View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2329_high_1 (Length: 866)

Name: NF2329_high_1
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2329_high_1
NF2329_high_1
[»] chr5 (62 HSPs)
chr5 (15-453)||(32305532-32305991)
chr5 (560-847)||(32305134-32305422)
chr5 (704-847)||(32365548-32365691)
chr5 (664-847)||(32318454-32318645)
chr5 (29-176)||(10721798-10721945)
chr5 (29-176)||(16752955-16753104)
chr5 (29-175)||(28494857-28495003)
chr5 (27-175)||(41834443-41834592)
chr5 (13-163)||(16752607-16752757)
chr5 (29-163)||(27307086-27307220)
chr5 (13-162)||(22651371-22651521)
chr5 (13-163)||(27307428-27307581)
chr5 (13-93)||(28495211-28495291)
chr5 (61-162)||(17260352-17260454)
chr5 (13-175)||(4966829-4966991)
chr5 (15-131)||(28289741-28289858)
chr5 (40-163)||(13557017-13557140)
chr5 (29-163)||(21371082-21371217)
chr5 (30-103)||(164276-164350)
chr5 (29-90)||(14215340-14215402)
chr5 (29-131)||(18150109-18150213)
chr5 (29-125)||(28290030-28290127)
chr5 (55-131)||(20266327-20266404)
chr5 (29-93)||(39083455-39083520)
chr5 (29-103)||(2864839-2864915)
chr5 (29-103)||(5819014-5819090)
chr5 (33-175)||(38900657-38900800)
chr5 (13-103)||(8647523-8647614)
chr5 (13-103)||(19359221-19359312)
chr5 (13-59)||(15709100-15709146)
chr5 (27-84)||(16018969-16019027)
chr5 (27-103)||(25000471-25000549)
chr5 (13-175)||(32697593-32697759)
chr5 (13-93)||(19291452-19291533)
chr5 (29-89)||(29454840-29454901)
chr5 (29-175)||(4967155-4967304)
chr5 (30-93)||(8419008-8419072)
chr5 (29-103)||(18183055-18183131)
chr5 (13-103)||(164560-164651)
chr5 (13-84)||(2865124-2865195)
chr5 (13-103)||(5819298-5819389)
chr5 (13-48)||(8461071-8461106)
chr5 (13-103)||(18183338-18183429)
chr5 (29-90)||(15709353-15709415)
chr5 (29-78)||(24331672-24331722)
chr5 (13-59)||(24331929-24331975)
chr5 (29-89)||(8461315-8461376)
chr5 (29-93)||(14340793-14340858)
chr5 (13-90)||(24362205-24362282)
chr5 (94-175)||(28595193-28595274)
chr5 (29-103)||(8647822-8647898)
chr5 (13-175)||(15029679-15029842)
chr5 (29-84)||(19359520-19359576)
chr5 (111-175)||(20260938-20261002)
chr5 (111-163)||(22651780-22651832)
chr5 (55-129)||(14464929-14465004)
chr5 (17-47)||(14215616-14215646)
chr5 (13-43)||(16018733-16018763)
chr5 (13-59)||(24325580-24325626)
chr5 (29-93)||(5161678-5161743)
chr5 (47-103)||(6018398-6018455)
chr5 (13-58)||(15372242-15372287)
[»] chr2 (64 HSPs)
chr2 (13-175)||(28143400-28143562)
chr2 (31-175)||(31797166-31797310)
chr2 (24-175)||(14942225-14942379)
chr2 (50-175)||(2190482-2190609)
chr2 (13-175)||(11540008-11540171)
chr2 (29-131)||(33920669-33920772)
chr2 (29-175)||(42192253-42192400)
chr2 (29-131)||(43160066-43160170)
chr2 (15-131)||(4355812-4355929)
chr2 (13-175)||(42192612-42192776)
chr2 (29-93)||(18450926-18450991)
chr2 (13-131)||(9330164-9330284)
chr2 (29-131)||(15550730-15550834)
chr2 (13-93)||(5560920-5561001)
chr2 (13-131)||(4808936-4809055)
chr2 (29-131)||(13399479-13399582)
chr2 (29-103)||(43058717-43058792)
chr2 (13-131)||(43216079-43216198)
chr2 (13-163)||(11539662-11539814)
chr2 (13-131)||(16175719-16175839)
chr2 (15-103)||(11090606-11090695)
chr2 (20-103)||(26538454-26538539)
chr2 (13-93)||(33920981-33921062)
chr2 (13-163)||(62982-63133)
chr2 (29-103)||(7446730-7446806)
chr2 (29-163)||(16953320-16953455)
chr2 (13-124)||(32418221-32418333)
chr2 (29-103)||(40815430-40815506)
chr2 (30-93)||(43160397-43160461)
chr2 (13-103)||(239437-239528)
chr2 (13-103)||(40027225-40027316)
chr2 (13-103)||(40815714-40815805)
chr2 (16-93)||(6949547-6949625)
chr2 (16-90)||(14432241-14432315)
chr2 (13-59)||(18451200-18451246)
chr2 (13-131)||(38008007-38008127)
chr2 (29-125)||(44219707-44219804)
chr2 (13-93)||(63328-63409)
chr2 (30-90)||(3025848-3025909)
chr2 (30-90)||(8425453-8425514)
chr2 (13-93)||(20128107-20128188)
chr2 (29-103)||(22374709-22374785)
chr2 (30-103)||(1978494-1978569)
chr2 (13-103)||(26538182-26538273)
chr2 (13-103)||(43058418-43058509)
chr2 (13-59)||(1978238-1978284)
chr2 (13-125)||(4356126-4356239)
chr2 (13-93)||(13315591-13315673)
chr2 (29-78)||(14432525-14432575)
chr2 (13-125)||(38008321-38008434)
chr2 (15-92)||(43215805-43215883)
chr2 (13-93)||(13399790-13399871)
chr2 (29-93)||(22445735-22445800)
chr2 (29-84)||(239736-239792)
chr2 (13-45)||(3025609-3025641)
chr2 (20-103)||(8425736-8425820)
chr2 (29-103)||(28616998-28617074)
chr2 (29-103)||(40027524-40027600)
chr2 (77-163)||(25336034-25336121)
chr2 (16-93)||(20127832-20127910)
chr2 (13-93)||(4809249-4809330)
chr2 (29-93)||(15551060-15551125)
chr2 (29-93)||(16953032-16953097)
chr2 (29-93)||(17061003-17061068)
[»] scaffold0007 (5 HSPs)
scaffold0007 (13-175)||(205738-205900)
scaffold0007 (24-107)||(205031-205115)
scaffold0007 (24-107)||(205461-205544)
scaffold0007 (89-175)||(210784-210870)
scaffold0007 (13-103)||(64387-64478)
[»] chr3 (92 HSPs)
chr3 (13-175)||(36701466-36701629)
chr3 (13-163)||(27200062-27200212)
chr3 (29-176)||(2323391-2323538)
chr3 (13-163)||(55192143-55192293)
chr3 (12-175)||(49407809-49407972)
chr3 (13-175)||(50900898-50901060)
chr3 (13-131)||(37847190-37847308)
chr3 (13-163)||(37075711-37075864)
chr3 (13-176)||(27199714-27199878)
chr3 (29-175)||(50900545-50900692)
chr3 (20-161)||(8874063-8874205)
chr3 (13-176)||(43222402-43222566)
chr3 (23-163)||(49408163-49408302)
chr3 (29-175)||(52237203-52237350)
chr3 (13-175)||(25534903-25535067)
chr3 (29-93)||(8873786-8873850)
chr3 (13-131)||(36701163-36701284)
chr3 (19-93)||(33412383-33412457)
chr3 (13-125)||(50662782-50662895)
chr3 (29-175)||(40839038-40839185)
chr3 (13-131)||(51828014-51828133)
chr3 (29-131)||(52236873-52236976)
chr3 (29-175)||(40275106-40275255)
chr3 (11-175)||(55389618-55389783)
chr3 (29-176)||(37076060-37076208)
chr3 (29-103)||(5137365-5137441)
chr3 (29-103)||(26837445-26837521)
chr3 (29-103)||(37727314-37727390)
chr3 (13-175)||(40275464-40275626)
chr3 (13-131)||(46013479-46013598)
chr3 (13-103)||(5137065-5137156)
chr3 (13-103)||(37727014-37727105)
chr3 (13-103)||(41046785-41046876)
chr3 (13-131)||(49720428-49720547)
chr3 (29-90)||(31778752-31778814)
chr3 (29-175)||(43222775-43222923)
chr3 (13-163)||(46013792-46013944)
chr3 (15-163)||(51472880-51473029)
chr3 (13-90)||(24300925-24301002)
chr3 (13-90)||(39555946-39556023)
chr3 (13-93)||(47431792-47431873)
chr3 (13-93)||(49951916-49951997)
chr3 (29-93)||(51828343-51828408)
chr3 (13-93)||(55389967-55390048)
chr3 (29-103)||(22424899-22424975)
chr3 (29-103)||(24300641-24300717)
chr3 (29-103)||(32535044-32535120)
chr3 (13-131)||(34105018-34105139)
chr3 (29-103)||(39555663-39555739)
chr3 (29-103)||(41047083-41047159)
chr3 (29-103)||(43973824-43973900)
chr3 (29-175)||(52375717-52375864)
chr3 (13-174)||(330206-330368)
chr3 (13-103)||(25853596-25853687)
chr3 (27-103)||(29801798-29801876)
chr3 (16-93)||(40838747-40838825)
chr3 (29-125)||(44676858-44676955)
chr3 (29-131)||(51828596-51828700)
chr3 (29-93)||(14654577-14654642)
chr3 (15-103)||(20840645-20840734)
chr3 (13-93)||(32730759-32730840)
chr3 (13-93)||(51473225-51473306)
chr3 (29-103)||(4275748-4275824)
chr3 (29-103)||(17464576-17464652)
chr3 (29-103)||(20840945-20841021)
chr3 (29-103)||(25853319-25853395)
chr3 (29-103)||(27393746-27393822)
chr3 (29-103)||(30098147-30098223)
chr3 (13-53)||(30104617-30104657)
chr3 (13-93)||(34104733-34104813)
chr3 (29-131)||(38535681-38535784)
chr3 (29-131)||(44676529-44676632)
chr3 (29-131)||(52375384-52375487)
chr3 (13-103)||(23644547-23644638)
chr3 (13-48)||(26274936-26274971)
chr3 (15-163)||(2044296-2044445)
chr3 (29-175)||(22370609-22370757)
chr3 (13-125)||(43678358-43678471)
chr3 (13-90)||(26837725-26837802)
chr3 (13-93)||(41998325-41998406)
chr3 (13-93)||(51828910-51828991)
chr3 (50-131)||(12140994-12141076)
chr3 (29-103)||(23644849-23644925)
chr3 (29-103)||(26274652-26274728)
chr3 (65-131)||(12141113-12141180)
chr3 (13-48)||(17464860-17464895)
chr3 (13-103)||(31779021-31779112)
chr3 (50-93)||(41998636-41998679)
chr3 (13-59)||(27393946-27393992)
chr3 (29-125)||(38535372-38535469)
chr3 (13-93)||(2051394-2051475)
chr3 (102-175)||(33412614-33412687)
[»] chr6 (41 HSPs)
chr6 (14-163)||(35163557-35163708)
chr6 (27-163)||(32836032-32836163)
chr6 (13-163)||(32836367-32836517)
chr6 (50-151)||(11523721-11523824)
chr6 (20-103)||(10900024-10900109)
chr6 (60-163)||(35163209-35163312)
chr6 (50-131)||(33095771-33095853)
chr6 (50-175)||(835407-835532)
chr6 (13-131)||(31073512-31073631)
chr6 (29-125)||(5114531-5114628)
chr6 (13-93)||(31573820-31573901)
chr6 (13-131)||(31574095-31574214)
chr6 (30-131)||(5120856-5120958)
chr6 (13-103)||(10900299-10900390)
chr6 (20-84)||(11276695-11276760)
chr6 (15-84)||(12935528-12935597)
chr6 (13-90)||(20741199-20741276)
chr6 (29-93)||(20741485-20741550)
chr6 (13-93)||(25472382-25472463)
chr6 (13-93)||(28636566-28636647)
chr6 (13-53)||(11445123-11445163)
chr6 (29-103)||(11445371-11445447)
chr6 (29-103)||(12935242-12935318)
chr6 (29-103)||(22219737-22219813)
chr6 (13-131)||(25468906-25469027)
chr6 (13-103)||(11276951-11277042)
chr6 (13-103)||(15828010-15828101)
chr6 (50-93)||(22534165-22534208)
chr6 (13-103)||(28472722-28472812)
chr6 (13-103)||(29859911-29860001)
chr6 (16-93)||(29891453-29891531)
chr6 (29-90)||(31470414-31470476)
chr6 (13-53)||(2322588-2322628)
chr6 (13-103)||(18257222-18257313)
chr6 (55-133)||(28636347-28636425)
chr6 (15-53)||(1149802-1149840)
chr6 (36-90)||(15827739-15827794)
chr6 (13-103)||(31470685-31470776)
chr6 (13-125)||(24640555-24640668)
chr6 (16-93)||(30251064-30251142)
chr6 (13-70)||(29891199-29891256)
[»] chr4 (78 HSPs)
chr4 (13-174)||(35193322-35193483)
chr4 (13-173)||(17503989-17504149)
chr4 (13-163)||(40160119-40160269)
chr4 (29-175)||(229545-229692)
chr4 (29-131)||(18965197-18965300)
chr4 (13-93)||(17504329-17504410)
chr4 (24-163)||(24336144-24336284)
chr4 (30-163)||(24335786-24335920)
chr4 (41-176)||(40160489-40160624)
chr4 (13-175)||(229174-229337)
chr4 (13-131)||(34807173-34807293)
chr4 (42-163)||(35193702-35193823)
chr4 (27-103)||(46193490-46193568)
chr4 (13-93)||(14439923-14440004)
chr4 (12-131)||(46737024-46737144)
chr4 (29-120)||(18965522-18965614)
chr4 (13-131)||(28465138-28465257)
chr4 (16-163)||(33689854-33690001)
chr4 (13-131)||(54440628-54440745)
chr4 (13-125)||(14440198-14440311)
chr4 (74-175)||(23986533-23986635)
chr4 (29-90)||(48526565-48526627)
chr4 (29-93)||(12593409-12593474)
chr4 (13-93)||(21034606-21034687)
chr4 (13-93)||(35643662-35643743)
chr4 (29-93)||(45838933-45838998)
chr4 (29-103)||(11153231-11153307)
chr4 (29-103)||(12503521-12503597)
chr4 (30-93)||(15523331-15523395)
chr4 (29-103)||(20470895-20470971)
chr4 (29-84)||(22434284-22434340)
chr4 (29-103)||(45082808-45082884)
chr4 (13-103)||(22170306-22170397)
chr4 (13-103)||(22434547-22434637)
chr4 (30-103)||(25938056-25938131)
chr4 (13-103)||(33109769-33109860)
chr4 (13-103)||(45082516-45082606)
chr4 (29-103)||(51021180-51021255)
chr4 (13-59)||(12503805-12503851)
chr4 (29-125)||(12593087-12593184)
chr4 (29-131)||(19528926-19529030)
chr4 (29-131)||(24851851-24851955)
chr4 (13-131)||(34789752-34789872)
chr4 (13-93)||(6616768-6616849)
chr4 (13-90)||(15523603-15523680)
chr4 (13-93)||(16214865-16214946)
chr4 (29-93)||(26974379-26974444)
chr4 (13-93)||(41608470-41608551)
chr4 (29-93)||(46736750-46736815)
chr4 (14-125)||(56077695-56077807)
chr4 (29-103)||(12234713-12234789)
chr4 (29-103)||(25447332-25447408)
chr4 (29-103)||(54995154-54995230)
chr4 (13-103)||(4219642-4219733)
chr4 (13-103)||(12234414-12234505)
chr4 (15-93)||(24851560-24851639)
chr4 (29-122)||(34807525-34807619)
chr4 (13-103)||(46193774-46193865)
chr4 (13-103)||(51020882-51020973)
chr4 (13-79)||(18751971-18752037)
chr4 (13-59)||(25937800-25937846)
chr4 (13-125)||(34789445-34789558)
chr4 (13-125)||(54440939-54441052)
chr4 (13-93)||(41114254-41114335)
chr4 (29-103)||(2118378-2118454)
chr4 (29-103)||(4219943-4220019)
chr4 (30-93)||(28166099-28166163)
chr4 (20-103)||(38962195-38962279)
chr4 (13-131)||(45838604-45838723)
chr4 (13-103)||(2118665-2118755)
chr4 (13-103)||(11153516-11153607)
chr4 (13-103)||(23494528-23494619)
chr4 (13-48)||(48526336-48526371)
chr4 (29-90)||(18751698-18751760)
chr4 (13-125)||(36168701-36168814)
chr4 (89-175)||(51309952-51310038)
chr4 (51-131)||(6617070-6617151)
chr4 (19-103)||(25447611-25447696)
[»] chr7 (63 HSPs)
chr7 (13-175)||(35578912-35579074)
chr7 (29-175)||(34595158-34595305)
chr7 (30-163)||(9393761-9393894)
chr7 (16-163)||(39136711-39136858)
chr7 (13-163)||(35579256-35579406)
chr7 (20-163)||(9394108-9394251)
chr7 (50-176)||(33880632-33880759)
chr7 (13-124)||(34594647-34594758)
chr7 (31-164)||(4477726-4477860)
chr7 (51-175)||(49064047-49064171)
chr7 (20-93)||(32427397-32427470)
chr7 (42-139)||(45815465-45815563)
chr7 (13-125)||(25637568-25637681)
chr7 (13-125)||(9181595-9181708)
chr7 (13-131)||(28687869-28687988)
chr7 (13-131)||(7732545-7732664)
chr7 (29-131)||(16081685-16081788)
chr7 (29-103)||(19590909-19590985)
chr7 (29-84)||(19830804-19830860)
chr7 (13-93)||(33880955-33881035)
chr7 (13-131)||(11973772-11973891)
chr7 (13-103)||(19830505-19830596)
chr7 (13-103)||(37786852-37786943)
chr7 (29-131)||(26026374-26026478)
chr7 (31-103)||(37787153-37787227)
chr7 (13-163)||(48247961-48248113)
chr7 (29-93)||(16081394-16081459)
chr7 (13-93)||(27245299-27245380)
chr7 (13-103)||(19590610-19590701)
chr7 (13-103)||(29100220-29100311)
chr7 (30-103)||(32004699-32004774)
chr7 (30-103)||(35288988-35289063)
chr7 (13-103)||(38858728-38858819)
chr7 (29-102)||(38859025-38859100)
chr7 (13-131)||(9181779-9181901)
chr7 (13-131)||(25637254-25637374)
chr7 (15-103)||(2659211-2659300)
chr7 (66-175)||(5334243-5334352)
chr7 (29-93)||(24929689-24929754)
chr7 (15-103)||(32004985-32005074)
chr7 (15-103)||(34534162-34534251)
chr7 (13-93)||(48247686-48247767)
chr7 (32-175)||(28687606-28687750)
chr7 (29-163)||(39388652-39388789)
chr7 (13-125)||(5745702-5745815)
chr7 (13-163)||(14311340-14311492)
chr7 (13-125)||(26026688-26026801)
chr7 (13-125)||(27245574-27245687)
chr7 (29-93)||(786878-786943)
chr7 (12-175)||(2758067-2758231)
chr7 (13-93)||(11971433-11971514)
chr7 (13-70)||(26048067-26048124)
chr7 (65-131)||(45815398-45815466)
chr7 (29-103)||(2658924-2659000)
chr7 (29-103)||(4641828-4641904)
chr7 (29-103)||(29099935-29100011)
chr7 (29-103)||(34533876-34533952)
chr7 (13-103)||(4641525-4641616)
chr7 (15-93)||(14311659-14311738)
chr7 (29-90)||(23952830-23952892)
chr7 (15-96)||(26048319-26048401)
chr7 (13-131)||(35161171-35161291)
chr7 (29-93)||(15712460-15712525)
[»] chr1 (77 HSPs)
chr1 (13-175)||(39485078-39485240)
chr1 (13-173)||(17088161-17088326)
chr1 (13-175)||(29021234-29021398)
chr1 (32-175)||(23526671-23526815)
chr1 (27-163)||(44802555-44802692)
chr1 (13-160)||(9833522-9833670)
chr1 (19-175)||(17088516-17088672)
chr1 (13-175)||(50926611-50926774)
chr1 (29-163)||(48173773-48173909)
chr1 (13-175)||(50926243-50926408)
chr1 (40-175)||(45048533-45048668)
chr1 (13-163)||(45048180-45048330)
chr1 (50-175)||(44291314-44291442)
chr1 (33-162)||(44291701-44291831)
chr1 (13-162)||(29020906-29021056)
chr1 (20-103)||(29307317-29307402)
chr1 (13-93)||(9992250-9992331)
chr1 (29-163)||(52335896-52336031)
chr1 (15-131)||(8230013-8230130)
chr1 (13-131)||(1837562-1837681)
chr1 (13-96)||(37505438-37505522)
chr1 (29-175)||(44954612-44954759)
chr1 (13-103)||(5962947-5963038)
chr1 (13-103)||(15173181-15173272)
chr1 (13-103)||(50970647-50970738)
chr1 (27-103)||(17433597-17433675)
chr1 (13-125)||(21938626-21938739)
chr1 (29-163)||(6224722-6224859)
chr1 (20-103)||(9019338-9019423)
chr1 (29-93)||(17641750-17641815)
chr1 (55-175)||(23526942-23527063)
chr1 (29-163)||(30786796-30786932)
chr1 (13-93)||(34555750-34555831)
chr1 (29-103)||(18984503-18984579)
chr1 (13-103)||(8678911-8679001)
chr1 (29-90)||(5962677-5962739)
chr1 (13-131)||(10278605-10278725)
chr1 (29-125)||(10278936-10279030)
chr1 (13-59)||(21856412-21856458)
chr1 (13-59)||(29869750-29869796)
chr1 (31-103)||(50970363-50970437)
chr1 (29-93)||(8229735-8229800)
chr1 (30-125)||(9992542-9992638)
chr1 (29-93)||(16299068-16299133)
chr1 (29-93)||(33144013-33144078)
chr1 (13-90)||(33144288-33144365)
chr1 (13-131)||(443921-444040)
chr1 (29-175)||(2868094-2868241)
chr1 (20-103)||(5540194-5540278)
chr1 (29-103)||(15173478-15173554)
chr1 (20-103)||(15646571-15646655)
chr1 (13-131)||(16298739-16298858)
chr1 (29-103)||(17112366-17112442)
chr1 (29-103)||(21856127-21856203)
chr1 (20-103)||(29307038-29307122)
chr1 (29-103)||(29870003-29870079)
chr1 (29-131)||(34555436-34555541)
chr1 (29-103)||(39154404-39154480)
chr1 (30-93)||(50305169-50305233)
chr1 (30-103)||(4636356-4636431)
chr1 (13-103)||(18984204-18984295)
chr1 (16-93)||(1744422-1744500)
chr1 (15-53)||(4636108-4636146)
chr1 (13-59)||(17433346-17433392)
chr1 (13-131)||(29438987-29439107)
chr1 (29-120)||(15646260-15646353)
chr1 (29-93)||(23340278-23340343)
chr1 (29-93)||(44954321-44954386)
chr1 (29-103)||(8678626-8678702)
chr1 (29-131)||(37421217-37421322)
chr1 (13-131)||(44582114-44582233)
chr1 (50-89)||(48174122-48174161)
chr1 (29-125)||(4080084-4080181)
chr1 (113-175)||(25274769-25274831)
chr1 (29-163)||(37505092-37505228)
chr1 (29-93)||(17641460-17641525)
chr1 (29-70)||(30787158-30787199)
[»] scaffold0108 (2 HSPs)
scaffold0108 (13-175)||(15126-15288)
scaffold0108 (50-176)||(15506-15632)
[»] chr8 (54 HSPs)
chr8 (15-175)||(28876916-28877077)
chr8 (14-85)||(18805266-18805337)
chr8 (13-175)||(28877260-28877422)
chr8 (13-175)||(35427182-35427345)
chr8 (13-163)||(7910986-7911137)
chr8 (13-131)||(28254796-28254915)
chr8 (29-131)||(599589-599692)
chr8 (13-163)||(9796751-9796902)
chr8 (29-131)||(41260647-41260750)
chr8 (13-103)||(44831614-44831705)
chr8 (13-125)||(5731182-5731295)
chr8 (13-129)||(16578466-16578583)
chr8 (13-163)||(18049615-18049767)
chr8 (16-131)||(26252866-26252982)
chr8 (13-93)||(28254521-28254602)
chr8 (29-103)||(13225023-13225099)
chr8 (13-131)||(18049961-18050080)
chr8 (29-175)||(42035785-42035932)
chr8 (13-84)||(13224745-13224816)
chr8 (29-131)||(6115496-6115600)
chr8 (13-59)||(12571994-12572040)
chr8 (13-175)||(34799092-34799256)
chr8 (29-93)||(5730912-5730977)
chr8 (29-89)||(33743021-33743082)
chr8 (29-103)||(9928994-9929070)
chr8 (29-103)||(11656841-11656917)
chr8 (29-103)||(12572235-12572311)
chr8 (29-103)||(19176375-19176451)
chr8 (50-131)||(16578165-16578247)
chr8 (13-103)||(19176659-19176750)
chr8 (29-102)||(44831333-44831408)
chr8 (12-93)||(599867-599949)
chr8 (13-59)||(4630161-4630207)
chr8 (13-59)||(33328288-33328334)
chr8 (29-93)||(9797112-9797177)
chr8 (13-90)||(9930026-9930103)
chr8 (29-93)||(18428147-18428212)
chr8 (15-103)||(33743290-33743379)
chr8 (29-93)||(35693965-35694030)
chr8 (29-103)||(33328524-33328600)
chr8 (29-131)||(34799469-34799572)
chr8 (29-103)||(41681518-41681594)
chr8 (89-176)||(7910628-7910714)
chr8 (15-93)||(35694242-35694321)
chr8 (16-131)||(42036144-42036261)
chr8 (35-103)||(4629882-4629952)
chr8 (74-132)||(10047068-10047126)
chr8 (55-131)||(15255910-15255987)
chr8 (31-103)||(34540934-34541008)
chr8 (29-93)||(15256214-15256279)
chr8 (13-90)||(31133319-31133396)
chr8 (30-90)||(31133605-31133666)
chr8 (13-70)||(35163817-35163874)
chr8 (29-93)||(35426908-35426973)
[»] scaffold0712 (2 HSPs)
scaffold0712 (29-131)||(6777-6885)
scaffold0712 (30-125)||(6455-6551)
[»] scaffold0709 (2 HSPs)
scaffold0709 (29-131)||(6795-6903)
scaffold0709 (30-125)||(6473-6569)
[»] scaffold0273 (1 HSPs)
scaffold0273 (13-103)||(4576-4667)
[»] scaffold0027 (2 HSPs)
scaffold0027 (20-103)||(42254-42339)
scaffold0027 (13-59)||(42528-42574)
[»] scaffold0097 (1 HSPs)
scaffold0097 (13-175)||(46279-46443)
[»] scaffold0951 (2 HSPs)
scaffold0951 (15-103)||(1752-1841)
scaffold0951 (29-103)||(2051-2127)
[»] scaffold0019 (1 HSPs)
scaffold0019 (13-90)||(134042-134119)
[»] scaffold0157 (2 HSPs)
scaffold0157 (29-103)||(16880-16956)
scaffold0157 (13-59)||(16626-16672)
[»] scaffold0295 (2 HSPs)
scaffold0295 (13-103)||(4878-4969)
scaffold0295 (29-73)||(5179-5224)
[»] scaffold0021 (1 HSPs)
scaffold0021 (50-131)||(159288-159370)
[»] scaffold0025 (1 HSPs)
scaffold0025 (13-93)||(78412-78493)
[»] scaffold1223 (2 HSPs)
scaffold1223 (13-103)||(838-928)
scaffold1223 (20-103)||(1116-1201)
[»] scaffold0417 (2 HSPs)
scaffold0417 (29-103)||(11007-11083)
scaffold0417 (13-48)||(10762-10797)
[»] scaffold0432 (1 HSPs)
scaffold0432 (13-48)||(10242-10277)


Alignment Details
Target: chr5 (Bit Score: 324; Significance: 0; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 15 - 453
Target Start/End: Complemental strand, 32305991 - 32305532
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgatt 114  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| | ||||    
T  32305991 catagcgggtaagtctaaaactgtcatttctctgtgtttctggagttgaaaataagaggtaggactaaaactgcaaaaacatgatagtttagggacgatt 32305892  T
Q  115 ttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaagggttggcatgaggg---------------------ta 193  Q
    ||||||||||| ||||| | |||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||                     ||    
T  32305891 ttgttcgatttaaaagaggtagaacaattttcgtgagctgatcaaaatgcgatgaccaaaaagggttggcatgagggcaaaaagggttggcatgagggta 32305792  T
Q  194 aagctattaaggccgttttcttaggcctcttctagaaagggtttgatggccaagaggaattgatggttgtgaaaaattgtgaacaatttttggttattta 293  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32305791 aagctactaagaccgttttcttaggcctcttctagaaagggtttgatggctaagaggaattgatggttgtgaaaaattgtgaacaatttttggttattta 32305692  T
Q  294 tgaaagaactttttccactctctaaaatcatttaagaagtatacatgtttaaaagaatattgtgtctttcagatcatgtataattcaaaacgaaaacaaa 393  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32305691 tgcaagaactttttccactctctaaaatcatttaagaagtatacatgtttaaaagaatattgtgtctttcagatcatgtataattcaaaacgaaaacaaa 32305592  T
Q  394 aatacaagtgttatctttaaaattggaaatttgaaacagttttatataacatatttataa 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32305591 aatacaagtgttatctttaaaattggaaatttgaaacagttttatataacatatttataa 32305532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 560 - 847
Target Start/End: Complemental strand, 32305422 - 32305134
Alignment:
Q  560 tagaacaagatatctcattcttagagagttattctagcctagtatattttcaannnnnnnatcttatgctctcgactactaattgtttagttctctattg 659  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||    
T  32305422 tagaataagatatctcattcttagagagttattctagcctagtatattttcaatttttttatcttatgctctcgactattaattgtttagttctctattg 32305323  T
Q  660 tttgtaatatagtattacaaatttattgg-atcttcttccaattaatatgtatcatacatatttctcaccattctcattaatattgatttgtaaaatact 758  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32305322 tttgtaatatagtattacaaatttattgggaccttcttccaattaatatgtatcatacatatttctcaccattctcattaatattgatttgtaaaatact 32305223  T
Q  759 ttcaactgaatcttcatctctttcaaaaatgtgtagtttgatgtgtatctactgtgctgcaacgttatgtatgctaatgacaaagactc 847  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32305222 ttcaactgaatcttcatctctttcaaaaatgtgtagtttgatgtgtatctactgtgctgcaacgttatgtatgctaatgacaaagactc 32305134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 704 - 847
Target Start/End: Original strand, 32365548 - 32365691
Alignment:
Q  704 atatgtatcatacatatttctcaccattctcattaatattgatttgtaaaatactttcaactgaatcttcatctctttcaaaaatgtgtagtttgatgtg 803  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  32365548 atatgtatcatttatatttctcaccattctcattaatattgatttgtaaaatactttcaactgaatcttcatctctttgaatgatgtgtagtttgatgtg 32365647  T
Q  804 tatctactgtgctgcaacgttatgtatgctaatgacaaagactc 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32365648 tatctactgtgctgcaacgttatgtatgctaatgacaaagactc 32365691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 664 - 847
Target Start/End: Original strand, 32318454 - 32318645
Alignment:
Q  664 taatatagtattacaaatttattgg-atcttcttccaattaatatgtatcatac-------atatttctcaccattctcattaatattgatttgtaaaat 755  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||       |||||||| |||||||||||||||||||| |||||||||    
T  32318454 taatatagtattacaaatttattgggaccttcttccaattaatatgtatcatacattatacatatttctgaccattctcattaatattgacttgtaaaat 32318553  T
Q  756 actttcaactgaatcttcatctctttcaaaaatgtgtagtttgatgtgtatctactgtgctgcaacgttatgtatgctaatgacaaagactc 847  Q
    ||||| |||||||| ||||||||||| ||  | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  32318554 actttgaactgaatattcatctctttgaatgacgtgtagtttgatgtgtatctactgtgctgcaacgctatgtatgctaatgacaaatactc 32318645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 10721945 - 10721798
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatgattttgttcgatttga 127  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||||||||||||    
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acgattttgttcgatttga 10721847  T
Q  128 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 176  Q
    ||||  ||  || |||||  ||||||||||||||||||| |||||||||    
T  10721846 aagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaa 10721798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 16752955 - 16753104
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc---aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||| |||| ||||||||||   ||||||||||||||||||| ||| ||| |||||||||    
T  16752955 ctaaaactgccatttttctgcgtttctggagttgaaaataggagttaggtctaaaactgcaaaaaaaacatgataatttagg-atggtttcgttcgattt 16753053  T
Q  126 gaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 176  Q
    |||||| ||||||| |||||  |||| ||||||||||| ||||||||||||    
T  16753054 gaaagaggcagaaccattttcgtgagttggtcaaaatgcgatgaccaaaaa 16753104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 28495003 - 28494857
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatgattttgttcgatttga 127  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |   |||||||||||||||    
T  28495003 ctaaaattgtcacttctctgcgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acagttttgttcgatttga 28494905  T
Q  128 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||| ||||||| |||||  ||| ||||||||||||| | ||||||||    
T  28494904 aagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaa 28494857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 27 - 175
Target Start/End: Original strand, 41834443 - 41834592
Alignment:
Q  27 gtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcgatt 124  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||  |||||||||||| |||||| | | |||||||||||     
T  41834443 gtctaaaactgtcatttctctgcgtttcaagagttgaaaataggaggtaggactaaaactgcaaaaaaacatgatagtttagg-acggttttgttcgatc 41834541  T
Q  125 tgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||| |||| || |||||  |||||||||||||||| || ||||||||    
T  41834542 tgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaa 41834592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 16752757 - 16752607
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatg 111  Q
    |||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||||||| ||| ||||||||| ||||||| ||| |||| | | |    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggagttgaaaataggaggtatgacaaaaactgcaaaaaacat-atagtttatggacg 16752659  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||||||||||||||||||  |  |||||  ||||||||||||||||    
T  16752658 attttgttcgatttgaaagaagcatgatcattttcgtgagctggtcaaaatg 16752607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 27307220 - 27307086
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatgattttgttcgatttga 127  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  27307220 ctaaaactgtcatttctatgcgtttctggagttgaaaataggaggtaagactaaaactgcaaaaaacatgatagtttagg-atgattttgttcaatttga 27307122  T
Q  128 aagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||| ||  || ||||| || || |||||||||||    
T  27307121 aagaaacatgaccattttcataagttggtcaaaatg 27307086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 22651521 - 22651371
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||| ||||| | || ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| | |||    
T  22651521 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgcaaaaacatgatagtttaaggatg 22651422  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaat 162  Q
     ||||||| ||||| ||||| |||  || ||||   |||||||||||||||    
T  22651421 gttttgtttgatttaaaagaggcatgaccatttccgtgagctggtcaaaat 22651371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 27307428 - 27307581
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc----aaaaacatgataatttaggt 108  Q
    |||||||||||| | ||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| |    |||||||| ||| |||| |     
T  27307428 agcatagggggtggatctaaaaatgtcatttctctgcatttctggagttgaaaataggaggtaggactaaaactacaaaaaaaaacat-atagtttatgg 27307526  T
Q  109 atgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    | | ||||||||||||||||||| | ||||| |||||  ||| ||||||||||||    
T  27307527 acggttttgttcgatttgaaagagggagaaccattttcgtgaactggtcaaaatg 27307581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 28495211 - 28495291
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||| | ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  28495211 agcatatgaggtaggtctaaaactatcatttctctgcggttctggagttgaaaataggaggtaggactaaaactgcaaaaa 28495291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 17260454 - 17260352
Alignment:
Q  61 tgaaaataggaggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaa 159  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| | |  |||||||||||||||||||| ||||||| |||||| ||| ||| ||||    
T  17260454 tgaaaatagggggtaggactaaaactgcaaaaaacatgataatttatggacaattttgttcgatttgaaagatgcagaaccatttttgtgaactgatcaa 17260355  T
Q  160 aat 162  Q
    |||    
T  17260354 aat 17260352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 4966991 - 4966829
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || | ||||||||||||||| ||  ||||| |||||| ||||||| | || |||||||||||| |||||||| ||| |||||| | |    
T  4966991 agcataggtggttggcccaaaactgtcatttctgtgcatttctagagttggaaataggggatatgactaaaactgctaaaaacat-atagtttagggacg 4966893  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||||||||||| ||||| |||| || |||||  |||| ||||||||||| || ||||||||    
T  4966892 attttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaa 4966829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 28289858 - 28289741
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaact-gcaaaaacatgataatttaggtatga 112  Q
    |||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||| | |||||||| |||||||||| | ||    
T  28289858 cataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaacat-ataatttagggacga 28289760  T
Q  113 ttttgttcgatttgaaaga 131  Q
    ||||||||||||| |||||    
T  28289759 ttttgttcgatttaaaaga 28289741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 13557140 - 13557017
Alignment:
Q  40 atttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaa 138  Q
    ||||||||| ||||||| |||| |||||| || ||||||||||||||||| ||||||||||| |||| | | ||||||||| ||||||||||| |||  |    
T  13557140 atttctctgcgtttctgcagttcaaaataagatgtaggactaaaactgcaaaaaacatgatagtttaag-acgattttgtttgatttgaaagaggcatga 13557042  T
Q  139 caatttttatgagctggtcaaaatg 163  Q
    | |||||  ||||||||||||||||    
T  13557041 ccattttcgtgagctggtcaaaatg 13557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 21371082 - 21371217
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||| | || ||||||||||||| ||||| |||| ||||||||||| ||| |||||||| ||| |||||| | ||||||||| |||||     
T  21371082 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacat-atagtttagggacgattttgtttgattta 21371180  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||| | || || | ||||||||| |||||||||||    
T  21371181 aaagaggtaggaccaattttatgagttggtcaaaatg 21371217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 164350 - 164276
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaacatgataatt 103  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||| || |||||||||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaatgataatt 164276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 14215402 - 14215340
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| |||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 14215340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 18150109 - 18150213
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||| ||||||| | || ||||||||||||| ||||| |||| |||||||||||||||  |||||||| ||| |||||| |||||||||||||||||    
T  18150109 ctaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttagggatgattttgttcgattt 18150207  T
Q  126 gaaaga 131  Q
     |||||    
T  18150208 aaaaga 18150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 28290030 - 28290127
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||| | | |||||||||||||||    
T  28290030 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 28290127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 20266327 - 20266404
Alignment:
Q  55 tggagttgaaaataggaggtaggactaaaactgcaaaaac-atgataatttaggtatgattttgttcgatttgaaaga 131  Q
    ||||| |||||||||| ||||||||||||||| ||| ||| |||||| |||||| | |||||||||||||||||||||    
T  20266327 tggaggtgaaaatagggggtaggactaaaactacaacaaccatgatagtttagggacgattttgttcgatttgaaaga 20266404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 39083520 - 39083455
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| || |||||||||||||||||    
T  39083520 ctaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaa 39083455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 2864915 - 2864839
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2864839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 5819090 - 5819014
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| ||| |||| ||||| ||| |||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataatt 5819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 38900800 - 38900657
Alignment:
Q  33 aactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttgaaag 130  Q
    ||||||||||| | |  |||| |||||||| ||||||| || |||||||||||||||||||| ||| |||||||||| | ||||||||||||||| ||||    
T  38900800 aactgtcatttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttcgatttaaaag 38900702  T
Q  131 aagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    | | || |  |||||  |||| ||||||||||| || ||||||||    
T  38900701 aggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaa 38900657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 8647614 - 8647523
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 8647523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 19359312 - 19359221
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 19359221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 15709146 - 15709100
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 15709100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 16018969 - 16019027
Alignment:
Q  27 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaa 84  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaa 16019027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 25000471 - 25000549
Alignment:
Q  27 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||| |||| |||| ||||| ||| |||||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataatt 25000549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 32697593 - 32697759
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgca----aaaacatgataatttagg 107  Q
    |||||||| ||| || |||||  |||||||||| |||||||||||||||| ||||| |||||||  ||||||||||||    ||||||| ||| ||||||    
T  32697593 agcataggtggttggactaaatttgtcatttctgtgtgtttctggagttggaaatagggaggtatcactaaaactgcaaaataaaacat-atagtttagg 32697691  T
Q  108 tatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     | |||| |||||||||| ||||| | || || | |||  |||| |||||||||||  ||||||||||    
T  32697692 gacgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaa 32697759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 19291533 - 19291452
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| |||| ||||| || |||||||||||||||||    
T  19291533 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaa 19291452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 29454901 - 29454840
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgca 89  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||| ||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgca 29454840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 4967155 - 4967304
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa---catgataatttaggtatgattttgttcgatt 124  Q
    |||||||| |||||| | || |||||| |||||  ||||||| |  ||||||||||||||||||||   ||| ||| |||||| | ||||||||||||||    
T  4967155 ctaaaactatcatttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaacat-atagtttagggacgattttgttcgatt 4967253  T
Q  125 tgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    | ||||| | |  || |||||| |||| |||||||||||||| ||||||||    
T  4967254 taaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaa 4967304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 8419008 - 8419072
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||| |||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 8419072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 18183131 - 18183055
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagt-tgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||| || | ||||||||||||||||| |||| ||||| ||| |||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 18183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 164560 - 164651
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||   ||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataatt 164651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2865124 - 2865195
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaa 84  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||   ||||| || |||||||| ||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaa 2865195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 5819298 - 5819389
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||| |||||||||||||||||| || |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 5819389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 8461106 - 8461071
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctg 48  Q
    ||||||||||||||||||||||||||||||||||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctg 8461071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 18183338 - 18183429
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   |||||  | |||||||| |||| ||||| ||| |||||||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataatt 18183429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 15709353 - 15709415
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||| | || ||||||| |||||||||||||||||| |||| |||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaa 15709415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 24331722 - 24331672
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 78  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctagga 24331672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 24331929 - 24331975
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggag 24331975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 8461315 - 8461376
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgca 89  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||| ||| |||| ||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgca 8461376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 14340793 - 14340858
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||||||||  |||| |||||||| |||| ||||| ||||||||||||| ||||||    
T  14340793 ctaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaactacaaaaa 14340858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 24362205 - 24362282
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||| || |||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| |||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 24362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 28595274 - 28595193
Alignment:
Q  94 catgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||| |||||| | ||||||||||| |||||||||||||  || |||||| | |||||||||||||  || ||||||||    
T  28595274 catgatagtttagggacgattttgttcgttttgaaagaagcatgaccatttttgtaagctggtcaaaatacgaggaccaaaa 28595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 8647822 - 8647898
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||| ||||| |||||||||| ||||| ||| |||| ||||| ||| |||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataatt 8647898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 15029679 - 15029842
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||  ||||| |||| | | ||||||||||| |||||||| ||| |||| | |     
T  15029679 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaacat-atagtttaaggac 15029777  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||| ||| | | |  || |||||  |||| ||||||||||| || ||||||||    
T  15029778 gattttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaa 15029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 19359520 - 19359576
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaa 84  Q
    ||||||||| |||||||||  |||||||||| |||||||||||||||||||| ||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaa 19359576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 20261002 - 20260938
Alignment:
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||| ||||||||||| || | || ||||| ||||||| |||||||||||| ||||||||    
T  20261002 gattttgtttgatttgaaagaggcgggaccattttcatgagctagtcaaaatgtgaggaccaaaa 20260938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 22651780 - 22651832
Alignment:
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||||||||||||| | ||||||| |||||  ||||||||||||||||    
T  22651780 gattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatg 22651832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 14464929 - 14465004
Alignment:
Q  55 tggagttgaaaataggaggtaggactaaaactgcaaaaac-atgataatttaggtatgattttgttcgatttgaaa 129  Q
    ||||| |||||||| | |||| || ||||||||||||||  ||||||||||||| | |||||| ||||||||||||    
T  14464929 tggaggtgaaaataaggggtatgattaaaactgcaaaaaatatgataatttagggacgattttattcgatttgaaa 14465004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 14215616 - 14215646
Alignment:
Q  17 tagggggtaggtctaaaactgtcatttctct 47  Q
    |||||||||||||||||||||||||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctct 14215646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 16018763 - 16018733
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcattt 43  Q
    |||||||||||||||||||||||||||||||    
T  16018763 agcatagggggtaggtctaaaactgtcattt 16018733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 24325580 - 24325626
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||| || |||||||||||||||||||||||  ||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggag 24325626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 5161743 - 5161678
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || |||| || ||||| ||||||| || || |||||||||||||||||    
T  5161743 ctaaaactgtcatttctatgcgtttttgaagttggaaataggaagataagactaaaactgcaaaaa 5161678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 6018455 - 6018398
Alignment:
Q  47 tgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||| ||||| |||||||||  ||||||||||||||||||| ||| |||||||||    
T  6018455 tgtgtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaatgataatt 6018398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 15372242 - 15372287
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctgga 58  Q
    |||||| | ||||||||||||||||||||||||||| |||| ||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttgga 15372287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 6e-58; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 28143400 - 28143562
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatga 112  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| | ||    
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaaaaacatgatagtttagggacga 28143499  T
Q  113 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||||||| |||| || |||||  |||||||||||||||| || ||||||||    
T  28143500 ttttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaa 28143562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 31797166 - 31797310
Alignment:
Q  31 aaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaaa 129  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||||| | | |||||||||||||||||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatttgaaa 31797264  T
Q  130 gaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    || |||  || |||||  ||||||||||||||||||| ||||||||    
T  31797265 gaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaa 31797310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 14942225 - 14942379
Alignment:
Q  24 taggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc---aaaaacatgataatttaggtatgattttgttc 120  Q
    ||||||||||||||  |||||||||  ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||| | |  |||||||||    
T  14942225 taggtctaaaactgcgatttctctgcatttctggagttgaaaataggatgtaggactaaaactgcaaaaaaaacatgataatttatggacaattttgttc 14942324  T
Q  121 gatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||||||||  ||  || |||||  |||||||||||||||| || ||||||||    
T  14942325 gatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaa 14942379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 2190482 - 2190609
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgcaaaaa--catgataatttaggtatgattttgttcgatttgaaagaagcagaacaattttta 147  Q
    |||| ||||| ||||| | || ||||||||||||||||||||||  | |||||||||||| | ||||||||||||||||||| | |||| || | |||      
T  2190482 gtttttggagatgaaattcgggggtaggactaaaactgcaaaaaagcgtgataatttagggacgattttgttcgatttgaaaaaggcaggaccaatttcg 2190581  T
Q  148 tgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||||||||||||| |||||||||||    
T  2190582 tgagctggtcaaaatgcgatgaccaaaa 2190609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 11540008 - 11540171
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||  || |||||||||||| |||||||| ||| |||| | |     
T  11540008 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaacat-atagtttatggac 11540106  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||| ||||| | || || |||||  |||| ||||||||||| |||||||||||    
T  11540107 gattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaa 11540171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 33920772 - 33920669
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| |||||||||||||||||||| ||| ||| |||||| | |||||||||||||||     
T  33920772 ctaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaatcat-atagtttagggacgattttgttcgattta 33920674  T
Q  127 aaaga 131  Q
    |||||    
T  33920673 aaaga 33920669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 42192400 - 42192253
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||| | || ||||||||||||  ||||||| || |||||||||||||||||||| ||| ||| |||||| | |||||||||||||||     
T  42192400 ctaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 42192302  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||| | || || |||||  |||| |||||||||||||| ||||||||    
T  42192301 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaa 42192253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 43160170 - 43160066
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatg-ataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||| | || ||||||||||||||||||| |||| |||||||||||||||||||| ||| ||| |||||| | |||||||||||||||     
T  43160170 ctaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacgattttgttcgattta 43160071  T
Q  127 aaaga 131  Q
    |||||    
T  43160070 aaaga 43160066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 4355929 - 4355812
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatga 112  Q
    |||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| ||||||||||||||| |||||||| ||| |||||| | ||    
T  4355929 cataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacga 4355831  T
Q  113 ttttgttcgatttgaaaga 131  Q
    ||||||||||||| |||||    
T  4355830 ttttgttcgatttaaaaga 4355812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 42192612 - 42192776
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || || |||||||||||||||||  |||  || |||||| |    
T  42192612 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatc-tagtttaggga 42192710  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||||||||||||||| ||||| | || || |||||  |||| ||||||||||| || ||||||||    
T  42192711 cgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaa 42192776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 18450991 - 18450926
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaa 18450926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 9330164 - 9330284
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||||| |||||||||  ||||||||||||| || ||||||||||||||||||||  ||| ||| ||| || |    
T  9330164 agcataggtggttggactaaaactgtcatttctatgtgtttctatagttgaaaataggtagataggactaaaactgcaaaaaaacat-atagtttgggga 9330262  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  9330263 cgattttgttcgatttaaaaga 9330284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 15550834 - 15550730
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| || ||||||||||||||||||| |||  |||||||||||||||  |||||||| ||| |||||| | |||||||||||||||    
T  15550834 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacat-atagtttagggacgattttgttcgattt 15550736  T
Q  126 gaaaga 131  Q
     |||||    
T  15550735 aaaaga 15550730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 5560920 - 5561001
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  5560920 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 5561001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 4809055 - 4808936
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || ||||||||||||| | |||||||| ||| |||| | |     
T  4809055 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactacaaaaaacat-atagtttatggac 4808957  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  4808956 gattttgttcgatttaaaaga 4808936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 13399582 - 13399479
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||||| | |||||||||| ||||     
T  13399582 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttccattta 13399484  T
Q  127 aaaga 131  Q
    |||||    
T  13399483 aaaga 13399479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 43058717 - 43058792
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaacatgataatt 103  Q
    ||||||||| |||||||||| |||||||||||| |||||||||||||||||| |||| ||||| || |||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaatgataatt 43058792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 43216079 - 43216198
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || |||||| |||||||||| ||  |||||||||||| |||||| ||| ||||||||||||||||||||    ||| |||||| | |    
T  43216079 agcataggtggttggactaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaatatatagtttagggacg 43216178  T
Q  112 attttgttcgatttgaaaga 131  Q
    |||||||||||||| |||||    
T  43216179 attttgttcgatttaaaaga 43216198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 11539814 - 11539662
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||||| || ||||||||||||||||||||  ||| ||| |||| | |    
T  11539814 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 11539716  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||||||||||||||| ||| ||  || || |||||  |||| |||||||||||    
T  11539715 cgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatg 11539662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 16175719 - 16175839
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||||| || ||||||||||||||||||||  ||| ||| |||| | |    
T  16175719 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 16175817  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  16175818 cgattttgttcgatttaaaaga 16175839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 11090695 - 11090606
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 11090606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 26538454 - 26538539
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||||| || |||||||| |||| ||||| ||| |||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 26538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 33920981 - 33921062
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || |||||| |||||| ||||| |||| ||||||||||||||||||||    
T  33920981 agcataggtggttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaa 33921062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 63133 - 62982
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || |||||| |||||| ||||| |||| ||||||||||||||| |||||||| ||| |||| | |     
T  63133 agcataggtggttggactaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 63035  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||||||||| ||| | | || || |||||  |||| |||||||||||    
T  63034 gattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatg 62982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 7446730 - 7446806
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 7446806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 16953320 - 16953455
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || |||| |||||||| ||||||| || |||||||||||||||||||| ||| ||| |||||| |   |||||||||||||     
T  16953320 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacat-atactttagggacatttttgttcgattta 16953418  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||| | || || | ||| ||||| |||||||||||    
T  16953419 aaagaggtaggaccaatttcatgagttggtcaaaatg 16953455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 32418333 - 32418221
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || |||||| |||||||||| || ||||||||||||| |||| ||||| || |||||||||||||||||    ||| |||||| | |    
T  32418333 agcataggtggttggactaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttagggacg 32418234  T
Q  112 attttgttcgatt 124  Q
    |||||||||||||    
T  32418233 attttgttcgatt 32418221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 40815506 - 40815430
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||||| |||| ||||| ||| |||||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 40815430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 43160397 - 43160461
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 43160461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 239528 - 239437
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 239437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 40027316 - 40027225
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| |  |||||||| |||| ||||| ||| |||||||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataatt 40027225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 40815714 - 40815805
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 40815805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 6949625 - 6949547
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||||||||||||||||||||    
T  6949625 ataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaa 6949547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 14432315 - 14432241
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    ||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| |||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaa 14432241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 18451200 - 18451246
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 18451246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 38008127 - 38008007
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc--aaaaacatgataatttaggta 109  Q
    |||||||| ||| ||  |||||||||||||||| || |||| |||||||| ||||| |||| || ||||||||||||  |||||||| ||| |||||| |    
T  38008127 agcataggcggttggattaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacat-atagtttaggga 38008029  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  38008028 cgattttgttcgatttaaaaga 38008007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 44219804 - 44219707
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| || ||||||||||||| ||| | |||| ||||||||||||||| |||||||| |||||||| | |  ||||||||||||||    
T  44219804 ctaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacat-ataatttaaggacaattttgttcgattt 44219707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 63328 - 63409
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | || |||||| |||||| ||||||| || ||||||||||||||||||||    
T  63328 agcataggtggttggactaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaa 63409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 3025848 - 3025909
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||| |||| |||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaa 3025909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 8425514 - 8425453
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||| |||| |||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaa 8425453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 20128107 - 20128188
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  20128107 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaa 20128188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 22374709 - 22374785
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||  ||||| ||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 22374785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 1978494 - 1978569
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||| ||||||| ||||||||| ||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  1978494 taaaactgccatttctttgtgtttctagagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataatt 1978569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 26538273 - 26538182
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||| || ||||||||||||||| |||||||||||||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 26538182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 43058509 - 43058418
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||   ||||| || ||||| || |||| ||||| ||| |||||||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataatt 43058418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 1978284 - 1978238
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggag 1978238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 4356126 - 4356239
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||  ||| | ||||||||| |||||||| ||| |||| | |     
T  4356126 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgcaaaaaacat-atagtttaaggac 4356224  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  4356225 gattttgttcgattt 4356239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 13315673 - 13315591
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgttt-ctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| ||  ||| ||||||||| ||||||| || ||||||||||||||||||||    
T  13315673 agcataggtggttggactaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaa 13315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 14432525 - 14432575
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 78  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtagga 14432575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 38008321 - 38008434
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || |||||||| |||||| | || |||| |||||||| ||||||| || ||||||||||||||| |||||||| ||| |||| | |     
T  38008321 agcataggtggttggactaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 38008419  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  38008420 gattttgttcgattt 38008434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 43215883 - 43215805
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaa 92  Q
    |||||| ||| || ||||||||||||||||| |  |||| |||||||||||||| |||| || ||||||||||||||||    
T  43215883 cataggtggttggactaaaactgtcatttctattcgtttttggagttgaaaatagggagatatgactaaaactgcaaaa 43215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 13399790 - 13399871
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| ||  |||||||||||||||| || |||| |||||||| ||||| |||| || |||||||||||||||||    
T  13399790 agcataggtggttggattaaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaa 13399871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 22445800 - 22445735
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||| | |||||||||| ||||||||||| |||| ||| |||||||||| |||||    
T  22445800 ctaaaactgtcatttatgtgtgtttctgaagttgaaaatagggagatagtactaaaactgtaaaaa 22445735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 239736 - 239792
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaa 84  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||| ||| ||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaa 239792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 3025641 - 3025609
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttct 45  Q
    |||||||||||||||||||||||||||||||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttct 3025609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 8425736 - 8425820
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| |||| |||||   ||||| || |||| ||| |||| ||||| ||| |||||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataatt 8425820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 28616998 - 28617074
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||||| ||| |||| ||||| ||| |||||||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataatt 28617074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 40027524 - 40027600
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| |||||| ||| |||| ||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 40027600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 25336034 - 25336121
Alignment:
Q  77 gactaaaactgcaaaaacatg-ataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||||||||||| ||  |||||||||| | ||||||||||||||| ||||||| || || | |||  |||| |||||||||||    
T  25336034 gactaaaactgcaaaaaaatatataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatg 25336121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 20127910 - 20127832
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    ||||| ||| || |||||| |||||||| | || |||||||| |||| ||||||| || ||||||||||||||||||||    
T  20127910 ataggtggttggactaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaa 20127832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 4809249 - 4809330
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | ||  ||| || ||||| ||||||| || ||||||||||||||||||||    
T  4809249 agcataggtggttggactaaaactgtcatttttgtgcttttttgtagttggaaatagggagataggactaaaactgcaaaaa 4809330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 15551060 - 15551125
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    |||||||| | |||| | || ||||||||||||| ||||||| || ||||||||||||||||||||    
T  15551060 ctaaaactattatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 15551125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 16953097 - 16953032
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || |||||| |||||| ||||| |||| || ||||||||| |||||||    
T  16953097 ctaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaa 16953032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 17061068 - 17061003
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || |||||| |||||| ||||| |||| || ||||||||| |||||||    
T  17061068 ctaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaa 17061003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 99; Significance: 2e-48; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 205738 - 205900
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatga 112  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| | |     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaaaaacatgatagtttagggacgg 205837  T
Q  113 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||||||| |||| || |||||  |||| |||||||||||||| ||| ||||    
T  205838 ttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaa 205900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 205115 - 205031
Alignment:
Q  24 taggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttagg 107  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  205115 taggtctaaaacttccatttctctgtgtttctagagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg 205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 205544 - 205461
Alignment:
Q  24 taggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttagg 107  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||| |||||| |||||| ||||||    
T  205544 taggtctaaaactgccatttctctgtgattctagagttgaaaataggaggttggactaaaactacaaaaaaatgatagtttagg 205461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 210784 - 210870
Alignment:
Q  89 aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||| |||||| |||||| | | ||||||||||||||||||| |||| || ||||| ||||| |||||||||||||| ||||||||    
T  210784 aaaaaaatgatagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaa 210870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 64478 - 64387
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||| ||| |||| ||||| ||| |||||||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataatt 64387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 1e-46; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 36701466 - 36701629
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| |||    
T  36701466 agcatatggggtaggtctaaaactgccatttctatgtgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagggatg 36701565  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||||||||  ||  || |||||  |||||||||||||||| || ||||||||    
T  36701566 attttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaa 36701629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 27200062 - 27200212
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| | |    
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagg-acg 27200160  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     | ||||||||||||||||| ||||||| |||||  ||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatg 27200212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 2323538 - 2323391
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttga 127  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||| ||| |||||||||||||||    
T  2323538 ctaaaactgtcatttatccgtgtttctggagttgaaaataggaggtaggactaaaattgcaaaaaacatgatagtttagg-atggttttgttcgatttga 2323440  T
Q  128 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 176  Q
    |||| |||| | ||||||| ||| |||||||||||| || ||| |||||    
T  2323439 aagaggcagtataatttttgtgaactggtcaaaatgcgaggacaaaaaa 2323391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 55192293 - 55192143
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||| |||| | | |    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaactacaaaaaacat-atagtttatggacg 55192195  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||||||| ||||||||||| ||   || |||||  ||||||||||||||||    
T  55192194 gttttgtttgatttgaaagaggcgagaccattttcgtgagctggtcaaaatg 55192143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 49407972 - 49407809
Alignment:
Q  12 tagcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtat 110  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||| | ||||||| | | |||||| |     
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggagttgaaaataggaggtatgactaaaactgtacaaaacat-aaagtttagggac 49407874  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    | |||||||| |||||||||| |||  || |||||  |||||||||||||||| || ||||||||    
T  49407873 ggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaa 49407809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 50900898 - 50901060
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||||||||||| ||||||||||  |||||| || |||| ||||||||||||||||||||||||| |||||||| |||||||| ||| |||||| | |    
T  50900898 agcatagggggtagatctaaaactgcaatttctttgcgtttatggagttgaaaataggaggtaggacaaaaactgcaaaaaacat-atagtttagggacg 50900996  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     |||||||||||||| |||| ||||  | |||||| |||||||||||||||| || ||||||||    
T  50900997 gttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaa 50901060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 37847190 - 37847308
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatga 112  Q
    ||||||| ||||| |||||||| |||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||| | |     
T  37847190 agcatagtgggtaagtctaaaattgtcatttctctgcatttctgaagttgaaaataggagataggactaaaactgcaaaaacatgatagtttagggacgg 37847289  T
Q  113 ttttgttcgatttgaaaga 131  Q
     ||||||||||||||||||    
T  37847290 ctttgttcgatttgaaaga 37847308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 37075864 - 37075711
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca----aaaacatgataatttaggt 108  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||    ||||||| ||| ||||||     
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggagttgaaaataagaggtaggactaaaactgcaaaaaaaaacat-atagtttaggg 37075766  T
Q  109 atgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    | |  |||||| ||||||||||| |||| || |||||  |||| |||||||||||    
T  37075765 acgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatg 37075711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 27199878 - 27199714
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa--catgataatttaggtat 110  Q
    |||||||||||||||||||||||||  |||| |||| |||||| ||||||||||||||| |||| ||||||||||||||||  ||| ||| |||||  |     
T  27199878 agcatagggggtaggtctaaaactgatatttatctgcgtttctagagttgaaaataggatgtagcactaaaactgcaaaaaaacat-atagtttagtgac 27199780  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 176  Q
    | ||||||||||||||||||| |||  || |||||  |||||||||||||||| || |||||||||    
T  27199779 ggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaa 27199714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 50900692 - 50900545
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||  |||||||||||| |||||| | | ||||||||||||||    
T  50900692 ctaaaactgtcatttctctatgtttctagagttgaaaatagaaggtaggactaaaactgcgaaaaaacatgatagtttagg-acggttttgttcgatttg 50900594  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||   || || |||||  ||||||| ||||||| ||| ||||||||    
T  50900593 aaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaaa 50900545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 8874063 - 8874205
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa---catgataatttaggtatgatttt 116  Q
    |||||| ||||||||||||||||||| || |||||||||||||||||||| |||||| ||||||||||||||||   ||| ||| |||||| | | ||||    
T  8874063 ggggtaagtctaaaactgtcatttct-tgcgtttctggagttgaaaatagaaggtagaactaaaactgcaaaaaaaacat-atagtttagggaaggtttt 8874160  T
Q  117 gttcgatttgaaagaagcagaacaatttttatgagctggtcaaaa 161  Q
    ||||||||| |||||||||| || |||||  ||||||||||||||    
T  8874161 gttcgatttaaaagaagcaggaccattttcgtgagctggtcaaaa 8874205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 43222566 - 43222402
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaa-taggaggtaggactaaaactgcaaaaa-catgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | |  ||||||||||||||||| |||| ||||||| ||||| |||||||| ||| ||| |||||| |     
T  43222566 agcataggtggttggactaaaactgtcatttttgtacgtttctggagttgaaaaatagggggtaggattaaaaatgcaaaaaacat-atagtttagggac 43222468  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 176  Q
    ||||||||||||||| |||||  || ||| |||||  |||| ||||||||||||||||||||||||    
T  43222467 gattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaa 43222402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 49408163 - 49408302
Alignment:
Q  23 gtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttc 120  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||  |||||||||||||||||||  |||||||||||| |||||| |   ||||||||    
T  49408163 gtaggtctaaaactgccatttctttgcgtttctggagttgaaaat--gaggtaggactaaaactgcaaaaaaacatgatagtttagg-acagttttgttc 49408259  T
Q  121 gatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    |||||||||||  || ||| |||||  |||| |||||||||||    
T  49408260 gatttgaaagagacacaaccattttcgtgagatggtcaaaatg 49408302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 52237203 - 52237350
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || ||||| ||||||  ||||||| || |||||||||||||||||||| ||| |||||||||| | |||||||||||||||     
T  52237203 ctaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttcgattta 52237301  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||| | || || |||||  |||| |||||||||||||| ||||||||    
T  52237302 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaa 52237350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 25535067 - 25534903
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataattta-ggta 109  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| ||||||||||||||| |||||||| |||||||| || |    
T  25535067 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-ataatttagggga 25534969  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||||||||||||||| ||||| | || || ||||| ||||  ||||||||||| || ||||||||    
T  25534968 cgattttgttcgatttaaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaa 25534903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 8873850 - 8873786
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  8873850 ctaaaactgtcatttctctgcgtttctgaagttgaaaataggaggtaagactaaaactgcaaaaa 8873786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 36701284 - 36701163
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactg---caaaaacatgataatttaggta 109  Q
    |||||| || |||||||||||| |||||||| |||| |||||||||||||||||||||||| |  |||||||| |    |||||||||||| |||| | |    
T  36701284 agcatacggcgtaggtctaaaattgtcatttatctgcgtttctggagttgaaaataggagggataactaaaaccgtaaaaaaaacatgatagtttatgga 36701185  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     |||||||||||||||||||||    
T  36701184 cgattttgttcgatttgaaaga 36701163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 33412383 - 33412457
Alignment:
Q  19 gggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||||||| ||||||||||| ||||||  |  |||||||||||||||||||||||||||||||||    
T  33412383 gggggtaggtctaaaactatcatttctctgcgtttctaaaaatgaaaataggaggtaggactaaaactgcaaaaa 33412457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 50662782 - 50662895
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||||||||| |||| ||||||||||||||| |||||||| ||| |||| | |     
T  50662782 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgcaaaaaacat-atagtttaaggac 50662880  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  50662881 gattttgttcgattt 50662895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 40839038 - 40839185
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||| ||||||||||||||| |||||||| ||| |||||| | |||||||||||||||     
T  40839038 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 40839136  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||| | |  || |||||  |||| | |||||||||||| ||||||||    
T  40839137 aaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaa 40839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 51828133 - 51828014
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| ||||||||||| ||| |||||||| ||| |||||| |     
T  51828133 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaacat-atagtttagggac 51828035  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  51828034 gattttgttcgatttaaaaga 51828014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 52236976 - 52236873
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || ||||||||||||||||||||| || || |||||||||||| |||||||| ||| |||||| | |||||||||||||||     
T  52236976 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 52236878  T
Q  127 aaaga 131  Q
    |||||    
T  52236877 aaaga 52236873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 40275255 - 40275106
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgat--aatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||| |||||||||||||||||||| |  ||  | |||||| |  ||||||||||||||    
T  40275255 ctaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgattt 40275156  T
Q  126 gaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||||| | || || |||||  |||| |||||||||||||| ||||||||    
T  40275155 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaa 40275106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 55389783 - 55389618
Alignment:
Q  11 gtagcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggt 108  Q
    |||||||||| ||| |  ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||| |     
T  55389783 gtagcataggtggttgaactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaagg 55389685  T
Q  109 atgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    | ||||||||||||||| ||| | | || || |||||  |||| ||||| ||||| || ||||||||    
T  55389684 acgattttgttcgatttaaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaa 55389618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 37076060 - 37076208
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaa-taggaggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||| |||||||||  |||||| ||||| |||| ||| ||||| |||||||| || ||||| ||||||| |||||| | ||||||||||||||||    
T  37076060 ctaaaactgccatttctctacgtttctagagttaaaaaatagaaggtaagactaaaaatgtaaaaaacatgatagtttagg-acgattttgttcgatttg 37076158  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 176  Q
    ||||| || | || |||||  ||||||| |||||||| || |||||||||    
T  37076159 aaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaa 37076208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 5137365 - 5137441
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||| ||| |||||||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataatt 5137441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 26837521 - 26837445
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 26837445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 37727314 - 37727390
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 37727390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 40275464 - 40275626
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||||| || || |||||||||||| |||||||| ||| |||||  |     
T  40275464 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacat-atagtttagagac 40275562  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||| ||||| | || || | |||  |||| |||||||||||||| ||||||||    
T  40275563 gattttgttcgatttaaaagaggtaggacca-tttcgtgagttggtcaaaatgtgaggaccaaaa 40275626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 46013598 - 46013479
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||| ||||||| | || ||||||||||||||||||| |||| || |||||||||||| |||||||| ||| |||||| |     
T  46013598 agcataggtggttggactaaaaccgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacat-atactttagggac 46013500  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  46013499 gattttgttcgatttaaaaga 46013479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 5137156 - 5137065
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 5137065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 37727105 - 37727014
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 37727014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 41046876 - 41046785
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 41046785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 49720547 - 49720428
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||||||||| | || |||||||||||| ||||  ||||| ||||||||||||||||||||    ||| |||||| | |    
T  49720547 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaacgtatactttagggacg 49720448  T
Q  112 attttgttcgatttgaaaga 131  Q
    |||||||||||||| |||||    
T  49720447 attttgttcgatttaaaaga 49720428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 31778814 - 31778752
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| |||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 31778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 43222775 - 43222923
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaa-taggaggtaggactaaaactgcaaaaacatgataa--tttaggtatgattttgttcgattt 125  Q
    ||||||||||||||| | || ||||||||||||||||| |||| ||| |||||||||||||||||| |  ||||  |||||| | |||||||||||||||    
T  43222775 ctaaaactgtcatttttgtgcgtttctggagttgaaaaatagggggtgggactaaaactgcaaaaaaac-ataaagtttagggacgattttgttcgattt 43222873  T
Q  126 gaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||||| |||  || |||||  || ||| ||||||||| || ||||||||    
T  43222874 aaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaa 43222923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 46013792 - 46013944
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||||| || ||||||||||||||||||||  ||| ||| |||| | |    
T  46013792 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 46013890  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||||||||||||||| ||| |   ||||| ||||||  ||| |||||||||||    
T  46013891 cgattttgttcgatttaaaaaagatagaaccatttttgggagttggtcaaaatg 46013944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 51473029 - 51472880
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatga 112  Q
    |||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||||| |  |    
T  51473029 cataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atactttagggacaa 51472931  T
Q  113 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||| ||||| ||||| | || | || ||| ||||| |||||||||||    
T  51472930 ttttgtttgatttaaaagaggtaggaaaaatttcatgagttggtcaaaatg 51472880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 24300925 - 24301002
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| |||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 24301002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 39555946 - 39556023
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| |||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 39556023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 47431873 - 47431792
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||  ||||| |||| ||||||||||||||||||||    
T  47431873 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaa 47431792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 49951916 - 49951997
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| || |||||||||||||||||    
T  49951916 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaa 49951997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 51828343 - 51828408
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  51828343 ctaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 51828408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 55389967 - 55390048
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||||||||||||||||| ||||||    
T  55389967 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaa 55390048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 22424975 - 22424899
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 22424899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 24300717 - 24300641
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||| ||||| ||| |||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataatt 24300641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 32535120 - 32535044
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  32535120 ctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 32535044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 34105018 - 34105139
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgc---aaaaacatgataatttaggt 108  Q
    |||||||| ||| || ||||||||||||||||| || ||||||| ||||| |||| ||||| | |||||||||||||   |||||||| ||| ||||||     
T  34105018 agcataggtggttggactaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacat-atagtttaggg 34105116  T
Q  109 atgattttgttcgatttgaaaga 131  Q
    | ||||||||||||||| |||||    
T  34105117 acgattttgttcgatttaaaaga 34105139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 39555739 - 39555663
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| || |||| ||||| ||| |||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataatt 39555663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 41047083 - 41047159
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 41047159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 43973824 - 43973900
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagt-tgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||| |||| ||||| ||| |||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 43973900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 52375717 - 52375864
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggag-gtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || ||||||||||||| ||||||| |  || |||||||||||| |||||||| ||| |||| | | |||||||||| ||||     
T  52375717 ctaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaacat-atagtttatggacgattttgttcaattta 52375815  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||| | || || |||||  |||| ||||||||||| || ||||||||    
T  52375816 aaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaa 52375864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 174
Target Start/End: Original strand, 330206 - 330368
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| ||  |||||||||||||||| || |||||| |||||| ||||| |||| || |||||||||||| |||||||| ||| |||||| |     
T  330206 agcataggtggttggattaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacat-atagtttagggac 330304  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaa 174  Q
    ||||||||| ||||| ||| | | || || |||||  |||| ||||||||||| || |||||||    
T  330305 gattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaa 330368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 25853596 - 25853687
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 25853687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 29801798 - 29801876
Alignment:
Q  27 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||| |||| |||| ||||| ||| |||||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataatt 29801876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 40838825 - 40838747
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggactaaaactgcaaaaa 93  Q
    ||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || || |||||||||||||||||    
T  40838825 ataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaa 40838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 44676858 - 44676955
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||| | || |||||||||||||||||||| ||| ||||||||||| ||| |||||||| ||| |||| | | |||||||||||||||    
T  44676858 ctaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 44676955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 51828700 - 51828596
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||| | || ||||||||||||| ||||||| || ||||||||||||||||||||  ||| ||| |||| | | |||||||||||||||    
T  51828700 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttacggacgattttgttcgattt 51828602  T
Q  126 gaaaga 131  Q
     |||||    
T  51828601 aaaaga 51828596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 14654577 - 14654642
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||| | || ||||||||||||| |||| ||||| ||||||||||||||||||||    
T  14654577 ctaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaa 14654642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 20840734 - 20840645
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||| ||||  ||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 20840645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 32730759 - 32730840
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||  ||||| |||| ||||| ||||||||||||||    
T  32730759 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaa 32730840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 51473225 - 51473306
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | || |||| |||||||| ||||| |||| ||||||||||||||||||||    
T  51473225 agcataggtggttggactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaa 51473306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 4275748 - 4275824
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| |||||||||| |||| ||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 4275824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 17464652 - 17464576
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||| |  |||||||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 17464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 20840945 - 20841021
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| |||||||||| |||| ||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 20841021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 25853395 - 25853319
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||| || |||| ||||| ||| |||||||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataatt 25853319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 27393822 - 27393746
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||| | ||||||||||| |||||||| |||| ||||| ||| |||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataatt 27393746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 30098147 - 30098223
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||| |||||| ||||||| |||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 30098223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 30104657 - 30104617
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgttt 53  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgttt 30104617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 34104813 - 34104733
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || |||||| |||||||| | || |||||||||| || ||||||||| || |||||||||||||||||    
T  34104813 agcataggtggttggactaaaaatgtcatttttgtgcgtttctggagctggaaataggagatatgactaaaactgcaaaaa 34104733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 38535681 - 38535784
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    |||||||||| |||| | || ||||||||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||||| | |||||| ||||||||     
T  38535681 ctaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 38535779  T
Q  127 aaaga 131  Q
    |||||    
T  38535780 aaaga 38535784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 44676632 - 44676529
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || |||||| |||||| ||||| |||| |||||||||| |||| |||||||| ||| |||||| | | |||||||||||||     
T  44676632 ctaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaacat-atagtttagggacggttttgttcgattta 44676534  T
Q  127 aaaga 131  Q
    |||||    
T  44676533 aaaga 44676529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 52375487 - 52375384
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||| ||| ||||||||||| |||||||| ||| |||||| | |||||||||| ||||     
T  52375487 ctaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaacat-atagtttagggacgattttgttcaattta 52375389  T
Q  127 aaaga 131  Q
    |||||    
T  52375388 aaaga 52375384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 23644638 - 23644547
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 23644547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 26274936 - 26274971
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctg 48  Q
    ||||||||||||||||||||||||||||||||||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctg 26274971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 2044445 - 2044296
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa-catgataatttaggtatga 112  Q
    |||||| ||| || |||||||||| |||| | || |||||| |||||| ||||||| || || |||||||||| |||||| ||| |||||||| | | ||    
T  2044445 cataggtggttggactaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaactccaaaaaacat-ataatttatggacga 2044347  T
Q  113 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||||||| ||||| | |  || ||||| ||||| |||||||||||    
T  2044346 ttttgttcgatttaaaagaggtatgaccattttcatgagttggtcaaaatg 2044296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 22370757 - 22370609
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgca--aaaacatgataatttaggtatgattttgttcgattt 125  Q
    |||||||||| |||||| || ||||||||||||| | ||| |||| ||||||||||||||||  ||||||| ||| |||||| | ||||||||| | |||    
T  22370757 ctaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacat-atagtttagggacgattttgtttggttt 22370659  T
Q  126 gaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||| | | || || |||||  |||| ||||||||||| || ||||||||    
T  22370658 aaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaa 22370609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 43678471 - 43678358
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || | ||||||||||| ||||| |||| || |||||||||||| |||||||| ||| |||| | |     
T  43678471 agcataggtggttggactaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggac 43678373  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  43678372 gattttgttcgattt 43678358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 26837725 - 26837802
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    ||||||||||||| ||||||||||||||||||||||  ||| |||||   ||||| || |||||||| |||| |||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaa 26837802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 41998406 - 41998325
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| |  |||| |||||||| ||||| |||| || |||||||||||||||||    
T  41998406 agcataggtggttggactaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaa 41998325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 51828910 - 51828991
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | || |||| || ||||| ||||| |||| ||||||||||||||||||||    
T  51828910 agcataggtggttggactaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaa 51828991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 12141076 - 12140994
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactg--caaaaacatgataatttaggtatgattttgttcgatttgaaaga 131  Q
    |||| ||||| |||||||||| ||||||||||||||||   |||||||||||| |||||| | | |||| ||||||||||||||    
T  12141076 gtttttggaggtgaaaatagggggtaggactaaaactgaaaaaaaacatgatagtttagggacg-ttttcttcgatttgaaaga 12140994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 23644849 - 23644925
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| ||| || ||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataatt 23644925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 26274728 - 26274652
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||||| ||| |||| ||||| ||| |||||||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataatt 26274652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 12141113 - 12141180
Alignment:
Q  65 aataggaggtaggactaaaactgcaaaa-acatgataatttaggtatgattttgttcgatttgaaaga 131  Q
    |||||| |||| || ||||||||||||| |||||||| |||||  ||| |||||||||||||||||||    
T  12141113 aatagggggtaagattaaaactgcaaaaaacatgatagtttagagatggttttgttcgatttgaaaga 12141180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 17464860 - 17464895
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctg 48  Q
    |||||||||| |||||||||||||||||||||||||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctg 17464895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 31779021 - 31779112
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||| ||||||||||| |||||||||| |||| |||||   ||||| || ||| |||| |||| ||||| ||| |||||||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataatt 31779112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 41998636 - 41998679
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||| ||||||||||||||  |||||||||||||||||||||    
T  41998636 gtttctagagttgaaaatagggagtaggactaaaactgcaaaaa 41998679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 27393946 - 27393992
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||| ||||||||||||||||||| ||||||||| |||| |||||    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggag 27393992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 38535469 - 38535372
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||| | || |||| |||||||| ||||| |||| ||||||| ||||||| |||||||| ||| |||| | | |||||||||||||||    
T  38535469 ctaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 38535372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 2051475 - 2051394
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||  ||||| |||  ||||| ||||||||||||||    
T  2051475 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaa 2051394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 33412614 - 33412687
Alignment:
Q  102 tttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||| | |||||||||||||| ||||||  |||||| |||||  ||||||| |||||||| || ||||||||    
T  33412614 tttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaa 33412687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 1e-43; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 35163557 - 35163708
Alignment:
Q  14 gcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc---aaaaacatgataatttaggtat 110  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||| ||| |||||| |     
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaacat-atagtttagggac 35163655  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||| ||||||||||| ||||||| |||||  ||||||||||||||||    
T  35163656 gattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatg 35163708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 32836163 - 32836032
Alignment:
Q  27 gtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    |||||||||| |||||| | | ||||||||||||||    
T  32836163 gtctaaaactgtcatttctctgtgtttcaggagttgaaaataggaggtagaactaaaact----aaacatgatagtttagg-acggttttgttcgatttg 32836069  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||| |||| ||  ||||| ||||||||||||||||    
T  32836068 aaagaggcaggaccgtttttgtgagctggtcaaaatg 32836032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 32836367 - 32836517
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||| ||||||||||||||||||| ||||||||  ||||||| |||||||||||| |||||||||||||||||| |||||||| | | |||| | | |    
T  32836367 agcataaggggtaggtctaaaactgttatttctcttcgtttctgaagttgaaaatagaaggtaggactaaaactgcaaaaaacat-acagtttaagaacg 32836465  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||||||||||||||||||| |||  || |||||  ||||||||||||||||    
T  32836466 gttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatg 32836517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 11523824 - 11523721
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgca--aaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaattttta 147  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||||||||| |||||| | | ||||||| ||||||||||||||| ||| |||||||    
T  11523824 gtttatggagttgaaaatatgaggtaggactaaaactgcaaaaaaacatgatagtttagggacggttttgtttgatttgaaagaagcataaccattttta 11523725  T
Q  148 tgag 151  Q
    ||||    
T  11523724 tgag 11523721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 10900109 - 10900024
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 10900024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 35163312 - 35163209
Alignment:
Q  60 ttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtca 158  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| | | |||||||||||||||||||  ||  || |||||| |||||||||||    
T  35163312 ttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acggttttgttcgatttgaaagagacaagaccatttttgtgagctggtca 35163214  T
Q  159 aaatg 163  Q
    |||||    
T  35163213 aaatg 35163209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 33095853 - 33095771
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatgattttgttcgatttgaaaga 131  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| | | |||||||||||||||||||    
T  33095853 gtttttggaggtgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagggacggttttgttcgatttgaaaga 33095771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 835532 - 835407
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatg 149  Q
    |||| ||||| |||||||||| |||||||||||| ||||||||| |||||| |||||| |   ||||||||||||||||||| |||  || |||||  ||    
T  835532 gtttttggaggtgaaaatagggggtaggactaaagctgcaaaaaaatgatagtttagggacagttttgttcgatttgaaagaggcaagaccattttcgtg 835433  T
Q  150 agctggtcaaaatgtgatgaccaaaa 175  Q
    ||||| | ||||||||| ||||||||    
T  835432 agctgctaaaaatgtgaggaccaaaa 835407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 31073512 - 31073631
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgca-aaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| |||||||||||||||| ||||||| ||| |||||| |     
T  31073512 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcacaaaacat-atagtttagggac 31073610  T
Q  111 gattttgttcgatttgaaaga 131  Q
     |||||||||||||| |||||    
T  31073611 aattttgttcgatttaaaaga 31073631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 5114628 - 5114531
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||| | | |||||||||||||||    
T  5114628 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 5114531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 31573901 - 31573820
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  31573901 agcataggtggttggactaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 31573820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 31574095 - 31574214
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || |||||| |||||||| | || ||||||||||||||||||| |||| || |||||||||||| |||||||| ||| |||||| |     
T  31574095 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacat-atagtttagggac 31574193  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  31574194 gattttgttcgatttaaaaga 31574214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 5120856 - 5120958
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttga 127  Q
    |||||||||||||||| || |||| |||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||||| | ||||||||||||||| |    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaa 5120954  T
Q  128 aaga 131  Q
    ||||    
T  5120955 aaga 5120958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 10900299 - 10900390
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 10900390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 11276760 - 11276695
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaa 84  Q
    |||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaa 11276695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 12935528 - 12935597
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||| ||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaa 12935597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 20741276 - 20741199
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| |||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 20741199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 20741485 - 20741550
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaa 20741550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 25472382 - 25472463
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || |||||||||| || ||||| |||| ||||||||||||||||||||    
T  25472382 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaa 25472463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 28636566 - 28636647
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| || |||||||||||||||||    
T  28636566 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaa 28636647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 11445163 - 11445123
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgttt 53  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgttt 11445123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 11445371 - 11445447
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 11445447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 12935318 - 12935242
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 12935242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 22219737 - 22219813
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| || |||| ||||| ||| |||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataatt 22219813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 25469027 - 25468906
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc---aaaaacatgataatttaggt 108  Q
    |||||||| ||| ||  |||||||||||||||| || ||||||||| || |||||| |||| |||||||||||||||   |||||||| ||| ||||||     
T  25469027 agcataggtggttggaataaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaacat-atagtttaggg 25468929  T
Q  109 atgattttgttcgatttgaaaga 131  Q
    | ||||||||||||||| |||||    
T  25468928 acgattttgttcgatttaaaaga 25468906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 11276951 - 11277042
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 11277042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 15828010 - 15828101
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 15828101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 22534208 - 22534165
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  22534208 gtttttggagttgaaaataggaggtaggactaaaactgcaaaaa 22534165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 28472812 - 28472722
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataatt 28472722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 29860001 - 29859911
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataatt 29859911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 29891453 - 29891531
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||| ||| || |||||||| |||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  29891453 ataggtggttggactaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 29891531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 31470476 - 31470414
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||| |||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 31470414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 2322588 - 2322628
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgttt 53  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgttt 2322628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 18257313 - 18257222
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||| ||| |||| ||||| ||| |||||||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataatt 18257222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 28636425 - 28636347
Alignment:
Q  55 tggagttgaaaatagg-aggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaag 133  Q
    |||||||| ||||||| || || |||||||||||||||||||| ||| |||||| | ||||||||||||||| |||||||    
T  28636425 tggagttggaaatagggagatatgactaaaactgcaaaaacat-atagtttaggaacgattttgttcgatttaaaagaag 28636347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 1149802 - 1149840
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgttt 53  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttt 1149840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 15827794 - 15827739
Alignment:
Q  36 tgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||| |||| |||||||||||| |||||||||||||||||| |||| |||||    
T  15827794 tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 15827739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 31470685 - 31470776
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||| ||||||| ||||||| ||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 31470776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 24640555 - 24640668
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||| ||||||||||||| || ||||  ||||||| ||||| |||| || |||||||||||| |||||||| ||| |||| | |     
T  24640555 agcataggtggttggactagaactgtcatttctgtgcgttttcggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggac 24640653  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  24640654 gattttgttcgattt 24640668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 30251064 - 30251142
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||| ||| || ||||| ||||||||||| || ||||||||||||| ||||| |||| || |||||||||| ||||||    
T  30251064 ataggtggttggactaaatctgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactacaaaaa 30251142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 29891256 - 29891199
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg 70  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| |||||||    
T  29891256 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagg 29891199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 3e-41; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 13 - 174
Target Start/End: Complemental strand, 35193483 - 35193322
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatg 111  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| ||||||| ||| |||||| | |    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgtttctgaagttgaaaataggagataggactaaaactgcaaaaaacat-atagtttagggacg 35193385  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaa 174  Q
    |||||||||||||||||||| | || || |||||  ||||||| |||||||| || |||||||    
T  35193384 attttgttcgatttgaaagaggtaggaccattttcgtgagctgatcaaaatgcgaggaccaaa 35193322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 17504149 - 17503989
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatg 111  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |    
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acg 17504051  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaa 173  Q
     || ||||| |||||||||| |||| || |||||  |||| ||||||||||| || ||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaa 17503989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 40160269 - 40160119
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatg 111  Q
    ||||||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| | |    
T  40160269 agcatagggggtaggtctaaaactgtcatttctccatgtttatagagttgaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacg 40160171  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||||||||||||| ||||| |||  || |||||  ||||||||| ||||||    
T  40160170 gttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatg 40160119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 229545 - 229692
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttga 127  Q
    |||||| ||||| |||| || ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| | | ||||||||| |||||||    
T  229545 ctaaaattgtcacttctgtgcgtttctggagttgaaaataaggaggtaggattaaaactgcaaaaacatgatagtttaaggacgattttgtttgatttga 229644  T
Q  128 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||| |||  || |||||  |||||||||||||||| || ||||||||    
T  229645 aagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaa 229692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 18965300 - 18965197
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttga 127  Q
    ||||||||||||||| | || |||||| |||||||||||| |||||||| ||||||||||||||||||||||| |||| | | |||||||||||||||||    
T  18965300 ctaaaactgtcatttatatgcgtttctagagttgaaaataaggaggtagaactaaaactgcaaaaacatgatagtttaaggacgattttgttcgatttga 18965201  T
Q  128 aaga 131  Q
    ||||    
T  18965200 aaga 18965197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 17504329 - 17504410
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttg-aaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||||||| ||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaaaaa 17504410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 24336144 - 24336284
Alignment:
Q  24 taggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaa-acatgataatttaggtatgattttgttcga 122  Q
    |||| ||||| ||| ||||||| |  ||||||||||||||||||| | |||||||||||||  |||||| ||||||||||||||| | | ||||||||||    
T  24336144 taggactaaagctgccatttctatacgtttctggagttgaaaatatggggtaggactaaaagagcaaaaaacatgataatttaggaacggttttgttcga 24336243  T
Q  123 tttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||| |||| || |||||  |||||| |||||||||    
T  24336244 tttgaaagaggcaggaccattttcgtgagcttgtcaaaatg 24336284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 24335920 - 24335786
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaa 128  Q
    |||||||||||||| | || |||| ||||||||||||||||  |||||||||||||| | |||||||||||| || || || | ||||||||||||||||    
T  24335920 taaaactgtcatttatgtgcgtttttggagttgaaaatagggtgtaggactaaaactccaaaaaacatgatagttcagatacggttttgttcgatttgaa 24335821  T
Q  129 agaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||| |||  || |||||  ||||||||||||||||    
T  24335820 agaggcatgaccattttcgtgagctggtcaaaatg 24335786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 41 - 176
Target Start/End: Original strand, 40160489 - 40160624
Alignment:
Q  41 tttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaac 139  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| | | |||||||| |||||||||| |||  ||    
T  40160489 tttctctacgtttctggagttgaaaataggaggtaagactaaaactgcaaaaaacatgatagtttagg-acggttttgttcaatttgaaagaggcatgac 40160587  T
Q  140 aatttttatgagctggtcaaaatgtgatgaccaaaaa 176  Q
     |||||  |||| |||||||||||  | |||||||||    
T  40160588 tattttcgtgagttggtcaaaatgcaaggaccaaaaa 40160624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 229337 - 229174
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggag-gtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || |||||||||||| || | || |||| |||||||||||||| | | |||| ||||||||||||||||||||||| |||| | | |    
T  229337 agcataggtggttggactaaaactgtcacttttgtgcgtttatggagttgaaaataagggagtagaactaaaactgcaaaaacatgatagtttaaggacg 229238  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||| |||||||||| |||  || |||||   ||||||||||||||  || ||||||||    
T  229237 attttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaa 229174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 34807293 - 34807173
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc--aaaaacatgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| |||||||||||||||  |||||||| ||| |||||| |    
T  34807293 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacat-atactttaggga 34807195  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  34807194 cgattttgttcgatttaaaaga 34807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 35193702 - 35193823
Alignment:
Q  42 ttctctgtgtttctggagttgaaaataggaggtaggactaaaac-tgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaaca 140  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| |  |||||||||||| |||||| | | ||||||| ||||||||||| |||| ||     
T  35193702 ttctctgcgtttctggagttgaaaataggaggtatgactaaaacatcaaaaaacatgatagtttagg-acggttttgttagatttgaaagaggcaggacc 35193800  T
Q  141 atttttatgagctggtcaaaatg 163  Q
    |||||  ||||||  ||||||||    
T  35193801 attttcgtgagcttatcaaaatg 35193823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 46193568 - 46193490
Alignment:
Q  27 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 46193490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 14440004 - 14439923
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  14440004 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 14439923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 46737024 - 46737144
Alignment:
Q  12 tagcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgc-aaaaacatgataatttaggta 109  Q
    ||||||||| ||| || ||||||||||||||||| || ||||||||||||| | ||||| || || |||||||||||| |||||||| ||| |||||| |    
T  46737024 tagcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaacat-atagtttaggga 46737122  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  46737123 cgattttgttcgatttaaaaga 46737144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 18965522 - 18965614
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggag-gtaggactaaaactgcaaaaacatgataatttaggtatgattttgttc 120  Q
    ||||||||||||||| | || |||| |||||||||||||||| | ||| |||||||||| ||||||||||||| |||||| | ||||||||||    
T  18965522 ctaaaactgtcatttatgtgcgtttatggagttgaaaataggggagtatgactaaaactacaaaaacatgatagtttaggaacgattttgttc 18965614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 28465257 - 28465138
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| || |||||||||||| |||||||| ||| |||| | |     
T  28465257 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacat-atagtttaaggac 28465159  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  28465158 gattttgttcgatttaaaaga 28465138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 33690001 - 33689854
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatgatt 114  Q
    ||||| ||| || |||| |||||||||| | || ||||||||||||| ||||| |||| || |||||||||||||||||||| ||| |||| | | ||||    
T  33690001 ataggtggttggactaacactgtcatttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgcaaaaacat-atagtttaaggacgatt 33689903  T
Q  115 ttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||||| ||||| | || || | |||| |||| |||||||||||    
T  33689902 ttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatg 33689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 54440745 - 54440628
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||||||||||| ||  |||||| ||||||||||| |||| |||||||||||||||||||  |  ||| |||||| | |    
T  54440745 agcataggtggttggactaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaa--aacatagtttagggacg 54440648  T
Q  112 attttgttcgatttgaaaga 131  Q
    |||||||||||||| |||||    
T  54440647 attttgttcgatttaaaaga 54440628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 14440198 - 14440311
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || |||||| |||||| ||||| |||| || |||||||||||| |||||||| ||| |||| | ||    
T  14440198 agcataggtggttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacat-atagtttaaggat 14440296  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  14440297 gattttgttcgattt 14440311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 23986635 - 23986533
Alignment:
Q  74 taggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgacca 172  Q
    |||||||||||||||||||| ||||||| |||||| |   |||||||||||||||||||  ||  || |||||  ||||||||||||||||||| |||||    
T  23986635 taggactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggacca 23986536  T
Q  173 aaa 175  Q
    |||    
T  23986535 aaa 23986533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 48526565 - 48526627
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaa 48526627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 12593409 - 12593474
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||| || || ||||||||||||||||||| |||| ||||||||||||||||||||    
T  12593409 ctaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaa 12593474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 21034606 - 21034687
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | |||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  21034606 agcataggtggttggactaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaa 21034687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 35643743 - 35643662
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||||||||||||||||||||    
T  35643743 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgcaaaaa 35643662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 45838933 - 45838998
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || ||||||||||||| ||||||| || ||||||||||||||||||||    
T  45838933 ctaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaa 45838998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 11153307 - 11153231
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 11153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 12503597 - 12503521
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 12503521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 15523395 - 15523331
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaa 15523331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 20470895 - 20470971
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 20470971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 22434340 - 22434284
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaa 84  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 22434284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 45082808 - 45082884
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 45082884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 22170306 - 22170397
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||| |||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 22170397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 22434547 - 22434637
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataatt 22434637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 25938056 - 25938131
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  25938056 taaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataatt 25938131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 33109860 - 33109769
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 33109769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 45082606 - 45082516
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataatt 45082516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 51021180 - 51021255
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaacatgataatt 103  Q
    |||||| || |||||||||| |||||||||||| |||||||||||||||||| |||| ||||| || |||||||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaatgataatt 51021255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 12503805 - 12503851
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 12503851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 12593184 - 12593087
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| ||||| ||||| ||| |||||||| ||| |||| | | |||||||||||||||    
T  12593184 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 12593087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 19529030 - 19528926
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| || ||||| ||||||| ||||| |||| |||||||||||||||  |||||||| ||| |||||| | |||||| ||||||||    
T  19529030 ctaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttagggacgattttattcgattt 19528932  T
Q  126 gaaaga 131  Q
     |||||    
T  19528931 aaaaga 19528926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 24851851 - 24851955
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    |||||||| |||||||| || ||||||||||||| ||||||  || |||||||||||||||  |||||||| ||| |||||| | |||||||||||||||    
T  24851851 ctaaaactttcatttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaacat-atagtttagggacgattttgttcgattt 24851949  T
Q  126 gaaaga 131  Q
     |||||    
T  24851950 aaaaga 24851955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 34789752 - 34789872
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc--aaaaacatgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||| | || |||| |||||||| ||||| |||| |||||||||||||||  |||||||| ||| |||||| |    
T  34789752 agcataggtggttggactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaggga 34789850  T
Q  110 tgattttgttcgatttgaaaga 131  Q
      |||||||||||||| |||||    
T  34789851 caattttgttcgatttaaaaga 34789872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 6616849 - 6616768
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| |||||| ||||||||||||| || |||||||    
T  6616849 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagcaaaaa 6616768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 15523603 - 15523680
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    ||||||||||||||||||||||||||||||||| || |||| |||||   ||||| || |||||||| |||| |||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 15523680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 16214865 - 16214946
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || |||||||| |||||| | |||||||||||||||||||||||| || ||| | ||||||||||||||    
T  16214865 agcataggtggttggactaaaactatcatttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaa 16214946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 26974444 - 26974379
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| |||||||||||||| |||||    
T  26974444 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaa 26974379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 41608551 - 41608470
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || |||| || ||||| ||||| |||| ||||||||||||||||||||    
T  41608551 agcataggtggttggactaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaa 41608470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 46736815 - 46736750
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| ||||| |||| |||||||||    
T  46736815 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgcaaaaa 46736750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 56077695 - 56077807
Alignment:
Q  14 gcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    ||||||| ||| || ||||||||||||||| | || |||||| |||||| ||||| |||| ||||||||||||||| |||||||| ||| |||| | | |    
T  56077695 gcataggtggttggactaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacg 56077793  T
Q  112 attttgttcgattt 125  Q
    ||||||||||||||    
T  56077794 attttgttcgattt 56077807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 12234713 - 12234789
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||  ||||||| ||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 12234789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 25447408 - 25447332
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 25447332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 54995230 - 54995154
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||   ||||||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 54995154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 4219733 - 4219642
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||| ||||| ||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 4219642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 12234505 - 12234414
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||| ||||||||| ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 12234414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 24851639 - 24851560
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| || |||||||||||||||||    
T  24851639 cataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaa 24851560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 34807525 - 34807619
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactg-caaaaacatgataatttaggtatgattttgttcga 122  Q
    ||||||||||||||||| || |||| |||||||| ||||| |||| |||||||||||||| ||||||||| ||| |||| | | ||||||||||||    
T  34807525 ctaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgccaaaaacat-atagtttaaggacgattttgttcga 34807619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 46193774 - 46193865
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||| ||||||  |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataatt 46193865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 51020973 - 51020882
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||  |||| || ||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 51020882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 18751971 - 18752037
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggac 79  Q
    |||||||||||||||||||||||||| |||||||||  ||| |||||   |||||||| ||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggac 18752037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 25937846 - 25937800
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggag 25937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 34789558 - 34789445
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || |||||| |||||||| | || ||||||||||||  ||||| |||| ||||||||||||||| |||||||| ||| |||| | |     
T  34789558 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 34789460  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  34789459 gattttgttcgattt 34789445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 54440939 - 54441052
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||    || ||||||||||||| ||||||| || ||||||||||||||| |||||||| ||| |||| | |     
T  54440939 agcataggtggttggactaaaactgtcattgacgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 54441037  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  54441038 gattttgttcgattt 54441052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 41114335 - 41114254
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || |||||| |||||||||| || |||||| |||||| ||||||| || || |||||||||||||||||    
T  41114335 agcataggtggttggactaaaattgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaa 41114254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 2118454 - 2118378
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||  ||||||||| ||||||| |||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  2118454 ctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2118378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 4219943 - 4220019
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||| ||||||||| |||| || |||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 4220019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 28166163 - 28166099
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    ||||||| |||||||| || |||| || ||||||||||||| || ||||||||||||||||||||    
T  28166163 taaaactatcatttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaa 28166099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 38962195 - 38962279
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| |||| || ||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 38962279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 45838723 - 45838604
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgca-aaaacatgataatttaggtat 110  Q
    |||||||| ||| || | |||||| |||||||| || |||| || ||| | ||||||| || |||||||||||||||| ||||||| ||| |||||| |     
T  45838723 agcataggtggttggacaaaaactatcatttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 45838625  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  45838624 gattttgttcgatttaaaaga 45838604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 2118665 - 2118755
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataatt 2118755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 11153516 - 11153607
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||| |||||||||||| ||||||||| |||| |||||   ||||| |  |||||||| |||| ||||| ||| |||||||||    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataatt 11153607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 23494619 - 23494528
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||| | ||||||||||||||||||||||||||| || | |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataatt 23494528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 48526371 - 48526336
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctg 48  Q
    |||||||||||||| |||||||||||||||||||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctg 48526336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 18751760 - 18751698
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    ||||||||| ||||| |||| |||||||||| ||||||||||||||| |||| |||| |||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaa 18751698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 36168701 - 36168814
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || |||||||||| |||| | ||  ||| |||||||||||||| |||| |||||||||||| || |||||||| |||||||| | ||    
T  36168701 agcataggtggttggactaaaactgtgatttatgtgcatttatggagttgaaaatagggagataggactaaaaccgcaaaaaacat-ataatttaagaat 36168799  T
Q  111 gattttgttcgattt 125  Q
     ||||||||| ||||    
T  36168800 aattttgttctattt 36168814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 51309952 - 51310038
Alignment:
Q  89 aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||||||||| |||||| |   ||||||||||||||||||| |||  || |||||  ||||||||| |||||| || ||||||||    
T  51309952 aaaaacatgatagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaa 51310038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 6617070 - 6617151
Alignment:
Q  51 tttctggagttgaaaatagg-aggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaaga 131  Q
    |||||||||||| | ||||| || |||||||||||||||||||| |  ||| |||||| | |||||| |||||||| |||||    
T  6617070 tttctggagttggagatagggagataggactaaaactgcaaaaaaaatatagtttagggacgattttattcgatttaaaaga 6617151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 25447611 - 25447696
Alignment:
Q  19 gggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| ||||||||| |||| |||||   ||||| |  |||||||| |||| ||||| ||| |||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataatt 25447696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 2e-39; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 35579074 - 35578912
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatg 111  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||| ||||||||||| |||| | | |    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggagttgaaaataggatgtaggattaaaactgcaaaaaacatgatagtttatg-acg 35578976  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||||||||||||||||||  |||| || |||||| ||||||||||||||||  ||||||||||    
T  35578975 gttttgttcgatttgaaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaa 35578912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 34595158 - 34595305
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttga 127  Q
    ||||||||||||||||| || ||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||| | ||||||||||||||| |    
T  34595158 ctaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgcaaaaacatgatagtttagggacgattttgttcgatttaa 34595257  T
Q  128 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||| |||| || |||||  |||| |||||||||||||| ||||||||    
T  34595258 aagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaa 34595305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 9393894 - 9393761
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaa 128  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| | | ||||||||||||||||    
T  9393894 taaaactgtcatttcactgtgtttctggagttgaaaataggaggtaggactaaaacagcaaaaaacatgatagtttagg-acggttttgttcgatttgaa 9393796  T
Q  129 agaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||| |||  ||||||||  ||||||| ||||||||    
T  9393795 agaggcaagacaattttcgtgagctgatcaaaatg 9393761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 39136858 - 39136711
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattt 115  Q
    |||| |||||| |||||||||||||||| | |  ||||||||||||||||||  ||| ||||||||||| |||| |||||||||| |||||| | |||||    
T  39136858 atagagggtagatctaaaactgtcatttttgttagtttctggagttgaaaattagagttaggactaaaagtgcataaacatgatagtttagggacgattt 39136759  T
Q  116 tgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||||||||||  |||||| |||||  ||||||||||||||||    
T  39136758 tgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatg 39136711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 35579256 - 35579406
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||||||||||||||||||||||| ||||| ||| |||| | ||||||||||||||||||| |||||||||||| |||||||||||| |||||| | |    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagg-acg 35579354  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||||||| ||||||||||| ||| ||  |||||  ||||||| ||||||||    
T  35579355 gttttgtttgatttgaaagaggcataatcattttcgtgagctgatcaaaatg 35579406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 9394108 - 9394251
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgtt 119  Q
    |||||| ||||||||||||||||||| ||||||| || ||||| ||||||||| ||||||||||||||||||||    ||| |||||| | | |||||||    
T  9394108 ggggtaagtctaaaactgtcatttctttgtgtttttgaagttggaaataggagataggactaaaactgcaaaaaatatatagtttagggacggttttgtt 9394207  T
Q  120 cgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    |||||||||| | | || || |||||| ||||||||||||||||    
T  9394208 cgatttgaaaaaggtaggaccatttttgtgagctggtcaaaatg 9394251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 33880759 - 33880632
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgcaaaaac-atgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttat 148  Q
    ||||||| || |||||||| | ||||||||||||| ||||||||  ||||||||||||| | | ||||||||||||||||||| |||||||||||||| |    
T  33880759 gtttctgaaggtgaaaataaggggtaggactaaaagtgcaaaaaatatgataatttagggacggttttgttcgatttgaaagaggcagaacaatttttgt 33880660  T
Q  149 gagctggtcaaaatgtgatgaccaaaaa 176  Q
    ||||||||||||||  || |||||||||    
T  33880659 gagctggtcaaaatacgaggaccaaaaa 33880632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 34594758 - 34594647
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatga 112  Q
    |||||||| ||| || |||||||| |||||| | | ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  34594758 agcataggtggttggactaaaactatcatttatgtttgtttctcgagttgaaaatagggggtaggactaaaactgcaaaaacatgatagtttagggatga 34594659  T
Q  113 ttttgttcgatt 124  Q
    ||||||| ||||    
T  34594658 ttttgtttgatt 34594647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 4477860 - 4477726
Alignment:
Q  31 aaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaa 129  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| | |||||| ||| |||| |||    
T  4477860 aaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaaaaacatgatagtttagggacgattttattcaatttaaaa 4477761  T
Q  130 gaagcagaacaatttttatgagctggtcaaaatgt 164  Q
    || || | || |||||  |||  ||||||||||||    
T  4477760 gaggcgggaccattttcgtgaattggtcaaaatgt 4477726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 49064171 - 49064047
Alignment:
Q  51 tttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatga 150  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| | | |||||||||| |||||||||| |||  || |||||  |||    
T  49064171 tttctggagttgaaaataggagttaggactaaaagtgcaaaaacatgatagtttatggaagattttgttctatttgaaagaggcaataccattttcgtga 49064072  T
Q  151 gctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||  || ||||||||    
T  49064071 gctggtcaaaatacgaggaccaaaa 49064047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 32427397 - 32427470
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||| ||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgtttttagagttgaaaataggaggaaggactaaaactacaaaaa 32427470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 45815465 - 45815563
Alignment:
Q  42 ttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaac 139  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||||  |||||||||||| |||||| | ||||||||||||||| ||||| |||||||    
T  45815465 ttctctgcgtttctggagttgaaaataagaggtagaactaaaactgcaaaaaaacatgatagtttagg-acgattttgttcgatttaaaagaggcagaac 45815563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 25637568 - 25637681
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||| | |     
T  25637568 agcataggtggttggactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 25637666  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  25637667 gattttgttcgattt 25637681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 9181708 - 9181595
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| |||||||||||||||||||| |  ||| |||| | | |    
T  9181708 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacg 9181609  T
Q  112 attttgttcgattt 125  Q
    ||||||||||||||    
T  9181608 attttgttcgattt 9181595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 28687869 - 28687988
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || ||||||||||| ||| |||||||| ||| |||||| |     
T  28687869 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgcaaaaaacat-atagtttagggac 28687967  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  28687968 gattttgttcgatttaaaaga 28687988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 7732664 - 7732545
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || |||| |||||||||||||| |||| ||||||||||||||| |||||||| ||| |||| | |     
T  7732664 agcataggtggttggactaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 7732566  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  7732565 gattttgttcgatttaaaaga 7732545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 16081685 - 16081788
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||| | || |||| |||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||||| |||||||||||||||||     
T  16081685 ctaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggatgattttgttcgattta 16081783  T
Q  127 aaaga 131  Q
    |||||    
T  16081784 aaaga 16081788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 19590909 - 19590985
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 19590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 19830804 - 19830860
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaa 84  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggacaaaaa 19830860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 33880955 - 33881035
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||| || | ||||||||||||||| | || ||||||||||||||||||||| | || |||||||||||||||||    
T  33880955 agcataggggatatgactaaaactgtcatttatgtgcgtttctggagttgaaaataggggataagactaaaactgcaaaaa 33881035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 11973772 - 11973891
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||||||||||| || ||||||| ||||| ||||||| || ||| |||||||||||||||||    ||||||||| | |    
T  11973772 agcataggtggttggactaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgcaaaaaccatttaatttagggacg 11973871  T
Q  112 attttgttcgatttgaaaga 131  Q
    ||||||||| |||| |||||    
T  11973872 attttgttcaatttaaaaga 11973891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 19830596 - 19830505
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 19830505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 37786943 - 37786852
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 37786852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 26026478 - 26026374
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| || ||||||||||||||||||||| || || |||||||||||||||||  ||| ||| |||| | | |||||||||||||||    
T  26026478 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaacat-atagtttatggacgattttgttcgattt 26026380  T
Q  126 gaaaga 131  Q
     |||||    
T  26026379 aaaaga 26026374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 37787153 - 37787227
Alignment:
Q  31 aaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 37787227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 48247961 - 48248113
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc--aaaaacatgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| | |||||||||||||  |||||||| ||| |||| | |    
T  48247961 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacat-atagtttaagga 48248059  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||||||||||||||| ||| |   || || |||||| |||| |||||||||||    
T  48248060 cgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaaatg 48248113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 16081459 - 16081394
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| || ||||||||||||||||||||    
T  16081459 ctaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaa 16081394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 27245380 - 27245299
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || |||||||| |||||||| || ||||||||||||| |||| ||||| ||||||||||||||||||||    
T  27245380 agcataggtggttggactaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaa 27245299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 19590701 - 19590610
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataatt 19590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 29100220 - 29100311
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataatt 29100311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 32004774 - 32004699
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||| | |||| ||||| ||| |||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataatt 32004699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 35289063 - 35288988
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||| ||||||||| || ||||||| |||| ||||| ||| |||||||||    
T  35289063 taaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataatt 35288988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 38858819 - 38858728
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataatt 38858728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 38859025 - 38859100
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataat 102  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 38859100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 9181779 - 9181901
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactg----caaaaacatgataatttagg 107  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| ||||||||||||||     |||||||| ||| ||||||    
T  9181779 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacat-atagtttagg 9181877  T
Q  108 tatgattttgttcgatttgaaaga 131  Q
     | ||||||||||||||| |||||    
T  9181878 gacgattttgttcgatttaaaaga 9181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 25637374 - 25637254
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc--aaaaacatgataatttaggta 109  Q
    |||||||| ||| ||  |||||||||||||| | || ||||||||||||| ||||| |||| ||||||||||||| |  |||||||| ||| |||||| |    
T  25637374 agcataggtggttggcttaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacat-atagtttaggga 25637276  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  25637275 cgattttgttcgatttaaaaga 25637254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 2659211 - 2659300
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataatt 2659300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 5334243 - 5334352
Alignment:
Q  66 ataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtg 165  Q
    ||||| ||| ||||||||||||||||||    ||| |||||| | ||||||||||||||| ||||| | || || |||||  |||| |||||||||||||    
T  5334243 ataggtggttggactaaaactgcaaaaaatatatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtg 5334342  T
Q  166 atgaccaaaa 175  Q
    | ||||||||    
T  5334343 aggaccaaaa 5334352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 24929689 - 24929754
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || |||| |||||||| ||||| |||| ||||||||||||||||||||    
T  24929689 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaa 24929754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 32004985 - 32005074
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||| |||| |||||   ||||| ||  ||||||| |||| ||||| ||| |||||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataatt 32005074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 34534162 - 34534251
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 34534251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 48247767 - 48247686
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| || |||||||||||||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaa 48247686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 28687750 - 28687606
Alignment:
Q  32 aaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaag 130  Q
    |||||||||||| | || ||||||||||||| ||||||| || |||||||| ||||||||||| |  ||| |||| | | |||||||||||||||  ||     
T  28687750 aaactgtcatttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaaatatagtttaaggacgattttgttcgatttataaa 28687651  T
Q  131 aagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |   ||||| |||||  |||| |||||||||||  ||||||||||    
T  28687650 agatagaaccattttcgtgagttggtcaaaatgatatgaccaaaa 28687606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 39388652 - 39388789
Alignment:
Q  29 ctaaaactgtcatttctc-tgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggtatgattttgttcgatt 124  Q
    ||||||||||||||| |  || |||| |||||||||||||||| || ||||||||||||||||||||  ||| ||| |||||  | ||||||||||||||    
T  39388652 ctaaaactgtcattttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaacat-atagtttagagacgattttgttcgatt 39388750  T
Q  125 tgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    | ||||| | || |||| |||  |||| |||||||||||    
T  39388751 taaaagaggtaggacaaatttcgtgagttggtcaaaatg 39388789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 5745815 - 5745702
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||| | ||||| |||| || |||||||||||| |||||||| ||| |||| | |     
T  5745815 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgcaaaaaacat-atagtttaagaaa 5745717  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  5745716 gattttgttcgattt 5745702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 14311492 - 14311340
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactg--caaaaacatgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||| | ||||||| |||||||| ||||| |||| ||||| ||||||||   |||||||| ||| |||||| |    
T  14311492 agcataggtggttggactaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactgtaaaaaaacat-atagtttaggga 14311394  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     |||||| ||| |||| ||||| | | ||| | ||||||||| |||| ||||||    
T  14311393 cgattttattcaatttaaaagaggtataaccaattttatgagttggttaaaatg 14311340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 26026688 - 26026801
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||  ||||||||||| |||||||| ||| |||| | ||    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgcaaaaaacat-atagtttaaggat 26026786  T
Q  111 gattttgttcgattt 125  Q
    | |||||||||||||    
T  26026787 ggttttgttcgattt 26026801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 27245574 - 27245687
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaa-acatgataatttaggtat 110  Q
    |||||||| ||| || |||||||| | |||||| || ||||||||||||| ||||| |||| || |||||||| ||||||| |||| |||||||| | |     
T  27245574 agcataggtggttggactaaaactatgatttctgtgcgtttctggagttggaaatagggagatatgactaaaattgcaaaatacat-ataatttaaggac 27245672  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  27245673 gattttgttcgattt 27245687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 786943 - 786878
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||| |||| || |||| |||||||| ||||| |||| ||||||||||||||||||||    
T  786943 ctaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaa 786878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 2758067 - 2758231
Alignment:
Q  12 tagcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggactaaaactgc-aaaaacatgataatttaggta 109  Q
    ||||||| | ||| || ||||||||||||||| | || ||||||||||||  ||||||| || || ||||||| |||| |||||||| ||| |||| | |    
T  2758067 tagcataagtggttggactaaaactgtcatttatatgcgtttctggagttagaaatagggggatatgactaaacctgcaaaaaacat-atagtttatgga 2758165  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||||||||||||||| ||||| | ||||| |||||  |||| ||  ||||||| || ||||||||    
T  2758166 cgattttgttcgatttaaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaa 2758231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 11971514 - 11971433
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||| | ||||||||| || ||| ||||| |||| |||||||||||||| |||||    
T  11971514 agcataggtggttggactaaaactgtcatttatgtgtgtttctagaattggaaatagggagataggactaaaactgtaaaaa 11971433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 26048124 - 26048067
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg 70  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| |||||||    
T  26048124 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagg 26048067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 45815466 - 45815398
Alignment:
Q  65 aataggaggtaggactaaaactgcaaaaa--catgataatttaggtatgattttgttcgatttgaaaga 131  Q
    |||| |||||| |||||||||||||||||  ||||||| |||||| | | |||||||||||||||||||    
T  45815466 aataagaggtaagactaaaactgcaaaaaaacatgatagtttagggacggttttgttcgatttgaaaga 45815398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 2659000 - 2658924
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| |||||||||| |||| ||||||| |||||||||||||| ||| |||| ||||| ||| |||||||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataatt 2658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 4641828 - 4641904
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||| ||| |||||||||||| ||||||| |||  ||||| ||| |||||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataatt 4641904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 29100011 - 29099935
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||| |||  |||||||| ||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 29099935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 34533952 - 34533876
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||| ||||||||||||| |||| ||||| ||||||||||||||||||||  ||| ||||| ||| |||||||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataatt 34533876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 4641616 - 4641525
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||| |||||||||||| |||||||||||  ||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 4641525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 14311659 - 14311738
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    |||||| ||| || |||||| |||||||||| || |||||| |||||| ||||||| || || |||||||||||||||||    
T  14311659 cataggtggttggactaaaattgtcatttctgtgcgtttctagagttggaaatagggagataagactaaaactgcaaaaa 14311738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 23952892 - 23952830
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||| ||||||||||| |||||||| | |||||||||| ||||||||| |||| |||||    
T  23952892 ctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaa 23952830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 26048319 - 26048401
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacat 96  Q
    |||||| ||| || ||||||||||||||| | ||  ||| |||||||| ||||| |||| || ||||||||||||||||||||    
T  26048319 cataggtggttggactaaaactgtcatttatgtgcatttttggagttggaaatagggagatatgactaaaactgcaaaaacat 26048401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 35161171 - 35161291
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || | |||||| |||||| | || |||| |||||||| ||||||| || || |||||||||||||||||  ||| ||| |||||| |    
T  35161171 agcataggtggtcggcccaaaactatcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacat-atagtttaggga 35161269  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  35161270 cgattttgttcgatttaaaaga 35161291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 15712525 - 15712460
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||| | || |||||| |||||| ||||| |||| ||||||||||||| ||||||    
T  15712525 ctaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaa 15712460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 2e-39; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 39485240 - 39485078
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatg 111  Q
    |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| ||| |||||| | |    
T  39485240 agcatatggggtaggtctaaaactgtcatctctctgtgtttctgaagttgaaaataggagataggactaaaactgcaaaaaacat-atagtttagggacg 39485142  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||||||||||||||||| | || || |||||  |||||| ||||||||| || ||||||||    
T  39485141 attttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaa 39485078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 17088326 - 17088161
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc------aaaaacatgataatttag 106  Q
    |||||||| |||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||| |||      |||||||||||| |||||    
T  17088326 agcataggaggtaggtctaaaactgccatttctctgcatttctgaagttgaaaataggaggtaggactaaaattgcaaaaaaaaaaacatgatagtttag 17088227  T
Q  107 gtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaa 173  Q
    | | | ||||||||||||||||||| ||| ||| |||||  |||||||||||||||| |||||||||    
T  17088226 g-acggttttgttcgatttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaa 17088161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 29021234 - 29021398
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa--catgataatttaggtat 110  Q
    |||||||| ||| || | ||||||||||||| | || ||||||||||||||||||||| |||| |||||||||||||||||  | |||||||||||| |     
T  29021234 agcataggtggttggacaaaaactgtcatttatgtgcgtttctggagttgaaaatagggggtaagactaaaactgcaaaaaaccgtgataatttagggac 29021333  T
Q  111 gattttgttcgatttgaaagaagca-gaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||||||||| ||| |||| |||||  ||||||||||||||||||| ||||||||    
T  29021334 gattttgttcgatttgaaagaggcatgaac-attttcgtgagctggtcaaaatgtgaggaccaaaa 29021398  T

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Target: chr1; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 23526815 - 23526671
Alignment:
Q  32 aaactgtcatttctctgtgtttctggagttgaaaataggaggtagg-actaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaag 130  Q
    |||||||||||||| || |||| |||||||||||||||| || ||| |||||||||||||||| |||||| | |||| ||||||||||||||||| ||||    
T  23526815 aaactgtcatttctgtgcgtttttggagttgaaaatagggggcagggactaaaactgcaaaaaaatgatagtctagggatgattttgttcgatttaaaag 23526716  T
Q  131 aagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    | |||| || |||||  ||||||||||||||||||| ||||||||    
T  23526715 aggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaa 23526671  T

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Target: chr1; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 44802555 - 44802692
Alignment:
Q  27 gtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| | ||||||||||  |||    
T  44802555 gtctaaaattgtcatttttctgtgtttctggagttgaaaataggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgttt 44802654  T
Q  126 gaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    |||||| |||  || | |||  ||||||||||||||||    
T  44802655 gaaagaggcatgaccactttcgtgagctggtcaaaatg 44802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 9833522 - 9833670
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||||| |||||| |||||| ||| |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||| | |    
T  9833522 agcataggtggtaggactaaaaatgttatttctgtgcgtttctggagttgaaaatagggggtaggactaaaactgcaaaaaacataatattttagggacg 9833621  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaa 160  Q
    |||||||||||||||||||| |||  || |||||  |||| ||||||||    
T  9833622 attttgttcgatttgaaagaggcatgactattttcgtgagttggtcaaa 9833670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 17088516 - 17088672
Alignment:
Q  19 gggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgt 118  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| ||||||||||||||||    ||| |||||| | | ||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgtttctagatttgaaaataggaggtagaactaaaactgcaaaaaatatatagtttagggacggttttgt 17088615  T
Q  119 tcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    | ||||||||||| |||  || |||||  ||||||| |||||||| || ||||||||    
T  17088616 ttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaa 17088672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 50926611 - 50926774
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggta-ggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||  ||||| | ||||||| |||||||||||||||| |||| |||||||||||||||||| |||||| |||||| | |    
T  50926611 agcataggtggttggactaaaactaccatttatgtgtgtttatggagttgaaaatagggggtaaggactaaaactgcaaaaaaatgatagtttagggacg 50926710  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     |||||||||||||||||||  | | || |||||  |||||||||||||||| |||||||||||    
T  50926711 gttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaa 50926774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 48173909 - 48173773
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa--catgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||| |  | |||| |||||||||||||||| |||| |||||||| ||||||||  ||||||||||||||   ||||||||||||||||    
T  48173909 ctaaaactgtcatttatgagagtttttggagttgaaaatagggggtatgactaaaagtgcaaaaaaacatgataatttagggtcgattttgttcgatttg 48173810  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||| ||||||| |||||| ||| ||||||||||||    
T  48173809 aaagaggcagaaccatttttgtgaactggtcaaaatg 48173773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 50926408 - 50926243
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggt-aggactaaaactgc--aaaaacatgataatttaggta 109  Q
    |||||||| ||| || ||||||||  ||||| | |||||||||||||||||||||||||||| ||||||||||||||  ||||| |||||| |||||| |    
T  50926408 agcataggtggttggactaaaactaccatttatgtgtgtttctggagttgaaaataggaggtaaggactaaaactgcaaaaaaaaatgatagtttaggga 50926309  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||||||||||||||||||||| | |  |  |||||  |||||||||||||||| || ||||||||    
T  50926308 cgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaa 50926243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 45048533 - 45048668
Alignment:
Q  40 atttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaa 138  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | | |||||||||||| |||||| | |  |    
T  45048533 atttctctgcgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acggttttgttcgattggaaagaggtatga 45048631  T
Q  139 caatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    | |||||  ||| |||||||||||| || ||||||||    
T  45048632 ccattttcgtgaactggtcaaaatgcgaggaccaaaa 45048668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 45048330 - 45048180
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgca-aaaacatgataatttaggtatg 111  Q
    ||||||| ||||| |||||||||||| |||||| || ||||||||||||||||||| |||||||||||||||||||| ||||||| ||| |||| | | |    
T  45048330 agcatagagggtaagtctaaaactgttatttctatgcgtttctggagttgaaaatatgaggtaggactaaaactgcaaaaaacat-atagtttatggacg 45048232  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||| |||| ||||| | ||||| |||||  | || |||||||||||    
T  45048231 attttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatg 45048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 44291442 - 44291314
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgcaaaaa---catgataatttaggtatgattttgttcgatttgaaagaagcagaacaattttt 146  Q
    ||||||||| ||||||| |||||||| |||||||||||||||||   ||||||| |||| | | |||||||||| |||||||||| ||| ||| |||||     
T  44291442 gtttctggatttgaaaacaggaggtatgactaaaactgcaaaaaaaacatgatagtttatggacgattttgttcaatttgaaagaggcataaccattttc 44291343  T
Q  147 atgagctggtcaaaatgtgatgaccaaaa 175  Q
     ||||||||||||||||||| ||||||||    
T  44291342 gtgagctggtcaaaatgtgaggaccaaaa 44291314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 44291701 - 44291831
Alignment:
Q  33 aactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggt-atgattttgttcgatttgaaag 130  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | |||||| | |||||| |||||||| ||||    
T  44291701 aactgccatttctatgtgtttctggagttgaaaatagggggtaggactaaaactgcaaaaaacatgat-agttaggtgacgattttattcgatttaaaag 44291799  T
Q  131 aagcagaacaatttttatgagctggtcaaaat 162  Q
    |  ||  || ||||| ||||||||||||||||    
T  44291800 agacatgaccattttcatgagctggtcaaaat 44291831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 29021056 - 29020906
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaa-catgataatttaggtatg 111  Q
    ||||||| ||||||| ||||||||| ||||| | || |||| ||||| ||||||||||  |||  ||||||| |||||||| |||||||||||| | |||    
T  29021056 agcatagcgggtaggactaaaactgacatttatgtgcgtttttggaggtgaaaatagggagtaacactaaaattgcaaaaaacatgataatttaaggatg 29020957  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaat 162  Q
    |||||||||||||| |||||  ||  || |||||||||||||| |||||||    
T  29020956 attttgttcgatttaaaagagacatgaccatttttatgagctgatcaaaat 29020906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 29307317 - 29307402
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 29307402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 9992331 - 9992250
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  9992331 agcataggtggtcggactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaa 9992250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 52335896 - 52336031
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttga 127  Q
    ||||||||||||||| | || ||||||||||||| ||||||| || || ||||||||||||||||| |  ||| |||||| | ||||||||||||||| |    
T  52335896 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaatatagtttagggacgattttgttcgatttaa 52335995  T
Q  128 aagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    |||| | || || | ||| ||||| |||||||||||    
T  52335996 aagaggtaggaccaatttcatgagttggtcaaaatg 52336031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 8230013 - 8230130
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggactaaaactgc-aaaaacatgataatttaggtatga 112  Q
    |||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || || |||||||||||| |||||||| ||| |||||| | ||    
T  8230013 cataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacat-atagtttagggacga 8230111  T
Q  113 ttttgttcgatttgaaaga 131  Q
    ||||||||||||| |||||    
T  8230112 ttttgttcgatttaaaaga 8230130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 1837681 - 1837562
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| || |||||||||||| |||||||| ||| |||||| |     
T  1837681 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacat-atagtttagggac 1837583  T
Q  111 gattttgttcgatttgaaaga 131  Q
     |||||||||||||| |||||    
T  1837582 aattttgttcgatttaaaaga 1837562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 37505438 - 37505522
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacat 96  Q
    |||||||| ||| || ||||||||||||||| | || |||| |||||||||||||| |||| |||||||||||||||||||||||    
T  37505438 agcataggtggttggactaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaacat 37505522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 44954612 - 44954759
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||| | ||||||||||| |||||     
T  44954612 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttatggatgattttgtttgattta 44954710  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||| | | |  |  ||||| ||||| ||||||||||| || ||||||||    
T  44954711 aaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaa 44954759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 5962947 - 5963038
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 5963038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 15173272 - 15173181
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 15173181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 50970647 - 50970738
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 50970738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 17433597 - 17433675
Alignment:
Q  27 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 17433675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 21938739 - 21938626
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||||||||||||||| |||||||| ||| |||| | |     
T  21938739 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttatggac 21938641  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  21938640 gattttgttcgattt 21938626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 6224859 - 6224722
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgcaaaaac-atg-ataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||| | || ||||||||||||| |||||| ||| || ||||||||||| |||||  ||  |||||||| | | |||||||||||||||    
T  6224859 ctaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactgtaaaaaatatatataatttaaggacgattttgttcgattt 6224760  T
Q  126 gaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||| ||  ||||| ||||||||||| |||||||||||    
T  6224759 aaaaaaacaagaaccatttttatgagttggtcaaaatg 6224722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 9019338 - 9019423
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||| |||||||||||||| ||||||||| |||||||| | |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 9019423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 17641750 - 17641815
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  17641750 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 17641815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 23526942 - 23527063
Alignment:
Q  55 tggagttgaaaataggaggta-ggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagct 153  Q
    |||||||||||||||| || | |||||||||||||||||| |||||| |||||  | | ||||||||||||| ||| | |||  || ||||| |||||||    
T  23526942 tggagttgaaaatagggggcacggactaaaactgcaaaaaaatgatagtttagagacggttttgttcgatttaaaaaaggcatgaccattttcatgagct 23527041  T
Q  154 ggtcaaaatgtgatgaccaaaa 175  Q
    | ||||||||||| || |||||    
T  23527042 gatcaaaatgtgaggatcaaaa 23527063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 30786932 - 30786796
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgca-aaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||| ||||||||| || |||| |||||||| ||||||| || |||||||||||||||| ||||||| ||| |||||| | |||||||||||||||     
T  30786932 ctaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 30786834  T
Q  127 aaagaagca-gaacaatttttatgagctggtcaaaatg 163  Q
    ||||| | | || |||||||  |||| |||||||||||    
T  30786833 aaagaggtaggaccaattttcgtgagttggtcaaaatg 30786796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 34555750 - 34555831
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| || |||||||||||||||||    
T  34555750 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaa 34555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 18984503 - 18984579
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  18984503 ctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 18984579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 8678911 - 8679001
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||   ||||| ||||||||||| |||| ||||| ||| |||||||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaat-ggaggtaggacgaaaaatgcaacaaaaatgataatt 8679001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 5962739 - 5962677
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| || |||| |||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaa 5962677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 10278725 - 10278605
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgc--aaaaacatgataatttaggta 109  Q
    |||||||| ||| || |||||| |||||||| | || ||||||||||||| ||||  |||| |||||||||||||||  |||||||| ||| |||||| |    
T  10278725 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacat-atagtttaggga 10278627  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  10278626 cgattttgttcgatttaaaaga 10278605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 10278936 - 10279030
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| |||||||||||||||| | ||| |||| ||||||||||||||  ||||||| ||| |||| | | |||||||||||||||    
T  10278936 ctaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg--aaaacat-atagtttaaggacgattttgttcgattt 10279030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 21856412 - 21856458
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 21856458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 29869796 - 29869750
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 29869750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 50970437 - 50970363
Alignment:
Q  31 aaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||||| |||| ||||| ||| |||||||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataatt 50970363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 8229800 - 8229735
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||| ||||||||||||||||||||    
T  8229800 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaa 8229735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 9992542 - 9992638
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||  | ||||||||||||||||||| |||| ||||||||| ||||| |||||||| ||| |||| | | |||||||||||||||    
T  9992542 taaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaacat-atagtttaagcacgattttgttcgattt 9992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 16299068 - 16299133
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||| |||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  16299068 ctaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaa 16299133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 33144078 - 33144013
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||  ||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaa 33144013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 33144288 - 33144365
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| |||||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 33144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 443921 - 444040
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| |  | |||| |||| ||| ||||||| || ||||||||||||||| |||||||| ||| |||||| |     
T  443921 agcataggtggttggactaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaacat-atagtttaggaac 444019  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  444020 gattttgttcgatttaaaaga 444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 2868094 - 2868241
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    |||||||||||| || | || ||||||||||||| ||||||| || || |||||||||||| |||||||| ||| | |||| | |||||||||||||||     
T  2868094 ctaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacat-atagtgtagggacgattttgttcgattta 2868192  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||| | || || |||||  || | |||||||||||||| || |||||    
T  2868193 aaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaa 2868241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 5540194 - 5540278
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 5540278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 15173478 - 15173554
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||| | ||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 15173554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 15646571 - 15646655
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataatt 15646655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 16298858 - 16298739
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgca-aaaacatgataatttaggtat 110  Q
    |||||||| ||| || |||||||| |||||| | || |||||  |||||| ||||||| || |||||||||||||||| ||||||| ||| |||||| |     
T  16298858 agcataggtggttggactaaaactatcatttatttgcgtttccagagttggaaataggtagataggactaaaactgcaaaaaacat-atagtttagggac 16298760  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  16298759 gattttgttcgatttaaaaga 16298739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 17112442 - 17112366
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||| |||||| |||| |||||||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataatt 17112366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 21856203 - 21856127
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||  |||| ||||| ||| |||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataatt 21856127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 29307122 - 29307038
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 29307038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 29870003 - 29870079
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||| ||||||  || |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 29870079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 34555541 - 34555436
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactg---caaaaacatgataatttaggtatgattttgttcgatt 124  Q
    |||||||| |||||||| || ||||||||||||| ||||| |||| ||||||||||||||    |||||||| ||| |||||| | ||||||||||||||    
T  34555541 ctaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaaacat-atagtttagggacgattttgttcgatt 34555443  T
Q  125 tgaaaga 131  Q
    | |||||    
T  34555442 taaaaga 34555436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 39154404 - 39154480
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||| ||||||||||||| ||||||| |||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 39154480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 50305169 - 50305233
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||| | ||||||| |||||||||||||| |||| || |||||||||||||||||    
T  50305169 taaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaa 50305233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 4636356 - 4636431
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||| |||| |||| ||||| ||| |||||||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataatt 4636431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 18984295 - 18984204
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||| ||||||||||||| ||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 18984204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 1744500 - 1744422
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| || |||||||||||||||||    
T  1744500 ataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaa 1744422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 4636146 - 4636108
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgttt 53  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgttt 4636108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 17433392 - 17433346
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggag 17433346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 29439107 - 29438987
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || |||||||||| |||| | ||||||| | || |||||||||| ||| ||||||||||||||||||||  |||  || |||||| |    
T  29439107 agcataggtggttggactaaaactgttatttttgtgtgttttttgaattgaaaatagagagataggactaaaactgcaaaaaaacatt-tagtttaggga 29439009  T
Q  110 tgattttgttcgatttgaaaga 131  Q
     ||||||||||||||| |||||    
T  29439008 cgattttgttcgatttaaaaga 29438987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 15646353 - 15646260
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatttaggtatgattttgttc 120  Q
    ||||||||||||||||||||  ||| ||||| ||||||||| |||||||||| |||| ||||| ||| ||||||||| | |||  |||||||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttc 15646260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 23340343 - 23340278
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgcaaaaa 93  Q
    |||||||||||||||||  | ||||||||||||| |||| ||||| || |||||||||||||||||    
T  23340343 ctaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaa 23340278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 44954386 - 44954321
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || ||||||||||||| ||| || ||| || |||||||||||||||||    
T  44954386 ctaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgcaaaaa 44954321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 8678702 - 8678626
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||| || ||||||| || |||||||||| ||||||||| |||| ||||| ||| |||||||||    
T  8678702 ctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataatt 8678626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 37421322 - 37421217
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc---aaaaacatgataatttaggtatgattttgttcgatt 124  Q
    ||||||||||||||||| || |||| |||||||| ||||| |||  || ||||||||||||   |||||||| ||| |||||| | ||||||||||||||    
T  37421322 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgcaaaaaaaacat-atagtttagggacgattttgttcgatt 37421224  T
Q  125 tgaaaga 131  Q
    | |||||    
T  37421223 taaaaga 37421217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 44582233 - 44582114
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgca-aaaacatgataatttaggtat 110  Q
    |||||||| ||| || |||||| |||||||| | || |||| |||||||| ||| |  ||| |||||||||||||||| ||||||| |||||||||  |     
T  44582233 agcataggtggttggactaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaacat-ataatttagagac 44582135  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  44582134 gattttgttcgatttaaaaga 44582114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 48174122 - 48174161
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgca 89  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  48174122 gtttctggagttgaaaatagggggtgggactaaaactgca 48174161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 4080181 - 4080084
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactg-caaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||| | || |||||| |||||| ||||| |||| || |||||||||||  |||||||| ||| |||||| | |||||||||||||||    
T  4080181 ctaaaactgtcatttttgtgcgtttctagagttggaaatagggagatatgactaaaactgtaaaaaacat-atagtttagggacgattttgttcgattt 4080084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 25274831 - 25274769
Alignment:
Q  113 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||||||| |||  || |||||  |||||||||||||||| || ||||||||    
T  25274831 ttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaa 25274769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 37505228 - 37505092
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| |   ||| |||||||||||||||| |  ||||||||||||||||||||  ||| ||| |||| | | |||||||||||||||    
T  37505228 ctaaaactgtcatttctgttcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaacat-atagtttaaggacgattttgttcgattt 37505130  T
Q  126 gaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||| |   ||||| |||||  |||| |||||||||||    
T  37505129 aaaaaagatagaaccattttcgtgagttggtcaaaatg 37505092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 17641525 - 17641460
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||| | || ||||||||||||| ||||| |||| ||| ||||||||| ||||||    
T  17641525 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaactaaaactacaaaaa 17641460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 30787158 - 30787199
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg 70  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  30787158 ctaaaactgtcatttctctgcatttatggagttgaaaatagg 30787199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 15288 - 15126
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatga 112  Q
    |||||| ||| ||||||||||| ||| |||||| || |||| || |||||||||||||||||| ||| |||||||||||||||||||| ||||||  ||     
T  15288 agcataagggataggtctaaaattgttatttctgtgcgtttatgaagttgaaaataggaggtaagacaaaaactgcaaaaacatgatagtttagggttgt 15189  T
Q  113 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||||||||||||| ||||||  |||||   ||||||||||||||| |||||||||||    
T  15188 ttttgttcgatttgaaagaggcagaatcattttcgcgagctggtcaaaatgcgatgaccaaaa 15126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 15506 - 15632
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatg 149  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||| |   |||||||||||||||||||  ||| || |||||  ||    
T  15506 gtttctggagttgaaaataggaggtatgactaaaactacaaaaacatgatagtttagggacagttttgttcgatttgaaagagtcaggaccattttcgtg 15605  T
Q  150 agctggtcaaaatgtgatgaccaaaaa 176  Q
    ||||| |||||||| ||  ||||||||    
T  15606 agctgatcaaaatgcgagaaccaaaaa 15632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 4e-31; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 28877077 - 28876916
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggact-aaaactgcaaaaacatgataatttaggtatgat 113  Q
    ||||||||||||||||||| || || |||||||| |||||| |||||||||||| || ||| || | |||||| ||||||||||||| |||||| | |||    
T  28877077 catagggggtaggtctaaagctatcgtttctctgcgtttcttgagttgaaaataagaagtaagatttaaaactacaaaaacatgatagtttagggacgat 28876978  T
Q  114 tttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||||||||||||||| ||||||  |||||  ||||||| |||||||| || ||||||||    
T  28876977 tttgttcgatttgaaagaggcagaattattttcgtgagctgatcaaaatgcgaggaccaaaa 28876916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 18805337 - 18805266
Alignment:
Q  14 gcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaac 85  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctctgtgtttctggagttgaagataggaggtaggactaaaac 18805266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 28877260 - 28877422
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatg 111  Q
    |||||||| ||||||||||||| |||||||| | |  |||||||||||| ||||||| ||||||||||||||| || ||||||||||| | ||||| |      
T  28877260 agcataggaggtaggtctaaaattgtcatttatatacgtttctggagttaaaaatagaaggtaggactaaaacagcaaaaaacatgat-agttagggaca 28877358  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||||||| |||||||||| | | ||| |||||  |||| ||||||||||| || ||||||||    
T  28877359 attttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaa 28877422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 35427182 - 35427345
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| | ||||||||||||||||||    |||||||||| | |    
T  35427182 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaatatataatttagggacg 35427281  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||||||| ||| ||||| | ||||| |||||  |||| ||||||||||| || ||||||||    
T  35427282 attttgttcggtttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaa 35427345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 7910986 - 7911137
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||||||||||| || |||| ||||||||||||||| | | || |||||||||||||||||    ||| |||||| | |    
T  7910986 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaatatatagtttagggacg 7911085  T
Q  112 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    |||||||||||||| ||||| | ||||| |||||  |||| |||||||||||    
T  7911086 attttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatg 7911137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 28254796 - 28254915
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaacatgataatttaggtatg 111  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    ||| |||||| | |    
T  28254796 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaattatatagtttagggacg 28254895  T
Q  112 attttgttcgatttgaaaga 131  Q
    |||||||||||||| |||||    
T  28254896 attttgttcgatttaaaaga 28254915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 599692 - 599589
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||| | || ||||||||||||| ||||||| || || ||||||||||||||||| ||| |||||||||| |||||||||||||||||     
T  599692 ctaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaacat-ataatttagggatgattttgttcgattta 599594  T
Q  127 aaaga 131  Q
    |||||    
T  599593 aaaga 599589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 9796902 - 9796751
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| || |||||||||||| |||||||| ||| |||| | ||    
T  9796902 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaacat-atagtttatggat 9796804  T
Q  111 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
    ||||||||||||||| ||||| | || || | |||| |||| |||||||||||    
T  9796803 gattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatg 9796751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 41260647 - 41260750
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||| | || ||||||||||||||||||| |||| ||||||||||||||| |||||||| ||| |||||| | |||||||||||||||     
T  41260647 ctaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 41260745  T
Q  127 aaaga 131  Q
    |||||    
T  41260746 aaaga 41260750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 44831614 - 44831705
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataatt 44831705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 5731182 - 5731295
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| ||| ||||||||||| |||||||| ||| |||| | |     
T  5731182 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgcaaaaaacat-atagtttatggac 5731280  T
Q  111 gattttgttcgattt 125  Q
    |||||||||||||||    
T  5731281 gattttgttcgattt 5731295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 16578466 - 16578583
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa-catgataatttaggtat 110  Q
    |||||||| ||| || ||||||||||||||||| || |||||| | |||| ||||||| || |||||||||||||||||||| ||| ||| ||||   ||    
T  16578466 agcataggtggttggactaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaatgat 16578564  T
Q  111 gattttgttcgatttgaaa 129  Q
    |||||||||||||||||||    
T  16578565 gattttgttcgatttgaaa 16578583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 18049767 - 18049615
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| ||  |||||||||||||||| || ||||||||||||| ||||||| || ||||||||||||||||||||  ||| ||| |||| | |    
T  18049767 agcataggtggttggattaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 18049669  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 163  Q
     ||||||||||||||| ||| |   ||||| |||||  |||| |||||||||||    
T  18049668 cgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatg 18049615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 26252982 - 26252866
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgca-aaaacatgataatttaggtatgat 113  Q
    ||||| ||| || ||||| |||||||||||  | ||||||||||||| ||||| |||| |||||||||||||||| ||||||| ||| |||||| | |||    
T  26252982 ataggtggttggactaaatctgtcatttctgagcgtttctggagttggaaatagggagataggactaaaactgcacaaaacat-atagtttagggacgat 26252884  T
Q  114 tttgttcgatttgaaaga 131  Q
    |||||||||||| |||||    
T  26252883 tttgttcgatttaaaaga 26252866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 28254602 - 28254521
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || |||||| |||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  28254602 agcataggtggttggactaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 28254521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 13225023 - 13225099
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 13225099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 18049961 - 18050080
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgc-aaaaacatgataatttaggtat 110  Q
    |||||||| ||| ||  ||||||||| |||||| || ||||||||||||||||||| |||| ||||| |||||| || |||||||| ||| |||||| |     
T  18049961 agcataggtggttggagtaaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaacat-atagtttagggac 18050059  T
Q  111 gattttgttcgatttgaaaga 131  Q
    ||||||||||||||| |||||    
T  18050060 gattttgttcgatttaaaaga 18050080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 42035932 - 42035785
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaa-acatgataatttaggtatgattttgttcgatttg 126  Q
    ||||||||||||||| | || |||| |||||||  ||||||| || ||||||||||| ||||||| | || ||| |||| | | |||||||||||||||     
T  42035932 ctaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatatat-atagtttatggacgattttgttcgattta 42035834  T
Q  127 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    ||||| | ||||| |||||  |||| |||||||||||||| ||||||||    
T  42035833 aaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaa 42035785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 13224816 - 13224745
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaa 84  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| ||||    
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaa 13224745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 6115496 - 6115600
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    ||||||||||||||||| || |||||| ||||||||||| ||||| ||| ||||||||| |  |||||||| ||| |||||| | |||||||||||||||    
T  6115496 ctaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaacat-atagtttagggacgattttgttcgattt 6115594  T
Q  126 gaaaga 131  Q
     |||||    
T  6115595 aaaaga 6115600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 12572040 - 12571994
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 12571994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 34799256 - 34799092
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || |||||| |||||||| | || |||| |||||||| ||||||| || ||||||||||||||||||||  ||| ||| |||| | |    
T  34799256 agcataggtggttggactaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 34799158  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
     || |||||||||||| ||| ||  || || ||||| ||||| |||||||||||  ||||||||||    
T  34799157 cgactttgttcgatttaaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaa 34799092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 5730977 - 5730912
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| |  |||||||||||| |||||| ||||||||||||||||| |||||||    
T  5730977 ctaaaactgtcatttctgtacgtttctggagttaaaaatagggaggtaggactaaaacagcaaaaa 5730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 33743082 - 33743021
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagt-tgaaaataggaggtaggactaaaactgca 89  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||| |||| ||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgca 33743021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 9929070 - 9928994
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| |||||||||| |||||||||| ||||||| |||||||||||| |||| ||||| ||| |||||||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataatt 9928994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 11656841 - 11656917
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||  ||||||||| |||||||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 11656917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 12572235 - 12572311
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||  ||||||||| |||||||||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 12572311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 19176451 - 19176375
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||| |||| |||| ||||| ||| |||||||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataatt 19176375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 16578247 - 16578165
Alignment:
Q  50 gtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa-catgataatttaggtatgattttgttcgatttgaaaga 131  Q
    ||||||||||||| ||||||| || |||||| ||||||||||||| ||| |||||||||| | ||||||||||||||| |||||    
T  16578247 gtttctggagttggaaatagggagataggaccaaaactgcaaaaaacat-ataatttagggacgattttgttcgatttaaaaga 16578165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 19176659 - 19176750
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||| |||||||||||||||||||||| |||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 19176750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 44831408 - 44831333
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataat 102  Q
    |||||||| ||||||||||| |||| ||||||| |||||||||||||||||| |||| ||||| ||| ||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 44831333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 599867 - 599949
Alignment:
Q  12 tagcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgcaaaaa 93  Q
    ||||||| | ||| || ||||||||||||||||| || ||||||||| ||| |||||| ||| || |||||||||||||||||    
T  599867 tagcataagtggttggactaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaa 599949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 4630161 - 4630207
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggag 4630207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 33328334 - 33328288
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    ||||||||||||||||||||||||||||||||| || |||| |||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggag 33328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 9797112 - 9797177
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || |||| |||||||| ||||||| || ||| ||||||||||||||||    
T  9797112 ctaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaa 9797177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 9930026 - 9930103
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||||||| ||||||||||| | || |||||   ||||| || |||||||| |||| |||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaa 9930103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 18428147 - 18428212
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||| | || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  18428147 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaa 18428212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 33743290 - 33743379
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||| |||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 33743379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 35694030 - 35693965
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||| | || ||||||||||||| ||||| |||| |||||||||||||| |||||    
T  35694030 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaa 35693965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 33328524 - 33328600
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||| |||||||||| |||||||||| |||||||| |||||| |||| |||| ||||| ||| |||||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataatt 33328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 34799469 - 34799572
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 126  Q
    |||||||| |||||| | || |||| |||||||| |||||||| | ||||||||||||||| |||||||| ||| |||||| |  ||||||||||||||     
T  34799469 ctaaaactatcatttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaacat-atagtttagggacaattttgttcgattta 34799567  T
Q  127 aaaga 131  Q
    |||||    
T  34799568 aaaga 34799572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 41681518 - 41681594
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||  |||||||||| |||||||||| |||||||||| ||||||||| |||| ||||| ||| |||||||||    
T  41681518 ctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataatt 41681594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 7910714 - 7910628
Alignment:
Q  89 aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 176  Q
    |||||||| |||||||||| | ||||||||||||||| ||||| | | ||| |||||  |||| || ||||||||||| |||||||||    
T  7910714 aaaaacat-ataatttagggacgattttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaa 7910628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 35694242 - 35694321
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| || ||||||||| |||||||    
T  35694242 cataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataagactaaaacagcaaaaa 35694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 42036144 - 42036261
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggag-gtaggactaaaactgc--aaaaacatgataatttaggtatga 112  Q
    ||||| ||| || ||||||||||||||| | ||  |||||||||||| ||||| |||  || ||||||||||||  |||||||| ||| |||||| | ||    
T  42036144 ataggtggttggactaaaactgtcatttttgtgcatttctggagttggaaatatgagaatacgactaaaactgcaaaaaaacat-atagtttagggacga 42036242  T
Q  113 ttttgttcgatttgaaaga 131  Q
    ||||||||||||| |||||    
T  42036243 ttttgttcgatttaaaaga 42036261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 4629952 - 4629882
Alignment:
Q  35 ctgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||| || |||||||||||| |||||||||||||| ||| |||| ||||| ||| |||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataatt 4629882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 10047068 - 10047126
Alignment:
Q  74 taggactaaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaa 132  Q
    ||||| ||||||||||||||||||||| |||||  |  |||||||||||||| ||||||    
T  10047068 taggattaaaactgcaaaaacatgatagtttagagaccattttgttcgatttaaaagaa 10047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 15255987 - 15255910
Alignment:
Q  55 tggagttgaaaatagg-aggtaggactaaaactgca-aaaacatgataatttaggtatgattttgttcgatttgaaaga 131  Q
    |||||||| ||||||| || |||||||||||||||| ||||||| ||| |||||| | ||||||||||||||| |||||    
T  15255987 tggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaaaaga 15255910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 34540934 - 34541008
Alignment:
Q  31 aaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||| ||||||||||| ||||||  |||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 34541008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 15256214 - 15256279
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    |||||| |||||||||| || ||||||||||||| ||||| |||| || ||||| |||||||||||    
T  15256214 ctaaaattgtcatttctgtgcgtttctggagttggaaatagggagatatgactagaactgcaaaaa 15256279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 31133396 - 31133319
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||| | ||||||||||||||||||||||||||  |||| |||||   ||||| || |||||||| |||| |||||    
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaa 31133319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 31133605 - 31133666
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||| ||||||||||||  ||||||||| |||||||||||||||| ||| |||| |||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaa 31133666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 35163874 - 35163817
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg 70  Q
    |||||||| ||| || ||||||||||||||||| || |||||| |||||| |||||||    
T  35163874 agcataggtggttggactaaaactgtcatttctgtgcgtttctcgagttggaaatagg 35163817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 35426973 - 35426908
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaa 93  Q
    ||||||||||||||||| || |||| |||||||| ||||| |||| ||||| ||||| ||||||||    
T  35426973 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggagtaaaattgcaaaaa 35426908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 51; Significance: 9e-20; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 6777 - 6885
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-----aggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcg 121  Q
    ||||||||||||||||| || |||||||||||||||||||||     ||||||||||||||||||  ||||||||| || |||||||| |||||||||||    
T  6777 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatg-tagtttaggtacgattttgttcg 6875  T
Q  122 atttgaaaga 131  Q
    |||| |||||    
T  6876 atttaaaaga 6885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 6551 - 6455
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    |||||||||||||||| || ||||||| ||||| ||||||| || ||||||||||||||| |||||||| |||||||| | | |||||||||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgttcgattt 6455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 51; Significance: 9e-20; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 6795 - 6903
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-----aggtaggactaaaactgc--aaaaacatgataatttaggtatgattttgttcg 121  Q
    ||||||||||||||||| || |||||||||||||||||||||     ||||||||||||||||||  ||||||||| || |||||||| |||||||||||    
T  6795 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatg-tagtttaggtacgattttgttcg 6893  T
Q  122 atttgaaaga 131  Q
    |||| |||||    
T  6894 atttaaaaga 6903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 6569 - 6473
Alignment:
Q  30 taaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 125  Q
    |||||||||||||||| || ||||||| ||||| ||||||| || ||||||||||||||| |||||||| |||||||| | | |||||||||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgttcgattt 6473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 4576 - 4667
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 4667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 42339 - 42254
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||| ||| |||| ||||| ||| |||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataatt 42254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 42528 - 42574
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 42574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 46443 - 46279
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaa--catgataatttaggta 109  Q
    |||||||| ||| || ||||||||||||||| | ||  ||| |||| ||| ||||||| || || |||||||||||||||||  ||| ||| |||||| |    
T  46443 agcataggtggttggactaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaacat-atagtttaggga 46345  T
Q  110 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 175  Q
    |||||||||||||||| ||||| | ||||| |||||  | || ||||||||||| || ||||||||    
T  46344 tgattttgttcgatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaa 46279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 1841 - 1752
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 1752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 2051 - 2127
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 134042 - 134119
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa 90  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| |||||    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 134119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 16880 - 16956
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 16956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 16672 - 16626
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 59  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 16626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 4969 - 4878
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| ||| |||||||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 5179 - 5224
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggagg 73  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||    
T  5179 ctaaaactgtcatttttctgcgtttctggagtttgaaaataggagg 5224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 159288 - 159370
Alignment:
Q  50 gtttctggagttgaaaataggaggtaggactaaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaaaga 131  Q
    |||| ||||| |||||||||| |||| |||||||||||| ||||| |||||| |||| | | |||||||||||||||||||||    
T  159288 gtttttggaggtgaaaatagggggtatgactaaaactgcaaaaaatatgatagtttatgaacgattttgttcgatttgaaaga 159370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 78493 - 78412
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggactaaaactgcaaaaa 93  Q
    |||||||| ||| || |||||| |||||||||| ||  |||||||||||| |||||| ||| ||||||||||||||||||||    
T  78493 agcataggtggttggactaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgcaaaaa 78412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 928 - 838
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggactaaaactgcaaaaacatgataatt 103  Q
    |||||| |||||| |||||||||||| ||||||||| |||| |||||   ||||| || |||||||| |||| ||||| || |||||||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaatgataatt 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 1116 - 1201
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    ||||| |||||||||||| ||||| |||| |||||||| | |||||||||||||||||||| |||  ||||| ||| |||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataatt 1201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 11007 - 11083
Alignment:
Q  29 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggactaaaactgcaa-aaacatgataatt 103  Q
    |||||||||  ||||||||| |||||| ||||| |||||||||||||||||| |||| ||||| ||| |||||||||    
T  11007 ctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 11083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 10797 - 10762
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctg 48  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctg 10762  T

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Target: scaffold0432 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 10242 - 10277
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctg 48  Q
    |||||||||||||||| |||||||||||||||||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctg 10277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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