404  T
Q  259 taaattcatacagagctt 276  Q
    ||| | ||||||||||||    
T  43785403 taagtccatacagagctt 43785386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 23854424 - 23854468
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattc 234  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||    
T  23854424 ttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 28647024 - 28647064
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  28647024 aggtctcaggttcgattccctctggtgccaatttcggtggg 28647064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 23092167 - 23092253
Alignment:
Q  233 tccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||||  || ||||||||| ||| ||||||||||    
T  23092167 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggatt 23092253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 6491675 - 6491724
Alignment:
Q  230 gattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||||||||||||  ||||||| |||| |||||||||||||||||||||    
T  6491675 gattccctctggtgtcaatttcgatgggctaaattcatacagagcttgct 6491724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 22643515 - 22643426
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||||||||| |||| | |||||||| | |||||||| |||||| ||  ||||||||| || ||| | |||||||||||||||    
T  22643515 ttgggatcttgaagtttactccactagaggtcttatgttcgatttcctctgatgtcaatttcggtaggctaagtccatacagagcttgct 22643426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 40332133 - 40332194
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| |||||||||||| | ||||||||||||||||| |||||||||  ||||||| ||||    
T  40332133 tcttggagtttgctcctctaaaggtctcaggttcgatttcctctggtgtcaatttcgatggg 40332194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 21558187 - 21558231
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaa 261  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||    
T  21558187 aggtctcaggttcgattctctctggtgccaatttaggtgggttaa 21558231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 31713069 - 31713014
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgc 244  Q
    |||||| ||||| |||||||||||| |||||||||||| | |||| ||||||||||    
T  31713069 tttgggatcttggagtttgctcctcgagaggtctcaggattgatttcctctggtgc 31713014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 3851841 - 3851914
Alignment:
Q  246 aatttcggtgggttaaattcatacagagcttgct--ggctttaaatggc-cccccgcaagtgggcggtgggatt 316  Q
    |||||||||||| ||| | |||| ||||||||||  ||||||||| ||  ||||||||||||||||||||||||    
T  3851841 aatttcggtgggctaagtccatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 3851914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 9683866 - 9683940
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    |||||||||||| ||||||||||||    ||||||||| |||| |||||||||||| ||| | ||||| ||||||    
T  9683866 agtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgggctaagtccataccgagctt 9683940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 21370624 - 21370674
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctct 239  Q
    |||||| ||||| ||||| ||||| |||| |||||||||||||||||||||    
T  21370624 tttgggatcttggagtttactccttcagatgtctcaggttcgattccctct 21370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 8435873 - 8435801
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||| ||||| ||||| |||||||||||    || ||| |||||||||| |||||||||| ||||||||||||    
T  8435873 ttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctctggtgccaatttcggtggg 8435801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 23330885 - 23330845
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||||||||||| |||||| ||||| ||||||||||||    
T  23330885 aggtctcaggttcgactccctccggtgccaatttcggtggg 23330845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 35173190 - 35173138
Alignment:
Q  205 ttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||||||||| |||||||||||| |||| |||||| ||  ||||||||||||    
T  35173190 ttgctcctccaaaggtctcaggtttgatttcctctgatgtcaatttcggtggg 35173138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 1229 - 1100
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| | |||||||||||||  ||||||||||    
T  1229 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 1130  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||| ||||||||||    
T  1129 atggggcccccgcaagtggacggtgggatt 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 9472 - 9343
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| | |||||||||||||  ||||||||||    
T  9472 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 9373  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||| ||||||||||    
T  9372 atggggcccccgcaagtggacggtgggatt 9343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 12173 - 12045
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||||| || |||||||||||| ||| | |||||||||||||  ||||||||||    
T  12173 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 12074  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
    ||||  |||| ||||||| ||||||||||    
T  12073 atggggccccacaagtggacggtgggatt 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 32986221 - 32986350
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| | |||||||||||||  ||| ||||||    
T  32986221 ttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaa 32986320  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||||||||||||||    
T  32986321 atggggcccccgcaagtgggcggtgggatt 32986350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 33696452 - 33696323
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  33696452 ttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 33696353  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||||||||| ||||    
T  33696352 atggggcccccgcaagtgggcggtgagatt 33696323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 34844925 - 34844802
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||  |||||||||||  ||     
T  34844925 tcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggg 34844826  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||    
T  34844825 cccccgcaagtgggcggtgggatt 34844802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 52983649 - 52983772
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||| | |||||||||||||  |||||||||||  ||     
T  52983649 tcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacgggg 52983748  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||    
T  52983749 cccccgcaagtgggcggtgggatt 52983772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 27528968 - 27528839
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta- 286  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||     
T  27528968 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttat 27528869  T
Q  287 aatggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||| ||||    
T  27528868 acggggcccccgcaagtgggcggtgagatt 27528839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 40059025 - 40058896
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  40059025 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 40058926  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  40058925 acggggcccccgcaagtgggcggtgggatt 40058896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 19660705 - 19660576
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  19660705 ttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatgcaaatttcggtgggataagtccatacagagcttgctctggctttaa 19660606  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  19660605 acagggcccccgcaagtgggcggtgggatt 19660576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 20078157 - 20078028
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  20078157 ttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 20078058  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||||| |||||||||||||||||    
T  20078057 acggggcccccgtaagtgggcggtgggatt 20078028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 46714416 - 46714546
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcga-ttccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    ||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| ||| | |||||||||||||  || ||||||    
T  46714416 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgggctaagtccatacagagcttgcccttgcttta 46714515  T
Q  287 aa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||  || ||||||||||||||||||||||||    
T  46714516 aacggggcccccgcaagtgggcggtgggatt 46714546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 5609375 - 5609246
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||| | ||| ||||||||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  5609375 ttgggatcttggagtttgctcattcagtggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 5609276  T
Q  288 at-ggccccccgcaagtgggcggtgggatt 316  Q
    || || ||||||||||||| ||||||||||    
T  5609275 atggggcccccgcaagtggacggtgggatt 5609246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 54127515 - 54127386
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||| ||| |  ||||||||||||  ||||||||||    
T  54127515 ttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctggctttaa 54127416  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  54127415 acggggcccccgcaagtgggcggtgggatt 54127386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 25852238 - 25852327
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||    
T  25852238 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgct 25852327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 33992649 - 33992773
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||| | |||||| ||||||  |||||||||    
T  33992649 tttgggatcttggagtttgctcctccagaggtcttaggttcgattctctctggtgccaatttcggtgggctaagtccatacatagcttgctctggcttta 33992748  T
Q  287 aa-tggccccccgcaagtgggcggt 310  Q
    ||  || ||||||||||||||||||    
T  33992749 aacggggcccccgcaagtgggcggt 33992773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 20566373 - 20566503
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtc-tcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    ||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||  || | |||||||||||||  |||||||||    
T  20566373 ttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctggcttta 20566472  T
Q  287 aatgg-ccccccgcaagtgggcggtgggatt 316  Q
    || ||  |||||||||||||||| |||||||    
T  20566473 aacggagcccccgcaagtgggcgctgggatt 20566503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 49287881 - 49288002
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggcttta 286  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| | |||||| |  ||||  ||||||||    
T  49287881 tttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgctatggcttta 49287980  T
Q  287 aatggccccccgcaagtgggcg 308  Q
    || || | ||||||||||||||    
T  49287981 aacgggctcccgcaagtgggcg 49288002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 2351043 - 2351124
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||| |||||| ||||||    
T  2351043 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtcgactaaatccatacatagcttg 2351124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 7392136 - 7392009
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||||||| |||||| | ||||||||| |||  ||||||||||    
T  7392136 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcggt-ggttaagtccatacagagtttgctctggctttaa 7392038  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
    ||||  ||||   ||||||||||||||||    
T  7392037 atgggacccccatagtgggcggtgggatt 7392009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 22625243 - 22625154
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||||| ||| | |||||||||||||||    
T  22625243 ttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgct 22625154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 204 - 316
Target Start/End: Complemental strand, 45787863 - 45787748
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgca 300  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||| ||||| ||| | |||||||||||||  |||||||||||  || ||||||||    
T  45787863 tttgctcctccagagatctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacagggcccccgca 45787764  T
Q  301 agtgggcggtgggatt 316  Q
    ||||| ||||||||||    
T  45787763 agtggacggtgggatt 45787748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 44343529 - 44343667
Alignment:
Q  181 tggtttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct- 279  Q
    |||||||  ||||| ||||| |||||||||| ||| ||| |||| ||||||||||||||||||||||||| |||||| ||| | |||||||||||||||     
T  44343529 tggtttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgctaattttggtgggctaagtccatacagagcttgctc 44343628  T
Q  280 -ggctttaaatggccc-cccgcaagtgggcggtgggatt 316  Q
     | ||||||| ||  | ||||||||||||||||||||||    
T  44343629 tgactttaaacggggctcccgcaagtgggcggtgggatt 44343667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 51535632 - 51535774
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg----ttaaattcatacagagcttg--- 277  Q
    |||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||    |||| | |||||||||||||       
T  51535632 ttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaattttggtgggctaattaagtccatacagagcttgcag 51535731  T
Q  278 --ctggctttaaa--tggccccccgcaagtgggcggtgggatt 316  Q
      |||||||||||   ||||||| |||||||||||||||||||    
T  51535732 ctctggctttaaacggggcccccagcaagtgggcggtgggatt 51535774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 13873468 - 13873379
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||| || ||| ||||||||||| |||||    
T  13873468 ttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttcggtaggctaagttcatacagagtttgct 13873379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 35674914 - 35674786
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||| |||| ||||| ||||||||||||||||||| || |||||||||||| ||| | |||||||||||||  ||| ||||||    
T  35674914 ttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctgcctttaa 35674815  T
Q  288 a-tggccccccgcaagtgggcggtgggat 315  Q
    |  || |||||||||||||||||| ||||    
T  35674814 acggggcccccgcaagtgggcggttggat 35674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 190 - 273
Target Start/End: Original strand, 1985860 - 1985943
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagag 273  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| ||| | |||||||||    
T  1985860 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgcgaatttcgatgggctaagtccatacagag 1985943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 43719232 - 43719154
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagc 274  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||| | ||||||||||    
T  43719232 tcttggagtttgctcctccagaggtttcaggttcgattctctctagtgctaatttcggtgggctaagtccatacagagc 43719154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 32990488 - 32990588
Alignment:
Q  219 gtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtgggat 315  Q
    ||||||||||||||||||| | |||| |||||||||||| ||| | |||||||||||||  |||||||||||  || |||||||||||||||||||||||    
T  32990488 gtctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggat 32990587  T
Q  316 t 316  Q
    |    
T  32990588 t 32990588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 34723848 - 34723952
Alignment:
Q  215 agaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgggcggtg 311  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||| | |||||| ||||||  |||||||||||  || |||||||||||||| ||||    
T  34723848 agaggcctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtg 34723947  T
Q  312 ggatt 316  Q
    |||||    
T  34723948 ggatt 34723952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 12500231 - 12500108
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||| || |||||||||||| ||||||||||||||| ||||||  |||| ||| | |||||| ||||||  ||||||||||    
T  12500231 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaa 12500132  T
Q  288 a-tggccccccgcaagtgggcggt 310  Q
    |  || ||||||||||||||||||    
T  12500131 acgggacccccgcaagtgggcggt 12500108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 32942400 - 32942523
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt--gctggctttaaatgg-c 292  Q
    ||||| ||||| ||||||||||||| | ||||||||||| ||||| ||| |||||||||||| ||| | ||||||||||||   ||||||||||| || |    
T  32942400 tcttggagtttactcctccagaggtttaaggttcgattctctctgatgccaatttcggtgggctaagtccatacagagcttactctggctttaaacggcc 32942499  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||| ||||||| ||||||||||    
T  32942500 cccccacaagtggacggtgggatt 32942523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 35229192 - 35229321
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| |||  ||| |||||||||||| ||| | |||||| ||||||  ||| ||||||    
T  35229192 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccttct-atgccaatttcggtgggctaagtccatacatagcttgctctgactttaa 35229290  T
Q  288 atgg--ccccccgcaagtgggcggtgggatt 316  Q
    | ||  |||||| |||||| |||||||||||    
T  35229291 acgggtccccccacaagtgagcggtgggatt 35229321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 311
Target Start/End: Original strand, 27574356 - 27574466
Alignment:
Q  204 tttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttt-aaatggccccccgca 300  Q
    |||||||||||| |||||||||||||||||  ||||  | | ||||||||| || |||||||||||||||||||  |||||||| ||| || ||||||||    
T  27574356 tttgctcctccataggtctcaggttcgattttctcttattccaatttcggtaggctaaattcatacagagcttgctctggctttaaaaggggcccccgca 27574455  T
Q  301 agtgggcggtg 311  Q
    |||||||||||    
T  27574456 agtgggcggtg 27574466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 316
Target Start/End: Complemental strand, 36131664 - 36131554
Alignment:
Q  209 tcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgc--tggctttaaa-tggccccccgcaagtgg 305  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||  ||| | ||||||||||||||  || |||||||  || |||||| ||||||    
T  36131664 tcctccagatgtctcaggttcgattccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaaacgggacccccgtaagtgg 36131565  T
Q  306 gcggtgggatt 316  Q
    |||||||||||    
T  36131564 gcggtgggatt 36131554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 18875659 - 18875561
Alignment:
Q  220 tctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||| ||  |||||||||||| ||| | |||||||||||||  ||||||||||| || ||||| ||||||||  ||||||||    
T  18875659 tctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggcccccacaagtgggtagtgggatt 18875561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 34835565 - 34835675
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagct-tg-ctggctttaaat--ggcccccc 297  Q
    ||||||||||||   |||||||| ||||||||||||||||||  |||||||||||| ||| | ||||| ||||| || ||||||||||||  ||||||||    
T  34835565 agtttgctcctcttaaggtctcatgttcgattccctctggtgtcaatttcggtgggctaagtccatacggagctatgtctggctttaaatagggcccccc 34835664  T
Q  298 gcaagtgggcg 308  Q
    |||||||||||    
T  34835665 gcaagtgggcg 34835675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 30879339 - 30879210
Alignment:
Q  189 tttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggcttta 286  Q
    |||||| ||||| ||||||||||| ||  ||| | ||||| ||||||||||||||| ||||||| |||||||||| |||||| || |||  |||||||||    
T  30879339 tttgggatcttgtagtttgctccttcatgggttttaggtttgattccctctggtgccaatttcgatgggttaaatccatacaaagtttgctctggcttta 30879240  T
Q  287 aatggccccccgcaagtgggcggtgggatt 316  Q
    || ||   || |||||||| ||||||||||    
T  30879239 aagggggtcctgcaagtggacggtgggatt 30879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 20527194 - 20527119
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg 277  Q
    |||||| |||||||||||||||| ||| |||||||||||| || |||||||||||| ||| | |||| ||||||||    
T  20527194 agtttgttcctccagaggtctcaagtttgattccctctggcgccaatttcggtgggctaagtccatatagagcttg 20527119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 9517787 - 9517725
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||||||||||||||||| ||||||||| |||||| ||||| ||| | |||||||||||||||    
T  9517787 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgct 9517725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 13584415 - 13584338
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttgct 279  Q
    |||||||||||||| | |||||| ||||||||||||||||||  ||||||| |||| ||| | |||| ||||||||||    
T  13584415 agtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagcttgct 13584338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 21387639 - 21387532
Alignment:
Q  209 tcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaagtgg 305  Q
    |||||||||| |||||||||||||||||| | |||  ||||| |||||| ||| |  ||||||||||||  |||||||||||  ||  ||||||||||||    
T  21387639 tcctccagagatctcaggttcgattccctatagtgtcaattttggtgggctaagtctatacagagcttgctctggctttaaacgggatccccgcaagtgg 21387540  T
Q  306 gcggtggg 313  Q
    ||||||||    
T  21387539 gcggtggg 21387532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 55961881 - 55961798
Alignment:
Q  235 cctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatggccccccgcaagtgggcggtgggatt 316  Q
    |||||||||| |||||||||||| ||| | |||||||||||||  ||| ||||||| ||  |||| ||||||||||||||||||    
T  55961881 cctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggccccacaagtgggcggtgggatt 55961798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 3392811 - 3392759
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcataca 270  Q
    ||||||||||||||||| ||||||||| |||||||||||||  |||||||||||    
T  3392811 aggtctcaggttcgatttcctctggtgttaatttcggtggg-aaaattcataca 3392759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 22630332 - 22630292
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  22630332 aggtctcaggttcgattccctctggtgccaattttggtggg 22630292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 38740901 - 38740940
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  38740901 aggtctcaggttcgattccctctggtgtcaatttcggtgg 38740940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 13550244 - 13550318
Alignment:
Q  202 agtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    |||||||||||| ||||||||||||    ||||||||| |||| |||||||||||| ||| | ||||| ||||||    
T  13550244 agtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcggtgggctaagtccataccgagctt 13550318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 38869827 - 38869860
Alignment:
Q  217 aggtctcaggttcgattccctctggtgctaattt 250  Q
    |||||||||||||||||||||||||||| |||||    
T  38869827 aggtctcaggttcgattccctctggtgccaattt 38869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 41621763 - 41621684
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt 276  Q
    ||||| ||||||||||||   |||||||| ||| |||| |||||||||| ||||| ||||||  |||| ||||||||||||    
T  41621763 tcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtggg-caaatccatacagagctt 41621684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 40355 - 40478
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  |||||||||||  ||     
T  40355 tcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggg 40454  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||||||||||||||||||||||    
T  40455 cccccgcaagtgggcggtgggatt 40478  T

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Target: scaffold0576 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 5255 - 5126
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||||||||||    
T  5255 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaa 5156  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||| ||||||||||||||    
T  5155 acggggcccccgcaaatgggcggtgggatt 5126  T

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Target: scaffold0026 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 97539 - 97410
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||  ||| ||||||    
T  97539 ttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaa 97440  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  97439 acgggacccccgcaagtgggcggtgggatt 97410  T

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Target: scaffold0459 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 10866 - 10738
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||||| || |||||||||||| ||| | |||||||||||||  ||||||||||    
T  10866 ttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaa 10767  T
Q  288 atggccccccgcaagtgggcggtgggatt 316  Q
    ||||  |||| ||||||| ||||||||||    
T  10766 atggggccccacaagtggacggtgggatt 10738  T

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Target: scaffold0217 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 7482 - 7353
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagctt--gctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| ||| | ||||||||||||   ||||||||||    
T  7482 ttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctctggctttaa 7383  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || ||||||||||||||||||||||||    
T  7382 acggggcccccgcaagtgggcggtgggatt 7353  T

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Target: scaffold0051 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 53044 - 52915
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||  ||||||||||    
T  53044 ttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggctttaa 52945  T
Q  288 a-tggccccccgcaagtgggcggtgggatt 316  Q
    |  || |||||||| ||||||||| |||||    
T  52944 acggggcccccgcaggtgggcggtaggatt 52915  T

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Target: scaffold0102 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 39131 - 39245
Alignment:
Q  205 ttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggccccccgcaa 301  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||  | |||||||| ||||  |||||||||||  || |||||||||    
T  39131 ttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaa 39230  T
Q  302 gtgggcggtgggatt 316  Q
    |||||||||||||||    
T  39231 gtgggcggtgggatt 39245  T

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Target: scaffold0068 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 41822 - 41688
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggc 282  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| || | ||||||| || | ||| | |||||||||||||  |||||    
T  41822 ttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcttgttccaatttcgttgtgctaagtccatacagagcttgctctggc 41723  T
Q  283 tttaaa-tggccccccgcaagtgggcggtgggatt 316  Q
    ||||||  || |||| ||||||||||  |||||||    
T  41722 tttaaacggggcccctgcaagtgggcaatgggatt 41688  T

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Target: scaffold0460 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 8346 - 8286
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgg 256  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  8346 tcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 8286  T

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Target: scaffold0157 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 20246 - 20369
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaa 287  Q
    ||||| ||||| ||||||||||| || |||||||||||| ||||||||||||||| ||||||  |||| ||| | |||||| ||||||  ||||||||||    
T  20246 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaa 20345  T
Q  288 a-tggccccccgcaagtgggcggt 310  Q
    |  || ||||||||||||||||||    
T  20346 acgggacccccgcaagtgggcggt 20369  T

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Target: scaffold0016 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 32342 - 32441
Alignment:
Q  220 tctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaatg-gccccccgcaagtgggcggtgggatt 316  Q
    |||||||||||||| ||||||| || |||||||||||| ||| | |||||||||||||  ||||||||||||| | |||||||||||||| |||||||||    
T  32342 tctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggatt 32441  T

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Target: scaffold0199 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 8580 - 8513
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  8580 ttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaatttcggtggg 8513  T

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Target: scaffold0717 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 125 - 2
Alignment:
Q  196 tcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtgggttaaattcatacagagcttg--ctggctttaaa-tggc 292  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||  ||  ||||||| |||| ||| | ||||||||| |||  || ||||||||  ||     
T  125 tcttggagtttgctcgtccagaggtctcaggttcgattccctcttatgtcaatttcgatgggctaagtccatacagagtttgctctagctttaaacgggg 26  T
Q  293 cccccgcaagtgggcggtgggatt 316  Q
    ||||| || |||||||||||||||    
T  25 cccccacatgtgggcggtgggatt 2  T

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Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 66786 - 66853
Alignment:
Q  190 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtggg 257  Q
    ||||| ||||| |||||||||||||| |||||||| |||||||||| |||||||| ||||| ||||||    
T  66786 ttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaattttggtggg 66853  T

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Target: scaffold0240 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 12932 - 12884
Alignment:
Q  185 ttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgatt 233  Q
    |||| ||||| ||||| |||| |||||||||||| ||||||||||||||    
T  12932 ttgacttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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