View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2324_low_38 (Length: 414)
Name: NF2324_low_38
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2324_low_38 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 414
Target Start/End: Original strand, 37503503 - 37503920
Alignment:
| Q |
1 |
aatttactcaaacttttatatgtaaactatttgtccatatttctgt-----tgaatattatatatgcacaaagcaaccatatggaaagtctttaactgaa |
95 |
Q |
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|||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| |
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| T |
37503503 |
aatttactcaaacttttatatgtaaactgtgttgccatatttctgcgctgctgaatattatatatgcacaaagcaagcatatggaaagtcttaaactgaa |
37503602 |
T |
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| Q |
96 |
agatggactagtaatttgtaaatagaagacatgcnnnnnnngtagagcaatacccattccttaataatcctttaatcagcaccattgattgatctttaaa |
195 |
Q |
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||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |
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| T |
37503603 |
agatggactagta-tttgtaaatagaagacatgcaaaaaaagtagaacaatacccattccttaataatccttgaatcagcaccattcattgatctttaaa |
37503701 |
T |
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| Q |
196 |
cttgacagatcatgaaatgtatattattgaagtagaagatgattccatggaaaatttcctcttcacaggttgtatttcttcttccatttattttgttaac |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
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| T |
37503702 |
cttgacagatcatgaaatgtatattattgaagtagaagatgattccatggaaaatttcctcttcacaggttgtatttcctcttccatttattttgctaac |
37503801 |
T |
|
| Q |
296 |
aaattaagcaatgttatttttatttggtctttcactagatgatacaccagaatcaccatcatcattatctactctaataataatatcaaactctcctaca |
395 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37503802 |
aaattaagcaatattatttttatttggtctttcactagatgatacaccagaatcaccatcatcattatctactctaataataatatcaaactctcctaca |
37503901 |
T |
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| Q |
396 |
ttatgtgaccctaatcctc |
414 |
Q |
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||||||||||||||||||| |
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| T |
37503902 |
ttatgtgaccctaatcctc |
37503920 |
T |
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