View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2326_low_14 (Length: 309)
Name: NF2326_low_14
Description: NF2326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2326_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 10 - 290
Target Start/End: Complemental strand, 16507422 - 16507142
Alignment:
| Q |
10 |
acatcatcataatcacttcctctaaaatcaaacggcaacaacaacggttcaaagaaatcatcgccacaacactccgttacaacagctttggtgaatttgc |
109 |
Q |
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| T |
16507422 |
acatcatcataatcacttcctctaaaatcaaacggcaacaacaacggttcaaagaaatcatcgccacaacactccgttacaacagctttggtgaatttgc |
16507323 |
T |
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| Q |
110 |
acggcggtggtagattttttaggttacgaaacaggttcggatacgctttggagagtaactcagcggcttcgttgtaggtttggttaggtctctttcgatt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16507322 |
acggcggtggtagattttttaggttacgaaacaggttcggatacgctttggagagtaactcagcggcttcgttgtaggtttggttaggtctctttcgatt |
16507223 |
T |
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| Q |
210 |
ggttcggggtcttttggttcggatagcgctttgggttatgttattgctaggttcggagattgttaatgttgatgaaggtga |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16507222 |
ggttcggggtcttttggttcggatagcgctttgggttatgttattgctaggttcggagattgttaatgttgatgaaggtga |
16507142 |
T |
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