View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2324_low_96 (Length: 243)
Name: NF2324_low_96
Description: NF2324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2324_low_96 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 2236768 - 2236954
Alignment:
| Q |
16 |
atgaagagggtaaaaaatggagatattaacttctaggttttctgccatatatattttgaaaagaaaaggaagattataaaggggaattccatttcagata |
115 |
Q |
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| T |
2236768 |
atgaagagggtaaaaaatggagatattaacttctaggttttctgccatatatattttgaaaagaaaaggaagattataaaggggaattccatttcagata |
2236867 |
T |
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| Q |
116 |
ataaatgtactatatcatataatatcaaatattggtttcttacttactcatacaattgataagacatatccactaaacaatgtaata |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2236868 |
ataaatgtactatatcatataatatcaaatattggtttcttacttactcatacaattgataagacatatccactaaacaatgtaata |
2236954 |
T |
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