View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2325_high_15 (Length: 318)
Name: NF2325_high_15
Description: NF2325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2325_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 3 - 313
Target Start/End: Original strand, 53793886 - 53794195
Alignment:
| Q |
3 |
aattaattaatgattatatctcattctctagtttcgttttcggcattaaacttgtttggatgattctactaacnnnnnnncttgtttgtattaaatgcaa |
102 |
Q |
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| T |
53793886 |
aattaattaatgattatatctcattctctagtttcgttttcggcattaaacttgtttggatgattctactaacaaaaaaacttgtttgtattaaatgcaa |
53793985 |
T |
|
| Q |
103 |
tgtttttctaggcggctttgggttaatagtaatggatcattaaaataattttttcttatgagttttttctgatttctatgttattgtttatggtgtattc |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
53793986 |
tgtttttctaggcggctttgggttaatagtaatggatcattaaaataattttttcttatgagtttt-tctgatttctatgttattgtttatggtgtattc |
53794084 |
T |
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| Q |
203 |
agggtgctttgtcttccgcagattttgttcttctcctgtatttagcatcatcttataatatcttgtgctccgccatgcagtttattttaataaaagtttc |
302 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
53794085 |
agggtgctttgtcttccgcagattttgttcttgtcctgtatttagcatcatcttataatatctggtgctccgccatgcagtttattttaataaaagtttc |
53794184 |
T |
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| Q |
303 |
cctttgcttct |
313 |
Q |
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|||||||||| |
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| T |
53794185 |
tctttgcttct |
53794195 |
T |
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