View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2325_low_21 (Length: 284)

Name: NF2325_low_21
Description: NF2325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2325_low_21
NF2325_low_21
[»] chr6 (46 HSPs)
chr6 (17-270)||(20134718-20134971)
chr6 (17-270)||(22197898-22198151)
chr6 (18-262)||(20424715-20424959)
chr6 (34-262)||(924473-924703)
chr6 (34-262)||(8765594-8765824)
chr6 (23-227)||(25179741-25179945)
chr6 (28-262)||(4112343-4112574)
chr6 (23-271)||(12963488-12963733)
chr6 (34-262)||(28196838-28197065)
chr6 (34-262)||(12047856-12048084)
chr6 (34-247)||(17086392-17086603)
chr6 (28-270)||(20156419-20156666)
chr6 (28-270)||(22176166-22176413)
chr6 (34-270)||(30720392-30720628)
chr6 (34-223)||(24376970-24377162)
chr6 (40-223)||(20179297-20179488)
chr6 (40-223)||(22156503-22156694)
chr6 (34-271)||(17028793-17029031)
chr6 (34-253)||(19900205-19900426)
chr6 (34-262)||(3043740-3043970)
chr6 (34-223)||(12621655-12621850)
chr6 (34-262)||(22923454-22923683)
chr6 (34-262)||(22939166-22939395)
chr6 (34-262)||(23861611-23861840)
chr6 (34-223)||(34470987-34471181)
chr6 (18-94)||(8723620-8723695)
chr6 (34-219)||(26984815-26985004)
chr6 (34-219)||(27035878-27036067)
chr6 (34-119)||(15401672-15401756)
chr6 (34-119)||(15413459-15413543)
chr6 (34-119)||(15429053-15429137)
chr6 (18-77)||(15741110-15741168)
chr6 (34-109)||(16565898-16565972)
chr6 (153-223)||(18814753-18814824)
chr6 (34-117)||(27292537-27292619)
chr6 (147-262)||(24295031-24295147)
chr6 (147-262)||(24309049-24309165)
chr6 (152-262)||(13288420-13288528)
chr6 (152-262)||(13303387-13303495)
chr6 (152-253)||(15401798-15401898)
chr6 (152-253)||(15413585-15413685)
chr6 (152-253)||(15429178-15429278)
chr6 (23-66)||(25807557-25807600)
chr6 (23-93)||(16767250-16767320)
chr6 (23-93)||(15745898-15745968)
chr6 (136-204)||(35090532-35090600)
[»] chr3 (52 HSPs)
chr3 (18-262)||(10929516-10929761)
chr3 (18-262)||(15475578-15475822)
chr3 (23-262)||(16630869-16631110)
chr3 (25-262)||(15371692-15371929)
chr3 (23-262)||(16614546-16614787)
chr3 (23-262)||(22052073-22052314)
chr3 (18-262)||(29942783-29943028)
chr3 (18-262)||(29991937-29992182)
chr3 (34-227)||(4654286-4654480)
chr3 (23-262)||(36131067-36131300)
chr3 (18-227)||(18526042-18526250)
chr3 (23-227)||(14141412-14141617)
chr3 (34-262)||(23011499-23011726)
chr3 (23-270)||(17787958-17788206)
chr3 (34-227)||(19627512-19627707)
chr3 (23-270)||(19089479-19089727)
chr3 (34-262)||(28165727-28165954)
chr3 (34-227)||(15363745-15363943)
chr3 (34-202)||(12338278-12338446)
chr3 (34-270)||(19705068-19705305)
chr3 (34-223)||(11646685-11646878)
chr3 (34-223)||(15881937-15882130)
chr3 (34-223)||(15897116-15897309)
chr3 (34-223)||(5647464-5647657)
chr3 (34-223)||(5662885-5663078)
chr3 (34-223)||(18046918-18047111)
chr3 (34-262)||(4883122-4883352)
chr3 (34-262)||(22641207-22641437)
chr3 (34-223)||(18062981-18063174)
chr3 (34-223)||(4694737-4694931)
chr3 (34-262)||(8278748-8278980)
chr3 (34-262)||(8307558-8307790)
chr3 (34-253)||(8226436-8226657)
chr3 (34-253)||(10600884-10601105)
chr3 (34-223)||(4684653-4684847)
chr3 (34-223)||(18003265-18003459)
chr3 (34-253)||(1999887-2000107)
chr3 (34-119)||(15730380-15730464)
chr3 (34-119)||(15745465-15745549)
chr3 (152-223)||(35876416-35876487)
chr3 (152-223)||(35891486-35891557)
chr3 (153-223)||(11260878-11260951)
chr3 (152-223)||(8291618-8291691)
chr3 (23-93)||(10423334-10423404)
chr3 (23-93)||(15104646-15104716)
chr3 (152-223)||(15745588-15745660)
chr3 (23-93)||(4450001-4450071)
chr3 (23-93)||(4786099-4786169)
chr3 (23-93)||(4800938-4801008)
chr3 (152-202)||(15730503-15730553)
chr3 (136-204)||(41007709-41007777)
chr3 (136-204)||(41016488-41016556)
[»] scaffold0211 (1 HSPs)
scaffold0211 (18-262)||(10709-10953)
[»] chr4 (43 HSPs)
chr4 (18-262)||(18464832-18465076)
chr4 (23-262)||(20757469-20757708)
chr4 (23-262)||(20763860-20764099)
chr4 (34-247)||(16281334-16281548)
chr4 (18-270)||(15299105-15299357)
chr4 (34-271)||(17241862-17242099)
chr4 (34-270)||(26138433-26138667)
chr4 (23-270)||(15399604-15399851)
chr4 (18-270)||(15268763-15269015)
chr4 (23-270)||(15375856-15376102)
chr4 (23-270)||(15395680-15395926)
chr4 (19-270)||(46660371-46660621)
chr4 (34-227)||(12785810-12786002)
chr4 (34-227)||(17095232-17095426)
chr4 (34-270)||(17087214-17087451)
chr4 (34-262)||(15387437-15387664)
chr4 (34-262)||(1895948-1896175)
chr4 (34-230)||(14239672-14239866)
chr4 (23-227)||(15238480-15238694)
chr4 (23-227)||(15219724-15219939)
chr4 (34-270)||(16244663-16244906)
chr4 (34-262)||(22727178-22727408)
chr4 (34-227)||(19639216-19639413)
chr4 (34-202)||(26406586-26406756)
chr4 (34-117)||(1663292-1663375)
chr4 (34-262)||(5199591-5199820)
chr4 (34-223)||(9247434-9247627)
chr4 (34-223)||(14675780-14675974)
chr4 (34-262)||(14657308-14657545)
chr4 (34-223)||(17023670-17023863)
chr4 (34-223)||(17009705-17009898)
chr4 (135-262)||(1663134-1663262)
chr4 (34-223)||(14658394-14658588)
chr4 (34-262)||(13441296-13441525)
chr4 (34-262)||(18044165-18044397)
chr4 (34-211)||(26461048-26461224)
chr4 (34-223)||(30278548-30278742)
chr4 (18-76)||(24658111-24658168)
chr4 (34-92)||(15643519-15643577)
chr4 (34-92)||(34848874-34848932)
chr4 (23-93)||(4865973-4866042)
chr4 (23-93)||(6556944-6557013)
chr4 (23-93)||(40463755-40463824)
[»] chr5 (45 HSPs)
chr5 (23-262)||(21501404-21501643)
chr5 (23-262)||(37294441-37294680)
chr5 (34-262)||(19863511-19863740)
chr5 (26-227)||(22899196-22899398)
chr5 (23-227)||(24611908-24612115)
chr5 (23-227)||(24671534-24671741)
chr5 (23-227)||(24708310-24708517)
chr5 (23-227)||(24741304-24741511)
chr5 (23-227)||(24754073-24754280)
chr5 (35-227)||(30465397-30465589)
chr5 (34-262)||(20579790-20580014)
chr5 (34-271)||(28898046-28898279)
chr5 (34-271)||(28934441-28934674)
chr5 (34-262)||(22268522-22268751)
chr5 (34-262)||(23887878-23888107)
chr5 (34-229)||(34494119-34494316)
chr5 (34-270)||(25195757-25195994)
chr5 (34-270)||(27285334-27285571)
chr5 (34-262)||(23902521-23902750)
chr5 (34-262)||(24947772-24948002)
chr5 (34-262)||(24980637-24980867)
chr5 (18-253)||(18061235-18061472)
chr5 (34-247)||(25211142-25211351)
chr5 (34-247)||(25275294-25275503)
chr5 (34-262)||(7816308-7816542)
chr5 (34-253)||(22347804-22348026)
chr5 (34-223)||(22445905-22446098)
chr5 (34-223)||(24692431-24692624)
chr5 (34-223)||(32449133-32449328)
chr5 (136-246)||(11560114-11560224)
chr5 (34-110)||(25503830-25503905)
chr5 (136-246)||(11546056-11546167)
chr5 (18-76)||(26868350-26868407)
chr5 (152-262)||(30930297-30930410)
chr5 (152-253)||(20193438-20193539)
chr5 (23-93)||(29881566-29881636)
chr5 (152-262)||(30957179-30957291)
chr5 (153-223)||(3944144-3944216)
chr5 (23-93)||(11546211-11546281)
chr5 (23-93)||(11560268-11560338)
chr5 (23-93)||(41301951-41302021)
chr5 (136-204)||(24955687-24955755)
chr5 (136-204)||(24964147-24964215)
chr5 (136-204)||(28845089-28845157)
chr5 (136-204)||(28853699-28853767)
[»] chr2 (30 HSPs)
chr2 (23-262)||(22700236-22700475)
chr2 (23-270)||(19445940-19446187)
chr2 (23-270)||(19460749-19460996)
chr2 (23-270)||(27399711-27399958)
chr2 (34-262)||(21692749-21692976)
chr2 (34-262)||(21707531-21707758)
chr2 (23-270)||(19556201-19556448)
chr2 (23-270)||(27388650-27388897)
chr2 (23-229)||(10115196-10115402)
chr2 (34-262)||(17260369-17260598)
chr2 (23-198)||(18085984-18086161)
chr2 (23-116)||(29530323-29530415)
chr2 (34-227)||(20831784-20831981)
chr2 (34-253)||(34306002-34306224)
chr2 (34-223)||(39757673-39757865)
chr2 (34-253)||(34263203-34263425)
chr2 (34-262)||(28269103-28269334)
chr2 (34-262)||(12651193-12651423)
chr2 (34-262)||(12666114-12666344)
chr2 (34-92)||(20833743-20833801)
chr2 (34-106)||(28878019-28878090)
chr2 (34-106)||(28893231-28893302)
chr2 (152-223)||(28877891-28877963)
chr2 (152-223)||(28893101-28893173)
chr2 (23-93)||(23121836-23121906)
chr2 (136-204)||(15943384-15943452)
chr2 (136-204)||(35148110-35148178)
chr2 (136-204)||(41232709-41232777)
chr2 (136-204)||(42564771-42564839)
chr2 (136-204)||(42573395-42573463)
[»] chr1 (29 HSPs)
chr1 (18-262)||(16230852-16231097)
chr1 (23-270)||(15815996-15816244)
chr1 (23-262)||(20456756-20456995)
chr1 (23-270)||(15434370-15434617)
chr1 (34-271)||(20361922-20362163)
chr1 (34-271)||(20548748-20548989)
chr1 (34-227)||(31447267-31447461)
chr1 (34-223)||(20343001-20343193)
chr1 (34-262)||(16197327-16197556)
chr1 (34-262)||(16212336-16212565)
chr1 (34-223)||(20329457-20329649)
chr1 (23-169)||(20489853-20490000)
chr1 (34-271)||(16662884-16663117)
chr1 (34-219)||(16405974-16406162)
chr1 (34-262)||(21730651-21730884)
chr1 (34-262)||(21731682-21731915)
chr1 (34-253)||(4147067-4147288)
chr1 (41-262)||(5137942-5138167)
chr1 (34-262)||(26798289-26798519)
chr1 (34-223)||(21886633-21886826)
chr1 (34-262)||(18293770-18294000)
chr1 (34-262)||(21481744-21481974)
chr1 (34-191)||(13480655-13480813)
chr1 (152-262)||(21505970-21506079)
chr1 (152-223)||(18289410-18289483)
chr1 (23-93)||(20321017-20321087)
chr1 (23-93)||(22080522-22080592)
chr1 (136-204)||(31541101-31541169)
chr1 (136-204)||(31549670-31549738)
[»] chr7 (43 HSPs)
chr7 (18-270)||(15004371-15004624)
chr7 (23-270)||(10852021-10852268)
chr7 (23-270)||(13894931-13895178)
chr7 (34-227)||(30241355-30241549)
chr7 (34-271)||(7369447-7369683)
chr7 (34-227)||(16439272-16439467)
chr7 (34-227)||(16454210-16454405)
chr7 (23-262)||(16051704-16051941)
chr7 (34-229)||(34194732-34194929)
chr7 (23-271)||(34195780-34196025)
chr7 (23-262)||(10839028-10839265)
chr7 (23-262)||(16036977-16037214)
chr7 (23-271)||(23765313-23765564)
chr7 (34-117)||(23231139-23231222)
chr7 (34-262)||(15353014-15353244)
chr7 (34-262)||(16498265-16498495)
chr7 (34-262)||(16507572-16507802)
chr7 (34-262)||(16522676-16522906)
chr7 (34-262)||(18627206-18627437)
chr7 (34-262)||(2969105-2969336)
chr7 (34-223)||(11361507-11361699)
chr7 (34-262)||(2150230-2150460)
chr7 (34-262)||(2165441-2165671)
chr7 (34-262)||(48217365-48217599)
chr7 (34-226)||(4186559-4186760)
chr7 (23-223)||(5246487-5246691)
chr7 (34-223)||(20592945-20593139)
chr7 (34-262)||(13735812-13736044)
chr7 (34-247)||(4055524-4055742)
chr7 (152-262)||(10921241-10921350)
chr7 (153-262)||(11414163-11414271)
chr7 (152-262)||(36878924-36879035)
chr7 (153-262)||(11429146-11429254)
chr7 (160-262)||(15854320-15854420)
chr7 (23-93)||(4948739-4948809)
chr7 (23-93)||(6179264-6179334)
chr7 (23-93)||(6222777-6222847)
chr7 (23-93)||(11414027-11414097)
chr7 (23-93)||(11429010-11429080)
chr7 (23-93)||(30308781-30308851)
chr7 (23-93)||(36878794-36878864)
chr7 (136-204)||(13832653-13832721)
chr7 (136-204)||(13840683-13840751)
[»] chr8 (24 HSPs)
chr8 (18-262)||(15018250-15018495)
chr8 (23-253)||(28503495-28503723)
chr8 (18-270)||(11342198-11342450)
chr8 (23-270)||(21965698-21965945)
chr8 (23-270)||(22070456-22070703)
chr8 (34-223)||(16254005-16254199)
chr8 (34-253)||(5516082-5516303)
chr8 (34-262)||(21336908-21337139)
chr8 (34-262)||(21376869-21377100)
chr8 (34-223)||(33271886-33272076)
chr8 (34-223)||(33242542-33242732)
chr8 (147-262)||(2126552-2126668)
chr8 (147-262)||(2141709-2141825)
chr8 (152-262)||(15324653-15324764)
chr8 (152-262)||(15505022-15505133)
chr8 (153-262)||(28263169-28263277)
chr8 (160-246)||(14025036-14025121)
chr8 (23-93)||(14359125-14359195)
chr8 (23-93)||(15210790-15210860)
chr8 (23-93)||(18801469-18801539)
chr8 (23-93)||(28263343-28263413)
chr8 (136-204)||(30939430-30939498)
chr8 (136-204)||(39836405-39836473)
chr8 (136-204)||(39844447-39844515)
[»] scaffold0389 (1 HSPs)
scaffold0389 (43-262)||(15002-15223)
[»] scaffold0174 (2 HSPs)
scaffold0174 (23-270)||(8550-8797)
scaffold0174 (23-95)||(2604-2675)
[»] scaffold0393 (1 HSPs)
scaffold0393 (23-262)||(7282-7516)
[»] scaffold0055 (1 HSPs)
scaffold0055 (23-227)||(7082-7287)
[»] scaffold0052 (1 HSPs)
scaffold0052 (23-227)||(77248-77453)
[»] scaffold0109 (2 HSPs)
scaffold0109 (23-270)||(17230-17478)
scaffold0109 (23-270)||(31474-31722)
[»] scaffold0021 (2 HSPs)
scaffold0021 (26-262)||(99379-99623)
scaffold0021 (26-262)||(180302-180546)
[»] scaffold0143 (1 HSPs)
scaffold0143 (18-262)||(22940-23182)
[»] scaffold0260 (1 HSPs)
scaffold0260 (34-223)||(5324-5516)
[»] scaffold0954 (1 HSPs)
scaffold0954 (34-262)||(2982-3209)
[»] scaffold0031 (1 HSPs)
scaffold0031 (23-262)||(126212-126450)
[»] scaffold0231 (1 HSPs)
scaffold0231 (34-262)||(26028-26251)
[»] scaffold0093 (1 HSPs)
scaffold0093 (34-151)||(8478-8596)
[»] scaffold0253 (1 HSPs)
scaffold0253 (23-117)||(3244-3337)
[»] scaffold0092 (1 HSPs)
scaffold0092 (60-253)||(17636-17830)
[»] scaffold0413 (1 HSPs)
scaffold0413 (23-119)||(7289-7384)
[»] scaffold0206 (1 HSPs)
scaffold0206 (34-270)||(12730-12967)
[»] scaffold0186 (1 HSPs)
scaffold0186 (34-223)||(13089-13281)
[»] scaffold0089 (3 HSPs)
scaffold0089 (34-223)||(11142-11335)
scaffold0089 (34-262)||(25451-25684)
scaffold0089 (34-223)||(51360-51555)
[»] scaffold0322 (1 HSPs)
scaffold0322 (34-271)||(17681-17919)
[»] scaffold0240 (1 HSPs)
scaffold0240 (34-223)||(20189-20383)
[»] scaffold0001 (1 HSPs)
scaffold0001 (34-262)||(72460-72691)
[»] scaffold2097 (1 HSPs)
scaffold2097 (34-223)||(112-307)
[»] scaffold0184 (2 HSPs)
scaffold0184 (72-262)||(22836-23028)
scaffold0184 (34-76)||(26629-26671)
[»] scaffold0078 (2 HSPs)
scaffold0078 (72-262)||(49816-50008)
scaffold0078 (34-76)||(46173-46215)
[»] scaffold0170 (1 HSPs)
scaffold0170 (34-119)||(3682-3766)
[»] scaffold0074 (1 HSPs)
scaffold0074 (23-84)||(11839-11899)
[»] scaffold0643 (1 HSPs)
scaffold0643 (34-107)||(1754-1826)
[»] scaffold0601 (1 HSPs)
scaffold0601 (34-107)||(6803-6875)
[»] scaffold0134 (1 HSPs)
scaffold0134 (147-227)||(23613-23695)
[»] scaffold0099 (1 HSPs)
scaffold0099 (34-110)||(52724-52802)


Alignment Details
Target: chr6 (Bit Score: 250; Significance: 1e-139; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 17 - 270
Target Start/End: Complemental strand, 20134971 - 20134718
Alignment:
Q  17 ggtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20134971 ggtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa 20134872  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttgg 216  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20134871 aataattagtgtgtttcaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttgg 20134772  T
Q  217 ttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20134771 ttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 20134718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 22197898 - 22198151
Alignment:
Q  17 ggtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22197898 ggtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa 22197997  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttgg 216  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22197998 aataattagtgtgtttcaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttgg 22198097  T
Q  217 ttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22198098 ttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 22198151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 20424959 - 20424715
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  20424959 gtgtatgagatttcatttt-attgaacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaag 20424861  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||    
T  20424860 tatttttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttg 20424762  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | |||||||||||||||| |||||| |||||||    
T  20424761 gttcaattattaacgaaaaaatgtctaagtagaaattaagattcatt 20424715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 924703 - 924473
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  || |||||||     
T  924703 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaagtatttttggtgtgttt 924604  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttcaattattaaagg 231  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||| |     
T  924603 caattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttcaattattaacga 924505  T
Q  232 aaaaa-tgtctaagtaggaattaaaattcatt 262  Q
    ||||| ||||||||||| |||||| |||||||    
T  924504 aaaaagtgtctaagtagaaattaagattcatt 924473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 8765824 - 8765594
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa--aataattagtgtgtt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  | |  || |||||||    
T  8765824 ttttattggacttggagaggttttgacctcttgcctacatacccctttaagggatcaaaattccatgtagttctcttccaaaagtattttttggtgtgtt 8765725  T
Q  132 ccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttcaattattaaag 230  Q
     |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||| ||||||||||||||||||| |    
T  8765724 tcaattgatttta-gtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgagttgttggttcaattattaacg 8765626  T
Q  231 gaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |||||||||||||||  |||||| |||||||    
T  8765625 aaaaaatgtctaagtaaaaattaagattcatt 8765594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 25179945 - 25179741
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    |    
T  25179945 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgttt 25179847  T
Q  123 tagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaa 221  Q
    | ||||||| |||||||||||||||||| ||||| |||||||||| | | ||||||||||||||||||| ||||||| |||| |||||| ||||||||||    
T  25179846 ttgtgtgtttcaattgattttaagttttggaaaacggttttgaagcagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaa 25179747  T
Q  222 ttatta 227  Q
    ||||||    
T  25179746 ttatta 25179741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 28 - 262
Target Start/End: Original strand, 4112343 - 4112574
Alignment:
Q  28 ttttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataattagt 126  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  ||  ||  |    
T  4112343 ttttatttttattggacttgaagaggttttgacctcttgcctacataccctttttagggatcaaaattccatgtagttctcttccaaaagtatttttgat 4112442  T
Q  127 gtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattatt 226  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||| | |||||||||||||||||||  |||| ||||| |||| | |||||||||||||||    
T  4112443 gtgtttcaattaatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcat--gagaggaaatggtgagtagttggttcaattatt 4112539  T
Q  227 aaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||| |||||  |||||||| ||||||||| ||||||    
T  4112540 aaa-gaaaagagtctaagttggaattaaagttcatt 4112574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 23 - 271
Target Start/End: Original strand, 12963488 - 12963733
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||    |    
T  12963488 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaatattt 12963586  T
Q  123 tagtgtgttccaattgattttaagtttt-tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttca 220  Q
    | ||||||| ||||||||||||||||||   ||||||||||| |||||   ||||||||||||||||||| ||||||| |||| |||||| |||||||||    
T  12963587 ttgtgtgtttcaattgattttaagttttgaaaaaatggttttaaagaagggaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttca 12963686  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    |||||||    ||||| |||||||| ||||||| | ||||||  |||||||    
T  12963687 attatta----aaaaaagtctaagttggaattagagttcatttgagttttt 12963733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 28196838 - 28197065
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||  || |||||||     
T  28196838 ttttattggacttggagaggttttgacctctagcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaagtatttttggtgtgtt- 28196936  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaagg 231  Q
      ||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||      
T  28196937 tgattga-tttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattattaaa-a 28197034  T
Q  232 aaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||| ||||| || ||||||| | ||||||    
T  28197035 aaaaaggtctacgttggaattagagttcatt 28197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 12047856 - 12048084
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||  ||||||    || ||||||| |    
T  12047856 ttttattggacttggagaggttttgacctctggcctacatacccttttaagtgatcaaaattccatgtagttctctctcaaaaatatttttgtgtgtttc 12047955  T
Q  134 aattgattttaag--tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaag 230  Q
    |||||||||||||  ||||||||||| |||||||||||||  ||||| |||||||||| ||  ||||| |||| |||| | ||||||||||||||||||     
T  12047956 aattgattttaagtttttttgaaaatgggttttgaagaaaggaaagaagccgtaaaggaat--gagaaaaaatggtgagtggttggttcaattattaaa- 12048052  T
Q  231 gaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||  |||||||| ||||||||| ||||||    
T  12048053 gaaaagagtctaagttggaattaaagttcatt 12048084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 34 - 247
Target Start/End: Original strand, 17086392 - 17086603
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  |  || |||||||      
T  17086392 ttttattggacttggagaggttttgacctcttgccta-atacccttttaagggatcaaaattccatgtagttctcttccaaaatgt-ttttgtgtgtt-t 17086488  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaagga 232  Q
      ||||||||| |||||  ||||||||||| ||||| | ||||||||||||||||||| ||| ||| |||| |||||| |||||||||||||||||| |     
T  17086489 ggttgattttaggttttgaaaaatggttttaaagaagagaaagaggccgtaaaggcatgagaaaagaaaatggtgaatggttggttcaattattaaaagg 17086588  T
Q  233 aaaatgtctaagtag 247  Q
    |||||||||| ||||    
T  17086589 aaaatgtctaggtag 17086603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 270
Target Start/End: Complemental strand, 20156666 - 20156419
Alignment:
Q  28 ttttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttc-tcttccaaaaa---ataatt 123  Q
    |||||||||||| ||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||    |  ||    
T  20156666 ttttatttttat-ggatttggagaagttttgacttcttgcctacatacccttttaagggatcaaaattccatgtagttcatcttcaaaaaatgttttttt 20156568  T
Q  124 agtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata----gtgaattgttggttc 219  Q
    |||||||| |||||||| |||| |||||| |||||||||||||| ||  || |||||| |||||||||||||||| ||| |    ||||||||||| |||    
T  20156567 agtgtgtttcaattgatcttaactttttggaaatggttttgaagcaaggaaggaggccttaaaggcataagagaaaaaaaagaaggtgaattgttgattc 20156468  T
Q  220 aattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||| ||||||| |||||||||||||| | ||||  |||||||||| ||||    
T  20156467 aatt-ttaaagg-aaaatgtctaagtaagcattaggattcattgaaatttt 20156419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 270
Target Start/End: Original strand, 22176166 - 22176413
Alignment:
Q  28 ttttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttc-tcttccaaaaa---ataatt 123  Q
    |||||||||||| ||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||    |  ||    
T  22176166 ttttatttttat-ggatttggagaagttttgacttcttgcctacatacccttttaagggatcaaaattccatgtagttcatcttcaaaaaatgttttttt 22176264  T
Q  124 agtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata----gtgaattgttggttc 219  Q
    |||||||| |||||||| |||| |||||| |||||||||||||| ||  || |||||| |||||||||||||||| ||| |    ||||||||||| |||    
T  22176265 agtgtgtttcaattgatcttaactttttggaaatggttttgaagcaaggaaggaggccttaaaggcataagagaaaaaaaagaaggtgaattgttgattc 22176364  T
Q  220 aattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||| ||||||| |||||||||||||| | ||||  |||||||||| ||||    
T  22176365 aatt-ttaaagg-aaaatgtctaagtaagcattaggattcattgaaatttt 22176413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 34 - 270
Target Start/End: Original strand, 30720392 - 30720628
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||    || |||||||      
T  30720392 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaatgtttttgtgtgtt-t 30720489  T
Q  134 aattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaa 229  Q
     ||||||||| |||||||    |||||||||||||||||| | ||||| ||||||||||||| ||| || || |||||||  |||||||| ||| |||||    
T  30720490 gattgatttt-agtttttgttggaaaatggttttgaagaagagaaagaagccgtaaaggcatgagaaaaaaagtagtgaagagttggttcgatttttaaa 30720588  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
     | ||||||||||||||| | ||||| |||||||| |||||    
T  30720589 ag-aaaatgtctaagtagaagttaaagttcattgaggtttt 30720628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 24377162 - 24376970
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||||   |  || | ||||    
T  24377162 ttttattggacttggagaggttttgacctcttgccttcatacccttttaagggatcaaaatgccatgtagttctctttcaaaaaaatgttttttgcgtgt 24377063  T
Q  131 tccaattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaatt 223  Q
    | | ||||||||||  |||||  |||||||||||||||||| | ||||| ||||||||||||| ||| || || |||||||  ||||||||||||    
T  24377062 t-cgattgattttagtttttttggaaaatggttttgaagaagagaaagaagccgtaaaggcatgaga-aaaaagtagtgaagagttggttcaatt 24376970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 40 - 223
Target Start/End: Complemental strand, 20179488 - 20179297
Alignment:
Q  40 tggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttc-tcttccaaaaa----ataattagtgtgttcca 134  Q
    |||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||     |  |||||||||| ||    
T  20179488 tggatttggagaagttttgacttcttgcctacatacccttttaagggatcaaaattccatgtagttcatcttcaaaaaatgttttttttagtgtgtttca 20179389  T
Q  135 attgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata---gtgaattgttggttcaatt 223  Q
    |||||| |||| |||||| |||||||||||||| ||  || |||||| |||||||||||||||| ||| |   |||||||||||||||||||    
T  20179388 attgatcttaactttttggaaatggttttgaagcaaggaaggaggccttaaaggcataagagaaaaaaaaaaggtgaattgttggttcaatt 20179297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 40 - 223
Target Start/End: Original strand, 22156503 - 22156694
Alignment:
Q  40 tggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttc-tcttccaaaaa----ataattagtgtgttcca 134  Q
    |||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||     |  |||||||||| ||    
T  22156503 tggatttggagaagttttgacttcttgcctacatacccttttaagggatcaaaattccatgtagttcatcttcaaaaaatgttttttttagtgtgtttca 22156602  T
Q  135 attgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata---gtgaattgttggttcaatt 223  Q
    |||||| |||| |||||| |||||||||||||| ||  || |||||| |||||||||||||||| ||| |   |||||||||||||||||||    
T  22156603 attgatcttaactttttggaaatggttttgaagcaaggaaggaggccttaaaggcataagagaaaaaaaaaaggtgaattgttggttcaatt 22156694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 271
Target Start/End: Original strand, 17028793 - 17029031
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaaataattagtg-tgtt 131  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| || ||||  |  || ||| |||     
T  17028793 ttttattggacttggaaaggttttgacctcttgcctacatacccttttaagggatc-aaactccatgtagttctctctcaaaaatgtttttggtgatgtg 17028891  T
Q  132 ccaattgattttaagtttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaa-ttattaaa 229  Q
      | ||||||||||| |||||||||| |||||||||||||  ||||| |||||||||||||   |||| |||| |||| | |||||||||| ||||||||    
T  17028892 tgatttgattttaag-ttttgaaaatgggttttgaagaaaggaaagaagccgtaaaggcatggaagaaaaaatggtgagtggttggttcaatttattaaa 17028990  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
     |||||  |||||||| ||| |||| |||||||  |||||||    
T  17028991 -gaaaagagtctaagttggatttaacattcatttgagttttt 17029031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 253
Target Start/End: Original strand, 19900205 - 19900426
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  19900205 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgctttttgtgtgtt 19900303  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    ||||||||||||||||||||  |||||||| ||||||||||||||||| |||| |||||| |||||| ||||| ||     
T  19900304 tggttgatttt-agtttttgttggaaaatggttttgaagaaaaggaagaggccttaaaggcataagagaagaaaatggtgaatggttggtccaattgtt- 19900401  T
Q  228 aaggaaaaatgtctaagtaggaatta 253  Q
     |  ||||| ||||||||||||||||    
T  19900402 -attaaaaaagtctaagtaggaatta 19900426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 3043970 - 3043740
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||| |  ||  ||||| |     
T  3043970 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaatttttttttgtgtgtt 3043872  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||     
T  3043871 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt- 3043774  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  3043773 -attaaaaaagtctaagtaggaattaggattcatt 3043740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 12621850 - 12621655
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  12621850 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttttgtgtgt 12621752  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
    |    |||||||||  |||||    |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||| |||||| ||||||||||||    
T  12621751 t-tggttgattttagttttttgttggaaaatggttttgaagaaaagaaagaggccttaagggcataagagaagaaaatggtgaatggttggttcaatt 12621655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 22923454 - 22923683
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaaataattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||| || ||||  |  || |||||||     
T  22923454 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaatgttttttgtgtgtt- 22923551  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||| ||| ||     
T  22923552 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttccattgtt- 22923649  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  22923650 -attaaaaaagtctaagtaggaattaggattcatt 22923683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 22939166 - 22939395
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaaataattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||| || ||||  |  || |||||||     
T  22939166 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaatgttttttgtgtgtt- 22939263  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||| ||| ||     
T  22939264 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttccattgtt- 22939361  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  22939362 -attaaaaaagtctaagtaggaattaggattcatt 22939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 23861611 - 23861840
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaaataattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||| || ||||  |  || |||||||     
T  23861611 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaatgttttttgtgtgtt- 23861708  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||| ||| ||     
T  23861709 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttccattgtt- 23861806  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  23861807 -attaaaaaagtctaagtaggaattaggattcatt 23861840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 34470987 - 34471181
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||| ||||| ||| |||||||||||||||| |||||||   |  || ||||||    
T  34470987 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaatggatc-aaactccatgtagttctctttcaaaaaatgtttttttgtgtgt 34471085  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    |    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  34471086 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 34471181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 8723695 - 8723620
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaat 94  Q
    |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8723695 gtgtttgagattttatttt-agtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaat 8723620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 26985004 - 26984815
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  26985004 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 26984906  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttc 219  Q
       |||||||| |||||||    ||||| |||||||||||| |  |||||||| ||||||||||||||| | |||| |||||| ||||||||    
T  26984905 tggttgatttt-agtttttgttggaaaaaggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatggtgaatggttggttc 26984815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 27036067 - 27035878
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  27036067 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 27035969  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttc 219  Q
       |||||||| |||||||    ||||| |||||||||||| |  |||||||| ||||||||||||||| | |||| |||||| ||||||||    
T  27035968 tggttgatttt-agtttttgttggaaaaaggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatggtgaatggttggttc 27035878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 15401672 - 15401756
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat 119  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||    
T  15401672 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaat 15401756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 15413459 - 15413543
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat 119  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||    
T  15413459 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaat 15413543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 15429053 - 15429137
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat 119  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||    
T  15429053 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaat 15429137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 15741110 - 15741168
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccc 77  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  15741110 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacataccc 15741168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 16565972 - 16565898
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct 109  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||    
T  16565972 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctct 16565898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 18814753 - 18814824
Alignment:
Q  153 aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  18814753 aaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 18814824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 27292537 - 27292619
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||    
T  27292537 ttttagtggacttgaagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaa 27292619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 24295031 - 24295147
Alignment:
Q  147 tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagt 245  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| |||    ||||| ||||||||    
T  24295031 ttttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatagttggttcaattgttattaaaaaaaggtctaagt 24295130  T
Q  246 aggaattaaaattcatt 262  Q
    || |||||  |||||||    
T  24295131 agaaattaggattcatt 24295147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 24309049 - 24309165
Alignment:
Q  147 tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagt 245  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| |||    ||||| ||||||||    
T  24309049 ttttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatagttggttcaattgttattaaaaaaaggtctaagt 24309148  T
Q  246 aggaattaaaattcatt 262  Q
    || |||||  |||||||    
T  24309149 agaaattaggattcatt 24309165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 13288420 - 13288528
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| ||||| |  ||  ||||| |||||||||||||    
T  13288420 gaaaatggttttggagaaaagaaagaggccttaaaggcataagagaaggaaatggtgaa-tgttggtccaattttataa--aaaaaagtctaagtaggaa 13288516  T
Q  251 ttaaaattcatt 262  Q
    |||  |||||||    
T  13288517 ttaggattcatt 13288528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 13303387 - 13303495
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||| ||||| |  ||  ||||| |||||||||||||    
T  13303387 gaaaatggttttggagaaaagaaagaggccttaaaggcataagagaaggaaatggtgaa-tgttggtccaattttataa--aaaaaagtctaagtaggaa 13303483  T
Q  251 ttaaaattcatt 262  Q
    |||  |||||||    
T  13303484 ttaggattcatt 13303495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 15401798 - 15401898
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| | ||||  ||||| |||||||||||| ||  |  ||||| |||||||||||||    
T  15401798 gaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatgttgaatggttggttcaattgtt--attaaaaaagtctaagtaggaa 15401895  T
Q  251 tta 253  Q
    |||    
T  15401896 tta 15401898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 15413585 - 15413685
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| | ||||  ||||| |||||||||||| ||  |  ||||| |||||||||||||    
T  15413585 gaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatgttgaatggttggttcaattgtt--attaaaaaagtctaagtaggaa 15413682  T
Q  251 tta 253  Q
    |||    
T  15413683 tta 15413685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 15429178 - 15429278
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| | ||||  ||||| |||||||||||| ||  |  ||||| |||||||||||||    
T  15429178 gaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatgttgaatggttggttcaattgtt--attaaaaaagtctaagtaggaa 15429275  T
Q  251 tta 253  Q
    |||    
T  15429276 tta 15429278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 25807557 - 25807600
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttg 66  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  25807557 tgagatttttattttattggacttggagaggttttgacctcttg 25807600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 16767250 - 16767320
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  16767250 tgagattttatttttatttggcttggaggagttttgactcgttgcctacgtacccttttaagggatcaaaa 16767320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 15745968 - 15745898
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  15745968 tgagatcttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 15745898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 35090532 - 35090600
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  35090532 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 35090600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 10929516 - 10929761
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  10929516 gtgtatgagatttcatttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaag 10929615  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||    
T  10929616 tatttttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttg 10929714  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | |||||||||||||||| |||||| |||||||    
T  10929715 gttcaattattaacgaaaaaatgtctaagtagaaattaagattcatt 10929761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 15475578 - 15475822
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  15475578 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaag 15475676  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||    
T  15475677 tatttttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaatatagtgaattgttg 15475775  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | |||||||| ||||||| |||||| |||||||    
T  15475776 gttcaattattaacgaaaaaatgtttaagtagaaattaagattcatt 15475822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 23 - 262
Target Start/End: Original strand, 16630869 - 16631110
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaata-- 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||      
T  16630869 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaaagtatt 16630967  T
Q  121 -attagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggtt 218  Q
      || ||||||| ||| ||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||| |||||| || |||||||||||||||||    
T  16630968 tttttgtgtgtttcaactgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaatggcatgagagaaaaagatagtgaattgttggtt 16631066  T
Q  219 caattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||||| | |||||||||||||||| |||||| |||||||    
T  16631067 caattattaacgaaaaaatgtctaagtagaaattaagattcatt 16631110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 15371929 - 15371692
Alignment:
Q  25 agattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataatt 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  ||    
T  15371929 agattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaagtattttt 15371831  T
Q  124 agtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggttcaat 222  Q
     ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||| || |||||||||||||| ||||||    
T  15371830 ggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaagatagtgaattgttgattcaat 15371732  T
Q  223 tattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||   |||||||||||||||| |||||| |||||||    
T  15371731 tattaacaaaaaaatgtctaagtagaaattaagattcatt 15371692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 262
Target Start/End: Original strand, 16614546 - 16614787
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaata-- 120  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||      
T  16614546 tgagattttatttt-attggacttggagaggttttgacctctttcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaaagtatt 16614644  T
Q  121 -attagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggtt 218  Q
      || ||||||| ||| ||||||| ||||||||||||||||||||||||| | |||||| |||||| ||||| |||||| || |||||||||||||||||    
T  16614645 ttttggtgtgtttcaactgatttt-agtttttgaaaatggttttgaagaagagaaagagaccgtaatggcatgagagaaaaagatagtgaattgttggtt 16614743  T
Q  219 caattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||||| | |||||||||||||||| |||||| |||||||    
T  16614744 caattattaacgaaaaaatgtctaagtagaaattaagattcatt 16614787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 22052314 - 22052073
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaata-- 120  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||      
T  22052314 tgagattttatttt-attggacttggagaggttttgacctctttcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaaagtatt 22052216  T
Q  121 -attagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggtt 218  Q
      || ||||||| ||| ||||||| ||||||||||||||||||||||||| | |||||| |||||| ||||| |||||| || |||||||||||||||||    
T  22052215 ttttggtgtgtttcaactgatttt-agtttttgaaaatggttttgaagaagagaaagagaccgtaatggcatgagagaaaaagatagtgaattgttggtt 22052117  T
Q  219 caattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||||| | |||||||||||||||| |||||| |||||||    
T  22052116 caattattaacgaaaaaatgtctaagtagaaattaagattcatt 22052073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 29943028 - 29942783
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||     
T  29943028 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaag 29942930  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || ||||||| ||||||||||| ||||||||||||||||||||||||| | || |||||||||||||||| ||| ||| | ||||||||||||||    
T  29942929 tatttttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaggaggccgtaaaggcatgagaggaaaagatagtgaattgttg 29942831  T
Q  216 gttcaattattaaaggaaaaa-tgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | ||||| |||||||||||  ||||| |||||||    
T  29942830 gttcaattattaacgaaaaaagtgtctaagtagagattaagattcatt 29942783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 29992182 - 29991937
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||     
T  29992182 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaag 29992084  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || ||||||| ||||||||||| ||||||||||||||||||||||||| | || |||||||||||||||| ||| ||| | ||||||||||||||    
T  29992083 tatttttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaggaggccgtaaaggcatgagaggaaaagatagtgaattgttg 29991985  T
Q  216 gttcaattattaaaggaaaaa-tgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | ||||| |||||||||||  ||||| |||||||    
T  29991984 gttcaattattaacgaaaaaagtgtctaagtagagattaagattcatt 29991937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 34 - 227
Target Start/End: Complemental strand, 4654480 - 4654286
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   || |||||||     
T  4654480 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtttttgtgtgttt 4654381  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattatta 227  Q
    ||||||||||||||| || |||||||||||||||||| | ||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||    
T  4654380 caattgattttaagtgttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaaatggtgaatagttggttcaattatta 4654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 23 - 262
Target Start/End: Original strand, 36131067 - 36131300
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  ||      
T  36131067 tgagattttatttt-attggacttggagaggttttgacctcttgcctacataccctttttagggatcaaaattccatgtagttctcttccaaaagtattt 36131165  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  36131166 ttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttca 36131264  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||      ||||||||||||||| |||||| |||||||    
T  36131265 attatt------aaaatgtctaagtagaaattaagattcatt 36131300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 18526250 - 18526042
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  18526250 gtgtttgaaattttatttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaa 18526151  T
Q  118 ataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggt 217  Q
        || |||||||   |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||| |||| |||||| ||||||    
T  18526150 tgtttttgtgtgtt-tgattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaaatggtgaatagttggt 18526052  T
Q  218 tcaattatta 227  Q
    ||||||||||    
T  18526051 tcaattatta 18526042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 14141412 - 14141617
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aa 121  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||       
T  14141412 tgagattttatttt-attggacttggagaagttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtt 14141510  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttca 220  Q
    || ||||||| |||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||||| ||||||| |||| |||||| | |||||||    
T  14141511 tttgtgtgtttcaattgattttaagttttggaaaacggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggatggttca 14141610  T
Q  221 attatta 227  Q
    |||||||    
T  14141611 attatta 14141617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 23011499 - 23011726
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    |||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||   |  || |||||||      
T  23011499 ttttattggacttggagaggatttgacctcttgcctacatactcttttaagggatcaaaattccatgtagttctctttcaaattttttttcgtgtgtt-t 23011597  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaaggaa 233  Q
     |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||| || |||| |||||| ||||||||||||||||    ||    
T  23011598 gattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaaaaaaaatggtgaatagttggttcaattattattaaaa 23011697  T
Q  234 aaatgtctaagtaggaattaaaattcatt 262  Q
    ||| |||||||| ||||||| | ||||||    
T  23011698 aaaggtctaagttggaattagagttcatt 23011726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 17788206 - 17787958
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--ta 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||        
T  17788206 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaaatgt 17788108  T
Q  121 attagtgtgttccaattgattttaag-tttttgaaaatgg--ttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggt 217  Q
     || ||||||  | |||||||||||| |||||| ||||||  |||||||||||  || || |||||||||||||  ||||| |||| |||| | ||||||    
T  17788107 ttttgtgtgtatcgattgattttaagttttttggaaatgggtttttgaagaaaggaatgaagccgtaaaggcat--gagaaaaaatggtgagtggttggt 17788010  T
Q  218 tcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||||| |||||  |||||||| |||||||| |||||||||||||||    
T  17788009 tcaattattaaa-gaaaagagtctaagttggaattaagattcattgaagtttt 17787958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 19627512 - 19627707
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  |  || |||||||     
T  19627512 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgttttttgtgtgtt- 19627610  T
Q  133 caattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattatta 227  Q
      || |||||||  |||||  |||||||||||||||||| | |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  19627611 tgatcgattttagtttttttggaaaatggttttgaagaagagaaagaggccgtaaaggcataagagaaaaaatggtgaatagttggttcaattatta 19627707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 19089727 - 19089479
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--ta 120  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||        
T  19089727 tgagattttatttt-attggacttggagaggttttgacctcttacctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaaatgt 19089629  T
Q  121 attagtgtgttccaattgattttaag-tttttgaaaatgg--ttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggt 217  Q
     || ||||||  | |||||||||||| |||||| ||||||  |||||||||||  || || |||||||||||||  ||||| |||| |||| | ||||||    
T  19089628 ttttgtgtgtatcgattgattttaagttttttggaaatgggtttttgaagaaaggaatgaagccgtaaaggcat--gagaaaaaatggtgagtggttggt 19089531  T
Q  218 tcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||||| |||||  |||||||| |||||||| |||||||||||||||    
T  19089530 tcaattattaaa-gaaaagagtctaagttggaattaagattcattgaagtttt 19089479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 28165727 - 28165954
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||   || |||||||     
T  28165727 ttttattgaacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatttcatgtagttctctttcaaaaaatgtttttgtgtgttt 28165826  T
Q  133 caattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaag 230  Q
    |||||||||||||||||||  ||||  |||||||||||||  ||||| ||||| |||||||  ||||| |||| |||| | |||||||||||||||||      
T  28165827 caattgattttaagttttttggaaatgggttttgaagaaaggaaagaagccgtgaaggcat--gagaaaaaatggtgagtggttggttcaattattaa-- 28165922  T
Q  231 gaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||  ||||| || ||||||||| ||||||    
T  28165923 gaaaagagtctatgttggaattaaagttcatt 28165954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 15363745 - 15363943
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataattagtgtgttc 132  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  |  || |||||||     
T  15363745 ttttattggacttggagaggatttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttggtgtgtt- 15363843  T
Q  133 caattgattttaag---tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
      ||||||||||||   ||||||||||| |||||||||||| | ||||||||||||||||||| ||||||| |||| |||| | ||||||||||||||||    
T  15363844 tgattgattttaagttttttttgaaaatgggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgagtggttggttcaattatta 15363943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 202
Target Start/End: Complemental strand, 12338446 - 12338278
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    || |||||||      
T  12338446 ttttagtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttgtgtgtt-t 12338348  T
Q  134 aattgattttaagtttttg-aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaa 202  Q
     ||||||||||  |||||| ||||||||||||||||| | ||||||||| ||||||||| ||||||||||    
T  12338347 gattgattttagttttttgaaaaatggttttgaagaagagaaagaggccttaaaggcatgagagaagaaa 12338278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 270
Target Start/End: Complemental strand, 19705305 - 19705068
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||   || |||||||     
T  19705305 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaaatgtttttgtgtgtt- 19705208  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaa 228  Q
      ||||||||| |||||||    |||||||||||||||||| | ||||| ||||||||||||| ||| || || |||||||  |||||||| ||| ||||    
T  19705207 tgattgatttt-agtttttgttggaaaatggttttgaagaagagaaagaagccgtaaaggcatgagaaaaaaagtagtgaagagttggttcgatttttaa 19705109  T
Q  229 aggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    | | ||||||| ||||||| | ||||| |||||||| |||||    
T  19705108 aag-aaaatgtttaagtagaagttaaagttcattgaggtttt 19705068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 11646685 - 11646878
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||| ||   || |||||||     
T  11646685 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaagatgtttttgtgtgttt 11646783  T
Q  133 caattgattttaagtttttg---aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
    ||||||||||||  |||| |   |||| |||||||||||| | ||||||||| ||||||||| ||||||| |||| |||| | ||||||||||||    
T  11646784 caattgattttagattttgggaaaaaaaggttttgaagaagagaaagaggccttaaaggcatgagagaagaaaatggtgagtggttggttcaatt 11646878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 15881937 - 15882130
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  15881937 ttttattggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 15882035  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  15882036 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 15882130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 15897116 - 15897309
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  15897116 ttttattggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 15897214  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  15897215 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 15897309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 5647657 - 5647464
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | ||||||||||||||  |||||||   ||  ||||| |     
T  5647657 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttctctctcaaaaaaagctttttgtgtgtt 5647559  T
Q  133 caattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
      ||||||||||| ||||    |||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  5647558 tgattgattttaatttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 5647464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 5663078 - 5662885
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | ||||||||||||||  |||||||   ||  ||||| |     
T  5663078 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttctctctcaaaaaaagctttttgtgtgtt 5662980  T
Q  133 caattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
      ||||||||||| ||||    |||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  5662979 tgattgattttaatttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 5662885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 18047111 - 18046918
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | ||||||||||||||  |||||||   ||  ||||| |     
T  18047111 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttctctctcaaaaaaagctttttgtgtgtt 18047013  T
Q  133 caattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
       |||||||||| ||||    |||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  18047012 tggttgattttaatttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 18046918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 4883352 - 4883122
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||  |  || |||||||     
T  4883352 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaatgttttttgtgtgtt- 4883255  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||||| |||||    ||||||||||||||||||   ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||     
T  4883254 tggttgattttaattttttgttggaaaatggttttgaagaagggaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt- 4883156  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  4883155 -attaaaaaagtctaagtaggaattaggattcatt 4883122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 22641207 - 22641437
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  22641207 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 22641305  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||     
T  22641306 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt- 22641403  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  22641404 -attaaaaaagtctaagtaggaattaggattcatt 22641437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 18063174 - 18062981
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | ||||||||||||||  |||||||   ||  | ||| |     
T  18063174 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttctctctcaaaaaaagctttttatgtgtt 18063076  T
Q  133 caattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
       |||||||||| ||||    |||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  18063075 tggttgattttaatttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 18062981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 4694931 - 4694737
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   || || ||||||    
T  4694931 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttattttgtgtgt 4694833  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    |    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  4694832 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 4694737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 8278748 - 8278980
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  8278748 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttttgtgtgt 8278846  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattat 225  Q
    |    |||||||||  |||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| |    
T  8278847 t-tggttgattttagttttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgt 8278945  T
Q  226 taaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |  |  ||||| ||||||||||||||||  |||||||    
T  8278946 t--attaaaaaagtctaagtaggaattaggattcatt 8278980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 8307558 - 8307790
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  8307558 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttttgtgtgt 8307656  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattat 225  Q
    |    |||||||||  |||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| |    
T  8307657 t-tggttgattttagttttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgt 8307755  T
Q  226 taaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |  |  ||||| ||||||||||||||||  |||||||    
T  8307756 t--attaaaaaagtctaagtaggaattaggattcatt 8307790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 253
Target Start/End: Original strand, 8226436 - 8226657
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  8226436 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 8226534  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| |  |||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||     
T  8226535 tggttgatttt-agtttttgttggaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt- 8226632  T
Q  228 aaggaaaaatgtctaagtaggaatta 253  Q
     |  ||||| ||||||||||||||||    
T  8226633 -attaaaaaagtctaagtaggaatta 8226657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 253
Target Start/End: Complemental strand, 10601105 - 10600884
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||| ||  ||  ||||| |     
T  10601105 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaagatgttttttgtgtgtt 10601007  T
Q  133 caattgattttaagtt---tttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaa 228  Q
       |||||||||  ||   || |||||||||||||||||| |  |||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||      
T  10601006 tggttgattttagttttcgttggaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt-- 10600909  T
Q  229 aggaaaaatgtctaagtaggaatta 253  Q
    |  ||||| ||||||||||||||||    
T  10600908 attaaaaaagtctaagtaggaatta 10600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 4684847 - 4684653
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  | |||||   |  || ||||||    
T  4684847 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcgaaaaatgtttttttgtgtgt 4684749  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    |    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  4684748 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 4684653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 18003459 - 18003265
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| || ||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  18003459 ttttagtggacttggagaggttttgacctcatgtctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttttgtgtgt 18003361  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    |    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  18003360 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 18003265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 253
Target Start/End: Complemental strand, 2000107 - 1999887
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||  |  ||||||    || |||||||      
T  2000107 ttttagtggatttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttcattctcaaaaatgtttttgtgtgtt-t 2000010  T
Q  134 aattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaa 228  Q
      |||||||||| |||||    ||||||||||||| |||||| |||| |||| ||||||||||||||| | |||| |||||| |||||||||||| ||      
T  2000009 ggttgattttaattttttgttggaaaatggttttggagaaaagaaaggggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt-- 1999912  T
Q  229 aggaaaaatgtctaagtaggaatta 253  Q
    |  ||||| ||||||||||||||||    
T  1999911 attaaaaaagtctaagtaggaatta 1999887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 15730380 - 15730464
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat 119  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||    
T  15730380 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaat 15730464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 15745465 - 15745549
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat 119  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||    
T  15745465 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaat 15745549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 35876487 - 35876416
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaatt 223  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||| | |||||||||||||    
T  35876487 gaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaaggaaatggtg-agtgttggttcaatt 35876416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 35891557 - 35891486
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaatt 223  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||| | |||||||||||||    
T  35891557 gaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaaggaaatggtg-agtgttggttcaatt 35891486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 11260878 - 11260951
Alignment:
Q  153 aaaatggttttgaagaaaataaagaggccgtaaaggcataagag---aagaaatagtgaattgttggttcaatt 223  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||   || |||| |||||| ||||||||||||    
T  11260878 aaaatggttttgaagaaaagaaagaggccttaaaggcataagagaaaaaaaaatggtgaatggttggttcaatt 11260951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 8291691 - 8291618
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataa--gagaagaaatagtgaattgttggttcaatt 223  Q
    |||||||||||||||||| |  |||||||| |||||||||||  |||||||||| |||||| ||||||||||||    
T  8291691 gaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaagaaatggtgaatggttggttcaatt 8291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 10423404 - 10423334
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  10423404 tgagattttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 10423334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 15104716 - 15104646
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  15104716 tgagattttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 15104646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 15745588 - 15745660
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
    |||||||||||||||||| |   ||||||| ||||||||||||||||| |||| ||||||  |||||||||||    
T  15745588 gaaaatggttttgaagaagagggagaggccttaaaggcataagagaagaaaatggtgaatgattggttcaatt 15745660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 4450071 - 4450001
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  4450071 tgagatcttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 4450001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 4786099 - 4786169
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  4786099 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 4786169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 4800938 - 4801008
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  4800938 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 4801008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 15730503 - 15730553
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaa 202  Q
    |||||||||||||||||| |   ||||||| ||||||||||||||||||||    
T  15730503 gaaaatggttttgaagaagagggagaggccttaaaggcataagagaagaaa 15730553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 41007777 - 41007709
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  41007777 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 41007709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 41016556 - 41016488
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  41016556 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 41016488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 10709 - 10953
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  10709 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaag 10807  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||    
T  10808 tatttttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttg 10906  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | |||||||||||||||| |||||| |||||||    
T  10907 gttcaattattaacgaaaaaatgtctaagtagaaattaagattcatt 10953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 6e-80; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 18464832 - 18465076
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  18464832 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaag 18464930  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||    
T  18464931 tatttttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttg 18465029  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | |||||||||||||||| |||||| |||||||    
T  18465030 gttcaattattaacgaaaaaatgtctaagtagaaattaagattcatt 18465076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 20757708 - 20757469
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataa 121  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||      
T  20757708 tgagattttatttt-attcgacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaagtattt 20757610  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||  | ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  20757609 ttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagatgagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttca 20757511  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||   |||||||||||||||| |||||| |||||||    
T  20757510 attattaacaaaaaaatgtctaagtagaaattaagattcatt 20757469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 20764099 - 20763860
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataa 121  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||      
T  20764099 tgagattttatttt-attcgacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaagtattt 20764001  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||  | ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  20764000 ttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagatgagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttca 20763902  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||   |||||||||||||||| |||||| |||||||    
T  20763901 attattaacaaaaaaatgtctaagtagaaattaagattcatt 20763860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 34 - 247
Target Start/End: Complemental strand, 16281548 - 16281334
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  ||  || |||||||     
T  16281548 ttttattggacttggagaggttttgacctcttgcctacatacccttttgagggatcaaaattccatgtagttctcttccaaaagtatttttggtgtgttt 16281449  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttcaattattaaagg 231  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | |||||||||||||||||||||||||||       
T  16281448 caattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttcaattattaacaa 16281350  T
Q  232 aaaaatgtctaagtag 247  Q
    ||||||||||||||||    
T  16281349 aaaaatgtctaagtag 16281334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 15299105 - 15299357
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||    
T  15299105 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaa 15299203  T
Q  118 ataattagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttg 215  Q
    ||  ||  ||||| |   |||||||||||| |||||||||||||||||||||| | || |||||||||||||||| ||| |||| |||||||||| ||||    
T  15299204 atggtttttgtgtgtttgattgattttaag-ttttgaaaatggttttgaagaagagaaggaggccgtaaaggcatgagacaagacaatagtgaatggttg 15299302  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||| |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  15299303 gttcgattattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 15299357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 34 - 271
Target Start/End: Complemental strand, 17242099 - 17241862
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||    || ||||||| |    
T  17242099 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatttcatgtagttctctttcaaaaatgtttttgtgtgtttc 17242000  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaa-tagtgaattgttggttcaattattaaagga 232  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||    |    
T  17241999 aattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattattatta-a 17241901  T
Q  233 aaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    ||||||||||||| ||||||| | ||||||  |||||||    
T  17241900 aaaatgtctaagttggaattagagttcatttgagttttt 17241862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 34 - 270
Target Start/End: Original strand, 26138433 - 26138667
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||    || ||||||| |    
T  26138433 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaataccatgtagttctctttcaaaaatgtttttgtgtgtttc 26138532  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaaggaa 233  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||  ||||| || |||||||  ||||||||||||||||| |  |    
T  26138533 aattgattttaagttttggaaaatggttttgaagaagagaaagaggacgtaaaggcat--gagaaaaagtagtgaagagttggttcaattattaaggaga 26138630  T
Q  234 aaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||||||| | ||| |||||||||| |||||    
T  26138631 aaatgtctaagtagaagttagaattcattgaggtttt 26138667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 15399604 - 15399851
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat--a 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||       
T  15399604 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 15399702  T
Q  121 attagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttc 219  Q
     || ||||||| | |||||||||||| ||||| |||||||||||||||| | || |||||||||||||||| |||  ||| |||||||||| ||||||||    
T  15399703 ttttgtgtgtttc-attgattttaag-ttttgcaaatggttttgaagaagagaaggaggccgtaaaggcatgagacgagacaatagtgaatggttggttc 15399800  T
Q  220 aattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    ||||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  15399801 aattattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 15399851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 15268763 - 15269015
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||||    
T  15268763 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacataccctttgaagggatcaaaattccatgtagttctctctcaaaaa 15268861  T
Q  118 ataattagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttg 215  Q
    ||  ||  ||||| |   |||||||||||| |||||||||||||||||||||| | || |||||||||||||||| ||| |||| |||||||||| ||||    
T  15268862 atggtttttgtgtgtttgattgattttaag-ttttgaaaatggttttgaagaagagaaggaggccgtaaaggcatgagacaagacaatagtgaatggttg 15268960  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||| |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  15268961 gttcgattattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 15269015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 15375856 - 15376102
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat--a 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||       
T  15375856 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 15375954  T
Q  121 attagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttc 219  Q
     || ||||||| | ||||| |||||| ||||| |||||||||||||||| | || |||||||||||||||| |||  ||| |||||||||| ||||||||    
T  15375955 ttttgtgtgtttc-attga-tttaag-ttttgcaaatggttttgaagaagagaaggaggccgtaaaggcatgagacgagacaatagtgaatggttggttc 15376051  T
Q  220 aattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    ||||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  15376052 aattattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 15376102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 15395680 - 15395926
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat--a 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||       
T  15395680 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 15395778  T
Q  121 attagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttc 219  Q
     || ||||||| | ||||| |||||| ||||| |||||||||||||||| | || |||||||||||||||| |||  ||| |||||||||| ||||||||    
T  15395779 ttttgtgtgtttc-attga-tttaag-ttttgcaaatggttttgaagaagagaaggaggccgtaaaggcatgagacgagacaatagtgaatggttggttc 15395875  T
Q  220 aattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    ||||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  15395876 aattattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 15395926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 46660621 - 46660371
Alignment:
Q  19 tgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaa 117  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||    
T  46660621 tgtatgagattttatttt-attgaacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaa 46660523  T
Q  118 ataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttgg 216  Q
     |  || |  ||||   |||||||||||| |||| ||||||||||||||||| | || |||||||||||||||| |||  ||| | |||||||| |||||    
T  46660522 ttgttttgcctgtt-tgattgattttaag-ttttaaaaatggttttgaagaagagaaggaggccgtaaaggcatgagactagacattagtgaatggttgg 46660425  T
Q  217 ttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  46660424 ttcaattattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 46660371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 34 - 227
Target Start/End: Complemental strand, 12786002 - 12785810
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   || |||||||     
T  12786002 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtttttgtgtgtt- 12785904  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattatta 227  Q
      |||||||||||||||| ||||||||||| |||||| | ||||||||||||||||||| ||| || |||| |||||| ||||||||||||||||    
T  12785903 tgattgattttaagttttggaaaatggtttggaagaagagaaagaggccgtaaaggcatgaga-aaaaaatggtgaatagttggttcaattatta 12785810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 34 - 227
Target Start/End: Complemental strand, 17095426 - 17095232
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    || |||||||      
T  17095426 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttgtgtgtt-t 17095328  T
Q  134 aattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattatta 227  Q
     ||||||||||  |||||  |||||||||||||||||| | ||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||    
T  17095327 gattgattttagtttttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaaatggtgaatagttggttcaattatta 17095232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 34 - 270
Target Start/End: Complemental strand, 17087451 - 17087214
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctc-ttccaaaaaataattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||  || |||||||     
T  17087451 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaaatccatgtagttctctttcaaaaaaatgttttgtgtgtt- 17087353  T
Q  133 caattgatttta---agtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaa 229  Q
      ||||||||||     ||||| ||||||||||||||||| | |||||||||||||||||||  ||||| || |||||||  ||||||||||||||||||    
T  17087352 tgattgattttagttttttttttaaaatggttttgaagaagagaaagaggccgtaaaggcat--gagaaaaagtagtgaagagttggttcaattattaaa 17087255  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |  ||||||||||||||| | ||| |||||||||| |||||    
T  17087254 gagaaaatgtctaagtagaagttagaattcattgaggtttt 17087214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 15387664 - 15387437
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| ||||||    || ||||||  |    
T  15387664 ttttattggacttggagaggttttgacctcttacctacatacccttttaacggatcaaaattccatgtagttctctttcaaaaatgtttttgtgtgtatc 15387565  T
Q  134 aattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaagg 231  Q
     |||||||||||||||||  ||||  |||||||||||||  ||||| |||||||||||||  ||||| |||| |||| | |||||||||||||| ||| |    
T  15387564 gattgattttaagttttttggaaatgggttttgaagaaaggaaagaagccgtaaaggcat--gagaaaaaatggtgagtggttggttcaattatgaaa-g 15387468  T
Q  232 aaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||  |||||||| ||||||||| ||||||    
T  15387467 aaaagagtctaagttggaattaaagttcatt 15387437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 1896175 - 1895948
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||   || |||||||     
T  1896175 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatttcatgtagttctctttcaaaaaatgtttttgtgtgtt- 1896077  T
Q  133 caattgattttaagttttt-gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaagg 231  Q
      ||||||||||  ||||| |||||||||||||||||| | ||||||||||||||||| |  ||||| |||| || ||| ||||||||| ||||||        
T  1896076 tgattgattttagttttttggaaaatggttttgaagaagagaaagaggccgtaaaggcgt--gagaaaaaatggtaaatagttggttcagttattattaa 1895979  T
Q  232 aaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||| |||||||| ||||||| | ||||||    
T  1895978 aaaaaggtctaagttggaattagagttcatt 1895948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 34 - 230
Target Start/End: Original strand, 14239672 - 14239866
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||  ||||||    || ||| ||| |    
T  14239672 ttttattggacttggagaggttttggcctcttgcctacatacccttttaagggatc-aaactccatgtagttctctctcaaaaatgtttttgtgagtttc 14239770  T
Q  134 aattgattttaagtttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaag 230  Q
    |||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||  ||||| |||| |||| | |||||||||||| ||||||    
T  14239771 aattgattttaagtttttgaaaatgggttttgaagaagggaaagaggccgtaaaggcat--gagaaaaaatggtgagtggttggttcaatttttaaag 14239866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 15238694 - 15238480
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  |      
T  15238694 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgttt 15238596  T
Q  122 ttagtgtgttccaattgattttaag---------tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaat 210  Q
    || |||||||  || ||||||||||         ||||||||||| |||||||||||| | ||||||||||||||||||| ||||||| |||| |||| |    
T  15238595 ttggtgtgtttgaa-tgattttaagttttttttttttttgaaaatgggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgagt 15238497  T
Q  211 tgttggttcaattatta 227  Q
     ||||||||||||||||    
T  15238496 ggttggttcaattatta 15238480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 15219939 - 15219724
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  |      
T  15219939 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgttt 15219841  T
Q  122 ttagtgtgttccaattgattttaag----------tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaa 209  Q
    || |||||||   ||||||||||||          ||||||||||| |||||||||||| | ||||||||||||||||||| ||||||| |||| ||||     
T  15219840 ttggtgtgtt-tgattgattttaagtttttttttttttttgaaaatgggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgag 15219742  T
Q  210 ttgttggttcaattatta 227  Q
    | ||||||||||||||||    
T  15219741 tggttggttcaattatta 15219724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 34 - 270
Target Start/End: Original strand, 16244663 - 16244906
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    || || ||||      
T  16244663 ttttattggacttggagaggttttaacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttgtatgtt-t 16244761  T
Q  134 aattgatttta----------agtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaatt 223  Q
     ||||||||||            |||||||||||| |||||||||| | ||||| |||||||||||||  ||||| || |||||||  ||||||||||||    
T  16244762 gattgattttagttttttttttttttttgaaaatgattttgaagaagagaaagaagccgtaaaggcat--gagaaaaagtagtgaagagttggttcaatt 16244859  T
Q  224 attaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||  ||||||||||||||| | ||| |||||||||| |||||    
T  16244860 attaaagagaaaatgtctaagtagaagttagaattcattgaggtttt 16244906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 22727178 - 22727408
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgtt 131  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||  |||||||||| ||| |||||| ||||||||| |||||||  |  || |||||||    
T  22727178 ttttagtggacttggagaggttttgtcctcatgcctacatacccatttaagggatc-aaactccatgcagttctctttcaaaaaaagtttttggtgtgtt 22727276  T
Q  132 ccaattgattttaagtttt--tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaa 228  Q
     ||||||||||||||||||    ||||| | ||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||      
T  22727277 tcaattgattttaagttttgaaaaaaataggtttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt-- 22727374  T
Q  229 aggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |  ||||| ||||||||||||||||  |||||||    
T  22727375 attaaaaaagtctaagtaggaattaggattcatt 22727408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 19639216 - 19639413
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  19639216 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 19639314  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||||||    
T  19639315 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattatta 19639413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 202
Target Start/End: Original strand, 26406586 - 26406756
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa--ataattagtgtgtt 131  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||   |  || | |||||    
T  26406586 ttttattggacttggagaggttttaacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaatgtttttttgcgtgtt 26406684  T
Q  132 ccaattgattttaagtttt-tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaa 202  Q
     ||||||||||||| ||||   |||||||||||||| |||| ||||||||| ||||||||| ||||||||||    
T  26406685 tcaattgattttaaattttgaaaaaatggttttgaaaaaaaaaaagaggccttaaaggcatgagagaagaaa 26406756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 1663375 - 1663292
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  1663375 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagagatcaaaattccatgtagttctctttcaaaaa 1663292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 5199591 - 5199820
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||  |  || |||||||     
T  5199591 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaatgttttttgtgtgtt- 5199688  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  5199689 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 5199786  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  5199787 -attaaaaaagtctaagtaggaattaggattcatt 5199820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 9247434 - 9247627
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  9247434 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgctttttgtgtgtt 9247532  T
Q  133 caattgattttaagttt--ttg-aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
       |||||||||| |||  ||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||| ||||||||    
T  9247533 tggttgattttaatttttgttgaaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttagttcaatt 9247627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 14675974 - 14675780
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  | ||| |     
T  14675974 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttttgtgtt 14675876  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
       |||||||||  |||||    |||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  14675875 tggttgattttagttttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 14675780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 14657545 - 14657308
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa-----taattagtgt 128  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | ||||||||||||||  |||||||     |  || ||||    
T  14657545 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttctctctcaaaaaaatgttttttttgtgt 14657447  T
Q  129 gttccaattgattttaagtttttg----aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag--aaatagtgaattgttggttcaat 222  Q
    |||    |||||||||  ||||||    ||||||||||||||||||| ||||||||| |||||||||||||||||  |||| |||||| |||||||||||    
T  14657446 gtttgg-ttgattttagttttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaaatggtgaatggttggttcaat 14657348  T
Q  223 tattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    | ||| |  |||||   ||||||||||||||  |||||||    
T  14657347 tgttataaaaaaaaaagctaagtaggaattaggattcatt 14657308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 17023863 - 17023670
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  17023863 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 17023765  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  17023764 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 17023670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 17009898 - 17009705
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  17009898 ttttagtggacttggagaggttttaacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 17009800  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  17009799 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 17009705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 1663262 - 1663134
Alignment:
Q  135 attgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagag-aagaaatagtgaattgttggttcaattattaaaggaa 233  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||| |||| |||| || |||| |||||| ||||||||||||||||    ||    
T  1663262 attgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaagcatgagagaaaaaaatggtgaatagttggttcaattattattaaaa 1663163  T
Q  234 aaatgtctaagtaggaattaaaattcatt 262  Q
    ||| |||||||| ||||||| | ||||||    
T  1663162 aaaggtctaagttggaattagagttcatt 1663134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 14658394 - 14658588
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa--ataattagtgtgtt 131  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||   |  || |||||||    
T  14658394 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaatgtttttttgtgtgtt 14658492  T
Q  132 ccaattgattttaagtt---tttgaaaatggttttgaagaaaataaagaggccgtaaaggcata--agagaagaaatagtgaattgttggttcaatt 223  Q
        |||||||||| ||   || ||||||||||||| |||||| ||||||||| ||||||||||  |||||| |||| |||||| ||||||||||||    
T  14658493 -tggttgattttaatttttgttggaaaatggttttggagaaaagaaagaggccttaaaggcataagagagaaaaaatggtgaatggttggttcaatt 14658588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 13441525 - 13441296
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataatta---gtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | || |||||||||||  ||||||||  ||    ||||||    
T  13441525 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccgtgtagttctct--caaaaaatttttttttgtgtgt 13441429  T
Q  131 tccaattgattttaagtttttg----aaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattat 225  Q
    |    ||||||||| |||||||    ||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| |    
T  13441428 ttgg-ttgatttta-gtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgt 13441331  T
Q  226 taaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |  |  ||||| ||||||||||||||||  |||||||    
T  13441330 t--attaaaaaagtctaagtaggaattaggattcatt 13441296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 18044397 - 18044165
Alignment:
Q  34 ttttattggacttggagaggttttgacctc-ttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataatta---gtgtg 129  Q
    ||||| |||||||||||  ||||||||||| |||||||| |||||  ||||||||||||| | ||||||||||||||| ||||||||  ||    |||||    
T  18044397 ttttagtggacttggaggagttttgacctcattgcctacgtacccatttaagggatcaaact-ccatgtagttctctttcaaaaaatgtttttttgtgtg 18044299  T
Q  130 ttccaattgattttaagtttttg----aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatta 224  Q
    ||    ||||||||| |||||||    ||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||     
T  18044298 tttgg-ttgatttta-gtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattg 18044201  T
Q  225 ttaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||  |  ||||| ||||||||||||||||  |||||||    
T  18044200 tt--attaaaaaagtctaagtaggaattaggattcatt 18044165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 211
Target Start/End: Original strand, 26461048 - 26461224
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataattagtgtgttc 132  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||||||||||  |  ||  ||||||     
T  26461048 ttttagtggacttgaagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctcttccaaaaatgtttttgatgtgttt 26461146  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaatt 211  Q
      ||||||||| |||||| | ||||| |||||||||| | ||||| |||||||||||||| ||||| || ||||||||||    
T  26461147 agattgatttt-agttttag-aaatgattttgaagaagagaaagaagccgtaaaggcataggagaaaaagatagtgaatt 26461224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 30278742 - 30278548
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  30278742 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttttgtgtgt 30278644  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    |    |||||||| |||||||    |||||||||||||||||| |  |||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  30278643 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 30278548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 24658168 - 24658111
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacatacc 76  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  24658168 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacc 24658111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 15643519 - 15643577
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaa 92  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||    
T  15643519 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaa 15643577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 34848932 - 34848874
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaa 92  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||    
T  34848932 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaa 34848874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 4866042 - 4865973
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    ||||||||||||||  |||| |||||||  ||||||||  ||||||||| |||||| ||||||||||||||    
T  4866042 tgagattttattttatttgg-cttggaggagttttgactccttgcctacgtacccttttaagggatcaaaa 4865973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 6556944 - 6557013
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    ||||||||||| || ||| |||||||||  ||||||||  ||||||||| |||||| ||||||||||||||    
T  6556944 tgagattttatgtt-atttgacttggaggagttttgactccttgcctacgtacccttttaagggatcaaaa 6557013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 40463755 - 40463824
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    ||||||||||||||  |||| |||||||  ||||||||   ||||||||||||||| ||||||||||||||    
T  40463755 tgagattttattttacttgg-cttggaggagttttgactcattgcctacatacccttttaagggatcaaaa 40463824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 21501643 - 21501404
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||      
T  21501643 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatattt 21501545  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  21501544 ttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttca 21501446  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||| | |||||||||||||||| |||||| |||||||    
T  21501445 attattaacgaaaaaatgtctaagtagaaattaagattcatt 21501404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 23 - 262
Target Start/End: Original strand, 37294441 - 37294680
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataa 121  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  ||      
T  37294441 tgagattttatttt-attggacttggagaagttttgacctcttgcctacataccattttaagggatcaaaattccatgtagttctcttccaaaagtattt 37294539  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| |||||||| |||||||||||||||| | ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  37294540 ttggtgtgtttcaattgatttt-agtttttgcaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttca 37294638  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||| |||||||||||||||||| |||||| |||||||    
T  37294639 attattaacggaaaaatgtctaagtagaaattaagattcatt 37294680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 19863511 - 19863740
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||     || ||||||| |    
T  19863511 ttttattggacttggagaggttttgacttcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaagtattttggtgtgtttc 19863610  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttcaattattaaagga 232  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||| | |    
T  19863611 aattgatttta-gtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttcaattattaacgaa 19863709  T
Q  233 aaaa-tgtctaagtaggaattaaaattcatt 262  Q
    |||| ||||||||||| |||||| |||||||    
T  19863710 aaaagtgtctaagtagaaattaagattcatt 19863740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 26 - 227
Target Start/End: Complemental strand, 22899398 - 22899196
Alignment:
Q  26 gattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataatta- 124  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||  ||      
T  22899398 gattttatttttattggacttggaaaggttttgacttcttgcctacatacccttttaagggatcaaact-ccatgtagttctctttcaaaaaatgttttt 22899300  T
Q  125 -gtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaat 222  Q
     |||||||  | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  22899299 ggtgtgtttga-ttgattttaagttttggaaaatggttttgaagaagataaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaat 22899201  T
Q  223 tatta 227  Q
    |||||    
T  22899200 tatta 22899196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 24611908 - 24612115
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---- 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||        
T  24611908 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaaatgt 24612006  T
Q  119 taattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggt 217  Q
    |  || |||||||   |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||| || |||| ||||||  |||||    
T  24612007 tttttggtgtgtt-tgattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggagaaaatggtgaatgattggt 24612105  T
Q  218 tcaattatta 227  Q
    ||||||||||    
T  24612106 tcaattatta 24612115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 24671534 - 24671741
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---- 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||        
T  24671534 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaaatgt 24671632  T
Q  119 taattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggt 217  Q
    |  || |||||||   |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||| || |||| ||||||  |||||    
T  24671633 tttttggtgtgtt-tgattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggagaaaatggtgaatgattggt 24671731  T
Q  218 tcaattatta 227  Q
    ||||||||||    
T  24671732 tcaattatta 24671741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 24708310 - 24708517
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---- 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||        
T  24708310 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaaatgt 24708408  T
Q  119 taattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggt 217  Q
    |  || |||||||   |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||| || |||| ||||||  |||||    
T  24708409 tttttggtgtgtt-tgattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggagaaaatggtgaatgattggt 24708507  T
Q  218 tcaattatta 227  Q
    ||||||||||    
T  24708508 tcaattatta 24708517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 24741304 - 24741511
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---- 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||        
T  24741304 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaaatgt 24741402  T
Q  119 taattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggt 217  Q
    |  || |||||||   |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||| || |||| ||||||  |||||    
T  24741403 tttttggtgtgtt-tgattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggagaaaatggtgaatgattggt 24741501  T
Q  218 tcaattatta 227  Q
    ||||||||||    
T  24741502 tcaattatta 24741511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 24754073 - 24754280
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---- 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||        
T  24754073 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaaatgt 24754171  T
Q  119 taattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggt 217  Q
    |  || |||||||   |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||| || |||| ||||||  |||||    
T  24754172 tttttggtgtgtt-tgattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggagaaaatggtgaatgattggt 24754270  T
Q  218 tcaattatta 227  Q
    ||||||||||    
T  24754271 tcaattatta 24754280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 35 - 227
Target Start/End: Original strand, 30465397 - 30465589
Alignment:
Q  35 tttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||    || |||||||       
T  30465397 tttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttaaaaaatgtttttgtgtgtt-tg 30465495  T
Q  135 attgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagag-aagaaatagtgaattgttggttcaattatta 227  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||| || |||| |||||  ||||||||||||||||    
T  30465496 attgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaaaatggtgaaaggttggttcaattatta 30465589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 20579790 - 20580014
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| |||||  |  || ||||||| |    
T  20579790 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaatgt-ttttgtgtgtttc 20579887  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaagga 232  Q
    |||||||||||||||||  ||||| | ||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| |||         
T  20579888 aattgattttaagttttgaaaaataggtttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtta---tt 20579984  T
Q  233 aaaatgtctaagtaggaattaaaattcatt 262  Q
    |||| |||||||| ||||||| ||||||||    
T  20579985 aaaaagtctaagttggaattagaattcatt 20580014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 271
Target Start/End: Original strand, 28898046 - 28898279
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaata-attagtgtgttc 132  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||  |||||||  || |||||||     
T  28898046 ttttattggacttggagaggttttggcctcttgcctacatacccttttaagggatc-aaactccatgtagttct-ttctcaaaaatatttttgtgtgttt 28898143  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaagg 231  Q
    ||||||||||||||||||  ||||| ||||| |||||   ||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||        
T  28898144 caattgattttaagttttgaaaaatagttttaaagaagggaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatta---- 28898239  T
Q  232 aaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    ||||| |||||||| ||||||| | ||||||  |||||||    
T  28898240 aaaaaggtctaagttggaattagagttcatttgagttttt 28898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 271
Target Start/End: Original strand, 28934441 - 28934674
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaata-attagtgtgttc 132  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||  |||||||  || |||||||     
T  28934441 ttttattggacttggagaggttttggcctcttgcctacatacccttttaagggatc-aaactccatgtagttct-ttctcaaaaatatttttgtgtgttt 28934538  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaagg 231  Q
    ||||||||||||||||||  ||||| ||||| |||||   ||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||        
T  28934539 caattgattttaagttttgaaaaatagttttaaagaagggaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatta---- 28934634  T
Q  232 aaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    ||||| |||||||| ||||||| | ||||||  |||||||    
T  28934635 aaaaaggtctaagttggaattagagttcatttgagttttt 28934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 22268522 - 22268751
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||   || |||||||     
T  22268522 ttttattggacttggtgaggttttgacctcttgcctacatacccttttaagggatcaaaatgccatgtagttctctttcaaaaaatgtttttgtgtgtt- 22268620  T
Q  133 caattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaa 229  Q
      ||||||||||  |||||   ||||||| |||||||||| | ||||| |||||||||||||  ||||| || |||||||  ||||||||||||||||||    
T  22268621 tgattgattttagttttttttggaaaatgattttgaagaagagaaagaagccgtaaaggcat--gagaaaaagtagtgaagagttggttcaattattaaa 22268718  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcatt 262  Q
       ||||||||||||| ||||||| | ||||||    
T  22268719 aagaaaatgtctaagttggaattagagttcatt 22268751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 23888107 - 23887878
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgtt 131  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| |||||||  |  || |||||||    
T  23888107 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaaagtttttggtgtgtt 23888009  T
Q  132 ccaattgattttaagtttttg-aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaa 229  Q
     | |||||||||||||||| | ||||| | ||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||  |    
T  23888008 tcgattgattttaagttttggaaaaataggtttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt--a 23887911  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcatt 262  Q
      ||||| ||||||||||||||||  |||||||    
T  23887910 ttaaaaaagtctaagtaggaattaggattcatt 23887878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 34 - 229
Target Start/End: Original strand, 34494119 - 34494316
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||   |  || | ||||    
T  34494119 ttttattggactttgagaggttttgacctcttgcctacatacccttttaagggatcaaaatgccatgtagttctctttcaaaaaatgtttttttgcgtgt 34494218  T
Q  131 tccaattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaa 228  Q
    |   ||||||||||  |||||  |||||||||||||||||| | |||||||||||||||||||  ||||| |||| |||||  |||||||||||||||||    
T  34494219 t-tgattgattttagtttttttggaaaatggttttgaagaagagaaagaggccgtaaaggcat--gagaaaaaatggtgaagagttggttcaattattaa 34494315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 34 - 270
Target Start/End: Complemental strand, 25195994 - 25195757
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||  ||  || || |     
T  25195994 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgcgtgtt 25195896  T
Q  133 caattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaa 229  Q
      ||||||||||  |||||   |||||||||||||||||| | ||||| |||||||||||||  ||||| || |||||||  ||||||||||||||||||    
T  25195895 tgattgattttagttttttttggaaaatggttttgaagaagagaaagaagccgtaaaggcat--gagaaaaagtagtgaagagttggttcaattattaaa 25195798  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
       ||||||||||||||| | ||| ||||| |||| |||||    
T  25195797 aagaaaatgtctaagtagaagttagaattcgttgaggtttt 25195757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 270
Target Start/End: Original strand, 27285334 - 27285571
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||   || |||||||     
T  27285334 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaaatgtttttgtgtgtt- 27285431  T
Q  133 caattgattttaagtt---tttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaa 229  Q
      ||||||||| | ||   || |||||||||||||||||| | ||||| ||||||||||||| ||| || || |||||||  |||||||| ||| |||||    
T  27285432 tgattgatttttatttttgttggaaaatggttttgaagaagagaaagaagccgtaaaggcatgagaaaaaaagtagtgaagagttggttcgatttttaaa 27285531  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
     | ||||||||||||||| | ||||| |||||||| |||||    
T  27285532 ag-aaaatgtctaagtagaagttaaagttcattgaggtttt 27285571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 23902750 - 23902521
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgtt 131  Q
    ||||| ||||||||||||||||| |||||| || ||||||||||  |||||||||| ||| |||||||||||||||| |||||||  |  || |||||||    
T  23902750 ttttagtggacttggagaggtttngacctcatgnctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaaagtttttggtgtgtt 23902652  T
Q  132 ccaattgattttaagtttttg-aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaa 229  Q
     | |||||||||||||||| | ||||| | ||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||  |    
T  23902651 tcgattgattttaagttttggaaaaataggtttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt--a 23902554  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcatt 262  Q
      ||||| ||||||||||||||||  |||||||    
T  23902553 ttaaaaaagtctaagtaggaattaggattcatt 23902521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 24948002 - 24947772
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  24948002 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 24947904  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  24947903 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 24947806  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  24947805 -attaaaaaagtctaagtaggaattaggattcatt 24947772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 24980867 - 24980637
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  24980867 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 24980769  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  24980768 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 24980671  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  24980670 -attaaaaaagtctaagtaggaattaggattcatt 24980637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 18061235 - 18061472
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    |||| |||| |||||||||  ||||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||    
T  18061235 gtgtttgaggttttattttacttggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaa 18061333  T
Q  118 a--taattagtgtgttccaattgattttaagtt---tttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaatt 211  Q
    |  |  || |||||||    |||||||||| ||   || |||||||||||||||||||| ||||||||| ||||||||||||||| | |||  ||||||     
T  18061334 agtttttttgtgtgtt-tggttgattttaatttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagagaaaaaaggtgaatg 18061432  T
Q  212 gttggttcaattattaaaggaaaaatgtctaagtaggaatta 253  Q
    |||||||||||| ||  |  ||||| ||||||||||||||||    
T  18061433 gttggttcaattgtt--attaaaaaagtctaagtaggaatta 18061472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 247
Target Start/End: Complemental strand, 25211351 - 25211142
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||  ||  || || |     
T  25211351 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgcgtgtt 25211253  T
Q  133 caattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaag 230  Q
      ||||||||||  |||||  ||||||||||||||||   | ||||| |||||||| ||||  ||||| || |||||||  ||||||||||||||||||     
T  25211252 tgattgattttagtttttttggaaaatggttttgaag---agaaagaagccgtaaaagcat--gagaaaaagtagtgaagagttggttcaattattaaa- 25211159  T
Q  231 gaaaaatgtctaagtag 247  Q
     | ||||||||||||||    
T  25211158 aagaaatgtctaagtag 25211142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 247
Target Start/End: Complemental strand, 25275503 - 25275294
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||  ||  || || |     
T  25275503 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgcgtgtt 25275405  T
Q  133 caattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaag 230  Q
      ||||||||||  |||||  ||||||||||||||||   | ||||| |||||||| ||||  ||||| || |||||||  ||||||||||||||||||     
T  25275404 tgattgattttagtttttttggaaaatggttttgaag---agaaagaagccgtaaaagcat--gagaaaaagtagtgaagagttggttcaattattaaa- 25275311  T
Q  231 gaaaaatgtctaagtag 247  Q
     | ||||||||||||||    
T  25275310 aagaaatgtctaagtag 25275294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 7816542 - 7816308
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgtt 131  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||| ||||||||| ||||| |  |  || |||||||    
T  7816542 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgaagttctctttcaaaacacgttttttgtgtgtt 7816444  T
Q  132 ccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatt 226  Q
        |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||    
T  7816443 -tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt 7816346  T
Q  227 a--aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |  |   ||||| ||||||||||||||||  |||||||    
T  7816345 attattaaaaaaagtctaagtaggaattaggattcatt 7816308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 253
Target Start/End: Complemental strand, 22348026 - 22347804
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  22348026 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 22347928  T
Q  133 caattgattttaagtttttg-----aaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatt 226  Q
       |||||||| ||||||||     ||||||||||||||||| | ||||||||| ||||||||||||||| | || | |||||| |||||||||||| ||    
T  22347927 tggttgatttt-agtttttgttggaaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaagtggtgaatggttggttcaattgtt 22347829  T
Q  227 aaaggaaaaatgtctaagtaggaatta 253  Q
      |  ||||| ||||||||||||||||    
T  22347828 --attaaaaaagtctaagtaggaatta 22347804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 22446098 - 22445905
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||   ||  ||||||     
T  22446098 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttatgtgtt- 22446001  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
       |||||||||| |||||    |||||||||||||||||| | ||||| ||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  22446000 tggttgattttaattttttgttggaaaatggttttgaagaagagaaagaagccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 22445905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 24692431 - 24692624
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataatta-gtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | || |||||||||||  |||||  |  ||  |||||||     
T  24692431 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccgtgtagttctctctcaaaatttttttttgtgtgttt 24692529  T
Q  133 caattgattttaagtttttg----aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
       |||||||||  ||||||    ||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  24692530 gg-ttgattttagttttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 24692624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 32449133 - 32449328
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa----taattagtgtg 129  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||    |  || |||||    
T  32449133 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaaatgtttttttgtgtg 32449231  T
Q  130 ttccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    ||    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  32449232 tt-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 32449328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 11560224 - 11560114
Alignment:
Q  136 ttgattttaagtttttgaaaatgg-ttttgaagaaaataaagaggccgtaaaggcataagagaagaaata-gtgaattgttggttcaattattaaaggaa 233  Q
    ||||||||||||||   |||| || |||||||||| | ||||||||| |||||||||||||||| ||| | ||||||||||||||||||| ||||||| |    
T  11560224 ttgattttaagtttgaaaaaaaggattttgaagaatagaaagaggccttaaaggcataagagaaaaaaaaggtgaattgttggttcaatt-ttaaagg-a 11560127  T
Q  234 aaatgtctaagta 246  Q
    |||||||||||||    
T  11560126 aaatgtctaagta 11560114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 25503830 - 25503905
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctctt 110  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||  |||||||||| ||| ||||||||||||||||    
T  25503830 ttttagtggacttggagaggttttgacctcatgcatacatacccatttaagggatc-aaactccatgtagttctctt 25503905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 11546167 - 11546056
Alignment:
Q  136 ttgattttaagtttttgaaaatgg-ttttgaagaaaataaagaggccgtaaaggcataagagaagaaata--gtgaattgttggttcaattattaaagga 232  Q
    ||||||||||||||   |||| || |||||||||| | ||||||||| |||||||||||||||| ||| |  ||||||||||||||||||| |||||||     
T  11546167 ttgattttaagtttgaaaaaaaggattttgaagaatagaaagaggccttaaaggcataagagaaaaaaaaaggtgaattgttggttcaatt-ttaaagg- 11546070  T
Q  233 aaaatgtctaagta 246  Q
    ||||||||||||||    
T  11546069 aaaatgtctaagta 11546056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 26868350 - 26868407
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacatacc 76  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  26868350 gtgtatgagatttcatttt-attggacttggagagattttgacctcttgcctacatacc 26868407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 30930410 - 30930297
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta--aaggaaaaatgtctaagtagg 248  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| |||  ||  ||||| ||||||||||     
T  30930410 gaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgttattaaaaaaaaaagtctaagtaga 30930311  T
Q  249 aattaaaattcatt 262  Q
    |||||  |||||||    
T  30930310 aattaggattcatt 30930297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 20193438 - 20193539
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| | |||| |||||| |||||||||||| || |   ||||| |||||||||||||    
T  20193438 gaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt-attaaaaaaggtctaagtaggaa 20193536  T
Q  251 tta 253  Q
    |||    
T  20193537 tta 20193539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 29881566 - 29881636
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | ||||||   ||||||||  ||||||||| |||||| ||||||||||||||    
T  29881566 tgagattttatttttatttggcttggaagagttttgactccttgcctacgtacccttttaagggatcaaaa 29881636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 30957291 - 30957179
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta--aaggaaaaatgtctaagtagg 248  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||| |||||||| |||  ||  ||||| ||||||||||     
T  30957291 gaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggtt-gttcaattgttattaaaaaaaaaagtctaagtaga 30957193  T
Q  249 aattaaaattcatt 262  Q
    |||||  |||||||    
T  30957192 aattaggattcatt 30957179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 3944216 - 3944144
Alignment:
Q  153 aaaatggttttgaagaaaataaagaggccgtaaaggcataag--agaagaaatagtgaattgttggttcaatt 223  Q
    |||||| |||||||||||| ||||||||| ||||||||||||  | || |||| |||||| ||||||||||||    
T  3944216 aaaatgattttgaagaaaagaaagaggccttaaaggcataagaaaaaaaaaatggtgaatggttggttcaatt 3944144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 11546281 - 11546211
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  11546281 tgagatcttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 11546211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 11560338 - 11560268
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  11560338 tgagatcttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 11560268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 41302021 - 41301951
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  41302021 tgagatcttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 41301951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 24955687 - 24955755
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  24955687 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 24955755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 24964147 - 24964215
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  24964147 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 24964215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 28845157 - 28845089
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  28845157 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 28845089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 28853767 - 28853699
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  28853767 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 28853699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 22700475 - 22700236
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||      
T  22700475 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaagtattt 22700377  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||||| |    
T  22700376 ttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttggttta 22700278  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||| | ||||||||||||||||||||||| |||||||    
T  22700277 attattaacgaaaaaatgtctaagtaggaattaagattcatt 22700236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 19445940 - 19446187
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||         
T  19445940 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatggtt 19446038  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||| ||||||||     
T  19446039 tttgtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaatggttggttcg 19446137  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  19446138 attattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 19446187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 19460749 - 19460996
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||         
T  19460749 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatggtt 19460847  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||| ||||||||     
T  19460848 tttgtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaatggttggttcg 19460946  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||  |||||| |||||||||||||||    
T  19460947 attattaaagaaagagtgtctaagtaaaaattaagattcattgaagtttt 19460996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 27399958 - 27399711
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||  |    
T  27399958 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 27399860  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   |||||||||||||||| |||||||||||||||||| | || |||||||||||||||| ||| |||| |||||||||| |||||||||    
T  27399859 ttttgtgtgtttgattgattttaagtttt-gaaaatggttttgaagaagagaaggaggccgtaaaggcatgagacaagacaatagtgaatggttggttca 27399761  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  27399760 attattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 27399711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 21692749 - 21692976
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    || |||||||      
T  21692749 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttgtgtgtt-t 21692847  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaaggaa 233  Q
     |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||| |||| |||||| |||||||||||||||| |  ||    
T  21692848 gattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaaatggtgaatagttggttcaattattataaaaa 21692947  T
Q  234 aaatgtctaagtaggaattaaaattcatt 262  Q
    ||| |||||||| ||||||| | ||||||    
T  21692948 aaaggtctaagttggaattatagttcatt 21692976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 21707531 - 21707758
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    || |||||||      
T  21707531 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttgtgtgtt-t 21707629  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaaggaa 233  Q
     |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||| |||| |||||| |||||||||||||||| |  ||    
T  21707630 gattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaaatggtgaatagttggttcaattattataaaaa 21707729  T
Q  234 aaatgtctaagtaggaattaaaattcatt 262  Q
    ||| |||||||| ||||||| | ||||||    
T  21707730 aaaggtctaagttggaattagagttcatt 21707758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 19556201 - 19556448
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||    
T  19556201 tgagattttatttt-attagacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattat 19556299  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   |||||||||||| ||||| |||||||||||||||| | || |||||||||||||||| |||  ||| |||||||||| |||||||||    
T  19556300 ttttgtgtgtttgattgattttaag-ttttgcaaatggttttgaagaagagaaggaggccgtaaaggcatgagacgagacaatagtgaatggttggttca 19556398  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  19556399 attattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 19556448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 27388897 - 27388650
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||  |    
T  27388897 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgcagttctctctcaaaaaattgt 27388799  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   |||||||||||||||| |||||||||||||||||| | || |||||||||||||||| ||| |||| |||||||||| |||||||||    
T  27388798 ttttgtgtgtttgattgattttaagtttt-gaaaatggttttgaagaagagaaggaggccgtaaaggcatgagacaagacaatagtgaatggttggttca 27388700  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||| ||| |||||| |||||||||||||||    
T  27388699 attattaaagaaagagtgtctaaatagaaattaagattcattgaagtttt 27388650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 10115196 - 10115402
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||| |    
T  10115196 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctc-tctcaaaaatatt 10115293  T
Q  123 tagtgtgttccaattgattttaagtttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttca 220  Q
    | ||| ||| ||||||||||||||||||||||||| ||||||||||||   ||||| ||||||||||||| ||||||| |||| |||||| |||||||||    
T  10115294 ttgtgagtttcaattgattttaagtttttgaaaatgggttttgaagaagggaaagaagccgtaaaggcatgagagaagaaaatggtgaatggttggttca 10115393  T
Q  221 attattaaa 229  Q
    |||||||||    
T  10115394 attattaaa 10115402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 17260598 - 17260369
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||| || ||| ||| |    
T  17260598 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctc-tctcaaaaatattttgtgagtttc 17260500  T
Q  134 aattga-ttttaag-tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaa 229  Q
    |||||| ||||||| ||||||||||| ||||||||||||   ||||| ||||||||||||| ||||||| |||| |||||| ||||||||||||||| ||    
T  17260499 aattgatttttaagttttttgaaaatgggttttgaagaagggaaagaagccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattattgaa 17260400  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcatt 262  Q
      ||||| |||||||| ||||||| | ||||||    
T  17260399 --aaaaaagtctaagttggaattagagttcatt 17260369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 18086161 - 18085984
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    |    
T  18086161 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatattt 18086063  T
Q  123 tagtgtgttccaattgattttaagttt---ttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa 198  Q
    | ||||||| |||||||||||||||||      ||||||||||| |||||   ||||||||| ||||||||| ||||||    
T  18086062 ttgtgtgtttcaattgattttaagtttaaaaaaaaaatggttttaaagaagggaaagaggccataaaggcatgagagaa 18085984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 29530323 - 29530415
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa 116  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  29530323 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaa 29530415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 227
Target Start/End: Complemental strand, 20831981 - 20831784
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  20831981 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 20831883  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    ||||||||||||||||||||  |||||||| ||||||||||||||||| |||| |||||| ||||||||||||||||    
T  20831882 tggttgatttt-agtttttgttggaaaatggttttgaagaaaaggaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattatta 20831784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 253
Target Start/End: Original strand, 34306002 - 34306224
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataa---ttagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | ||||||||||||||  || |||| |    || ||||||    
T  34306002 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttctctctcagaaaaaagctttttgtgtgt 34306100  T
Q  131 tccaattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatt 226  Q
    |    |||||||||| ||||    |||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||    
T  34306101 ttgg-ttgattttaatttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt 34306199  T
Q  227 aaaggaaaaatgtctaagtaggaatta 253  Q
      |  ||||| ||||||||||||||||    
T  34306200 --attaaaaaagtctaagtaggaatta 34306224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 39757865 - 39757673
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaaataattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||| || ||||| |  || |||||||     
T  39757865 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaagttttttgtgtgtt- 39757768  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaatt 223  Q
       |||||||| |||||||    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |||||| |||||| |||||    
T  39757767 tggttgatttt-agtttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaaggaaatggtgaatggttggtccaatt 39757673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 34 - 253
Target Start/End: Original strand, 34263203 - 34263425
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataa---ttagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | ||||||||||||||  || |||| |    || || |||    
T  34263203 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttctctctcagaaaaaagctttttgtatgt 34263301  T
Q  131 tccaattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatt 226  Q
    |    |||||||||| ||||    |||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||    
T  34263302 ttgg-ttgattttaatttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt 34263400  T
Q  227 aaaggaaaaatgtctaagtaggaatta 253  Q
      |  ||||| ||||||||||||||||    
T  34263401 --attaaaaaagtctaagtaggaatta 34263425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 28269103 - 28269334
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  28269103 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatttttttttgtgtgt 28269201  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattat 225  Q
    |    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| |    
T  28269202 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgt 28269299  T
Q  226 taaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |  |  ||||| ||||||||||||||||  |||||||    
T  28269300 t--attaaaaaagtctaagtaggaattaggattcatt 28269334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 12651423 - 12651193
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgtt 131  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||  |  || |||||||    
T  12651423 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaaagttttttgtgtgtt 12651325  T
Q  132 ccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatt 226  Q
        |||||||| |||||||    |||||||||||||||||| | ||||||||| |||| |||||||||| | |||| |||||| |||||||||||| ||    
T  12651324 -tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaagcataagagagaaaaatggtgaatggttggttcaattgtt 12651227  T
Q  227 aaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
      |  ||||| ||||||||||||||||  |||||||    
T  12651226 --attaaaaaagtctaagtaggaattaggattcatt 12651193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 12666344 - 12666114
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgtt 131  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||  |  || |||||||    
T  12666344 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaaagttttttgtgtgtt 12666246  T
Q  132 ccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatt 226  Q
        |||||||| |||||||    |||||||||||||||||| | ||||||||| |||| |||||||||| | |||| |||||| |||||||||||| ||    
T  12666245 -tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaagcataagagagaaaaatggtgaatggttggttcaattgtt 12666148  T
Q  227 aaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
      |  ||||| ||||||||||||||||  |||||||    
T  12666147 --attaaaaaagtctaagtaggaattaggattcatt 12666114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 20833801 - 20833743
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaa 92  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||    
T  20833801 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaa 20833743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 28878090 - 28878019
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttc 106  Q
    ||||| ||||||||||||||||||||| || |||||||||||||  |||||||||| ||| ||||||||||||    
T  28878090 ttttagtggacttggagaggttttgacgtcatgcctacatacccatttaagggatc-aaactccatgtagttc 28878019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 28893302 - 28893231
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttc 106  Q
    ||||| ||||||||||||||||||||| || |||||||||||||  |||||||||| ||| ||||||||||||    
T  28893302 ttttagtggacttggagaggttttgacgtcatgcctacatacccatttaagggatc-aaactccatgtagttc 28893231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 28877963 - 28877891
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttcaatt 223  Q
    |||||||||||||||||| | ||||||||| ||||||||||||| | | |||| |||||| ||||||||||||    
T  28877963 gaaaatggttttgaagaagagaaagaggccttaaaggcataagagggaaaaatggtgaatggttggttcaatt 28877891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 28893173 - 28893101
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttcaatt 223  Q
    |||||||||||||||||| | ||||||||| ||||||||||||| | | |||| |||||| ||||||||||||    
T  28893173 gaaaatggttttgaagaagagaaagaggccttaaaggcataagagggaaaaatggtgaatggttggttcaatt 28893101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 23121906 - 23121836
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  23121906 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 23121836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 15943384 - 15943452
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  15943384 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 15943452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 35148178 - 35148110
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  35148178 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 35148110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 41232709 - 41232777
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  41232709 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 41232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 42564771 - 42564839
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  42564771 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 42564839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 42573395 - 42573463
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  42573395 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 42573463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 9e-76; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 16231097 - 16230852
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  16231097 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaag 16230999  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||    
T  16230998 tatttttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttg 16230900  T
Q  216 gttcaattattaaaggaaaaa-tgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | ||||| ||||||||||| |||||| |||||||    
T  16230899 gttcaattattaacgaaaaaagtgtctaagtagaaattaagattcatt 16230852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 15815996 - 15816244
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||      
T  15815996 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaagtattt 15816094  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | || || |||||||||||||    
T  15816095 ttggtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatggttaattgttggttca 15816193  T
Q  221 attattaaag-gaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||| |  |||||||||||||||| |||||| |||||||||||||||    
T  15816194 attattaacgaaaaaaatgtctaagtagaaattaagattcattgaagtttt 15816244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 20456995 - 20456756
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa--aata 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  | |     
T  20456995 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaagtattt 20456897  T
Q  121 attagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggttc 219  Q
     || ||||||| ||||||||||| |||||||| |||||||||||||||| | |||||||||||||||||||  ||||| || ||||||||||||||||||    
T  20456896 ttttgtgtgtttcaattgatttt-agtttttg-aaatggttttgaagaagagaaagaggccgtaaaggcatgggagaaaaagatagtgaattgttggttc 20456799  T
Q  220 aattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||| | |||||||||||||| | |||||| |||||||    
T  20456798 aattattaacgaaaaaatgtctaagtggaaattaagattcatt 20456756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 15434617 - 15434370
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||  |    
T  15434617 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 15434519  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   |||||||||||| ||||| |||||||||||||||| | || |||||||||||||||| |||  ||| |||||||||| |||||||||    
T  15434518 ttttgtgtgtttgattgattttaag-ttttgcaaatggttttgaagaagagaaggaggccgtaaaggcatgagacgagacaatagtgaatggttggttca 15434420  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  15434419 attattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 15434370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 34 - 271
Target Start/End: Original strand, 20361922 - 20362163
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa----ataattagtgtg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    ||  || |||||    
T  20361922 ttttattggacttggagaggttttgacctcttgcctacatacccttttaaggaatcaaaattccatgtagttctctttcaaaaaaaatattttttgtgtg 20362021  T
Q  130 ttccaattgattttaagtttt-tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
    || ||||||||||||||||||   ||||||||||| |||||  |||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  20362022 tttcaattgattttaagttttgaaaaaatggttttaaagaaggtaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatta 20362121  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    ||  ||||  |||||||| ||||||||| ||||||  |||||||    
T  20362122 aa--aaaagggtctaagttggaattaaagttcatttgagttttt 20362163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 34 - 271
Target Start/End: Complemental strand, 20548989 - 20548748
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa----ataattagtgtg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    ||  || |||||    
T  20548989 ttttattggacttggagaggttttgacctcttgcctacatacccttttaaggaatcaaaattccatgtagttctctttcaaaaaaaatattttttgtgtg 20548890  T
Q  130 ttccaattgattttaagtttt-tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
    || ||||||||||||||||||   ||||||||||| |||||  |||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  20548889 tttcaattgattttaagttttgaaaaaatggttttaaagaaggtaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatta 20548790  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    ||  ||||  |||||||| ||||||||| ||||||  |||||||    
T  20548789 aa--aaaagggtctaagttggaattaaagttcatttgagttttt 20548748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 31447267 - 31447461
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||     || ||||||| |    
T  31447267 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtaattctctttcaaaagtgtttttgtgtgtttc 31447366  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata-gtgaattgttggttcaattatta 227  Q
    ||||||||||||||||| |||| ||||||||||||| | ||||||| ||||||||||| |||||||||| | |||||| ||||||||||||||||    
T  31447367 aattgattttaagttttggaaagtggttttgaagaagagaaagaggtcgtaaaggcatgagagaagaaaaaggtgaatggttggttcaattatta 31447461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 20343001 - 20343193
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   || |||||||     
T  20343001 ttttagtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtttttgtgtgttt 20343100  T
Q  133 caattgattttaagtttt-tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagag-aagaaatagtgaattgttggttcaatt 223  Q
    ||||||||||||| ||||   ||||||||||||||||| | ||||||||| ||||||||| |||| || |||| |||||| ||||||||||||    
T  20343101 caattgattttaaattttgaaaaaatggttttgaagaagagaaagaggccttaaaggcatgagagaaaaaaatggtgaatggttggttcaatt 20343193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 16197327 - 16197556
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||  ||  || || |     
T  16197327 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatgccatgtagttctctttcaaaaaatgttttttgcgtgtt 16197426  T
Q  133 caattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaag 230  Q
      ||||||||||  |||||  |||||||||||||||||| | ||||| |||||||||||||  ||||| || |||||||  ||||||||||||||||||     
T  16197427 tgattgattttagtttttttggaaaatggttttgaagaagagaaagaagccgtaaaggcat--gagaaaaagtagtgaagagttggttcaattattaaaa 16197524  T
Q  231 gaaaaatgtctaagtaggaattaaaattcatt 262  Q
      ||||||||||||| ||||||| | ||||||    
T  16197525 agaaaatgtctaagttggaattagagttcatt 16197556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 16212336 - 16212565
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||  ||  || || |     
T  16212336 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatgccatgtagttctctttcaaaaaatgttttttgcgtgtt 16212435  T
Q  133 caattgattttaagttttt--gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaag 230  Q
      ||||||||||  |||||  |||||||||||||||||| | ||||| |||||||||||||  ||||| || |||||||  ||||||||||||||||||     
T  16212436 tgattgattttagtttttttggaaaatggttttgaagaagagaaagaagccgtaaaggcat--gagaaaaagtagtgaagagttggttcaattattaaaa 16212533  T
Q  231 gaaaaatgtctaagtaggaattaaaattcatt 262  Q
      ||||||||||||| ||||||| | ||||||    
T  16212534 agaaaatgtctaagttggaattagagttcatt 16212565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 20329457 - 20329649
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   || |||||||     
T  20329457 ttttagtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtttttgtgtgttt 20329556  T
Q  133 caattgattttaagtttt-tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagag-aagaaatagtgaattgttggttcaatt 223  Q
    ||||||||||||| ||||   ||||||||||||||||| | ||||||||| |||| |||| |||| || |||| |||||| ||||||||||||    
T  20329557 caattgattttaaattttgaaaaaatggttttgaagaagagaaagaggccttaaaagcatgagagaaaaaaatggtgaatggttggttcaatt 20329649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 20490000 - 20489853
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaata-- 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||      
T  20490000 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaagtatt 20489902  T
Q  121 -attagtgtgttccaattgattttaagtttttgaaaatggttttgaagaa 169  Q
      || ||||||| ||||||||||| |||||||||||||||||||||||||    
T  20489901 tttttgtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaa 20489853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 271
Target Start/End: Original strand, 16662884 - 16663117
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaata-attagtgtgttc 132  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||  |||||||  || |||||||     
T  16662884 ttttattggacttggagaggttttggcctcttgcctacatacccttttaagggatc-aaactccatgtagttct-ttctcaaaaatatttttgtgtgttt 16662981  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaagg 231  Q
    ||||||||||||||||||  ||||| ||||| |||||   ||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||        
T  16662982 caattgattttaagttttgaaaaatagttttaaagaagggaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatta---- 16663077  T
Q  232 aaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    ||||| |||||||| ||||||| | ||||||  |||||||    
T  16663078 aaaaaggtctaagttggaattagagttcatttgagttttt 16663117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 16406162 - 16405974
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    || ||| ||| |    
T  16406162 ttttagtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttgtgcgtttc 16406063  T
Q  134 aattgattttaagtttttg--aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttc 219  Q
    |||||||||| |  |||||  ||||||||||||||||| | ||||||||| ||||||||| ||||||| |||| |||||| ||||||||    
T  16406062 aattgatttttaaattttgaaaaaatggttttgaagaagagaaagaggccttaaaggcatgagagaagaaaatggtgaatggttggttc 16405974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 21730884 - 21730651
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa----taattagtgtg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||    |  || | |||    
T  21730884 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatgtcatgtagttctctttcaaaaaaaatgttttttgcgtg 21730785  T
Q  130 ttccaattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattatt 226  Q
    ||   ||||||||||  |||||   |||||||||||||||||| | ||||| ||||||||||||| ||| || || |||||||  |||||||||||| ||    
T  21730784 tt-tgattgattttagttttttttggaaaatggttttgaagaagagaaagaagccgtaaaggcatgaga-aaaaagtagtgaagagttggttcaattttt 21730687  T
Q  227 aaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||   ||||||||||||| ||||||| | ||||||    
T  21730686 aaaaagaaaatgtctaagttggaattagagttcatt 21730651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 21731915 - 21731682
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa----taattagtgtg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||    |  || | |||    
T  21731915 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatgccatgtagttctctttcaaaaaaaatgttttttgcgtg 21731816  T
Q  130 ttccaattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattatt 226  Q
    ||   ||||||||||  |||||   |||||||||||||||||| | ||||| ||||||||||||| ||| || || |||| ||  |||||||||||| ||    
T  21731815 tt-tgattgattttagttttttttggaaaatggttttgaagaagagaaagaagccgtaaaggcatgaga-aaaaagtagtaaagagttggttcaattttt 21731718  T
Q  227 aaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||   ||||||||||||| ||||||| | ||||||    
T  21731717 aaaaagaaaatgtctaagttggaattagagttcatt 21731682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 253
Target Start/End: Original strand, 4147067 - 4147288
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||| ||  ||||| |     
T  4147067 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatattttttgtgtgtt 4147165  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  4147166 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 4147263  T
Q  228 aaggaaaaatgtctaagtaggaatta 253  Q
     |  ||||| ||||||||||||||||    
T  4147264 -attaaaaaagtctaagtaggaatta 4147288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 262
Target Start/End: Complemental strand, 5138167 - 5137942
Alignment:
Q  41 ggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa----taattagtgtgttccaat 136  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||| || |||||||||||||| |||||||    |  || ||||||| ||||    
T  5138167 ggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaactt-catgtagttctctttcaaaaaaaagttttttggtgtgtttcaat 5138069  T
Q  137 tgattttaagtttt-tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaaggaaa 234  Q
    ||||||||||||||   ||||| | ||||||||| | ||||||||| ||||||||||||| ||| |||| |||||| |||||||||||| || |   |||    
T  5138068 tgattttaagttttgaaaaaataggtttgaagaagagaaagaggccttaaaggcataagataagaaaatggtgaatggttggttcaattctt-attaaaa 5137970  T
Q  235 aatgtctaagtaggaattaaaattcatt 262  Q
    || ||||||||||||||||  |||||||    
T  5137969 aaagtctaagtaggaattaggattcatt 5137942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 26798519 - 26798289
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  26798519 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 26798421  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  26798420 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 26798323  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  26798322 -attaaaaaagtctaagtaggaattaggattcatt 26798289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 21886633 - 21886826
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  21886633 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 21886731  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | ||||||||||| ||||||||||||    
T  21886732 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatagtgaatggttggttcaatt 21886826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 18294000 - 18293770
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  18294000 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 18293902  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||     
T  18293901 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt- 18293804  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  18293803 -attaaaaaagtctaagtaggaattaggattcatt 18293770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 21481974 - 21481744
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  21481974 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 21481876  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||     
T  21481875 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt- 21481778  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  21481777 -attaaaaaagtctaagtaggaattaggattcatt 21481744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 191
Target Start/End: Original strand, 13480655 - 13480813
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||    || |||||||      
T  13480655 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaatgtttttgtgtgtt-t 13480752  T
Q  134 aattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcat 191  Q
     ||||||||| |||||||    |||||||||||||||||| | ||||| |||||||||||||    
T  13480753 gattgatttt-agtttttgttggaaaatggttttgaagaagagaaagaagccgtaaaggcat 13480813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 21506079 - 21505970
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagag-aagaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||| ||||||| ||| | ||||||||||||| ||  |  ||||| |||||||||||||    
T  21506079 gaaaatggttttggagaaaagaaagaggccttaaaggcataagagaaagaaatggtg-agtgttggttcaattgtt-tattaaaaaagtctaagtaggaa 21505982  T
Q  251 ttaaaattcatt 262  Q
    |||  |||||||    
T  21505981 ttaggattcatt 21505970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 18289483 - 18289410
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataa--gagaagaaatagtgaattgttggttcaatt 223  Q
    |||||||||||||||||| | ||||||||| |||||||||||  ||||| |||| |||||| ||||||||||||    
T  18289483 gaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaaatggtgaatggttggttcaatt 18289410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 20321017 - 20321087
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  20321017 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 20321087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 22080522 - 22080592
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  22080522 tgagatcttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 22080592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 31541169 - 31541101
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  31541169 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 31541101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 31549738 - 31549670
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  31549738 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 31549670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 9e-73; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 15004371 - 15004624
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||    
T  15004371 gtgtatgagatttcatttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaa 15004470  T
Q  118 ataattagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttg 215  Q
    ||  ||  ||||| |   |||||||||||| |||||||||||||||||||||| | || |||||||||||||||| ||| |||| |||||||||| ||||    
T  15004471 atggtttttgtgtgtttgattgattttaag-ttttgaaaatggttttgaagaagagaaggaggccgtaaaggcatgagacaagacaatagtgaatggttg 15004569  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||| |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  15004570 gttcgattattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 15004624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 10852268 - 10852021
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    |    
T  10852268 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaaggtatcaaaattccatgtagttctctttcaaaaatggtt 10852170  T
Q  123 ta-gtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagag-aagaaatagtgaattgttggttca 220  Q
    |  ||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||| || ||||||||||| ||||||||     
T  10852169 tttgtgtgtttcaattgatttta-gtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaaaatagtgaatggttggttcg 10852071  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  10852070 attattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 10852021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 13894931 - 13895178
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataa 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||         
T  13894931 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatggtt 13895029  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttca 220  Q
    || ||||||| ||||||||||| || |||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||| ||||||||     
T  13895030 tttgtgtgtttcaattgatttt-agattttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaatggttggttcg 13895128  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  13895129 attattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 13895178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 30241355 - 30241549
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    || ||||||| |    
T  30241355 ttttagtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttgtgtgtttc 30241454  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  30241455 aattggttttaagtttttgaaaatggttttgaagaagataaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatta 30241549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 34 - 271
Target Start/End: Complemental strand, 7369683 - 7369447
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    || ||||||| |    
T  7369683 ttttattggacttagagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttgtgtgtttc 7369584  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaagga 232  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||  |  |    
T  7369583 aattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatt--atta 7369486  T
Q  233 aaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    |||| |||||||| ||||||| | ||||||  |||||||    
T  7369485 aaaaggtctaagttggaattagagttcatttgagttttt 7369447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 16439272 - 16439467
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   || |||||||     
T  16439272 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtttttgtgtgttt 16439371  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
    |||||||||||||||||| |||||| ||||||||||| | ||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  16439372 caattgattttaagttttggaaaatagttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatta 16439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 16454210 - 16454405
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   || |||||||     
T  16454210 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtttttgtgtgttt 16454309  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
    |||||||||||||||||| |||||| ||||||||||| | ||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  16454310 caattgattttaagttttggaaaatagttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaattatta 16454405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 16051941 - 16051704
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    |    
T  16051941 tgagattttatttt-attggacttggagagattttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgttt 16051843  T
Q  123 tagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaat 222  Q
    | |||||||   ||||||||||||| || |||||||||||||||||| | ||||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  16051842 ttgtgtgtt-tgattgattttaagtgttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaaatggtgaatagttggttcaat 16051744  T
Q  223 tattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||    ||||| |||||||| ||||||| | ||||||    
T  16051743 tattattaaaaaaaggtctaagttggaattagagttcatt 16051704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 34 - 229
Target Start/End: Complemental strand, 34194929 - 34194732
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||  || |||||||     
T  34194929 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatattttttgtgtgttt 34194830  T
Q  133 caattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaa 229  Q
    ||||||||||||||||||  ||||||||||| |||||   ||||||| ||||||||||| ||||||| |||| ||||||  |||||||||||||||||    
T  34194829 caattgattttaagttttgaaaaatggttttaaagaagggaaagagggcgtaaaggcatgagagaagaaaatggtgaatgattggttcaattattaaa 34194732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 271
Target Start/End: Original strand, 34195780 - 34196025
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| |    
T  34195780 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttc-aaaaatatt 34195877  T
Q  123 tagtg--tgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttc 219  Q
    | |||  |||| ||||||||||||||||||  ||||||||||| |||||    |||||||||||||||||| ||||||| |||| |||||| |||| |||    
T  34195878 ttgtgtatgtttcaattgattttaagttttgaaaaatggttttaaagaaggggaagaggccgtaaaggcatgagagaagaaaatggtgaatggttgattc 34195977  T
Q  220 aattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    ||||||||    ||||| |||||||| ||||||| | ||||||  |||||||    
T  34195978 aattatta----aaaaaggtctaagttggaattagagttcatttgagttttt 34196025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 262
Target Start/End: Original strand, 10839028 - 10839265
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||  ||||||    |    
T  10839028 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatc-aaactccatgtagttctctctcaaaaatgttt 10839125  T
Q  123 tagtgtgttccaattgattttaag--tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttc 219  Q
    | ||||||| ||||||||||||||  ||||||||||| |||||||||||||  ||||| |||||||||||||  ||||| |||| |||| | ||||||||    
T  10839126 ttgtgtgtttcaattgattttaagtttttttgaaaatgggttttgaagaaaggaaagaagccgtaaaggcat--gagaaaaaatggtgagtggttggttc 10839223  T
Q  220 aattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||||| |||||  |||||||| ||||||||| ||||||    
T  10839224 aattattaaa-gaaaagagtctaagttggaattaaagttcatt 10839265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 16037214 - 16036977
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    |    
T  16037214 tgagattttatttt-attggacttggagagattttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgttt 16037116  T
Q  123 tagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcat-aagagaagaaatagtgaattgttggttcaa 221  Q
    | |||||||   ||||||||||||| || |||||||||||||||||| | ||||||||||| ||||||| | ||||| |||| |||||| ||||||||||    
T  16037115 ttgtgtgtt-tgattgattttaagtgttggaaaatggttttgaagaagagaaagaggccgt-aaggcatgaggagaaaaaatggtgaatagttggttcaa 16037018  T
Q  222 ttattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||    ||||| |||||||| ||||||| | ||||||    
T  16037017 ttattattaaaaaaaggtctaagttggaattagagttcatt 16036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 271
Target Start/End: Complemental strand, 23765564 - 23765313
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa-ataa 121  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||  |      
T  23765564 tgagattttatttt-attggactttgagaggttttgacctcttgcctacatacccttttaagggatcaaaatttcatgtagttctctttcaaaaatgttt 23765466  T
Q  122 ttagtgtgttccaattgattttaag----tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttg 215  Q
    || |||||||   ||||||||||||    ||||| ||||| |||||||||||| | |||||| | |||||||||| ||||||| |||| |||||| ||||    
T  23765465 ttggtgtgtt-tgattgattttaagttttttttttaaaatgggttttgaagaagagaaagagactgtaaaggcatgagagaagaaaatggtgaatggttg 23765367  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
    ||| |||||||  |  |||||||||||||| ||||||| | ||||||  |||||||    
T  23765366 gttgaattatt--attaaaaatgtctaagttggaattagagttcatttgagttttt 23765313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 23231222 - 23231139
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  23231222 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaa 23231139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 15353014 - 15353244
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  15353014 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 15353112  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  15353113 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 15353210  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  15353211 -attaaaaaagtctaagtaggaattaggattcatt 15353244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 16498265 - 16498495
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  16498265 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 16498363  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       || ||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  16498364 tggttaatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 16498461  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  16498462 -attaaaaaagtctaagtaggaattaggattcatt 16498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 16507572 - 16507802
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  16507572 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 16507670  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       || ||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  16507671 tggttaatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 16507768  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  16507769 -attaaaaaagtctaagtaggaattaggattcatt 16507802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 16522676 - 16522906
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  16522676 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 16522774  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       || ||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  16522775 tggttaatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 16522872  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  16522873 -attaaaaaagtctaagtaggaattaggattcatt 16522906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 18627437 - 18627206
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||||  ||  ||||| |     
T  18627437 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttgtgtgtt 18627339  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||||  |||||    |||||||||||||||||| |  |||||||| ||||||||||||||||| |||| |||||| |||||||||||| ||     
T  18627338 tggttgattttagttttttgttggaaaatggttttgaagaagaggaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaattgtt- 18627240  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  18627239 -attaaaaaagtctaagtaggaattaggattcatt 18627206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 2969336 - 2969105
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgtt 131  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||  |  || |||||||    
T  2969336 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaagtttttttgtgtgtt 2969238  T
Q  132 ccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaattatt 226  Q
        |||||||| |||||||    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||||||||| ||    
T  2969237 -tggttgatttt-agtttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaaggaaatggtgaa-tgttggttcaattgtt 2969141  T
Q  227 aaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |   ||||| ||||||||||| ||||  |||||||    
T  2969140 tattaaaaaaagtctaagtagggattaggattcatt 2969105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 11361699 - 11361507
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaaataattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||| || ||||  |  || |||||||     
T  11361699 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaggtttttggtgtgtt- 11361602  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaatt 223  Q
       |||||||||| |||||    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| |||||||||||||    
T  11361601 tggttgattttaattttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaaggaaatggtgaa-tgttggttcaatt 11361507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 2150460 - 2150230
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  2150460 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 2150362  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    ||||||||||||||||||||  |||||||| |||||||||||||||| ||||| ||||| ||||||||||||| ||     
T  2150361 tggttgatttt-agtttttgttggaaaatggttttgaagaaaaggaagaggccttaaaggcataagagaaggaaatggtgaa-tgttggttcaattgtt- 2150265  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  2150264 tattaaaaaagtctaagtaggaattaggattcatt 2150230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 2165671 - 2165441
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  2165671 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 2165573  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    ||||||||||||||||||||  |||||||| |||||||||||||||| ||||| ||||| ||||||||||||| ||     
T  2165572 tggttgatttt-agtttttgttggaaaatggttttgaagaaaaggaagaggccttaaaggcataagagaaggaaatggtgaa-tgttggttcaattgtt- 2165476  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
     |  ||||| ||||||||||||||||  |||||||    
T  2165475 tattaaaaaagtctaagtaggaattaggattcatt 2165441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 48217599 - 48217365
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa------taattagtg 127  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| |||||||      |  || |||    
T  48217599 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgttttttttttgtg 48217501  T
Q  128 tgttccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaat 222  Q
    ||||    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| |||||||||||    
T  48217500 tgtt-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaat 48217403  T
Q  223 tattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    | ||  |  ||||| ||||||||||||||||  |||||||    
T  48217402 tgtt--attaaaaaagtctaagtaggaattaggattcatt 48217365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 226
Target Start/End: Complemental strand, 4186760 - 4186559
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataa-------ttagt 126  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||| ||       || ||    
T  4186760 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaaaaaatgtctttttgt 4186662  T
Q  127 gtgttccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaa 221  Q
    |||||    |||||||| |||||||    ||||||| |||||||||| | ||||||||| ||||||||||||||||| |||| |||||| ||||||||||    
T  4186661 gtgtt-tggttgatttt-agtttttgttggaaaatgattttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaa 4186564  T
Q  222 ttatt 226  Q
    |||||    
T  4186563 ttatt 4186559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 5246691 - 5246487
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  |    
T  5246691 tgagattttattttacttggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtt 5246593  T
Q  123 tagtgtgt-tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttgg 216  Q
    |  ||||| |    |||||||| |||||||    |||||||||||||||||| |  ||||| || ||||||||||||||| | |||| |||||| |||||    
T  5246592 ttttgtgtgtttggttgatttt-agtttttgttggaaaatggttttgaagaagaggaagagaccttaaaggcataagagagaaaaatggtgaatggttgg 5246494  T
Q  217 ttcaatt 223  Q
    |||||||    
T  5246493 ttcaatt 5246487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 20593139 - 20592945
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  20593139 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttttgtgtgt 20593041  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    |    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  20593040 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 20592945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 13735812 - 13736044
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  || || |     
T  13735812 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgcgtgtt 13735910  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattatta 227  Q
       |||||||||  |||||    ||||||| |||||||||| | ||||||||| ||||||||||||||| | |||  |||||| |||||||||||| ||     
T  13735911 tggttgattttagttttttgttggaaaatgattttgaagaagagaaagaggccttaaaggcataagagagaaaaagggtgaatggttggttcaattgtt- 13736009  T
Q  228 aaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |   ||||| ||||||||||||||||  |||||||    
T  13736010 attaaaaaaggtctaagtaggaattaggattcatt 13736044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 247
Target Start/End: Complemental strand, 4055742 - 4055524
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  4055742 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttttgtgtgt 4055644  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttcaattat 225  Q
    |    |||||||||  |||||    |||||||||||||||||| | ||||| ||||||||||||| ||| || | | |||||||  |||||||| ||| |    
T  4055643 t-tggttgattttagttttttgttggaaaatggttttgaagaagagaaagaagccgtaaaggcatgagaaaaaagagtagtgaagagttggttcgatttt 4055545  T
Q  226 taaaggaaaaatgtctaagtag 247  Q
    |||| | |||||||||||||||    
T  4055544 taaaag-aaaatgtctaagtag 4055524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 10921241 - 10921350
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||  |  ||||| |||||||||||||    
T  10921241 gaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt--attaaaaaagtctaagtaggaa 10921338  T
Q  251 ttaaaattcatt 262  Q
    |||  |||||||    
T  10921339 ttaggattcatt 10921350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 11414163 - 11414271
Alignment:
Q  153 aaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaat 251  Q
    ||||||| ||||||||| | ||||||||| || |||||||||||| | ||||||||||| |||||||||||| || ||  ||||| ||||||||||||||    
T  11414163 aaaatggctttgaagaagagaaagaggccttagaggcataagagagaaaaatagtgaatggttggttcaattgtttaa--aaaaaagtctaagtaggaat 11414260  T
Q  252 taaaattcatt 262  Q
    ||  |||||||    
T  11414261 taggattcatt 11414271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 36878924 - 36879035
Alignment:
Q  152 gaaaatggttttgaagaaaat-aaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtagga 249  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| || |   ||||| ||||||||||||    
T  36878924 gaaaatggttttgaagaaaaagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgtt-attaaaaaaggtctaagtagga 36879022  T
Q  250 attaaaattcatt 262  Q
    ||||  |||||||    
T  36879023 attaggattcatt 36879035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 11429146 - 11429254
Alignment:
Q  153 aaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaat 251  Q
    ||||||| ||||||||| | ||||||||| || |||||||||||| | ||||||||||| |||||||| ||| || ||  ||||| ||||||||||||||    
T  11429146 aaaatggctttgaagaagagaaagaggccttagaggcataagagagaaaaatagtgaatggttggttcgattgtttaa--aaaaaagtctaagtaggaat 11429243  T
Q  252 taaaattcatt 262  Q
    ||  |||||||    
T  11429244 taggattcatt 11429254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 15854420 - 15854320
Alignment:
Q  160 ttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaattaaaattc 259  Q
    |||||||||| | ||||| |||||||||||||  ||||| || |||||||  ||||||||||||||||||   ||||||||||||| ||||||| | |||    
T  15854420 ttttgaagaagagaaagaagccgtaaaggcat--gagaaaaagtagtgaagagttggttcaattattaaaaagaaaatgtctaagttggaattagagttc 15854323  T
Q  260 att 262  Q
    |||    
T  15854322 att 15854320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 4948809 - 4948739
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | ||||||   ||||||||  ||||||||| |||||| ||||||||||||||    
T  4948809 tgagattttatttttatttggcttggaagagttttgactccttgcctacgtacccttttaagggatcaaaa 4948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 6179334 - 6179264
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||| ||| | ||||||   ||||||||  ||||||||| |||||| ||||||||||||||    
T  6179334 tgagattttattttaatttggcttggaagagttttgactccttgcctacgtacccttttaagggatcaaaa 6179264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 6222777 - 6222847
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  6222777 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 6222847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 11414027 - 11414097
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  11414027 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 11414097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 11429010 - 11429080
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  11429010 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 11429080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 30308851 - 30308781
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  30308851 tgagatcttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 30308781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 36878794 - 36878864
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  36878794 tgagatcttatttttatttggcttggaggagttttgactcattgcctacgtacccttttaagggatcaaaa 36878864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 13832721 - 13832653
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  13832721 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 13832653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 13840751 - 13840683
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  13840751 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 13840683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 5e-71; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 15018495 - 15018250
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa- 116  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  15018495 gtgtatgagatttcatttt-attggactttgagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaag 15018397  T
Q  117 aataattagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttg 215  Q
     ||  || | ||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||||||||    
T  15018396 tattttttgcgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagaggaaaagatagtgaattgttg 15018298  T
Q  216 gttcaattattaaaggaaaaa-tgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||| | ||||| ||||||||||| |||||| |||||||    
T  15018297 gttcaattattaacgaaaaaagtgtctaagtagaaattaagattcatt 15018250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 23 - 253
Target Start/End: Original strand, 28503495 - 28503723
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    |    
T  28503495 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatattt 28503593  T
Q  123 tagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaa 221  Q
    | ||||||| ||||||||||||||||||  ||||||||||| |||||   ||||||||||||||||||| ||||||| |||| |||||| ||||||||||    
T  28503594 ttgtgtgtttcaattgattttaagttttgaaaaatggttttaaagaagggaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttcaa 28503693  T
Q  222 ttattaaaggaaaaatgtctaagtaggaatta 253  Q
    ||||||||  ||||| |||||||| |||||||    
T  28503694 ttattaaa--aaaaaagtctaagttggaatta 28503723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 11342198 - 11342450
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||    
T  11342198 gtgtatgagatttcatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcataattccatgtagttctctctcaaaaa 11342296  T
Q  118 ataattagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttg 215  Q
    ||  ||  ||||| |   |||||||||||| |||||||||||||||||||||| | || |||||||||||||||| ||| |||| |||||||||| ||||    
T  11342297 atggtttttgtgtgtttgattgattttaag-ttttgaaaatggttttgaagaagagaaggaggccgtaaaggcatgagacaagacaatagtgaatggttg 11342395  T
Q  216 gttcaattattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||| |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  11342396 gttcgattattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 11342450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 21965945 - 21965698
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||  |    
T  21965945 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 21965847  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   |||||||||||| ||||| |||||||||||||||| | || |||||||||||||||| |||  ||| |||||||||| |||||||||    
T  21965846 ttttgtgtgtttgattgattttaag-ttttgcaaatggttttgaagaagagaaggaggccgtaaaggcatgagacgagacaatagtgaatggttggttca 21965748  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  21965747 attattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 21965698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 22070456 - 22070703
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||  |    
T  22070456 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 22070554  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   |||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||| |||  ||| |||||||||| |||||||||    
T  22070555 ttttgtgtgtttgattgattttaag-ttttgcaaatggttttgaagaagagaaagaggccgtaaaggcatgagacgagacaatagtgaatggttggttca 22070653  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||| ||||||||||    
T  22070654 attattaaagaaagagtgtctaagtagaaattaagattccttgaagtttt 22070703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 16254005 - 16254199
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  16254005 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttttttgtgtgt 16254103  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaatt 223  Q
    |    |||||||||| |||||    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| |||||||||||||    
T  16254104 t-tggttgattttaattttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaaggaaatggtgaa-tgttggttcaatt 16254199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 253
Target Start/End: Original strand, 5516082 - 5516303
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  5516082 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgctttttgtgtgtt 5516180  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
       |||||||| |||||||    ||||||||||||||||||||  |||||||| ||||||||||||||||| |||| |||||| |||||| ||||| ||     
T  5516181 tggttgatttt-agtttttgttggaaaatggttttgaagaaaaggaagaggccttaaaggcataagagaagaaaatggtgaatggttggtccaattgtt- 5516278  T
Q  228 aaggaaaaatgtctaagtaggaatta 253  Q
     |  ||||| ||||||||||||||||    
T  5516279 -attaaaaaagtctaagtaggaatta 5516303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 21336908 - 21337139
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattag-tgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | |||||||||||  |  ||||||||  ||   ||||||     
T  21336908 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttcattctcaaaaaatgtttttatgtgttt 21337006  T
Q  133 caattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggttcaattattaa 228  Q
       |||||||||| ||||    ||||||||||||| |||| | ||||||||| ||||||||||||||||||| || |||||| |||||||||||| |||     
T  21337007 gg-ttgattttaatttttgttggaaaatggttttggagaagagaaagaggccttaaaggcataagagaagaacatggtgaatggttggttcaattgttat 21337105  T
Q  229 aggaaaaatgtctaagtaggaattaaaattcatt 262  Q
       ||||| ||||||||||||||||  |||||||    
T  21337106 taaaaaaaagtctaagtaggaattaggattcatt 21337139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 21376869 - 21377100
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattag-tgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||| | |||||||||||  |  ||||||||  ||   ||||||     
T  21376869 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatcaaact-ccatgtagttcattctcaaaaaatgtttttatgtgttt 21376967  T
Q  133 caattgattttaagttttt---gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggttcaattattaa 228  Q
       |||||||||| ||||    ||||||||||||| |||| | ||||||||| ||||||||||||||||||| || |||||| |||||||||||| |||     
T  21376968 gg-ttgattttaatttttgttggaaaatggttttggagaagagaaagaggccttaaaggcataagagaagaacatggtgaatggttggttcaattgttat 21377066  T
Q  229 aggaaaaatgtctaagtaggaattaaaattcatt 262  Q
       ||||| ||||||||||||||||  |||||||    
T  21377067 taaaaaaaagtctaagtaggaattaggattcatt 21377100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 33272076 - 33271886
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||  |  |||||||| |||  | ||||      
T  33272076 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttcattctcaaaaaat-atttttttgtt-t 33271980  T
Q  134 aattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
      |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  33271979 ggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 33271886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 33242732 - 33242542
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||  |  ||||||||  ||  | ||||      
T  33242732 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttcattctcaaaaaat-gtttttttgtt-t 33242636  T
Q  134 aattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
      |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  33242635 ggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 33242542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 2126552 - 2126668
Alignment:
Q  147 tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagt 245  Q
    |||| |||||||||||||||||| |  |||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||| |  ||||| ||||||||    
T  2126552 ttttggaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgttataaaaaaaaagtctaagt 2126651  T
Q  246 aggaattaaaattcatt 262  Q
    || |||||  |||||||    
T  2126652 agaaattaggattcatt 2126668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 2141709 - 2141825
Alignment:
Q  147 tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagt 245  Q
    |||| |||||||||||||||||| |  |||||||| ||||||||||||||| | |||| |||||| |||||||||||| ||| |  ||||| ||||||||    
T  2141709 ttttggaaaatggttttgaagaagaggaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgttataaaaaaaaagtctaagt 2141808  T
Q  246 aggaattaaaattcatt 262  Q
    || |||||  |||||||    
T  2141809 agaaattaggattcatt 2141825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 15324764 - 15324653
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    |||||||||||| ||||| | ||||||||| ||||||||||||||||||| || |||||| ||||||||||||  ||    ||||| |||||||||||||    
T  15324764 gaaaatggttttcaagaagagaaagaggccttaaaggcataagagaagaacatggtgaatggttggttcaattgatattaaaaaaaagtctaagtaggaa 15324665  T
Q  251 ttaaaattcatt 262  Q
    |||  |||||||    
T  15324664 ttaggattcatt 15324653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 15505133 - 15505022
Alignment:
Q  152 gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaa-atagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaa 250  Q
    |||||||||||| ||||| | ||||||||| ||||||||||||||||||| || |||||| ||||||||||||  ||    ||||| |||||||||||||    
T  15505133 gaaaatggttttcaagaagagaaagaggccttaaaggcataagagaagaacatggtgaatggttggttcaattgatattaaaaaaaagtctaagtaggaa 15505034  T
Q  251 ttaaaattcatt 262  Q
    |||  |||||||    
T  15505033 ttaggattcatt 15505022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 28263277 - 28263169
Alignment:
Q  153 aaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaat 251  Q
    ||||||| ||||||||| | ||||| ||| || |||||||||||| | ||||||||||| |||||||||||| || ||  ||||| ||||||||||||||    
T  28263277 aaaatggctttgaagaagagaaagatgccttagaggcataagagagaaaaatagtgaatggttggttcaattgtttaa--aaaaaagtctaagtaggaat 28263180  T
Q  252 taaaattcatt 262  Q
    ||  |||||||    
T  28263179 taggattcatt 28263169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 14025036 - 14025121
Alignment:
Q  160 ttttgaagaaaataaagaggccgtaaaggcataagagaagaaatag-tgaattgttggttcaattattaaaggaaaaatgtctaagta 246  Q
    |||||||||| | ||||||||| ||||||||| |||||  ||| || |||||||||||||||||| ||||||| ||||||||||||||    
T  14025036 ttttgaagaatagaaagaggccttaaaggcatgagagagaaaaaaggtgaattgttggttcaatt-ttaaagg-aaaatgtctaagta 14025121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 14359125 - 14359195
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||| ||||||||||| | |||||||  ||||||||   |||||||| |||||| ||||||||||||||    
T  14359125 tgagatcttatttttatttggcttggaggagttttgactgattgcctacgtacccttttaagggatcaaaa 14359195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 15210860 - 15210790
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  15210860 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 15210790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 18801539 - 18801469
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  18801539 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 18801469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 28263413 - 28263343
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaa 93  Q
    |||||||||||||||||| | |||||||  ||||| ||   |||||||| |||||| ||||||||||||||    
T  28263413 tgagattttatttttatttggcttggaggagttttaactcattgcctacgtacccttttaagggatcaaaa 28263343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 30939498 - 30939430
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  30939498 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 30939430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 39836405 - 39836473
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  39836405 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 39836473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 39844447 - 39844515
Alignment:
Q  136 ttgattttaag-tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaata 204  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||| |||||    
T  39844447 ttgattttaagatttttgaaaatgggttttaagaaaagaaagaggcc-tcaaggcatgagagaaaaaata 39844515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 43 - 262
Target Start/End: Original strand, 15002 - 15223
Alignment:
Q  43 acttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataattagtgtgttccaattgatt 141  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  || ||||||| |||||||||    
T  15002 acttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctcttccaaaagtatttttggtgtgtttcaattgatt 15101  T
Q  142 ttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataaga-gaagaaatagtgaattgttggttcaattattaaaggaaaaa-tgt 239  Q
    || ||||||||||||||||||||||||| | ||||||| ||||||||||| ||| ||| | ||||||||||||||||||||||||||| | ||||| |||    
T  15102 tt-agtttttgaaaatggttttgaagaagagaaagaggacgtaaaggcatgagaggaaaagatagtgaattgttggttcaattattaacgaaaaaagtgt 15200  T
Q  240 ctaagtaggaattaaaattcatt 262  Q
    |||||||| |||||| |||||||    
T  15201 ctaagtagaaattaagattcatt 15223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 126; Significance: 5e-65; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 8797 - 8550
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||  |    
T  8797 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 8699  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   |||||||||||| ||||| |||||||||||||||| | || |||||||||||||||| |||  ||| |||||||||| |||||||||    
T  8698 ttttgtgtgtttgattgattttaag-ttttgcaaatggttttgaagaagagaaggaggccgtaaaggcatgagacgagacaatagtgaatggttggttca 8600  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || | ||||||||||| |||||| |||||||||||||||    
T  8599 attattaaagaaagagtgtctaagtagaaattaagattcattgaagtttt 8550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 2675 - 2604
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaatt 95  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2675 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatt 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 7516 - 7282
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    |    
T  7516 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaatgttt 7418  T
Q  123 tagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaat 222  Q
    | ||||||| ||||||||||| |||||||||||||||||||||||||   ||||| |||||||||||||  ||||| |||| |||| | |||||||||||    
T  7417 ttgtgtgtttcaattgatttt-agtttttgaaaatggttttgaagaagggaaagaagccgtaaaggcat--gagaaaaaatggtgagtggttggttcaat 7321  T
Q  223 tattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||| |||||  |||||||| ||||||||| ||||||    
T  7320 tattaaa-gaaaagagtctaagttggaattaaagttcatt 7282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 7082 - 7287
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataa 121  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||| |||      
T  7082 tgagattttatttt-agtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaaatccatgcagttctctttcaaaagaatgt 7180  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttca 220  Q
    || ||||||| |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||| |||| |||||| |||||||||    
T  7181 tttgtgtgtttcaattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttca 7280  T
Q  221 attatta 227  Q
    |||||||    
T  7281 attatta 7287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 77453 - 77248
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaa-aataa 121  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||| |||      
T  77453 tgagattttatttt-agtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaaatccatgcagttctctttcaaaagaatgt 77355  T
Q  122 ttagtgtgttccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttca 220  Q
    || ||||||| |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||| |||| |||||| |||||||||    
T  77354 tttgtgtgtttcaattgattttaagttttggaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgaatggttggttca 77255  T
Q  221 attatta 227  Q
    |||||||    
T  77254 attatta 77248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 17478 - 17230
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||  |    
T  17478 tgagattttatttt-attggacttgaagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaattgt 17380  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   ||||||||||||||||  ||||||||||| ||||| | || |||||||||||||||| ||| || | |||||||||| |||||||||    
T  17379 ttttgtgtgtttgattgattttaagttttgaaaaatggttttaaagaagagaaggaggccgtaaaggcatgagacaaaacaatagtgaatggttggttca 17280  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || |  ||||||||||||||||| |||||||| ||||||    
T  17279 attattaaagaaagagcgtctaagtaggaattaagattcattggagtttt 17230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 23 - 270
Target Start/End: Complemental strand, 31722 - 31474
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||  |    
T  31722 tgagattttatttt-attggacttcgagaggttttgacctcttgcctacatacccttttaaggaatcaaaattccatgtagttctctctcaaaaaattgt 31624  T
Q  123 tagtgtgt-tccaattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaaga-aatagtgaattgttggttca 220  Q
    |  ||||| |   ||||||||||||||||  ||||||||||| ||||| | || |||||||||||||||| ||| || | |||||||||| |||||||||    
T  31623 ttttgtgtgtttgattgattttaagttttgaaaaatggttttaaagaagagaaggaggccgtaaaggcatgagacaaaacaatagtgaatggttggttca 31524  T
Q  221 attattaaaggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
    |||||||||| || |  ||||||||||||||||| |||||||| ||||||    
T  31523 attattaaagaaagagcgtctaagtaggaattaagattcattggagtttt 31474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 262
Target Start/End: Complemental strand, 99623 - 99379
Alignment:
Q  26 gattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa-taatta 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |  ||     
T  99623 gattttatttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaagtttttg 99524  T
Q  125 gtgtgttccaattgatttta---agtttt---tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagag--aagaaatagtgaattgttgg 216  Q
    |||||||   ||||||||||   ||||||   ||||||||||||||||||| | ||||||||||||||||||| ||||  || |||| |||||| |||||    
T  99523 gtgtgtt-tgattgattttaattagttttttctgaaaatggttttgaagaagagaaagaggccgtaaaggcatgagagaaaaaaaatggtgaatggttgg 99425  T
Q  217 ttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||||||    ||||| |||||||| ||||||| | ||||||    
T  99424 ttcaattattattaaaaaaaggtctaagttggaattagagttcatt 99379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 262
Target Start/End: Complemental strand, 180546 - 180302
Alignment:
Q  26 gattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa-taatta 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |  ||     
T  180546 gattttatttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaagtttttg 180447  T
Q  125 gtgtgttccaattgatttta---ag---tttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagag--aagaaatagtgaattgttgg 216  Q
    |||||||   ||||||||||   ||   ||||||||||||||||||||||  | ||||||||||||||||||| ||||  || |||| |||||| |||||    
T  180446 gtgtgtt-tgattgattttatttagttttttttgaaaatggttttgaagatgagaaagaggccgtaaaggcatgagagaaaaaaaatggtgaatggttgg 180348  T
Q  217 ttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |||||||||||    ||||| |||||||| ||||||| | ||||||    
T  180347 ttcaattattattataaaaaggtctaagttggaattagagttcatt 180302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 23182 - 22940
Alignment:
Q  18 gtgtatgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||  ||||||    
T  23182 gtgtttgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatc-aaactccatgtagttctctctcaaaaa 23085  T
Q  118 ataattagtgtgttccaattgattttaag--tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgtt 214  Q
        || ||||||| ||||||||||||||  ||||||||||| |||||||||||||  ||||| |||||||||||||  ||||| |||| |||| | |||    
T  23084 tgtttttgtgtgtttcaattgattttaagtttttttgaaaatgggttttgaagaaaggaaagaagccgtaaaggcat--gagaaaaaatggtgagtggtt 22987  T
Q  215 ggttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||||||| |||||  |||||||| ||||||||| ||||||    
T  22986 ggttcaattattaaa-gaaaagagtctaagttggaattaaagttcatt 22940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 5324 - 5516
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   || |||||||     
T  5324 ttttagtggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtttttgtgtgttt 5423  T
Q  133 caattgattttaagtttt-tgaaaatggttttgaagaaaataaagaggccgtaaaggcataagag-aagaaatagtgaattgttggttcaatt 223  Q
    ||||||||||||| ||||   ||||||||||||||||| | ||||||||| ||||||||| |||| || |||| |||||| ||||||||||||    
T  5424 caattgattttaaattttgaaaaaatggttttgaagaagagaaagaggccttaaaggcatgagagaaaaaaatggtgaatggttggttcaatt 5516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 3209 - 2982
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||   || |||||||     
T  3209 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaatttcatgtagttctctttcaaaaaatgtttttgtgtgtt- 3111  T
Q  133 caattgattttaagtttttg-aaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaagg 231  Q
      ||||||||||  |||||| ||||||||||||||||| | ||||| ||||||||||| |  ||||| | || |||||| ||||||||||||||||        
T  3110 tgattgattttagttttttgaaaaatggttttgaagaagagaaagaagccgtaaaggcgt--gagaaaacatggtgaatggttggttcaattattattaa 3013  T
Q  232 aaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||| |||||||| ||||||| | ||||||    
T  3012 aaaaaggtctaagttggaattagagttcatt 2982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 126450 - 126212
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||  ||||||    |    
T  126450 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaagggatc-aaactccatgtagttctctctcaaaaatgttt 126353  T
Q  123 tagtgtgttccaattgattttaag---tttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggtt 218  Q
    | |||| || ||||||||||||||   ||||| ||||| |||||||||||||  ||||| |||||||||||||  ||||| |||| |||| | |||||||    
T  126352 ttgtgtttttcaattgattttaagtttttttttaaaatgggttttgaagaaaggaaagaagccgtaaaggcat--gagaaaaaatggtgagtggttggtt 126255  T
Q  219 caattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||||||||||| |||||  ||||||||  |||||||| ||||||    
T  126254 caattattaaa-gaaaagagtctaagtttgaattaaagttcatt 126212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 26028 - 26251
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgttcc 133  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| |||||  |  || ||||||| |    
T  26028 ttttattggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaatgt-ttttgtgtgtttc 26125  T
Q  134 aattgattttaagtttttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattattaaagga 232  Q
    |||||||||||||||||  ||||| | ||||||||| | ||||| |||||||||||||  |||||| |||| |||||| |||||||||||| ||  |  |    
T  26126 aattgattttaagttttgaaaaataggtttgaagaagagaaagaagccgtaaaggcat--gagaagaaaatggtgaatggttggttcaattgtt--atta 26221  T
Q  233 aaaatgtctaagtaggaattaaaattcatt 262  Q
    |||| ||||||||||||||||  |||||||    
T  26222 aaaaagtctaagtaggaattaggattcatt 26251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 8596 - 8478
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   || |||||||     
T  8596 ttttattggacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaaatgtttttgtgtgttt 8497  T
Q  133 caattgattttaagttttt 151  Q
    | |||||||||||||||||    
T  8496 cgattgattttaagttttt 8478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 3337 - 3244
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa 117  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  3337 tgagattttatttt-attgaacttggagaggttttgacctcttgcctacatacccttttaagggatcaaaattccatgtagttctctttcaaaaa 3244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 253
Target Start/End: Complemental strand, 17830 - 17636
Alignment:
Q  60 cctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataatta---gtgtgttccaattgattttaagtttttg-aaa 155  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||  ||    |||||||  | |||||||||  |||||| |||    
T  17830 cctcttgcctacatacccttttaagggatcaaaatgccatgtagttctctttcaaaaaatgtttttttgtgtgtttga-ttgattttagttttttggaaa 17732  T
Q  156 atggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaatta 253  Q
    |||||||||||||| | ||||| ||||||||||||| ||| || || |||||||  |||||||||||||||||| | ||||||||||||| |||||||    
T  17731 atggttttgaagaagagaaagaagccgtaaaggcatgaga-aaaaagtagtgaagagttggttcaattattaaaag-aaaatgtctaagttggaatta 17636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 7384 - 7289
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat 119  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  7384 tgagattttatttt-atcggacttggagaggttttgatctcttgcctacatacccttttaagggatcaaaattccatgtagttctctctcaaaaaat 7289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 270
Target Start/End: Complemental strand, 12967 - 12730
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat-aattagtgtgttc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||   || |||||||     
T  12967 ttttattggacttggagaggttttgacctcatgcctacatacccttttaagggatc-aaactccatgtagttctctttcaaaaaatgtttttgtgtgtt- 12870  T
Q  133 caattgattttaagtt---tttgaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaa 229  Q
      |||||||||   ||   || |||||||||||||||||| | ||||| | ||||||||||| ||| || ||  ||||||  |||||||| ||| |||||    
T  12869 tgattgatttttttttttgttggaaaatggttttgaagaagagaaagaagtcgtaaaggcatgagaaaaaaagcagtgaagagttggttcgatttttaaa 12770  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcattgaagtttt 270  Q
     | |||| |||||||||| | ||||| |||||||| |||||    
T  12769 ag-aaaaggtctaagtagaagttaaagttcattgaggtttt 12730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 13089 - 13281
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaaataattagtgtgttc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||| || ||||  |  || |||||||     
T  13089 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaggtttttggtgtgtt- 13186  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaa-gaaatagtgaattgttggttcaatt 223  Q
       |||||||||| |||||    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| |||||||||||||    
T  13187 tggttgattttaattttttgttggaaaatggttttgaagaaaagaaagaggccttaaaggcataagagaaggaaatggtgaa-tgttggttcaatt 13281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 67; Significance: 8e-30; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 11142 - 11335
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  11142 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgttttttgtgtgtt 11240  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatt 223  Q
       |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  11241 tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagaagaaaatggtgaatggttggttcaatt 11335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 262
Target Start/End: Complemental strand, 25684 - 25451
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaa----ataattagtgtg 129  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| ||||||     |  || |||||    
T  25684 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaatacttttttttgtgtg 25586  T
Q  130 ttccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaatta 224  Q
    ||    |||||||| |||||||    |||||||||||||||||| | ||||||||| | ||||||||||||||| |||| |||||| ||||||||||||     
T  25585 tt-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttgaaggcataagagaagaaaatggtgaatggttggttcaattg 25488  T
Q  225 ttaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    || |   ||||| ||||||||||||||||  |||||||    
T  25487 tt-atttaaaaaagtctaagtaggaattaggattcatt 25451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 51360 - 51555
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa----taattagtgtg 129  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||    |  || |||||    
T  51360 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaaatgtttttttgtgtg 51458  T
Q  130 ttccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    ||    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  51459 tt-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 51555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 271
Target Start/End: Complemental strand, 17919 - 17681
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctct-tccaaaaaataattagtg-tgtt 131  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| || ||||  |  || ||| |||     
T  17919 ttttattggacttggaaaggttttgacctcttgcctacatacccttttaagggatc-aaactccatgtagttctctctcaaaaatgtttttggtgatgtg 17821  T
Q  132 ccaattgattttaagtttttgaaaat-ggttttgaagaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaa-ttattaaa 229  Q
      | ||||||||||| |||||||||| |||||||||||||  ||||| |||||||||||||   |||| |||| |||| | |||||||||| ||||||||    
T  17820 tgatttgattttaag-ttttgaaaatgggttttgaagaaaggaaagaagccgtaaaggcatggaagaaaaaatggtgagtggttggttcaatttattaaa 17722  T
Q  230 ggaaaaatgtctaagtaggaattaaaattcattgaagttttt 271  Q
     |||||  |||||||| ||| |||| |||||||  |||||||    
T  17721 -gaaaagagtctaagttggatttaacattcatttgagttttt 17681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 20189 - 20383
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||| |||||||   |  || ||||||    
T  20189 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctttcaaaaaatgtttttttgtgtgt 20287  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaatt 223  Q
    |    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| ||||||||||||    
T  20288 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaatt 20383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 262
Target Start/End: Original strand, 72460 - 72691
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa---taattagtgtgt 130  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  |||||||   |  || ||||||    
T  72460 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatttttttttgtgtgt 72558  T
Q  131 tccaattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcataagaga-agaaatagtgaattgttggttcaattat 225  Q
    |    |||||||| |||||||    |||||||||||||||||| | ||||||||| ||||||||||||||| | |||| |||||| |||||||||||| |    
T  72559 t-tggttgatttt-agtttttgttggaaaatggttttgaagaagagaaagaggccttaaaggcataagagagaaaaatggtgaatggttggttcaattgt 72656  T
Q  226 taaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    |  |  ||||| ||||||||||||||||  |||||||    
T  72657 t--attaaaaaagtctaagtaggaattaggattcatt 72691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2097 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold2097
Description:

Target: scaffold2097; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 307 - 112
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaataattagtgtgt-tc 132  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||  ||  ||||| |     
T  307 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaatgtttcttgtgtgtt 209  T
Q  133 caattgattttaagttttt----gaaaatggttttgaagaaaataaagaggccgtaaaggcata--agagaagaaatagtgaattgttggttcaatt 223  Q
       |||||||||  |||||    |||||||||||||||||| |  |||||||| ||||||||||  |||||| |||| |||||| ||||||||||||    
T  208 tggttgattttagttttttgttggaaaatggttttgaagaagaggaagaggccataaaggcataagagagaaaaaatggtgaatggttggttcaatt 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 72 - 262
Target Start/End: Complemental strand, 23028 - 22836
Alignment:
Q  72 ataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgttccaattgattttaagttttt---gaaaatggttttgaa 166  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||   |  || | |||||  | |||||||||  |||||   |||||||||||||||    
T  23028 atacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttttgcgtgtttga-ttgattttagttttttttagaaaatggttttgaa 22930  T
Q  167 gaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||| | ||||| |||||||||||||  ||||| || |||||||  |||| |||||||||||||   ||||||||||||| ||||||| | ||||||    
T  22929 gaagagaaagaagccgtaaaggcat--gagaaaaagtagtgaagagttgtttcaattattaaaaagaaaatgtctaagttggaattagagttcatt 22836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 26671 - 26629
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacatacc 76  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  26671 ttttattggacttggagaagttttgacctcttgcctacatacc 26629  T

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Target: scaffold0078 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 72 - 262
Target Start/End: Original strand, 49816 - 50008
Alignment:
Q  72 ataccctcttaagggatcaaaattccatgtagttctcttccaaaaaa--taattagtgtgttccaattgattttaagttttt---gaaaatggttttgaa 166  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||   |  || | |||||  | |||||||||  |||||   |||||||||||||||    
T  49816 atacccttttaagggatcaaaattccatgtagttctctttcaaaaatgtttttttgcgtgtttga-ttgattttagttttttttagaaaatggttttgaa 49914  T
Q  167 gaaaataaagaggccgtaaaggcataagagaagaaatagtgaattgttggttcaattattaaaggaaaaatgtctaagtaggaattaaaattcatt 262  Q
    ||| | ||||| |||||||||||||  ||||| || |||||||  |||| |||||||||||||   ||||||||||||| ||||||| | ||||||    
T  49915 gaagagaaagaagccgtaaaggcat--gagaaaaagtagtgaagagttgtttcaattattaaaaagaaaatgtctaagttggaattagagttcatt 50008  T

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Target: scaffold0078; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 46173 - 46215
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacatacc 76  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  46173 ttttattggacttggagaagttttgacctcttgcctacatacc 46215  T

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Target: scaffold0170 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 3766 - 3682
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttctcttccaaaaaat 119  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||||  ||||||||    
T  3766 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttctctctcaaaaaat 3682  T

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Target: scaffold0074 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 11839 - 11899
Alignment:
Q  23 tgagattttatttttattggacttggagaggttttgacctcttgcctacataccctcttaag 84  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11839 tgagattttatttt-attggacttggagaggttttgacctcttgcctacatacccttttaag 11899  T

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Target: scaffold0643 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 1754 - 1826
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttct 107  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||    
T  1754 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttct 1826  T

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Target: scaffold0601 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 6803 - 6875
Alignment:
Q  34 ttttattggacttggagaggttttgacctcttgcctacataccctcttaagggatcaaaattccatgtagttct 107  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||| |||||||||||||    
T  6803 ttttagtggacttggagaggttttgacctcatgcctacatacccatttaagggatc-aaactccatgtagttct 6875  T

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Target: scaffold0134 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 23695 - 23613
Alignment:
Q  147 tttttgaaaatgg-ttttgaagaaaataaagaggccgtaaaggcataagagaag-aaatagtgaattgttggttcaattatta 227  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||| ||||||| |||| |||| | ||||||||||||||||    
T  23695 tttttgaaaatgggttttgaagaagagaaagaggccgtaaaggcatgagagaagaaaatggtgagtggttggttcaattatta 23613  T

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Target: scaffold0099 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 52724 - 52802
Alignment:
Q  34 ttttattggacttggagaggtttt-gacctcttgccta-cataccctcttaagggatcaaaattccatgtagttctctt 110  Q
    ||||| |||||||||||||||||| |||||| |||||| |||||||  |||||||||||||| ||||||||||||||||    
T  52724 ttttagtggacttggagaggtttttgacctcatgcctaacatacccatttaagggatcaaaactccatgtagttctctt 52802  T

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