View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2325_high_20 (Length: 277)
Name: NF2325_high_20
Description: NF2325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2325_high_20 |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 6 - 260
Target Start/End: Complemental strand, 37924939 - 37924681
Alignment:
| Q |
6 |
aagaaaatcatgaaggtcactcaatatatcaacttctgatgctaatctcgcttgataaacatgtgcttttccagcagtgcctaaaatataaaggttagaa |
105 |
Q |
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| T |
37924939 |
aagaaaatcatgaaggtcactcaatatatcaacttctgatgctaatctcgcttgataaacatgtgcttttccagcagtgcctaaaatataaaggttagaa |
37924840 |
T |
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| Q |
106 |
atattatatatgaattccaataatgaaccagagtgcaaaatatatcaaagtgcaaaacattgttaagctgataatgttgatacgaaagtgcaaaatattg |
205 |
Q |
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| T |
37924839 |
atattatatatgaattccaataatgaaccagagtgcaaaatatatcaaagtgcaaaacattgttaagctgataatgttgatacgaaagtgcaaaatattg |
37924740 |
T |
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| Q |
206 |
atatt----gtttttaaacttctacagacggtaggttatagatgatataaactatcaca |
260 |
Q |
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| T |
37924739 |
atattgtacgtttttaaacttctacagatggtaggttatagatgatataaactatcaca |
37924681 |
T |
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