View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2327_low_29 (Length: 250)
Name: NF2327_low_29
Description: NF2327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2327_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 43078066 - 43078303
Alignment:
| Q |
1 |
attctcattctcatcttcttatgtattctcttaaattaattaaa-tatgtttgctaaaatcaataacctggttgctttagtaccaacttttccaagtgac |
99 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
43078066 |
attctcattctcatcttcttatgtattctcttatattaattaaaatatgtttgctaaaatcaataacctggttgctttactaccaacttttccaagtgac |
43078165 |
T |
|
| Q |
100 |
atacgcacaaactttgagactcagcagcatccatcatcatactagaaatgtgagtaaaaaatgtacccaaaaataaaag--gtgtgtaagaatctcattt |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
43078166 |
atacgcacaaactttgagactcagcagcatccatcatcatactagaaatgtgagtaaaaaatgtacccaaaaataaaaggtgtgtgtaagaatctcattt |
43078265 |
T |
|
| Q |
198 |
attgatggagtaagtaaaagactatatagtttaattag |
235 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
43078266 |
attgatggagtaagtaaaagactatatagtttaattag |
43078303 |
T |
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