View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2324_low_58 (Length: 354)
Name: NF2324_low_58
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2324_low_58 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 40515080 - 40514744
Alignment:
| Q |
16 |
atgaagctgtgattatgatataaaaattggaaatcgttaaacacggtgttagagttagagtgggcaaagtaagctttctttcattatcttcttggacagt |
115 |
Q |
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| T |
40515080 |
atgaagctgtgattatgatataaaaattggaaatcgttaaacacggt--tagagttagagtgggcaaagtaagctttctttcattatcttcttggacagt |
40514983 |
T |
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| Q |
116 |
gtttccagactctgacaatgatgcttgtgcacattactaacttctgacttttagatagtgagaggtaaaaataattaaagaaaaatgtgaaagaagtaag |
215 |
Q |
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| T |
40514982 |
gtttccaaactctgacaatgatgcttgtgcacattactaacttctgacttttagatagtgagaggtaaaaataattaaagaaaaatgtgaaagaagtaag |
40514883 |
T |
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| Q |
216 |
gaattatacgagggagaaacaacgtaggaataagacgtaaagtgatttggacatcctaccatgcgcacaacacacaaatgtttgtataaacttttggcat |
315 |
Q |
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| T |
40514882 |
gaattatacgagggagaaacaacgtaggaataagacgtaaagtgatttggacatcctaccatgcgcacaacacacaaatgtttgtataaacttttggcat |
40514783 |
T |
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| Q |
316 |
agggtggtatcatcatgaaagacctaagacagctttggt |
354 |
Q |
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| T |
40514782 |
agggtggtatcatcacgaaagacctaagacagctttggt |
40514744 |
T |
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