View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2324_high_68 (Length: 276)
Name: NF2324_high_68
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2324_high_68 |
 | |
|
| [»] chr6 (30 HSPs) |
| |
|
| [»] chr8 (3 HSPs) |
| |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 248; Significance: 1e-138; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 4575046 - 4574771
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4575046 |
tgaacttgagagtgatgttatgaatgctttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaat |
4574947 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574946 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggattgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
4574847 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| |
|
|
| T |
4574846 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaacccttttt |
4574771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 4561242 - 4560968
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4561242 |
tgaacttgagagtgatgttatgaatgctttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaat |
4561143 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4561142 |
cacttgacatctttagactgtaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttg |
4561043 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
||||||||||||||| ||||| |||||||| | |||||||||||||||| |||||| |||||| ||||| ||||| |
|
|
| T |
4561042 |
gcagcatcactgttaagtctcaagagaagc-cttagagtttgcttggggtttggccaacagcaagaaaccattttt |
4560968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 4266560 - 4266834
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
4266560 |
tgaacttgagagtgatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaat |
4266659 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||||| |||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4266660 |
cacttggcatctttaaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
4266759 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
| |||||||| |||||||| |||||||||||| |||||||||||||||| |||||| |||||| | |||||||||| |
|
|
| T |
4266760 |
gtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggccaacagca-agaacccttttt |
4266834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 4481431 - 4481183
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| | || |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || |
|
|
| T |
4481431 |
tgaacttgagagtgatgttatgaattctctctattctatattcccttctctatacaccattggtccattggcttcttttttaaatcaaagtccacaatat |
4481332 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4481331 |
cacttggaaacattagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttg |
4481232 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggg |
249 |
Q |
| |
|
|||||||||| ||||||||| |||||| ||| |||||||||||||||| |
|
|
| T |
4481231 |
gcagcatcacaattatgtctcaagagaaactcttagagtttgcttgggg |
4481183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 4489749 - 4490024
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
||||||||||||||||| ||| |||||| | |||| | || |||||| ||||||||||||| ||||| |||||||| || |||||| |||| ||||| |
|
|
| T |
4489749 |
tgaacttgagagtgatgctatcaatgctcttagttctatattcccttctgtatacacaattggcccattttcttcttttttagatcaaattccagaaaat |
4489848 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4489849 |
cacttgaaatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttg |
4489948 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| |||||| ||||||||||| |
|
|
| T |
4489949 |
gcagcatcactgttatgtctcgagagaagctattagagtttgcatggggtttggccaacagcaagaaacccttttt |
4490024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 44 - 256
Target Start/End: Original strand, 4503834 - 4504046
Alignment:
| Q |
44 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
143 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4503834 |
ccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
4503933 |
T |
|
| Q |
144 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
243 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||| || | |||||||||| |
|
|
| T |
4503934 |
aatgtcttgattggcttgaattaaaagaaccaggatctgttgtttatgtaaattttggcagcattacagttatgtcttaagataaattgttagagtttgc |
4504033 |
T |
|
| Q |
244 |
ttgggggttggcc |
256 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
4504034 |
ttggggtttggcc |
4504046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 4458333 - 4458058
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||| || |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
4458333 |
tgaacttgagagtgatgttatgaatactctctactctatgttcccttctatatacaccattggcccatttgcttcttttataaatcaaagtccacaaaat |
4458234 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||||| |||||||| | || ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
4458233 |
cacttggcatctttaaattccaatctttggaaagaatatactaaatgtcttgagtggcttgaatcaaaagaaccaaagtctgttatttatgtaaattttg |
4458134 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
| |||||||| |||||||||| |||||||||| |||| |||||||||| |||||| |||||| ||| ||||||| |
|
|
| T |
4458133 |
gaagcatcacagttatgtctcaagagaagctcttagaatttgcttgggttttggccaacagcaagaaaaccttttt |
4458058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 3172479 - 3172204
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||| || | |||| | || ||||||||||||||||||||||| || ||||| ||| ||| ||||||||| |||||| |
|
|
| T |
3172479 |
tgaacttgagagtgatgttatgaatactcttagttctatattcccttctctatacacaattggtccgttcgcttcgtttttaagtcaaagtccgcaaaat |
3172380 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
3172379 |
cacttggcatctttagattctaatctttggaaagaagatactaaatgtcttgaatggcttgaaacaaaagaatcaaaatctgttgtttatgtaaattttg |
3172280 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
||||||||| |||||||||| |||||| | |||||||||||||||| || ||| |||||| ||||||||||| |
|
|
| T |
3172279 |
gcagcatcatagttatgtctcaagagaaattattagagtttgcttggggtttagccaacagcaagaaacccttttt |
3172204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 256
Target Start/End: Original strand, 4514519 - 4514770
Alignment:
| Q |
5 |
cttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgact |
104 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| || | |||||||||||||| ||||| ||||| ||||| ||| | |||||||||||||||||| ||| |
|
|
| T |
4514519 |
cttgagagtgatgttatgaatgctctttattctatgctcccttctctatacaccattggcccatttgcttcgtttttgaatcaaagtccacaaaatcact |
4514618 |
T |
|
| Q |
105 |
tgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcag |
204 |
Q |
| |
|
|| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||| || |
|
|
| T |
4514619 |
tggaatctttaggttccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaatcaggatctgttgtttatgttaattttggtag |
4514718 |
T |
|
| Q |
205 |
catcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcc |
256 |
Q |
| |
|
|||||| ||||||||| ||||| | |||||||||||||||| |||||| |
|
|
| T |
4514719 |
catcacgattatgtctccggagaaattgttagagtttgcttggggtttggcc |
4514770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 4461861 - 4461586
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||| || |||||| ||||||||| |||||| | | || |||||||||||||| ||||||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
4461861 |
tgaactcgaaagtgatattatgaatgaactctattttatattcccttctctatacaccattggtccactttcttcttttataaatcaaagtccacaaaat |
4461762 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
|| || |||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
4461761 |
cacctggcatctttaaattccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtctatgtaaattttg |
4461662 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
|||||||||| |||||| ||| || | || |||||||||||||||| ||||| | |||| ||||||||||| |
|
|
| T |
4461661 |
gcagcatcacagttatgactcctgatcaactgttagagtttgcttggggtttggctgatagcaagaaacccttttt |
4461586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 4470541 - 4470287
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||| | || |||||||||||| | ||||||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
4470541 |
tgaacttgaaagtgatgttatgaatgaactctattctatattcccttctctatacgccattggtccactttcttcttttttaaatcaaagtccacaaaat |
4470442 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
| | |||||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| | |
|
|
| T |
4470441 |
catctagcatctttaaatttcaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaggatctgttgtctatgtaaatttcg |
4470342 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggc |
255 |
Q |
| |
|
||||| |||| |||||||||| |||||| || |||||||||||||||| ||||| |
|
|
| T |
4470341 |
gcagcgtcacagttatgtctccagagaaactgttagagtttgcttggggtttggc |
4470287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 4506595 - 4506320
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
||||||||||||| ||||| |||||||| | || | ||||||||||||||||||| ||||| || ||| |||| ||| |||||||||||||||||||| |
|
|
| T |
4506595 |
tgaacttgagagtaatgttctgaatgctcttgatattatgtttccttctctatacactattggccctttaacttcatttgtaaatcaaagtccacaaaat |
4506496 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
| || || ||||||| || |||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
4506495 |
cagtttgcaactttagattcaaatctttggaaagaggatactaaatgtctcgaatggctggaatcaaaagaaccggcttctgttgtttatgtgaattttg |
4506396 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
| |||||||| ||||||||| ||||| | |||||||||||||||| |||||| | |||| ||||||||||| |
|
|
| T |
4506395 |
gaagcatcacaattatgtctccggagaaatttttagagtttgcttggggtttggccaatagcaagaaacccttttt |
4506320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 4299215 - 4299470
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||||||| |||| |||||| |||| || ||||| || ||| |||| || ||||||||| |||||| ||| |
|
|
| T |
4299215 |
tgaacttgagagtgatgtaatgaatgctctctattctatgttcccttctttatatactattggacctttaccttcattattaaatcaaactccacataat |
4299314 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||| || || || |||| ||||||||||| ||||||| |
|
|
| T |
4299315 |
cacttggaatctttaggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatccaaggagccgggatcggttgtttatgtgaattttg |
4299414 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcc |
256 |
Q |
| |
|
||||| | || |||||| ||| |||| | || ||||| |||||||||| |||||| |
|
|
| T |
4299415 |
gcagcgttacagttatgactccagagcaactgttagagattgcttggggtttggcc |
4299470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 4259548 - 4259823
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||| |||| |||||| |||| | ||||| || ||| |||| || ||||||||| |||||| ||| |
|
|
| T |
4259548 |
tgaacttgagagtgatgtaatgaatgtgctctattctatgttcccttctttatatgctattggacctttaccttcattattaaatcaaactccacataat |
4259647 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
|| || |||| |||| || |||||||||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||| || ||||||| |
|
|
| T |
4259648 |
cacctggcatcgttaggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatttaaggaacctgagtctgttgtttacgtgaattttg |
4259747 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
||||||| || |||||| ||| ||| | | |||||||||||||||| |||||| | |||| ||||||||||| |
|
|
| T |
4259748 |
gcagcattacagttatgactccagatcaatttttagagtttgcttggggattggccaatagcaagaaacccttttt |
4259823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 276
Target Start/End: Complemental strand, 4516977 - 4516784
Alignment:
| Q |
83 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctg |
182 |
Q |
| |
|
||||||||||| |||||| ||||| | ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | |||| |
|
|
| T |
4516977 |
aatcaaagtccgcaaaataacttggcttctataggttctaatctttggaaagaagatatgaaatgtcttgaatggcttgaatctaaggaacaaggttctg |
4516878 |
T |
|
| Q |
183 |
ttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
| |||||||| |||||||| |||||||| || ||| ||| ||| | || ||||||| |||||||| |||||| |||||| ||||| ||||| |
|
|
| T |
4516877 |
tagtttatgtgaattttggaagcatcacggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaacctttttt |
4516784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 276
Target Start/End: Complemental strand, 4598851 - 4598634
Alignment:
| Q |
59 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
158 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||| |||||| | ||| ||||||||| | |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4598851 |
attggccctttatcttcgtttttaaatcaaagtcaacaaaagcatttggcatctttaggtaccaatctttggaaagaagataccaagtgtcttgactggc |
4598752 |
T |
|
| Q |
159 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggccca |
258 |
Q |
| |
|
||||||| || |||||||| |||||||||||||| |||||||| ||||| || || ||| || ||| ||| | |||| ||||||||||| |||||| | |
|
|
| T |
4598751 |
ttgaatccaatgaaccaaggtctgttgtttatgtgaattttgggagcataacggtgatgactgcagaaaagttgttagactttgcttggggtttggccaa |
4598652 |
T |
|
| Q |
259 |
cagcacaaaacccttttt |
276 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
4598651 |
tagcaagaaacccttttt |
4598634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 4626689 - 4626414
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||||||| ||||||| |||||||| |||||||| ||| | |||| |||| || ||||| || || |||| || | |||| |||||||||||| |
|
|
| T |
4626689 |
tgaacttgagggtgatgtaatgaatgcgctctattctacgttcctttctgtatataccattggacctttgcattctcttttgaatcgaagtccacaaaac |
4626590 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
| |||| |||||||| || ||||||||||||||||| || || ||||||||||||||||||| || ||||||| |||||||||||||| || |||| |
|
|
| T |
4626589 |
cagttgatatctttaggttccaatctttggaaagaagacaccaattgtcttgaatggcttgaattcaaggaaccaaagtctgttgtttatgtgaactttg |
4626490 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
||||| | | |||||| ||| | |||| || |||||||||||||||| ||||| | |||| ||||||||||| |
|
|
| T |
4626489 |
gcagcgttatagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaacccttttt |
4626414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 256
Target Start/End: Original strand, 4256098 - 4256273
Alignment:
| Q |
81 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
180 |
Q |
| |
|
||||||||| |||||| | | ||||| |||| |||| || |||||||||||||||||||| || |||||||||||||||||||| || ||||| || |
|
|
| T |
4256098 |
taaatcaaactccacatagtcacttggcatcgttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtc |
4256197 |
T |
|
| Q |
181 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcc |
256 |
Q |
| |
|
||||||||| || |||||||||||||| || |||||| ||| ||| | || |||||||||||||||| |||||| |
|
|
| T |
4256198 |
tgttgtttacgtgaattttggcagcattacagttatgactccagatcaactgttagagtttgcttggggattggcc |
4256273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 256
Target Start/End: Complemental strand, 4586294 - 4586119
Alignment:
| Q |
81 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
180 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||| || |||||||| |||||||||||||| ||||| || || |
|
|
| T |
4586294 |
taaatcaaagtccacaaaaccacttagcatctttaagtacaaatctttggaaagaggataccaagtgtcttgattggcttgaatcaaaggaaccgaggtc |
4586195 |
T |
|
| Q |
181 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcc |
256 |
Q |
| |
|
||||||||||| |||||||| |||| || |||||| || ||| || || |||||||||||||||| |||||| |
|
|
| T |
4586194 |
cgttgtttatgtgaattttgggagcacaacagttatgactacagaaaaactattagagtttgcttggggtttggcc |
4586119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4564452 - 4564233
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaa-- |
98 |
Q |
| |
|
||||||| |||||||||| || |||||| ||| ||| ||||||||||||| ||| | ||||| || ||| |||| || |||| |||| |||||||| |
|
|
| T |
4564452 |
tgaactttagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaatt |
4564353 |
T |
|
| Q |
99 |
-atgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatt |
197 |
Q |
| |
|
|| | ||| ||||||| || || |||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||||||||| |||| |
|
|
| T |
4564352 |
catcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaatt |
4564253 |
T |
|
| Q |
198 |
ttggcagcatcactgttatg |
217 |
Q |
| |
|
|||| ||||| || |||||| |
|
|
| T |
4564252 |
ttggaagcattacagttatg |
4564233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 255
Target Start/End: Original strand, 4613170 - 4613366
Alignment:
| Q |
59 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
158 |
Q |
| |
|
|||||||| ||| |||| || ||| |||||||||||||||| ||||| || |||| | |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4613170 |
attggtcctttatcttcacttttaagtcaaagtccacaaaatcacttggcaagtttaagtaccaatctttggaaagaagataccaagtgtcttgattggc |
4613269 |
T |
|
| Q |
159 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggc |
255 |
Q |
| |
|
||||||| || ||||| | || ||||||||||| |||||||| ||||| || |||||| || ||| || || |||||||||||||||| ||||| |
|
|
| T |
4613270 |
ttgaatccaaggaaccgaagtccgttgtttatgtgaattttgggagcatgaccgttatgactgcagaaaaactattagagtttgcttggggtttggc |
4613366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 4580112 - 4579970
Alignment:
| Q |
59 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
158 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||||| |||| | |||||||||||| | | ||| |||||||||||||||| || |||||| | |||| |
|
|
| T |
4580112 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
4580013 |
T |
|
| Q |
159 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttgg |
201 |
Q |
| |
|
||||||| || ||||| || |||||||||||||| |||||||| |
|
|
| T |
4580012 |
ttgaatccaaggaacctaggtctgttgtttatgtgaattttgg |
4579970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 276
Target Start/End: Complemental strand, 4622798 - 4622605
Alignment:
| Q |
81 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
180 |
Q |
| |
|
||||||||| |||||| ||| ||||| ||||| ||| || ||||||||||||||||||| || |||||||| ||||||||||| || ||||| || | |
|
|
| T |
4622798 |
taaatcaaactccacataatcacttggcatctctaggttccaatctttggaaagaagatatcaagtgtcttgagtggcttgaatccaaggaacc-tga-c |
4622701 |
T |
|
| Q |
181 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
| ||||||| || |||||||||||||| || || ||| ||||||| | || |||||||||||||||| ||||| | |||| ||||||||||| |
|
|
| T |
4622700 |
tcttgtttacgtgaattttggcagcattacagtgatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaacccttttt |
4622605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 4602400 - 4602311
Alignment:
| Q |
128 |
tggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatg |
217 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||| || || || |||| ||||||||||| |||||||||||||| || |||||| |
|
|
| T |
4602400 |
tggaaagaagatactgagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggcagcattacagttatg |
4602311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 4571589 - 4571505
Alignment:
| Q |
122 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagca |
206 |
Q |
| |
|
||||||||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||||||| |||||||| |||| |
|
|
| T |
4571589 |
aatctttggaaagaagataacaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattttgggagca |
4571505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 4557742 - 4557647
Alignment:
| Q |
122 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatg |
217 |
Q |
| |
|
||||||||||||||||||| || ||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || |||||| |
|
|
| T |
4557742 |
aatctttggaaagaagataacaagtgtcttggttggcttgaatccaaggaaccgaggtccgttgtttatgtgaattttgggagcatgacagttatg |
4557647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 4617651 - 4617544
Alignment:
| Q |
110 |
tctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatca |
209 |
Q |
| |
|
|||||||| || || ||||||||||||||||| | |||||||| ||||||||||| || || || |||| ||||||||||| ||||| |||||||| | |
|
|
| T |
4617651 |
tctttagattccaacctttggaaagaagatacagagtgtcttgattggcttgaatccaaggagccgggatcagttgtttatgtgaatttcggcagcatta |
4617552 |
T |
|
| Q |
210 |
ctgttatg |
217 |
Q |
| |
|
| |||||| |
|
|
| T |
4617551 |
cagttatg |
4617544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 4592972 - 4592714
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaa-- |
98 |
Q |
| |
|
|||||||||||||||||| || |||||| ||| ||| ||||||||||||| ||| | ||||| || ||| |||| || |||| |||| |||||||| |
|
|
| T |
4592972 |
tgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaatc |
4592873 |
T |
|
| Q |
99 |
-atgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatt |
197 |
Q |
| |
|
|| | ||| ||||| | || || | ||||||||||||||| | |||||| ||||||||||||| || ||| | | || ||||||||||| |||| |
|
|
| T |
4592872 |
catcaattggattcttttggttccaacatatggaaagaagatactgagtgtcttaaatggcttgaatcgaaggaatcgggttccgttgtttatgtgaatt |
4592773 |
T |
|
| Q |
198 |
ttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcc |
256 |
Q |
| |
|
| |||||| | || |||||| | |||||| | |||||||||||||||| |||||| |
|
|
| T |
4592772 |
tcggcagccttacagttatgaatgaagagaaaatgttagagtttgcttggggtttggcc |
4592714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 4835531 - 4835571
Alignment:
| Q |
123 |
atctttggaaagaagatactaaatgtcttgaatggcttgaa |
163 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
4835531 |
atctttggaaggaagatacaaaatgtcttgaatggcttgaa |
4835571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 4568700 - 4568628
Alignment:
| Q |
83 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaat |
155 |
Q |
| |
|
||||||| ||| ||||| ||||| | ||||||| || ||||||||||||||||||| ||||||||||||| |
|
|
| T |
4568700 |
aatcaaaatccccaaaagcacttggcttctttaggttccaatctttggaaagaagatatgaaatgtcttgaat |
4568628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 24103737 - 24103482
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
24103737 |
tgaacttgagagtgatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaat |
24103638 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||||| |||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
24103637 |
cacttggcatctttaaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatcagttgtttatgtaaattttg |
24103538 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcc |
256 |
Q |
| |
|
| |||||||| |||||||| |||||||||||| |||||||||||||||| |||||| |
|
|
| T |
24103537 |
gtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggcc |
24103482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 276
Target Start/End: Original strand, 20863241 - 20863512
Alignment:
| Q |
5 |
cttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgact |
104 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| |||| |||||||||||||| ||||| || || | ||||||| |||||||||||||||| ||| ||| |
|
|
| T |
20863241 |
cttgagagtgatgttatgaatgttctctattctatgttcccttctctatacaccattggcccttttgtttcttttttaaatcaaagtccacagaatcact |
20863340 |
T |
|
| Q |
105 |
tgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcag |
204 |
Q |
| |
|
|| | |||||||| || | ||||||||||||||| ||| ||||||||| |||||||||||| |||||||| ||||| |||| ||||||||||||||||| |
|
|
| T |
20863341 |
tggcgtctttagattcaagtctttggaaagaagacactgaatgtcttgcatggcttgaatcgaaagaaccgggatctattgtatatgtaaattttggcag |
20863440 |
T |
|
| Q |
205 |
catcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcccacagcacaaaacccttttt |
276 |
Q |
| |
|
| ||| || |||||| ||| || | |||||||||| ||||| |||||| |||||| ||||||||||| |
|
|
| T |
20863441 |
taccacagtcatgtctgtagaaaaattgttagagtttgcatggggtttggccaacagcaagaaacccttttt |
20863512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 1674840 - 1674709
Alignment:
| Q |
125 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgag |
224 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| || ||||| |||| ||||||||||| ||||| || ||||| | ||||||| ||| || |
|
|
| T |
1674840 |
ctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaatttcggtagcattattgttatgactccag |
1674741 |
T |
|
| Q |
225 |
agaagctcgtagagtttgcttgggggttggcc |
256 |
Q |
| |
|
| | || | |||||||||||||| |||||| |
|
|
| T |
1674740 |
atcaactattggagtttgcttggggtttggcc |
1674709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 16685782 - 16685909
Alignment:
| Q |
122 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
221 |
Q |
| |
|
|||||||||||| ||||||| || |||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || |||||| || |
|
|
| T |
16685782 |
aatctttggaaataagataccaagtgtcttgattggcttgaatccaaggaaccgagttccgttgtttatgtgaattttgggagcatgacagttatgactg |
16685881 |
T |
|
| Q |
222 |
gagagaagctcgtagagtttgcttgggg |
249 |
Q |
| |
|
||| || || |||||||||||||||| |
|
|
| T |
16685882 |
cagaaaaactattagagtttgcttgggg |
16685909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 3087158 - 3086903
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||||||||||||||| |||||||| | |||||| |||| ||||| |||| || ||||| |||||| |||| | |||||||||| | |||| ||| |
|
|
| T |
3087158 |
tgaacttgagagtgatgtaatgaatgcgctatattctgtgttcccttcattatataccattggaccattaccttcactactaaatcaaacttcacataat |
3087059 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||||| ||||||||| || |||||||||||||||||||| || ||||||||||||||||||||||| | || |||||||||||||| | ||||| |
|
|
| T |
3087058 |
cacttggcatctttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatcaaagggacttgagtctgttgtttatgtgagttttg |
3086959 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttgggggttggcc |
256 |
Q |
| |
|
||||||| || |||||| ||| |||| | || |||||||||||||||| |||||| |
|
|
| T |
3086958 |
gcagcattacagttatgactcaagagcaactattagagtttgcttggggtttggcc |
3086903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 4083 - 4327
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||||||||| | ||| |||||||| |||||||| |||| |||||| |||| || ||||| || ||| |||| || ||||||||| |||||| ||| |
|
|
| T |
4083 |
tgaacttgagagcggtgtattgaatgctctctattctatgttcccttctttatataccattggacctttaacttcattattaaatcaaactccacataat |
4182 |
T |
|
| Q |
101 |
gacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttg |
200 |
Q |
| |
|
||| |||||||| || |||||||||||||||||||| || |||||||| ||||||| ||| || ||||| || ||||||||||| ||||||| |
|
|
| T |
4183 |
cacta---atctttaggttccaatctttggaaagaagataccaagtgtcttgagtggcttgcatccaaggaacctgagtcggttgtttatgtgaattttg |
4279 |
T |
|
| Q |
201 |
gcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggg |
248 |
Q |
| |
|
| ||||| || |||||| ||| ||| | || ||||||||||||||| |
|
|
| T |
4280 |
gaagcattacagttatgactccagatcaactgttagagtttgcttggg |
4327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3112 - 3329
Alignment:
| Q |
1 |
tgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaat |
100 |
Q |
| |
|
|||||||||||||||||| ||||||| || | ||| |||| || || |||||| || || |||||| |||| || ||| ||||| |||||| ||| |
|
|
| T |
3112 |
tgaacttgagagtgatgtactgaatgcgctccactctatgttcccatcattatacagtatcggaccattaccttcattattaagtcaaactccacataat |
3211 |
T |
|
| Q |
101 |
gacttgacatcttt-agactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
199 |
Q |
| |
|
||||| |||||| || || |||||||||||||||||||| || |||||||||||||| ||||| || ||||| |||||||||||||| ||||| |
|
|
| T |
3212 |
cacttggaatcttttaggttccaatctttggaaagaagataccaagtgtcttgaatggctcgaatccaaggaacctgagtctgttgtttatgtgaatttc |
3311 |
T |
|
| Q |
200 |
ggcagcatcactgttatg |
217 |
Q |
| |
|
|||||||| || |||||| |
|
|
| T |
3312 |
ggcagcattacagttatg |
3329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 1281743 - 1281627
Alignment:
| Q |
110 |
tctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatca |
209 |
Q |
| |
|
|||||||| || || |||||||||||||||| | |||||| ||||||||||||| || ||||| ||||||||||||||||| ||||| || ||||| | |
|
|
| T |
1281743 |
tctttagattccaacctttggaaagaagatatcgagtgtcttcaatggcttgaatcgaaggaaccgagatctgttgtttatgtgaatttcggaagcatta |
1281644 |
T |
|
| Q |
210 |
ctgttatgtctcgagag |
226 |
Q |
| |
|
| |||||| ||| |||| |
|
|
| T |
1281643 |
cagttatgactccagag |
1281627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 77 - 4
Alignment:
| Q |
125 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattt |
198 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| || ||||| |||| ||||||||||| ||||| |
|
|
| T |
77 |
ctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaattt |
4 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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