View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2324_low_107 (Length: 230)
Name: NF2324_low_107
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2324_low_107 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 8509865 - 8509984
Alignment:
| Q |
18 |
attaaaattggatagaagtagaactatagaagaacactagcaactatcaaatttgtaaaataactatgaaatataccccacaccctattccaccctgcaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8509865 |
attaaaattggatagaagtagaactatagaagaacactagcaactatcaaatttgtaaaataactatgaaatataccccacaccctattccaccctgcaa |
8509964 |
T |
|
| Q |
118 |
aatccctttgcatatcatga |
137 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
8509965 |
aatccctttgcatatcatga |
8509984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University