View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2326_low_17 (Length: 271)
Name: NF2326_low_17
Description: NF2326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2326_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 54218013 - 54217777
Alignment:
| Q |
16 |
tcacgatcccctaatatgatgaatcaaagtttccttgtcgcatattgatggtgagtgttttaccccacaatggttctcttctttggttgctacgttgttc |
115 |
Q |
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| T |
54218013 |
tcacgatcccctaatatgatgaatcaaagtttccttgtcgcatattgatggtgagtgttttaccccacaatggttctcttctttggttgctacgttgttc |
54217914 |
T |
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| Q |
116 |
ggtggtgttatttcctacatagtttgttgtgtaattaacatatccgtttgtcgaacccataaacacgttagatcttggttaaatttttgactaacttgaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
54217913 |
ggtggtgttatttcctacatagtttgttgtgtaattaacatatccgtttgtcgaactcataaacacgttagatcttggttaaattttttactaacttgaa |
54217814 |
T |
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| Q |
216 |
ttccaagtaaattcaaaatgaccttgacctgctatac |
252 |
Q |
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|||||||||||||||||||||||||||||| |||||| |
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| T |
54217813 |
ttccaagtaaattcaaaatgaccttgacctactatac |
54217777 |
T |
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