View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2327_high_21 (Length: 300)
Name: NF2327_high_21
Description: NF2327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2327_high_21 |
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Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 43710072 - 43710349
Alignment:
| Q |
17 |
aaaaaggttttagtttgttaacttattattaacatttaaaccatttttgtatgatatccttagcgtgttcttgactttattaaacactaaatattgatat |
116 |
Q |
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| T |
43710072 |
aaaaaggttttagtttgttaacttattattaacatttaaaccatttttgtatgatatccttagcgtgttattgactttattaaacactaa-tattgatat |
43710170 |
T |
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| Q |
117 |
atcaatatgtggatgaaaattgaaaacgtctcaatgcatgtcattttgactgtacaatctttattttatcatcattcaaacaaagattagttttctgtcn |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
43710171 |
atcaatatgtggatgaaaattgaaaacgtctcaatgcatgtcattttgactgtacaatctttattttatcaacattcaaacaaagattagttttctgtca |
43710270 |
T |
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| Q |
217 |
nnnnnnnnnnnnnntctctcatgacaaaaatcaattattgaagctatttcttcacctttttctccacaaaattcaatttct |
297 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
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| T |
43710271 |
aaaaaaaaaaaaa--ctctcatgacaaaaatcaattattgaggctatttcttcacctttttctccacaaaaatcaatttct |
43710349 |
T |
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