View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2324_low_102 (Length: 236)
Name: NF2324_low_102
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2324_low_102 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 236
Target Start/End: Complemental strand, 43185043 - 43184822
Alignment:
| Q |
16 |
atttaaccatatatttatttaaaaagtcactaaatttatgttaggaggcacgacaataattgcttggtcacaactctaaataaa-tactcatagccatgt |
114 |
Q |
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| T |
43185043 |
atttaaccatatatttatttaaaaagtcactaaatttatgttaggaggcacgacaataattgcttggtcacaactctaaataaaatactcatagccatgt |
43184944 |
T |
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| Q |
115 |
atcaaaaaatcagcaaagttttctattcaatgatcaacttaactagaaactcagctttaatttgaaagtaggcttcaactggatggataactccaaatat |
214 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
43184943 |
atcaaaaaatcggcaaagttttctattcaatgatcaacttaactagaaactcagctttaatttgaaagtaagcttcaactggatggataactccaaatat |
43184844 |
T |
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| Q |
215 |
tccaatcctcttccaatgattc |
236 |
Q |
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||||| |||||||||||||||| |
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| T |
43184843 |
tccaaccctcttccaatgattc |
43184822 |
T |
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