View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2329_high_25 (Length: 324)

Name: NF2329_high_25
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2329_high_25
NF2329_high_25
[»] chr2 (32 HSPs)
chr2 (213-306)||(20581242-20581335)
chr2 (1-114)||(34322662-34322775)
chr2 (1-93)||(40331388-40331480)
chr2 (1-94)||(16494620-16494717)
chr2 (1-104)||(22801738-22801841)
chr2 (1-94)||(28551649-28551747)
chr2 (1-114)||(1587762-1587880)
chr2 (1-114)||(40331042-40331157)
chr2 (1-114)||(44839686-44839803)
chr2 (1-87)||(22786385-22786475)
chr2 (22-86)||(22782386-22782450)
chr2 (1-94)||(31968512-31968602)
chr2 (10-104)||(39038381-39038476)
chr2 (10-104)||(6391930-6392023)
chr2 (10-104)||(10010491-10010586)
chr2 (22-104)||(24851426-24851508)
chr2 (18-104)||(45087747-45087833)
chr2 (10-104)||(25188666-25188759)
chr2 (22-104)||(28701979-28702060)
chr2 (10-104)||(31801628-31801721)
chr2 (35-104)||(22188874-22188943)
chr2 (10-96)||(26367147-26367235)
chr2 (10-105)||(22316856-22316953)
chr2 (22-104)||(24778595-24778677)
chr2 (22-114)||(31328727-31328820)
chr2 (22-114)||(31335448-31335541)
chr2 (1-104)||(20152732-20152830)
chr2 (10-104)||(22455699-22455795)
chr2 (53-104)||(13964768-13964819)
chr2 (21-92)||(21537940-21538011)
chr2 (22-104)||(23234217-23234298)
chr2 (43-96)||(28712481-28712534)
[»] chr1 (29 HSPs)
chr1 (1-114)||(44824465-44824578)
chr1 (1-105)||(14264140-14264244)
chr1 (1-114)||(46088246-46088363)
chr1 (22-114)||(48570985-48571077)
chr1 (1-114)||(10250247-10250363)
chr1 (1-94)||(21215382-21215479)
chr1 (1-114)||(30571456-30571574)
chr1 (35-114)||(25449333-25449412)
chr1 (1-94)||(21983873-21983970)
chr1 (22-104)||(2833920-2834002)
chr1 (1-80)||(21121770-21121853)
chr1 (22-104)||(23037256-23037338)
chr1 (21-103)||(32786670-32786752)
chr1 (1-114)||(21135865-21135983)
chr1 (26-94)||(21205596-21205664)
chr1 (1-104)||(29215064-29215170)
chr1 (10-84)||(10756717-10756789)
chr1 (22-104)||(2266350-2266432)
chr1 (22-104)||(30892329-30892411)
chr1 (10-79)||(26702845-26702917)
chr1 (22-104)||(1577113-1577196)
chr1 (22-96)||(22600918-22600993)
chr1 (35-104)||(22428083-22428153)
chr1 (55-104)||(38281627-38281676)
chr1 (37-78)||(42283933-42283974)
chr1 (22-96)||(22153098-22153174)
chr1 (36-92)||(37640287-37640343)
chr1 (22-104)||(1899611-1899694)
chr1 (22-104)||(28493052-28493135)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-114)||(2709-2823)
[»] chr8 (37 HSPs)
chr8 (1-114)||(36104593-36104707)
chr8 (1-80)||(14990263-14990341)
chr8 (1-114)||(6407009-6407125)
chr8 (22-114)||(22673025-22673116)
chr8 (1-114)||(14990874-14990990)
chr8 (22-110)||(18152514-18152601)
chr8 (10-104)||(9319831-9319926)
chr8 (1-92)||(13431403-13431498)
chr8 (22-114)||(22662320-22662411)
chr8 (22-114)||(40846213-40846305)
chr8 (1-98)||(1744460-1744554)
chr8 (22-104)||(17796676-17796758)
chr8 (22-114)||(43639003-43639095)
chr8 (1-114)||(15336872-15336989)
chr8 (1-114)||(15425937-15426054)
chr8 (1-114)||(15517241-15517358)
chr8 (24-104)||(23185558-23185638)
chr8 (1-94)||(45292115-45292212)
chr8 (22-104)||(30422240-30422322)
chr8 (35-104)||(16206490-16206559)
chr8 (35-104)||(17442670-17442739)
chr8 (10-80)||(18321949-18322021)
chr8 (35-104)||(45539307-45539376)
chr8 (22-105)||(21932134-21932217)
chr8 (22-104)||(20383160-20383242)
chr8 (54-104)||(31445361-31445411)
chr8 (10-80)||(18679100-18679172)
chr8 (10-80)||(18718289-18718361)
chr8 (1-94)||(33560998-33561096)
chr8 (35-92)||(43773391-43773448)
chr8 (10-96)||(15934454-15934542)
chr8 (21-104)||(25163330-25163414)
chr8 (22-96)||(18121941-18122016)
chr8 (1-32)||(18152459-18152490)
chr8 (53-104)||(35028318-35028369)
chr8 (22-94)||(18771962-18772035)
chr8 (21-104)||(20256320-20256404)
[»] chr4 (38 HSPs)
chr4 (1-114)||(3106160-3106273)
chr4 (1-114)||(6516736-6516857)
chr4 (1-104)||(29120630-29120735)
chr4 (22-114)||(16939230-16939321)
chr4 (22-105)||(13576913-13576996)
chr4 (10-104)||(23749788-23749884)
chr4 (10-104)||(55379574-55379670)
chr4 (1-86)||(22190126-22190215)
chr4 (1-75)||(8103580-8103654)
chr4 (22-104)||(17246872-17246954)
chr4 (22-94)||(17399445-17399517)
chr4 (22-96)||(16852742-16852817)
chr4 (1-87)||(3500392-3500483)
chr4 (22-104)||(22676325-22676407)
chr4 (1-104)||(37436274-37436377)
chr4 (10-96)||(8686194-8686281)
chr4 (22-104)||(15134981-15135064)
chr4 (1-47)||(14154737-14154783)
chr4 (22-104)||(19621755-19621837)
chr4 (22-104)||(54679123-54679205)
chr4 (10-104)||(14605656-14605753)
chr4 (35-87)||(27189424-27189476)
chr4 (22-104)||(12600017-12600100)
chr4 (35-92)||(3792607-3792664)
chr4 (55-104)||(24628695-24628744)
chr4 (22-81)||(16847672-16847732)
chr4 (1-94)||(17701497-17701594)
chr4 (22-78)||(55731118-55731174)
chr4 (35-94)||(9752320-9752379)
chr4 (1-32)||(16939339-16939370)
chr4 (3-69)||(56533805-56533869)
chr4 (22-104)||(10071766-10071848)
chr4 (35-96)||(14905102-14905164)
chr4 (22-103)||(19611136-19611218)
chr4 (26-114)||(39420475-39420564)
chr4 (55-104)||(56033790-56033839)
chr4 (10-96)||(6640960-6641045)
chr4 (54-94)||(38513187-38513227)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-114)||(18501-18614)
[»] chr6 (34 HSPs)
chr6 (1-114)||(21617507-21617621)
chr6 (1-114)||(22077148-22077266)
chr6 (22-114)||(16332983-16333075)
chr6 (10-107)||(19623248-19623345)
chr6 (22-94)||(33353050-33353122)
chr6 (35-114)||(12422495-12422574)
chr6 (12-94)||(19066803-19066889)
chr6 (10-96)||(20113420-20113510)
chr6 (22-114)||(19833793-19833884)
chr6 (22-104)||(20731509-20731591)
chr6 (22-104)||(21234420-21234502)
chr6 (1-107)||(22801404-22801515)
chr6 (22-104)||(32543527-32543609)
chr6 (1-110)||(12348799-12348906)
chr6 (10-107)||(15986623-15986719)
chr6 (1-110)||(16876166-16876279)
chr6 (22-104)||(19687997-19688078)
chr6 (35-104)||(17380827-17380896)
chr6 (35-104)||(13435149-13435219)
chr6 (10-94)||(25929758-25929844)
chr6 (11-94)||(18912688-18912776)
chr6 (36-94)||(26588875-26588933)
chr6 (35-96)||(18377699-18377760)
chr6 (35-95)||(18434783-18434844)
chr6 (35-75)||(15953972-15954012)
chr6 (57-104)||(10631401-10631448)
chr6 (1-32)||(12422608-12422639)
chr6 (1-32)||(16333085-16333116)
chr6 (11-96)||(17304056-17304143)
chr6 (22-104)||(21624356-21624439)
chr6 (22-105)||(24116081-24116164)
chr6 (1-32)||(33353001-33353032)
chr6 (35-96)||(12041133-12041194)
chr6 (21-104)||(13601431-13601515)
[»] chr3 (50 HSPs)
chr3 (2-114)||(30054965-30055078)
chr3 (1-114)||(2025348-2025463)
chr3 (1-114)||(40850233-40850351)
chr3 (1-114)||(46797180-46797296)
chr3 (1-104)||(1241866-1241966)
chr3 (22-114)||(5212821-5212914)
chr3 (1-104)||(2782752-2782853)
chr3 (1-104)||(2783142-2783243)
chr3 (22-114)||(21639092-21639183)
chr3 (22-94)||(21640114-21640186)
chr3 (1-104)||(52283061-52283164)
chr3 (1-104)||(50299504-50299609)
chr3 (1-99)||(49669273-49669372)
chr3 (22-104)||(24776322-24776403)
chr3 (1-95)||(53057513-53057607)
chr3 (22-104)||(11222062-11222143)
chr3 (22-104)||(11222814-11222895)
chr3 (10-104)||(14968635-14968729)
chr3 (15-104)||(29952239-29952328)
chr3 (15-104)||(30001393-30001482)
chr3 (24-104)||(22804832-22804912)
chr3 (21-104)||(13823336-13823419)
chr3 (22-104)||(19885887-19885969)
chr3 (10-104)||(25399048-25399146)
chr3 (1-109)||(29854672-29854780)
chr3 (35-104)||(40799156-40799225)
chr3 (1-104)||(47406206-47406308)
chr3 (10-104)||(6089994-6090092)
chr3 (25-104)||(14954676-14954755)
chr3 (22-96)||(20628271-20628345)
chr3 (22-104)||(38178454-38178536)
chr3 (30-104)||(47206929-47207003)
chr3 (26-87)||(22463846-22463907)
chr3 (26-87)||(22465304-22465365)
chr3 (35-87)||(9700861-9700913)
chr3 (10-104)||(12727029-12727127)
chr3 (22-104)||(14393804-14393886)
chr3 (35-104)||(31302615-31302684)
chr3 (36-87)||(1728840-1728891)
chr3 (1-32)||(5212922-5212953)
chr3 (22-104)||(8874933-8875016)
chr3 (22-96)||(16031777-16031852)
chr3 (22-80)||(17239738-17239796)
chr3 (22-104)||(19889748-19889830)
chr3 (22-104)||(33582485-33582567)
chr3 (35-104)||(52919690-52919760)
chr3 (55-104)||(18122490-18122539)
chr3 (21-73)||(20645451-20645504)
chr3 (22-71)||(28581380-28581429)
chr3 (55-96)||(49554352-49554393)
[»] chr7 (56 HSPs)
chr7 (1-104)||(12175125-12175228)
chr7 (22-114)||(15705306-15705398)
chr7 (1-114)||(33421008-33421122)
chr7 (1-114)||(8182210-8182330)
chr7 (10-102)||(4832121-4832216)
chr7 (1-114)||(27870971-27871088)
chr7 (22-105)||(9710646-9710729)
chr7 (22-104)||(16546150-16546231)
chr7 (22-104)||(16619431-16619512)
chr7 (22-114)||(15574417-15574512)
chr7 (22-104)||(35954723-35954805)
chr7 (10-104)||(41843220-41843316)
chr7 (22-114)||(1292306-1292398)
chr7 (15-110)||(4820743-4820839)
chr7 (24-104)||(13473301-13473381)
chr7 (1-114)||(48063598-48063715)
chr7 (22-104)||(13034664-13034747)
chr7 (10-96)||(15087825-15087912)
chr7 (10-104)||(21284170-21284268)
chr7 (1-101)||(28623146-28623244)
chr7 (22-104)||(12367569-12367651)
chr7 (22-104)||(16317408-16317490)
chr7 (21-107)||(14424568-14424656)
chr7 (22-94)||(14424788-14424860)
chr7 (22-104)||(2266374-2266457)
chr7 (22-104)||(11792134-11792217)
chr7 (10-104)||(48237637-48237729)
chr7 (35-104)||(4493808-4493878)
chr7 (22-96)||(5001674-5001748)
chr7 (39-104)||(21691688-21691754)
chr7 (1-78)||(19340035-19340117)
chr7 (53-110)||(32265553-32265610)
chr7 (1-94)||(48806666-48806764)
chr7 (22-104)||(2499292-2499376)
chr7 (22-78)||(16911694-16911750)
chr7 (22-104)||(2914467-2914550)
chr7 (21-104)||(19328822-19328904)
chr7 (22-104)||(22580065-22580148)
chr7 (35-98)||(24795532-24795595)
chr7 (22-105)||(33692534-33692617)
chr7 (54-104)||(13879407-13879457)
chr7 (35-104)||(14186950-14187020)
chr7 (35-96)||(13138750-13138811)
chr7 (1-78)||(21382215-21382297)
chr7 (21-104)||(13731486-13731570)
chr7 (24-104)||(16155554-16155634)
chr7 (10-96)||(30025206-30025296)
chr7 (1-32)||(15574366-15574397)
chr7 (1-32)||(15705273-15705304)
chr7 (10-104)||(9069024-9069121)
chr7 (22-104)||(16557423-16557504)
chr7 (22-104)||(16608158-16608239)
chr7 (35-105)||(23280800-23280870)
chr7 (1-47)||(330973-331021)
chr7 (22-102)||(13259255-13259335)
chr7 (26-94)||(19711827-19711895)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-114)||(16451-16568)
[»] scaffold0280 (2 HSPs)
scaffold0280 (22-114)||(3446-3538)
scaffold0280 (1-32)||(3403-3434)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-114)||(210660-210776)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-113)||(5389-5502)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-94)||(88336-88433)
[»] chr5 (38 HSPs)
chr5 (1-94)||(35932772-35932869)
chr5 (1-111)||(9088227-9088342)
chr5 (28-114)||(28138852-28138937)
chr5 (22-114)||(30116664-30116757)
chr5 (35-99)||(3246267-3246331)
chr5 (35-114)||(15516221-15516300)
chr5 (35-114)||(26764724-26764803)
chr5 (22-104)||(23880276-23880358)
chr5 (22-104)||(30742203-30742285)
chr5 (1-114)||(10848025-10848144)
chr5 (22-102)||(21075974-21076054)
chr5 (1-94)||(31146369-31146466)
chr5 (10-104)||(6498578-6498675)
chr5 (1-104)||(33932531-33932640)
chr5 (1-94)||(35986998-35987087)
chr5 (1-48)||(4886288-4886335)
chr5 (35-114)||(11993142-11993221)
chr5 (22-86)||(29139214-29139277)
chr5 (29-96)||(12353661-12353728)
chr5 (1-104)||(37395431-37395537)
chr5 (21-104)||(7746484-7746569)
chr5 (22-104)||(31117139-31117223)
chr5 (22-101)||(19546321-19546400)
chr5 (33-104)||(42242871-42242942)
chr5 (35-109)||(13736910-13736984)
chr5 (35-104)||(21100553-21100623)
chr5 (22-104)||(31487472-31487554)
chr5 (22-104)||(33021923-33022005)
chr5 (15-104)||(22000811-22000900)
chr5 (10-104)||(643475-643570)
chr5 (1-32)||(3246206-3246237)
chr5 (1-32)||(29139169-29139200)
chr5 (1-32)||(30742323-30742354)
chr5 (10-104)||(6513206-6513303)
chr5 (35-96)||(13546330-13546392)
chr5 (10-104)||(9399391-9399486)
chr5 (1-87)||(23407411-23407501)
chr5 (22-114)||(28465139-28465230)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-114)||(110333-110447)
scaffold0035 (10-107)||(20214-20313)
[»] scaffold0488 (1 HSPs)
scaffold0488 (1-114)||(11454-11572)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-114)||(35481-35599)
scaffold0056 (1-114)||(26387-26505)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-94)||(1555-1652)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-97)||(145185-145286)
scaffold0011 (1-114)||(66140-66260)
[»] scaffold0217 (2 HSPs)
scaffold0217 (35-114)||(22932-23011)
scaffold0217 (22-105)||(18301-18384)
[»] scaffold0275 (1 HSPs)
scaffold0275 (22-114)||(23882-23973)
[»] scaffold0028 (1 HSPs)
scaffold0028 (15-114)||(24531-24631)
[»] scaffold0439 (1 HSPs)
scaffold0439 (36-114)||(7486-7564)
[»] scaffold0043 (1 HSPs)
scaffold0043 (37-110)||(79137-79210)
[»] scaffold0205 (1 HSPs)
scaffold0205 (22-104)||(715-797)
[»] scaffold0115 (1 HSPs)
scaffold0115 (22-104)||(17597-17679)
[»] scaffold0315 (1 HSPs)
scaffold0315 (10-104)||(7935-8025)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-94)||(6004-6102)
[»] scaffold0859 (1 HSPs)
scaffold0859 (22-101)||(2238-2317)
[»] scaffold0251 (1 HSPs)
scaffold0251 (10-105)||(7095-7190)
[»] scaffold0023 (1 HSPs)
scaffold0023 (22-104)||(102821-102904)
[»] scaffold0007 (2 HSPs)
scaffold0007 (35-104)||(63605-63674)
scaffold0007 (1-94)||(45944-46040)
[»] scaffold0005 (1 HSPs)
scaffold0005 (10-104)||(211625-211722)
[»] scaffold0009 (1 HSPs)
scaffold0009 (22-105)||(83626-83709)
[»] scaffold0290 (1 HSPs)
scaffold0290 (22-104)||(19417-19499)
[»] scaffold0210 (1 HSPs)
scaffold0210 (35-104)||(887-957)
[»] scaffold0163 (1 HSPs)
scaffold0163 (35-104)||(25694-25764)
[»] scaffold0116 (2 HSPs)
scaffold0116 (35-104)||(21710-21780)
scaffold0116 (22-94)||(2742-2814)
[»] scaffold0364 (1 HSPs)
scaffold0364 (22-86)||(5456-5521)
[»] scaffold1359 (1 HSPs)
scaffold1359 (57-107)||(4-54)
[»] scaffold0479 (1 HSPs)
scaffold0479 (35-104)||(9232-9302)
[»] scaffold0146 (1 HSPs)
scaffold0146 (22-80)||(14404-14462)
[»] scaffold0598 (1 HSPs)
scaffold0598 (35-94)||(2561-2621)
[»] scaffold0334 (1 HSPs)
scaffold0334 (35-95)||(7170-7230)
[»] scaffold0161 (2 HSPs)
scaffold0161 (21-87)||(10867-10935)
scaffold0161 (21-87)||(15531-15599)
[»] scaffold0120 (1 HSPs)
scaffold0120 (10-80)||(37490-37557)


Alignment Details
Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 20581335 - 20581242
Alignment:
Q  213 ttctttttcttgctctctttgttagtttatctgctatgaaattgaaaaataaattcccaataataattattaaagcattatcttatgaaatgca 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20581335 ttctttttcttgctctctttgttagtttatctgctatgaaattgaaaaataaattcccaataataattattaaagcattatcttattaaatgca 20581242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34322662 - 34322775
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||  ||||| || |||||||||    
T  34322662 ataaattgcttgtgtatttcttctctctctctgttttatccgctacaattagttctgaacatctcttcagaagtagaactacatctgtttttgatctgtg 34322761  T
Q  101 tttttagttaggag 114  Q
    |||| |||||||||    
T  34322762 ttttcagttaggag 34322775  T

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Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 40331480 - 40331388
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctg 93  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||| |||||| |||||    
T  40331480 ataaattgcttgtgtctttcttctctctctctgttttatccgctgcagttagttctgatcatctcttcagaagtagaactctatctgcttctg 40331388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 16494717 - 16494620
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||||||    ||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||    
T  16494717 ataaattgcttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgcttctga 16494620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22801841 - 22801738
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||| |||||||||||| |||||| || | ||| |||    
T  22801841 ataaattgattgtgtctttcttctctctctctgttttatccgctgcaactagttctgaacatcactttagaagtagaactctatctgcttataatcagtg 22801742  T
Q  101 tttt 104  Q
    ||||    
T  22801741 tttt 22801738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 28551649 - 28551747
Alignment:
Q  1 ataaattgcttgtgtctttcttctct----ctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||||    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  28551649 ataaattgcttgtgtctttcttctctatctctctctgtttttatccgctgcaattagttctgaacatctcttcagaagtagaactctatctgcttctga 28551747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1587762 - 1587880
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct------ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||||||      ||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||    
T  1587762 ataaattgcttgtgtctttcttctctcttcctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactctatctgcttctga 1587860  T
Q  95 tctgtgtttttagttaggag 114  Q
      ||| |||| |||||||||    
T  1587861 cttgtattttcagttaggag 1587880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40331157 - 40331042
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct--gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg 98  Q
    |||||||||||||||||||||||||||||| |  | ||||||||||||| ||| |||| | ||||||||||||||||||||| |||||| || ||| |||    
T  40331157 ataaattgcttgtgtctttcttctctctctatcagttttatccgctgcagttagttctaatcatctcttcagaagtagaactctatctgcttatgaactg 40331058  T
Q  99 tgtttttagttaggag 114  Q
      ||||||||||||||    
T  40331057 catttttagttaggag 40331042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44839803 - 44839686
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||||||||    ||||| ||||||||||||| ||| |||||||||||| ||||||||||||||| |||||| |||| | |    
T  44839803 ataaattgcttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatcttttcagaagtagaactctatctgcttctaaac 44839704  T
Q  97 tgtgtttttagttaggag 114  Q
    ||  |||| |||||||||    
T  44839703 tgcattttcagttaggag 44839686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22786385 - 22786475
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgc----tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctg 87  Q
    ||||||||| |||||||||||||||||||||||     ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  22786385 ataaattgcatgtgtctttcttctctctctctgtgtgttttatccgctgcaattagttctgaacgtctcttcagaagtagaactctatctg 22786475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 22782386 - 22782450
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatct 86  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  22782386 tctctctctctgttttatccgctgcaattagttctgaacgtctcttcagaagtagaactttatct 22782450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31968512 - 31968602
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||| | |||||| ||||||    
T  31968512 ataaattgcttgtgt---tcttctctctctctgttttatccgctgcaattagttctgaacttctattcagaagtagaattctatctgcttctga 31968602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 39038381 - 39038476
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattc-tgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||| ||||||||||||||||||| |||||||||||||||| | || |||||||| ||||||||||| |||| |||||| |||||||| |||||||    
T  39038381 ttgtatctttcttctctctctctgttttatccgctgcaatttagtcttgaacatcacttcagaagtataactctatctgcttctgatcagtgtttt 39038476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 6392023 - 6391930
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||||||||| | |||||||||||||| || || |||||||| |||||||||||||||| ||| || |||||||| |||||||    
T  6392023 ttgtgtctttcttctctctctccg-tttatccgctgcaagtagttatgaacatcacttcagaagtagaactctatatgcttctgatcagtgtttt 6391930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 10010491 - 10010586
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgc-aattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||||||||||| |||||||||||| | ||| ||||||||||| ||| ||||| |||||| ||| || |||||||| |||||||    
T  10010491 ttgtgtctttcttctctctctctgttttatccgctgctatttagttctgaacatcactttagaagcagaactctatttgcttctgatcagtgtttt 10010586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 24851426 - 24851508
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||| | || ||||||||||||| ||| ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  24851426 tctctctgtgtgttttatccgctgcatttagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 24851508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 45087747 - 45087833
Alignment:
Q  18 ttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| || | |||||| |||||||| |||||||    
T  45087747 ttcttctctctctctgttttatccgttgcaactagttctgaacatcacttcagaagtataaatctatctgcttctgatcagtgtttt 45087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 25188759 - 25188666
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||||||||| |  ||||||||||||||||| || || |||||| |||||||||| ||||| |||||| |||||||| |||||||    
T  25188759 ttgtgtctttcttctctctctgt--tttatccgctgcaattagatcctaaacatcacttcagaagtggaactctatctgcttctgatcagtgtttt 25188666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 28701979 - 28702060
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||||||||||||| || ||||||||||| |||||||||||||||| ||| || |||||||| |||||||    
T  28701979 tctctctctcta-tttatccgctgcaactagttctgaacatcacttcagaagtagaactctatttgcttctgatcagtgtttt 28702060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 31801628 - 31801721
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||||||||||| |||||| ||| ||| || ||||||||||| ||| | ||| |||||| |||||| |||||||| |||||||    
T  31801628 ttgtgtctttcttctctctctctg-tttatctgctacaagtagttctgaacatcactttaaaagcagaactctatctgcttctgatcagtgtttt 31801721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 22188874 - 22188943
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||  || ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  22188874 tttatccgctgcatctagttctgaacatcacttcagaagtagaactatatctgcttctgatcagtgtttt 22188943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 26367147 - 26367235
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||| ||||||||||  ||||||||| ||||||||||||||||| | ||||| ||| ||||||||||| |||| |||||| ||||||||    
T  26367147 ttgtatctttcttctttctctctctgttttatccgctgcaattagtcctgaatatcacttcagaagtaaaactctatctgcttctgatc 26367235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 22316953 - 22316856
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    |||||||||||||||  ||||||||  |||||||||||||  || || |||||| | |||||||||| ||||| |||||| |||||||| ||||||||    
T  22316953 ttgtgtctttcttctttctctctctattttatccgctgcatatagttatgaacaccacttcagaagtggaactatatctgcttctgatcagtgttttt 22316856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 24778677 - 24778595
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||||||||| ||| | ||||||||| ||||||||| | |||| ||| || |||||||| |||||||    
T  24778677 tctctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagcataactctatttgcttctgatcagtgtttt 24778595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 31328727 - 31328820
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||| |||||||||||||| ||||||||||| |||  |||||| ||||||||||| |||| | | ||||||| || ||||||    
T  31328727 tctctctctctgtttttatccgctgcaattagttctgaacatcacttatgaagtaaaactttatctgcttctaaacagtgttttcagataggag 31328820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 31335448 - 31335541
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||| |||||||||||||| ||||||||||| |||  |||||| ||||||||||| |||| | | ||||||| || ||||||    
T  31335448 tctctctctctgtttttatccgctgcaattagttctgaacatcacttatgaagtaaaactttatctgcttctaaacagtgttttcagataggag 31335541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20152732 - 20152830
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| | || || ||||     |||||||||||||||| |||||| |||||||  ||    
T  20152732 ataaattgctttgtgtctttcttctctctctctg-tttatccgctgcgactagttttgaa-----cttcagaagtagaactctatctgcttctgattagt 20152825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 22455699 - 22455795
Alignment:
Q  10 ttgtgtctttcttctctctctctgcttt-atccgctgcaattaattc-tgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||| |||||  ||| ||| ||||||||| | || |||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  22455699 ttgtgtctttctcctctttctctctttttatctgctgcaatttagtcatgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 22455795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 13964768 - 13964819
Alignment:
Q  53 ttctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||| | ||||||||||||||||||||||| |||||||| |||||||    
T  13964768 ttctgaacaccacttcagaagtagaactttatctgcttctgatcagtgtttt 13964819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 21537940 - 21538011
Alignment:
Q  21 ttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttct 92  Q
    ||||||||||||| |||||| |||||| ||| |  |||||||| |||||||||||||||| |||||| ||||    
T  21537940 ttctctctctctgttttatctgctgcatttagtcatgaacatcacttcagaagtagaactctatctgcttct 21538011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 23234298 - 23234217
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||| || |||| ||||||  || ||||||||||| ||||||||||| |||| |||||| |||||||| |||||||    
T  23234298 tctctctctct-ctctatctgctgcatctagttctgaacatcacttcagaagtaaaactctatctgcttctgatcagtgtttt 23234217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 28712481 - 28712534
Alignment:
Q  43 ctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||| || ||||||||||| ||||||||||| |||| |||||| ||||||||    
T  28712481 ctgcaactagttctgaacatcacttcagaagtataactctatctgcttctgatc 28712534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44824465 - 44824578
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  44824465 ataaattgtttgtgtctttcttctctctctctgttttatccgctgcaattagttctgaacatctcttcagaagtagaactacatctgcttctgatctgtg 44824564  T
Q  101 tttttagttaggag 114  Q
    |||| |||||||||    
T  44824565 ttttcagttaggag 44824578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14264140 - 14264244
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||| | |||||| || ||||| |||    
T  14264140 ataaattgcttgtgtctttcttctctctctctgttttatccgctgcaactagttctgaacatcacttcagaagtagaattctatctgcttttgatcagtg 14264239  T
Q  101 ttttt 105  Q
    |||||    
T  14264240 ttttt 14264244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 46088363 - 46088246
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||||||||    ||||| ||||||||||||| ||| |||||||||||| ||||||||||||||| |||||| |||||| |    
T  46088363 ataaattgcttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatcttttcagaagtagaactctatctgattctgaac 46088264  T
Q  97 tgtgtttttagttaggag 114  Q
    ||  |||| |||||||||    
T  46088263 tgcattttcagttaggag 46088246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 48570985 - 48571077
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||||||||||||||||| || |||||||||||| |||||||||||| |||||| |||| |||||| |||| |||||||||    
T  48570985 tctctctctctgttttatccgctgcaattagttatgaacatctctttagaagtagaactctatctgtttctaatctgtattttcagttaggag 48571077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10250363 - 10250247
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctct----ctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||| |||||||||||||||||||||    ||| ||||||||||||||||| | ||||||||||||| |||||||||||| ||| || || |||||    
T  10250363 ataaattgtttgtgtctttcttctctctctatctctgttttatccgctgcaattagt-ctgaacatctctttagaagtagaactctatatgcttttgatc 10250265  T
Q  97 tgtgtttttagttaggag 114  Q
    ||| |||| |||||||||    
T  10250264 tgtattttcagttaggag 10250247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 21215382 - 21215479
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||||||||||||||| |||    ||||| ||||||||||||| ||| ||||||||||||||||| |||||||||| |||||| ||||||    
T  21215382 ataaattgcttgtgtctttcttctgtctttctctctgttttatccgctgcatttagttctgaacatctcttcaaaagtagaactctatctgcttctga 21215479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30571574 - 30571456
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgc------tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||| |||||||||||| ||||||||||||       ||||||||||||| ||| |||||||||||||||||||||||||||| || ||| ||||||    
T  30571574 ataaattacttgtgtctttcctctctctctctgtgtgtgttttatccgctgcattta-ttctgaacatctcttcagaagtagaactctacctgcttctga 30571476  T
Q  95 tctgtgtttttagttaggag 114  Q
    ||||| |||| |||||||||    
T  30571475 tctgtattttcagttaggag 30571456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 25449333 - 25449412
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    ||||||||||||||||| ||||||||||| ||||||||||| |||| |||||| |||||||| ||||||| |||||||||    
T  25449333 tttatccgctgcaattagttctgaacatcacttcagaagtataactctatctgcttctgatcagtgttttcagttaggag 25449412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21983970 - 21983873
Alignment:
Q  1 ataaattgcttgtgtctttct----tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||  ||||||||||||    ||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||    
T  21983970 ataaattttttgtgtctttcttttctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgcttctga 21983873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 2834002 - 2833920
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || ||||||||||| ||||||||||||| || |||||| |||||||| |||||||    
T  2834002 tctctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagagctctatctgcttctgatcagtgtttt 2833920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21121770 - 21121853
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaact 80  Q
    |||||||| ||||||| |||||||||||    ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  21121770 ataaattgtttgtgtccttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaact 21121853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 23037256 - 23037338
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || | ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  23037256 tctctctctctgttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 23037338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 32786670 - 32786752
Alignment:
Q  21 ttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttt 103  Q
    ||||||||||||| |||||||||||||  |||||  ||||||| |||||||||| |||||||||||| |||||||| ||||||    
T  32786670 ttctctctctctgttttatccgctgcatctaattacgaacatcacttcagaagtggaactttatctgcttctgatcagtgttt 32786752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 21135865 - 21135983
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||| |||||||| |||||||||||    ||||| ||||||||||| | ||| ||||||||||||||||||||||||||||  ||||| |||||| |    
T  21135865 ataaattacttgtgtccttcttctctctttctctctgttttatccgctgtatttagttctgaacatctcttcagaagtagaactcgatctgcttctgaac 21135964  T
Q  97 tgtgttttt-agttaggag 114  Q
    ||  ||||| |||||||||    
T  21135965 tgcatttttcagttaggag 21135983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 21205596 - 21205664
Alignment:
Q  26 tctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||| |||||| ||||||    
T  21205596 tctctctgttttatccgctgcatttagttctgaacatctcttcaaaagtagaactctatctgcttctga 21205664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29215170 - 29215064
Alignment:
Q  1 ataaattg-cttgtgtctttcttctctct--ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatct 97  Q
    |||||||| ||||||||| ||||||||||  ||||| |||||||||||||  || ||||||| ||| |||||||||| ||||| |||||| ||||||||     
T  29215170 ataaattgtcttgtgtctctcttctctctttctctgttttatccgctgcatctagttctgaatatcacttcagaagtggaactctatctgcttctgatca 29215071  T
Q  98 gtgtttt 104  Q
    |||||||    
T  29215070 gtgtttt 29215064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 10756789 - 10756717
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttat 84  Q
    ||||||||||||||||||||| |  ||||||||||||| ||| ||||||||||| || ||||||||||| |||||    
T  10756789 ttgtgtctttcttctctctctgt--tttatccgctgcatttagttctgaacatcactccagaagtagaattttat 10756717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 2266432 - 2266350
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || || |  ||||| |||||||||||||||| |||||| |||||||| |||||||    
T  2266432 tctctctctctgttttatccgctgcatctagttatatacatcacttcagaagtagaactctatctgattctgatcagtgtttt 2266350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 30892411 - 30892329
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||||||| |||| ||| ||||||||||| ||| |||||||||||| ||| || |||||||| |||||||    
T  30892411 tctctctctctattttatccgttgcatttagttctgaacatcactttagaagtagaactctatttgcttctgatcagtgtttt 30892329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 26702845 - 26702917
Alignment:
Q  10 ttgtgtctttcttctct--ctctctgctttatccgctgcaat-taattctgaacatctcttcagaagtagaac 79  Q
    |||| ||||||||||||  ||||||| ||||||||||||||| || ||||||||||| |||||||||||||||    
T  26702845 ttgtatctttcttctctttctctctgttttatccgctgcaatctagttctgaacatcacttcagaagtagaac 26702917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 1577196 - 1577113
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||| ||||||||||  || | || |||||| |||||||||||||||| |||||| |||||||| |||||||    
T  1577196 tctctctctctgtttttatccgctgcatctagtcctaaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 1577113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 22600918 - 22600993
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||| ||| ||||||||||  || | ||||||||| |||||||||||||||| |||||| ||||||||    
T  22600918 tctctctctctgtttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgattctgatc 22600993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 22428083 - 22428153
Alignment:
Q  35 tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||| ||||||| ||| |||||||||||  ||||||||||||||| |||||| |||||||| |||||||    
T  22428083 tttatctgctgcaagttagttctgaacatcatttcagaagtagaactctatctgcttctgatcagtgtttt 22428153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 38281676 - 38281627
Alignment:
Q  55 ctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  38281676 ctgaacatcacttcagaagtagaactatatctgtttctgatcagtgtttt 38281627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 42283974 - 42283933
Alignment:
Q  37 tatccgctgcaattaattctgaacatctcttcagaagtagaa 78  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  42283974 tatccgctgcatttagttctgaacatctcttcagaagtagaa 42283933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 22153174 - 22153098
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||| ||| ||||||||||| ||  | ||||||||| |||||||||||||||| |||||| ||||||||    
T  22153174 tctctctctctgtttttatccgctgcaagtttgtcctgaacatcacttcagaagtagaactctatctgcttctgatc 22153098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 37640343 - 37640287
Alignment:
Q  36 ttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttct 92  Q
    ||||||||||||  || |||||||||||| ||||||||||||||| |||||| ||||    
T  37640343 ttatccgctgcatctagttctgaacatctattcagaagtagaactctatctgcttct 37640287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 1899694 - 1899611
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||| ||||||||||  || |  |||||||| ||| |||||||||||| |||||| |||||||| |||||||    
T  1899694 tctctctctctgtttttatccgctgcatctagtcatgaacatcactttagaagtagaactctatctgcttctgatcagtgtttt 1899611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 28493052 - 28493135
Alignment:
Q  22 tctctctctctgctttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||  | ||| ||||||| ||| ||||||||| |||||| ||| || || |||||||||||||    
T  28493052 tctctctctctgttttatccgctgttacttagttctgaaaatcacttcagaagcagaactctatttgcttatgatctgtgtttt 28493135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2823 - 2709
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||  ||||| |||||||||||    
T  2823 ataaattgcttgtgtctttcttctctctctctgtttttatccgctgcaattagttctggacatctcttcagaagtagaactcaatctgcttctgatctgt 2724  T
Q  100 gtttttagttaggag 114  Q
    ||||| |||||||||    
T  2723 gttttcagttaggag 2709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 36104707 - 36104593
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||  ||||| |||||||||||    
T  36104707 ataaattgcttgtgtctttcttctctctctctgtttttatccgctgcaattagttctggacatctcttcagaagtagaactcaatctgcttctgatctgt 36104608  T
Q  100 gtttttagttaggag 114  Q
    ||||| |||||||||    
T  36104607 gttttcagttaggag 36104593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14990263 - 14990341
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaact 80  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||    
T  14990263 ataaattgcttgtgtctttcttctctctctctgttttatccgctgcaatt-agtctgaacatctcttcagaagtagaact 14990341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6407125 - 6407009
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctct----ctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||||||||||    ||| ||||||||||||||||| | |||||| |||||| |||||||||||| |||||| ||||||||    
T  6407125 ataaattgcttgtgtctttcttctctctctatctctgttttatccgctgcaattagt-ctgaacttctctttagaagtagaactctatctgcttctgatc 6407027  T
Q  97 tgtgtttttagttaggag 114  Q
    ||| |||| |||||||||    
T  6407026 tgtattttcagttaggag 6407009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 22673116 - 22673025
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  22673116 tctctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggag 22673025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14990874 - 14990990
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct----gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||| |||||||||||||||||||||    | ||||||||||||||||| | |||||||||||||||||||||||||| ||| || |||||| |    
T  14990874 ataaattgctggtgtctttcttctctctctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactctatatgcttctgacc 14990972  T
Q  97 tgtgtttttagttaggag 114  Q
    ||| |||| |||||||||    
T  14990973 tgtattttcagttaggag 14990990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 18152514 - 18152601
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagtta 110  Q
    |||||||||||| |||||||||| |||||| | |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  18152514 tctctctctctgttttatccgctacaattagt-ctgaacatctcttcagaagtagaactctatctgcttctgatctgtatttttagtta 18152601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 9319926 - 9319831
Alignment:
Q  10 ttgtgtctttcttctctctctctgc-tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||||||||||   |||||||||||||| || ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  9319926 ttgtgtctttcttctctctctctctgtttatccgctgcaagtagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 9319831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13431403 - 13431498
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttct 92  Q
    |||||||| |||||||||||||||||||    ||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||    
T  13431403 ataaattgtttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgcttct 13431498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 22662411 - 22662320
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||| |||||| ||||||||||| |||||  |||||||    
T  22662411 tctctctctctgttttatccgctgcaatttgt-ctgaacatctcttcagaagtagaactctatctgcttctgatctgtatttttgtttaggag 22662320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 40846213 - 40846305
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| |||||||||| |||||| ||||||||||||| ||| ||||| |||| |||||| ||||||||||| |||| |||||||||    
T  40846213 tctctctctctgttttatccgctacaattagttctgaacatctcctcataagtataactctatctgcttctgatctgtattttcagttaggag 40846305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1744554 - 1744460
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg 98  Q
    ||||||||||||||||| |||||||||| | |   |||||||||||| ||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  1744554 ataaattgcttgtgtctctcttctctctgttt---ttatccgctgcatttagttctgaacatctcttcagaagtagaattctatctgcttctgatctg 1744460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 17796758 - 17796676
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||| || ||||||||||| ||||||||||| |||| |||||| |||||||| |||||||    
T  17796758 tctctctctctgttttatccgctgcaactagttctgaacatcacttcagaagtataactctatctgcttctgatcagtgtttt 17796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 43639095 - 43639003
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||| |||||| || ||| |||  |||| |||||||||    
T  43639095 tctctctctctgttttatccgctgcatttagttctgaacttctcttcagaagtagaactctatctgcttatgaactgcattttcagttaggag 43639003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15336872 - 15336989
Alignment:
Q  1 ataaattgctt-gtgtctttcttc--tctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||| ||||||||||||  |||||||||| ||| ||||||||||| || ||||||||||| ||||||||| |||||| |||||| | ||||||    
T  15336872 ataaattgctttgtgtctttcttccttctctctctgtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactctatctgctcctgatc 15336971  T
Q  97 tgtgtttttagttaggag 114  Q
     ||| ||| |||||||||    
T  15336972 agtgatttcagttaggag 15336989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15425937 - 15426054
Alignment:
Q  1 ataaattgctt-gtgtctttcttc--tctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||| ||||||||||||  |||||||||| ||| ||||||||||| || ||||||||||| ||||||||| |||||| |||||| | ||||||    
T  15425937 ataaattgctttgtgtctttcttccttctctctctgtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactctatctgctcctgatc 15426036  T
Q  97 tgtgtttttagttaggag 114  Q
     ||| ||| |||||||||    
T  15426037 agtgatttcagttaggag 15426054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15517241 - 15517358
Alignment:
Q  1 ataaattgctt-gtgtctttcttc--tctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||| ||||||||||||  |||||||||| ||| ||||||||||| || ||||||||||| ||||||||| |||||| |||||| | ||||||    
T  15517241 ataaattgctttgtgtctttcttccttctctctctgtttttatccgctgcaaatagttctgaacatcacttcagaagcagaactctatctgctcctgatc 15517340  T
Q  97 tgtgtttttagttaggag 114  Q
     ||| ||| |||||||||    
T  15517341 agtgatttcagttaggag 15517358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 23185558 - 23185638
Alignment:
Q  24 tctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||| |||||||||| ||  || ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  23185558 tctctctctgttttatccgctacatctagttctgaacatcgcttcagaagtagaactctatctgcttctgatcagtgtttt 23185638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 45292212 - 45292115
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgc----tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||| ||||||||| |||||||||| ||| |    |||||||||||||  || |||||||||||||||||||||||||||| |||||| ||||||    
T  45292212 ataaattacttgtgtctctcttctctctttctccctgttttatccgctgcatctagttctgaacatctcttcagaagtagaactatatctgcttctga 45292115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 30422240 - 30422322
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || ||| ||||||| |||||||||||||||| ||| || |||||||| |||||||    
T  30422240 tctctctctctgttttatccgctgcatctagttcagaacatcacttcagaagtagaactctatttgcttctgatcagtgtttt 30422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 16206559 - 16206490
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||  || | ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  16206559 tttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 16206490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 17442670 - 17442739
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||  || ||||||||||| |||||||||||||||| ||| || |||||||| |||||||    
T  17442670 tttatccgctgcatctagttctgaacatcacttcagaagtagaactctatttgcttctgatcagtgtttt 17442739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 18321949 - 18322021
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaact 80  Q
    |||||||||||||||  ||||||||| ||||||||||||| ||| | ||||||||| | ||||||||||||||    
T  18321949 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacctcagaagtagaact 18322021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 45539307 - 45539376
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  45539307 tttatccgctgcatcttgttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 45539376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 21932217 - 21932134
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    |||||||||||| ||||||| |||||  || ||||||||||  |||||||||| || || |||||| |||||||| ||||||||    
T  21932217 tctctctctctgttttatccactgcatctagttctgaacattacttcagaagtggatctctatctgcttctgatcagtgttttt 21932134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 20383160 - 20383242
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  ||||||||||||| ||| | ||||||||| ||||||||| | |||||||| || |||||||  |||||||    
T  20383160 tctctctctctattttatccgctgcatttagtcctgaacatcacttcagaagcataactttatttgcttctgattagtgtttt 20383242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 31445411 - 31445361
Alignment:
Q  54 tctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  31445411 tctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 31445361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 18679172 - 18679100
Alignment:
Q  10 ttgtgtctttcttctctct--ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaact 80  Q
    |||||||||||||||||||  ||||  |||||| |||||| ||| ||||||||||| ||||||||| ||||||    
T  18679172 ttgtgtctttcttctctctttctctattttatctgctgcatttagttctgaacatcacttcagaagcagaact 18679100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 18718361 - 18718289
Alignment:
Q  10 ttgtgtctttcttctctct--ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaact 80  Q
    |||||||||||||||||||  ||||  |||||| |||||| ||| ||||||||||| ||||||||| ||||||    
T  18718361 ttgtgtctttcttctctctttctctattttatctgctgcatttagttctgaacatcacttcagaagcagaact 18718289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33560998 - 33561096
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||| |||||| |||||||||    ||||| ||| ||||||||||  || |||||||||| | ||||||||||||||| |||||| ||||||    
T  33560998 ataaattgcttatgtcttgcttctctctttctctctgtttttatccgctgcatctagttctgaacatttattcagaagtagaactctatctgcttctga 33561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 43773448 - 43773391
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttct 92  Q
    |||||||||||||  || |||||||||| | |||||||||||||||||||||| ||||    
T  43773448 tttatccgctgcatctagttctgaacatttattcagaagtagaactttatctgcttct 43773391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 15934454 - 15934542
Alignment:
Q  10 ttgtgtctttcttctctctctctg-ctttatccgctgcaattaat-tctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||||  |||||||| |||| ||| | |||||||||| ||| |||||| ||||| |||||| || |||||    
T  15934454 ttgtgtctttcttctctctctctgtttttatccgttgcatttactatctgaacatcactttagaagttgaactctatctgcttttgatc 15934542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 25163414 - 25163330
Alignment:
Q  21 ttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||| ||| |||||||||||||| | | ||||||| ||||||||| |||||| | | || |||||||| |||||||    
T  25163414 ttctctctctctgtttttatccgctgcaattagtccggaacatcacttcagaagcagaactctgtttgcttctgatcagtgtttt 25163330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 18121941 - 18122016
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||| ||| ||||||||||  || | |||| |||| |||||||||||||||| |||||| ||||||||    
T  18121941 tctctctctctgtttttatccgctgcatctagtcctgatcatcacttcagaagtagaactctatctgcttctgatc 18122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18152459 - 18152490
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  18152459 ataaattgcttgtgtctttcttctctctctct 18152490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 35028318 - 35028369
Alignment:
Q  53 ttctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||| ||||| |||||||||| |||||| |||||||| |||||||    
T  35028318 ttctgaacatcacttcataagtagaactatatctgtttctgatcagtgtttt 35028369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 18772035 - 18771962
Alignment:
Q  22 tctctctctctgctttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||| |||||||||| || ||| ||||||||||||  ||||||||| ||||| ||| || ||||||    
T  18772035 tctctctctctgttttatccgctacatttagattctgaacatcaattcagaagttgaactctatgtgcttctga 18771962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 20256320 - 20256404
Alignment:
Q  21 ttctctctctctgctttatccgctgc-aattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||| |||||||||||| | ||| || || | ||| ||||||||| |||||| ||| || |||||||| |||||||    
T  20256320 ttctctctctctgttttatccgctgctatttagttttggaaatcacttcagaagcagaactctatttgcttctgatcagtgtttt 20256404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3106160 - 3106273
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| |||||| |||||| |||      
T  3106160 ataaattgcttgtgtctttcttctctctctctgttttatccgctgcaattagttatgaacatctcttcagaagtagaactctatctgcttctgaactgca 3106259  T
Q  101 tttttagttaggag 114  Q
    |||| |||||||||    
T  3106260 ttttcagttaggag 3106273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6516857 - 6516736
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgc-------tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttct 92  Q
    ||||||||||||||||||||||||||||||||         |||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||    
T  6516857 ataaattgcttgtgtctttcttctctctctctctctctgtttttatccgctgcaagttatttctgaacatctcttcagaagtagaactctatctgcttct 6516758  T
Q  93 gatctgtgtttttagttaggag 114  Q
    ||||||| |||| |||||||||    
T  6516757 gatctgtattttcagttaggag 6516736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29120735 - 29120630
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctct--gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatct 97  Q
    ||||||||||| |||||| ||||||||||||||  |||| |||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||     
T  29120735 ataaattgctttgtgtctctcttctctctctctatgctt-atccgctgcaattagttctgaacatcacttcagaagtagaactctatctgcttctgatca 29120637  T
Q  98 gtgtttt 104  Q
    |||||||    
T  29120636 gtgtttt 29120630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 16939321 - 16939230
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||||||||||||||||| | |||||||||||||||| |||| |||| |||||| ||||||||||| |||| |||||||||    
T  16939321 tctctctctctgttttatccgctgcaattagt-ctgaacatctcttcaggagtataactctatctgcttctgatctgtattttcagttaggag 16939230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 13576913 - 13576996
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    |||||||||||| |||||||||||||  || ||||||||||| |||||||||||||||| |||||| |||||||| ||||||||    
T  13576913 tctctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttt 13576996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 23749884 - 23749788
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||  ||||||||| ||||||||||||| ||| | ||||||||| |||||||||||||||| |||||  |||||||| |||||||    
T  23749884 ttgtgtctttcttctttctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagtagaactctatctacttctgatcagtgtttt 23749788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 55379670 - 55379574
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||  ||||||||| ||||||| ||||| ||| |  |||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  55379670 ttgtgtctttcttctttctctctctgttttatccactgcatttagtcttgaacatcacttcagaagtagaactttatctgcttctgatcagtgtttt 55379574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22190215 - 22190126
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct----gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatct 86  Q
    |||||||||||||||||||||||||||| |||    | ||||||||||||| ||| || ||||||||||||||||||||||||| |||||    
T  22190215 ataaattgcttgtgtctttcttctctctttctctttgttttatccgctgcatttagttatgaacatctcttcagaagtagaactctatct 22190126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8103654 - 8103580
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagta 75  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||||||    
T  8103654 ataaattgctttgtgtctttcttctctctctctg-tttatccgctgcaattagttatgaacatcacttcagaagta 8103580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 17246954 - 17246872
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||||| |||  || ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  17246954 tctctctctctgttttatccgccgcatctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 17246872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 17399445 - 17399517
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||| |||| |||||||||||||  || |||||||||||||||||||||||||||| |||||| ||||||    
T  17399445 tctctctatctgttttatccgctgcatctagttctgaacatctcttcagaagtagaactctatctgcttctga 17399517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 16852817 - 16852742
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||| ||| |||||||||| ||| ||||||||||  ||||||||||||||||||||||| ||||||||    
T  16852817 tctctctctctgtttttatccgctgcatttagttctgaacattacttcagaagtagaactttatctgcttctgatc 16852742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3500392 - 3500483
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgct-ttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctg 87  Q
    ||||||||| ||||||||||||||||||    ||||| | |||||||||||| ||| ||||||||||| |||||||||||||||| ||||||    
T  3500392 ataaattgcctgtgtctttcttctctctttctctctgttcttatccgctgcatttagttctgaacatcccttcagaagtagaactctatctg 3500483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 22676325 - 22676407
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || | ||||||||| ||||| |||||||||| |||||| |||||||| |||||||    
T  22676325 tctctctctctgttttatccgctgcatctagtcctgaacatcacttcaaaagtagaactctatctgcttctgatcagtgtttt 22676407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 37436274 - 37436377
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||| ||||||||||||||||||| |  ||||| ||||||   || ||||||||||| ||||| |||||||||| |||||| |||||||| ||    
T  37436274 ataaattgctttgtgtctttcttctctctctgtt-tttattcgctgcttctagttctgaacatcacttcataagtagaactctatctgcttctgatcagt 37436372  T
Q  100 gtttt 104  Q
    |||||    
T  37436373 gtttt 37436377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 8686194 - 8686281
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||||||||| ||||| ||||||||||||| ||| | |||||||||| ||||| ||| ||||||  ||||| ||||||||    
T  8686194 ttgtgtctttcttctctcgctctgttttatccgctgcatttagaatctgaacatcacttcaaaagcagaactcaatctgcttctgatc 8686281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 15135064 - 15134981
Alignment:
Q  22 tctctctctctgctttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||||||||||||| || ||||||||| ||| |||||| ||||| ||| || |||||||| |||||||    
T  15135064 tctctctctctgttttatccgctgcaattagatcctgaacatcactttagaagtggaactctatttgcttctgatcagtgtttt 15134981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14154737 - 14154783
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgca 47  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||    
T  14154737 ataaattgcttgtgtctttcttctctttctctgttttatccgctgca 14154783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 19621755 - 19621837
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||| |||||| ||||||||||||| ||| ||||||||||| ||| ||||| |||||||||| || || ||||| |||||||    
T  19621755 tctctttctctgttttatccgctgcatttagttctgaacatcactttagaagcagaactttatttgcttttgatccgtgtttt 19621837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 54679205 - 54679123
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  |  || |||||||| |||||||||||||||| |||||| || ||||| |||||||    
T  54679205 tctctctctctgttttatccgctgcatcttgttttgaacatcacttcagaagtagaactctatctgcttttgatcagtgtttt 54679123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 14605656 - 14605753
Alignment:
Q  10 ttgtgtctttcttctctctctctg-ctttatccgctgcaa-ttaattctgaacatctcttcag-aagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||| | ||||||||| |||||| |||||||| | |||||| |||||||| |||||||    
T  14605656 ttgtgtctttcttctttctctctgtttttatccgctgcaagttattcctgaacatcacttcagaaagtagaattatatctgcttctgatcagtgtttt 14605753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 27189424 - 27189476
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctg 87  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| | ||||||    
T  27189424 tttatccgctgcatttagttctgaacatctcttcagaagtagaattctatctg 27189476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 12600100 - 12600017
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaa-ttctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||| ||| | ||||  | ||| |||||||||||||||||||| || |||||||| |||||||    
T  12600100 tctctctctctgttttatccgctgctatttagttctagaaatcacttcagaagtagaactttatttgcttctgatcagtgtttt 12600017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 3792664 - 3792607
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttct 92  Q
    ||||||||||| || || ||||||||||| |||||||||||||||| |||||| ||||    
T  3792664 tttatccgctgtaactagttctgaacatcacttcagaagtagaactctatctgcttct 3792607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 24628695 - 24628744
Alignment:
Q  55 ctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  24628695 ctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 24628744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 16847732 - 16847672
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactt 81  Q
    |||||||||||||||| |||||||||| ||| ||||||||||  ||||||||||| |||||    
T  16847732 tctctctctctgcttttatccgctgcatttagttctgaacattacttcagaagtacaactt 16847672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 17701497 - 17701594
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgc----tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||| |||||||||||| ||||| ||| |    |||||||||||||  || || ||||||||| ||||||||| ||||| |||||| ||||||    
T  17701497 ataaattgcctgtgtctttcttttctctttctccctgttttatccgctgcatctagttatgaacatctattcagaagtggaactctatctgcttctga 17701594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 55731174 - 55731118
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaa 78  Q
    |||||||||||| ||||||| |||||| || || |||||||| ||||||||||||||    
T  55731174 tctctctctctgttttatccactgcaactagttttgaacatcacttcagaagtagaa 55731118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 9752320 - 9752379
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||||  || |||||||||| | ||||||||||||||| |||||| ||||||    
T  9752320 tttatccgctgcatctagttctgaacatttattcagaagtagaactctatctgcttctga 9752379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 16939370 - 16939339
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  16939370 ataaattgcttgtgtctttcttctctctctct 16939339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 56533805 - 56533869
Alignment:
Q  3 aaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttca 69  Q
    |||||||||||||||||||  |||||| ||| | |||||||||||| || ||||||||||| |||||    
T  56533805 aaattgcttgtgtctttct--tctctcgctgttctatccgctgcaactagttctgaacatcacttca 56533869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 10071848 - 10071766
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||  |||||  || ||||||||||| |||||||||| ||||| ||| || |||| ||| |||||||    
T  10071848 tctctctctctgttttatctactgcatctagttctgaacatcacttcagaagtggaactctatttgcttcttatcagtgtttt 10071766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 14905102 - 14905164
Alignment:
Q  35 tttatccgctgcaattaattc-tgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||||| | | || |||||||| |||||||||||||||| |||||| ||||||||    
T  14905102 tttatccgctgcaaattagtcatgaacatcacttcagaagtagaactctatctgcttctgatc 14905164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 19611136 - 19611218
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaa-ttctgaacatctcttcagaagtagaactttatctggttctgatctgtgttt 103  Q
    ||||||||| || |||||||||||| ||| | ||||| | ||| ||||||||| |||||| ||| || |||||||||||||||    
T  19611136 tctctctctgtgttttatccgctgctatttagttctggaaatcacttcagaagcagaactctatgtgcttctgatctgtgttt 19611218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 39420475 - 39420564
Alignment:
Q  26 tctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg-tgtttttagttaggag 114  Q
    |||||| | |||||||||||||  || |||||||||||| ||||||||| ||| | |||||| |||||| ||| |  |||||||||||||    
T  39420475 tctctcagttttatccgctgcatctagttctgaacatctattcagaagtggaattctatctgcttctgaactgcttgttttagttaggag 39420564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 56033839 - 56033790
Alignment:
Q  55 ctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||| |||||||||||||||| |||||| |||||||  |||||||    
T  56033839 ctgaacatcacttcagaagtagaactctatctgcttctgataagtgtttt 56033790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 6641045 - 6640960
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaat-tctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||||||||  ||||| |||||||  |||| ||| | |||||||||| |||||||||  ||||| |||||| ||||||||    
T  6641045 ttgtgtctttcttctct--ctctgttttatccattgcatttagtatctgaacatcacttcagaagctgaactctatctgcttctgatc 6640960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 38513227 - 38513187
Alignment:
Q  54 tctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||| ||||||||||||||| |||||| ||||||    
T  38513227 tctgaacatctattcagaagtagaactctatctgcttctga 38513187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18501 - 18614
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| |||||  |||||| |||      
T  18501 ataaattgcttgtgtctttcttctctctctctgttttatccgctgcaatttgttctgaacatctcttcagaagtagaactctatctacttctgaactgca 18600  T
Q  101 tttttagttaggag 114  Q
    |||| |||||||||    
T  18601 ttttcagttaggag 18614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21617621 - 21617507
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    |||||||| |||||||||||||||||||||||  ||| | |||||||||||| || ||||||||||||||||||||||||| |||||| |||||||||||    
T  21617621 ataaattgtttgtgtctttcttctctctctctatttttacccgctgcaattagttatgaacatctcttcagaagtagaactctatctgcttctgatctgt 21617522  T
Q  100 gtttttagttaggag 114  Q
    ||||| |||||||||    
T  21617521 gttttcagttaggag 21617507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22077148 - 22077266
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct------gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||||||||||      | ||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||    
T  22077148 ataaattgcttgtgtctttcttctctctctctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactctatctgcttctga 22077246  T
Q  95 tctgtgtttttagttaggag 114  Q
    ||||| |||| |||||||||    
T  22077247 tctgtattttcagttaggag 22077266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 16333075 - 16332983
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  16333075 tctctctctctgttttatccgctggaattagttctgaacatcacttcagaagtagaactctatctgcttctgatctgtattttcagttaggag 16332983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 19623345 - 19623248
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttag 107  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||| || ||| ||| || |||||||| ||||||||||    
T  19623345 ttgtgtctttcttctttctctctgttttatccgctgcaattagttctgaacatcacttcagaagcaggactctatttgcttctgatcagtgtttttag 19623248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 33353050 - 33353122
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  33353050 tctctctctctgttttatccgctgcaattagttctgaatatctcttcagaagtagaactctatctgcttctga 33353122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 12422574 - 12422495
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||| |||| || |||||||| |||||||||    
T  12422574 tttatccgctgcaattagttctgaacatctcttcagaagtagaactctttctgcttctaatatgtgttttcagttaggag 12422495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 19066803 - 19066889
Alignment:
Q  12 gtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||||||||    ||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||    
T  19066803 gtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgcttctga 19066889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 20113420 - 20113510
Alignment:
Q  10 ttgtgtctttcttctctctctct----gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||||||||||||||    | ||||||||||||| ||| ||||||||||| |||||||||||||||| |||||| ||||||||    
T  20113420 ttgtgtctttcttctctctctctctcagttttatccgctgcatttagttctgaacatcacttcagaagtagaactctatctgcttctgatc 20113510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 19833793 - 19833884
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||||||||||||||||| ||||||||||| ||||||| || | ||| |||||| |||||||| ||||||| |||||||||    
T  19833793 tctctctctctg-tttatccgctgcaattagttctgaacatcacttcagaggtggtactctatctgcttctgatcagtgttttcagttaggag 19833884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 20731509 - 20731591
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || || |||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  20731509 tctctctctctgttttatccgctgcatctagttttgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 20731591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 21234502 - 21234420
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || ||||||||||| |||||||||||||| | |||||| |||||||| |||||||    
T  21234502 tctctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagaattctatctgcttctgatcagtgtttt 21234420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22801515 - 22801404
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgat 95  Q
    ||||||||||| |||||||||||||||||    ||||  |||||||||||||  || ||||||||||| |||||||||||||||| |||||| |||||||    
T  22801515 ataaattgctttgtgtctttcttctctctttctctctcttttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgcttctgat 22801416  T
Q  96 ctgtgtttttag 107  Q
    | ||||| ||||    
T  22801415 cagtgttattag 22801404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 32543609 - 32543527
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || ||||||||||| |||||||||| ||||| |||||| |||||||| |||||||    
T  32543609 tctctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtggaactctatctgcttctgatcagtgtttt 32543527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12348906 - 12348799
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    |||||||||||||||||||||||||||||| |  |||||||| ||||||| | | |||||||||||||| |||||||| | |||||| || ||||||||     
T  12348906 ataaattgcttgtgtctttcttctctctctgt-ttttatccggtgcaatt-agtatgaacatctcttcaaaagtagaattctatctgcttatgatctgta 12348809  T
Q  101 tttttagtta 110  Q
    |||| |||||    
T  12348808 ttttcagtta 12348799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 15986719 - 15986623
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttag 107  Q
    |||||||||||| || |||||||  ||||| ||||||||||| | ||||||||| ||||| |||||||||| |||||| |||||||| ||||||||||    
T  15986719 ttgtgtctttct-ctatctctcttttttatacgctgcaattagtcctgaacatcacttcataagtagaactctatctgtttctgatcagtgtttttag 15986623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16876279 - 16876166
Alignment:
Q  1 ataaattgctt-gtgtctttcttc--tctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||| ||||||||||||  |||||||||| ||| |||||||||| ||| ||||||||||| ||||||||| |||||| |||||  | ||||||    
T  16876279 ataaattgctttgtgtctttcttccttctctctctgtttttatccgctgcatttagttctgaacatcacttcagaagcagaactctatctactcctgatc 16876180  T
Q  97 tgtgtttttagtta 110  Q
     ||||||| |||||    
T  16876179 agtgttttcagtta 16876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 19688078 - 19687997
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||||||||||||  || || |||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  19688078 tctctctctctt-tttatccgctgcatctagttttgaacatcacttcagaagtagaactttatctgcttctgatcagtgtttt 19687997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 17380896 - 17380827
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||| ||| || |||||||| |||||||    
T  17380896 tttatccgctgcaattagttctaaacatcacttcagaagtagaactctatttgcttctgatcagtgtttt 17380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 13435219 - 13435149
Alignment:
Q  35 tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||| ||| | ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  13435219 tttatccgctgcaagttagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 13435149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 25929844 - 25929758
Alignment:
Q  10 ttgtgtctttcttctctctctctg-ctttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||  ||||||||||||| ||| | |||||||||| |||||||||  ||||| |||| ||||||||    
T  25929844 ttgtgtctttcttctctctctctgtttttatccgctgcatttagaatctgaacatcacttcagaagctgaactatatcaggttctga 25929758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 18912776 - 18912688
Alignment:
Q  11 tgtgtctttcttctctct----ctctgct-ttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||    ||||| | |||||||||||| ||| || ||||||||||||||||||||||| | |||||| ||||||    
T  18912776 tgtgtctttcttctctctttctctctgttcttatccgctgcatttagttatgaacatctcttcagaagtagaattctatctgcttctga 18912688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 26588933 - 26588875
Alignment:
Q  36 ttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||  || |||||||||||| ||||||||||||||| |||||| ||||||    
T  26588933 ttatccgctgcatctagttctgaacatctattcagaagtagaactctatctgcttctga 26588875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 18377760 - 18377699
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||||  || ||||||||||| |||||||||||||||| |||||| || |||||    
T  18377760 tttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgtttttgatc 18377699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 18434844 - 18434783
Alignment:
Q  35 tttatccgctgcaat-taattctgaacatctcttcagaagtagaactttatctggttctgat 95  Q
    ||||||||||||||  || ||||||||||| |||||||||||||||| |||||| |||||||    
T  18434844 tttatccgctgcaagctagttctgaacatcacttcagaagtagaactctatctgcttctgat 18434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 15954012 - 15953972
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagta 75  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  15954012 tttatctgctgcaattagttctgaacatctcttcagaagta 15953972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 10631448 - 10631401
Alignment:
Q  57 gaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  10631448 gaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 10631401  T

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Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12422639 - 12422608
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  12422639 ataaattgcttgtgtctttcttctctctctct 12422608  T

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Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 16333116 - 16333085
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  16333116 ataaattgcttgtgtctttcttctctctctct 16333085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 17304056 - 17304143
Alignment:
Q  11 tgtgtctttcttctctctctctgct-ttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||    ||||| |||||| ||| |||||||||||| |||||||||  ||||| |||||| ||||||||    
T  17304056 tgtgtctttcttctctctctctttacttatctgctgcatttagattctgaacatcacttcagaagctgaactctatctgcttctgatc 17304143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 21624439 - 21624356
Alignment:
Q  22 tctctctctctgcttta-tccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||| |||||||||  || | ||||||||| ||||||||||| |||| |||||| |||||||| |||||||    
T  21624439 tctctctctctattttaatccgctgcatctattcctgaacatcacttcagaagtaaaactctatctgcttctgatcagtgtttt 21624356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 24116164 - 24116081
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    |||||||||||| ||||||||||||| ||| |  |||||||  ||||||||| |||||| ||| || |||||| | ||||||||    
T  24116164 tctctctctctgttttatccgctgcatttagtcttgaacattacttcagaagcagaactctatttgcttctgaccagtgttttt 24116081  T

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Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33353001 - 33353032
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  33353001 ataaattgcttgtgtctttcttctctctctct 33353032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 12041194 - 12041133
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||||  || ||||||||||| ||| |||||||||||| |||||| || |||||    
T  12041194 tttatccgctgcatctagttctgaacatcactttagaagtagaactctatctgcttttgatc 12041133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 13601515 - 13601431
Alignment:
Q  21 ttctctctctctgctttatccgctgc-aattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||| |||||| ||||| | ||| ||||| | ||| ||||||||| |||||| ||| || |||||||| |||||||    
T  13601515 ttctctctctctgttttatctgctgctacttagttctggaaatcacttcagaagcagaactctatttgcttctgatcagtgtttt 13601431  T

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Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 30054965 - 30055078
Alignment:
Q  2 taaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgt 101  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||| |||  |    
T  30054965 taaattgctcgtgtctttcttctctctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgcttctgaactgcat 30055064  T
Q  102 tttt-agttaggag 114  Q
    |||| |||||||||    
T  30055065 ttttcagttaggag 30055078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2025463 - 2025348
Alignment:
Q  1 ataaattgcttgtgtctttcttct--ctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg 98  Q
    |||||||| |||||||||||||||  ||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||| |||    
T  2025463 ataaattgtttgtgtctttcttctttctctctctgttttatccgctgcaattagttctgaatatctcttcagaagtagaactctatctgcttctgaactg 2025364  T
Q  99 tgtttttagttaggag 114  Q
      |||| |||||||||    
T  2025363 cattttcagttaggag 2025348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40850351 - 40850233
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||||||||    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| | |||||| |    
T  40850351 ataaattgcttgtgtctttcttctctctttctctctgttttatccgctgcatttaattctgaacatctcttcagaagtagaactctatcggcttctgaac 40850252  T
Q  97 tgtgttttt-agttaggag 114  Q
    ||  ||||| |||||||||    
T  40850251 tgcatttttcagttaggag 40850233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 46797180 - 46797296
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctct----ctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||| |||||||||||||||||||||    ||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||| |||||||     
T  46797180 ataaattgtttgtgtctttcttctctctctatctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactctatctgcttctgatt 46797278  T
Q  97 tgtgtttttagttaggag 114  Q
    ||| |||| |||||||||    
T  46797279 tgtattttcagttaggag 46797296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1241866 - 1241966
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    |||||||||||||||||||||   ||||||||| |||||||||||||| || ||||||||||| |||||||||||||| | |||||| |||||||| |||    
T  1241866 ataaattgcttgtgtctttct---ctctctctgttttatccgctgcaactagttctgaacatcacttcagaagtagaaatctatctgcttctgatcagtg 1241962  T
Q  101 tttt 104  Q
    ||||    
T  1241963 tttt 1241966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 5212914 - 5212821
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||| ||||| |||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  5212914 tctctctctctgtttttatccgttgcaattagttctgaatatctcttcagaagtagaactctatctgcttctgatctgtgttttcagttaggag 5212821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2782853 - 2782752
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    ||||||||||||||||||||  ||||||||||| ||||| |||||||| || ||||||||||| |||||||||||||| | |||||| |||||||| |||    
T  2782853 ataaattgcttgtgtctttc--ctctctctctgttttattcgctgcaactagttctgaacatcacttcagaagtagaattctatctgattctgatcagtg 2782756  T
Q  101 tttt 104  Q
    ||||    
T  2782755 tttt 2782752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2783243 - 2783142
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    ||||||||||||||||||||  ||||||||||| ||||| |||||||| || ||||||||||| |||||||||||||| | |||||| |||||||| |||    
T  2783243 ataaattgcttgtgtctttc--ctctctctctgttttattcgctgcaactagttctgaacatcacttcagaagtagaattctatctgattctgatcagtg 2783146  T
Q  101 tttt 104  Q
    ||||    
T  2783145 tttt 2783142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 21639092 - 21639183
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  21639092 tctctctctctgttttatccgttgcaattagt-ctgaacatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggag 21639183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 21640186 - 21640114
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  21640186 tctctctctctgttttatccgctgcaattagttctgaatatctcttcagaagtagaactttatctgcttctga 21640114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 52283164 - 52283061
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||  || || |||||||| |||||||||||||||| |||||| |||||||| ||    
T  52283164 ataaattgctttgtgtctttcttctctctctctg-tttatccgctgcaggtagttatgaacatcacttcagaagtagaactctatctgcttctgatcagt 52283066  T
Q  100 gtttt 104  Q
    |||||    
T  52283065 gtttt 52283061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 50299609 - 50299504
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct--gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg 98  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||||||| || |||||||||||  ||||||||||||| | |||||| |||||||| |    
T  50299609 ataaattgcttatgtctttcttctctctctctctgttttatccgctgcaactagttctgaacatcagttcagaagtagaaatctatctgcttctgatcag 50299510  T
Q  99 tgtttt 104  Q
    ||||||    
T  50299509 tgtttt 50299504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 49669273 - 49669372
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct--gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg 98  Q
    |||||||| |||||||||||||||||||||||  | ||||||| ||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||||    
T  49669273 ataaattgtttgtgtctttcttctctctctctctgttttatccactgcaattagt-ctgaatatctcttcagaagtagaactctatctgcttctgatctg 49669371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 24776322 - 24776403
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  24776322 tctctctctcta-tttatccgctgcaattagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 24776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 53057513 - 53057607
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgat 95  Q
    ||||||||||| ||||||||| ||||||||| || ||||||||||||||||| || |||||||| |||||||||||||||| |||||  |||||||    
T  53057513 ataaattgctttgtgtctttcatctctctctttg-tttatccgctgcaattagttatgaacatcacttcagaagtagaactctatctacttctgat 53057607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 11222143 - 11222062
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||| || ||||||||||| ||| |||||||||||| |||||| |||||||| |||||||    
T  11222143 tctctctctctg-tttatccgctgcaactagttctgaacatcactttagaagtagaactctatctgcttctgatcagtgtttt 11222062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 11222895 - 11222814
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||| || ||||||||||| ||| |||||||||||| |||||| |||||||| |||||||    
T  11222895 tctctctctctg-tttatccgctgcaactagttctgaacatcactttagaagtagaactctatctgcttctgatcagtgtttt 11222814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 14968729 - 14968635
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||| |||||| ||||||||  |||||||||||||  || | ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  14968729 ttgtgtccttcttcactctctctattttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 14968635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 29952239 - 29952328
Alignment:
Q  15 tctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||| |||||| |||||| |||||||| |||| ||| | ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  29952239 tcttttttctctttctctgttttatccgttgcatttagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 29952328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 30001393 - 30001482
Alignment:
Q  15 tctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||| |||||| |||||| |||||||| |||| ||| | ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  30001393 tcttttttctctttctctgttttatccgttgcatttagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 30001482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 22804832 - 22804912
Alignment:
Q  24 tctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||| |||||||||||||||||   ||||||||| ||||| |||||||||| |||||| |||||||| |||||||    
T  22804832 tctctctctgttttatccgctgcaattagacctgaacatcacttcaaaagtagaactctatctgcttctgatcagtgtttt 22804912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 13823419 - 13823336
Alignment:
Q  21 ttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||| |||||||||||||  || | ||||| ||| |||||||| |||||||||||||| |||||||| |||||||    
T  13823419 ttctctctctctgttttatccgctgcatctagtcctgaagatcacttcagaattagaactttatctgcttctgatcagtgtttt 13823336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 19885887 - 19885969
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||||||||| ||| | ||||||||| |||||||||||||||| ||| || |||||||  |||||||    
T  19885887 tctctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagtagaactctatttgcttctgataagtgtttt 19885969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 25399048 - 25399146
Alignment:
Q  10 ttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||||||    ||||| |||||||||||||  || | ||||||||| |||||||||||||||| |||||| |||||||  |||||||    
T  25399048 ttgtgtctttcttctctctttctctctgttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgcttctgattagtgtttt 25399146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29854780 - 29854672
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||| ||| | |||||||||||||||| |||||| | ||||| || || |||||||| ||||||| |||||||| |||||| |||||||| ||    
T  29854780 ataaattgctttgtgccgttcttctctctctctgatttatctggtgcaactagttttgaacatcacttcagatgtagaactctatctgcttctgatc-gt 29854682  T
Q  100 gtttttagtt 109  Q
    ||||| ||||    
T  29854681 gttttcagtt 29854672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 40799225 - 40799156
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||  || ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  40799225 tttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 40799156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 47406206 - 47406308
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||| ||||||||||||||||||| |  |||||||||||||  || ||||||||||| ||||| |||||| ||| |||||  |||||||| ||    
T  47406206 ataaattgctttgtgtctttcttctctctctgt--tttatccgctgcatctagttctgaacatcacttcacaagtagcactctatctccttctgatcagt 47406303  T
Q  100 gtttt 104  Q
    |||||    
T  47406304 gtttt 47406308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 6090092 - 6089994
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgcttt-atccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||  ||||||||| ||| ||||||||||| ||| | | ||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  6090092 ttgtgtctttcttctttctctctctgtttttatccgctgcaagttagtcccgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 6089994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 14954755 - 14954676
Alignment:
Q  25 ctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||| |||||||| ||||| || |||| |||||  |||||||||||||||| |||||| |||||||| |||||||    
T  14954755 ctctctctgttttatccgttgcaactagttcttaacattacttcagaagtagaactctatctgcttctgatcagtgtttt 14954676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 20628271 - 20628345
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||  |||||||| ||||  || ||||||||||| |||||||||||||||| |||||| ||||||||    
T  20628271 tctctctctctattttatccgttgcatctagttctgaacatcacttcagaagtagaactctatctgcttctgatc 20628345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 38178454 - 38178536
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || | ||||||||| ||||||||| |||||| |||||| |||||||  |||||||    
T  38178454 tctctctctctgttttatccgctgcatatagtcctgaacatcacttcagaagaagaactctatctgcttctgattagtgtttt 38178536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 47207003 - 47206929
Alignment:
Q  30 tctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||| |||||||||||||  || |||| |||||| |||||||||||||||| |||||| |||||||| |||||||    
T  47207003 tctgttttatccgctgcatctagttctaaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 47206929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 22463846 - 22463907
Alignment:
Q  26 tctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctg 87  Q
    |||||||| |||||||||||||  || |||||||||||||||||||||||||| | ||||||    
T  22463846 tctctctgttttatccgctgcatctagttctgaacatctcttcagaagtagaattctatctg 22463907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 22465304 - 22465365
Alignment:
Q  26 tctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctg 87  Q
    |||||||| |||||||||||||  || |||||||||||||||||||||||||| | ||||||    
T  22465304 tctctctgttttatccgctgcatctagttctgaacatctcttcagaagtagaattctatctg 22465365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 9700861 - 9700913
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctg 87  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| | ||||||    
T  9700861 tttatccgctgcatttagttctgaacatctcttcagaagtagaattctatctg 9700913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 12727029 - 12727127
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgcttt-atccgctgcaattaattct-gaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||  ||||||||| ||| |||||||||||   ||||| ||||||| |||||||||||||| | |||||| |||||||| |||||||    
T  12727029 ttgtgtctttcttctttctctctctgtttttatccgctgcaagatattcttgaacatcacttcagaagtagaattctatctgcttctgatcagtgtttt 12727127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 14393804 - 14393886
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||||||| |||| ||| | ||||||||| |||||||||||||||| ||| |  |||||||| |||||||    
T  14393804 tctctctctctattttatccgatgcatttagtcctgaacatcacttcagaagtagaactctattttcttctgatcagtgtttt 14393886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 31302684 - 31302615
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||  || |||||||| || ||| |||||||||||| |||||| |||||||| |||||||    
T  31302684 tttatccgctgcatatagttctgaacgtcactttagaagtagaactctatctgcttctgatcagtgtttt 31302615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 1728840 - 1728891
Alignment:
Q  36 ttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctg 87  Q
    |||||||||||| ||| ||||||| |||||||||||||||||| | ||||||    
T  1728840 ttatccgctgcatttagttctgaaaatctcttcagaagtagaattctatctg 1728891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 5212953 - 5212922
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  5212953 ataaattgcttgtgtctttcttctctctctct 5212922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 8874933 - 8875016
Alignment:
Q  22 tctctctctctgctttatccgctg-caattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||| ||| || ||| | ||||||||| ||||||||| | |||||||| || |||||||| |||||||    
T  8874933 tctctctctctgttttatccactgccatttagtcctgaacatcacttcagaagcaaaactttatttgcttctgatcagtgtttt 8875016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 16031852 - 16031777
Alignment:
Q  22 tctctctctctgctttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||| ||||||| ||||||||| || ||||||||  |||||||||| ||||| ||| || ||||||||    
T  16031852 tctctctctctgttttatccactgcaattagatcctgaacattacttcagaagtggaactctatttgcttctgatc 16031777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 17239738 - 17239796
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaact 80  Q
    |||||||||||| ||||||||||||| ||| | ||||||||| ||||| ||| ||||||    
T  17239738 tctctctctctgttttatccgctgcatttagtcctgaacatcacttcaaaagcagaact 17239796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 19889748 - 19889830
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||| ||||||| ||| | ||| ||||| ||||||||| |||||| ||| || |||| ||| |||||||    
T  19889748 tctctctctctgttttattcgctgcatttagtcctggacatcacttcagaagcagaactctatttgcttctaatcagtgtttt 19889830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 33582567 - 33582485
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||||||||||||| || || |||||||| |||||||| ||||| | |||||  |||| ||| |||||||    
T  33582567 tctctctctctcttttatccgctgcaactagttatgaacatcacttcagaattagaaatctatctacttcttatcagtgtttt 33582485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 52919760 - 52919690
Alignment:
Q  35 tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||| ||| ||||||||||| ||||| || ||||||| |||||| || ||||| |||||||    
T  52919760 tttatccgctgcaagttagttctgaacatcacttcaaaaatagaactctatctgcttgtgatcagtgtttt 52919690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 18122490 - 18122539
Alignment:
Q  55 ctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||| |||||||||||||||| |||||| | |||||| |||||||    
T  18122490 ctgaacatcacttcagaagtagaactctatctgctcctgatcagtgtttt 18122539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 20645504 - 20645451
Alignment:
Q  21 ttctctctctctgctttatccgctgc-aattaattctgaacatctcttcagaag 73  Q
    ||||||||||||| |||||||||||| | ||| ||||||||||| |||||||||    
T  20645504 ttctctctctctgttttatccgctgctatttagttctgaacatcacttcagaag 20645451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 28581429 - 28581380
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcaga 71  Q
    |||||||||||| |||||||||||||  || ||||||||||| |||||||    
T  28581429 tctctctctctgttttatccgctgcatctagttctgaacatcacttcaga 28581380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 49554352 - 49554393
Alignment:
Q  55 ctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||| |||||||||||||||| |||||| ||||||||    
T  49554352 ctgaacatcacttcagaagtagaactctatctgcttctgatc 49554393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12175125 - 12175228
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtg 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||| |||||||| |||||||| |||    
T  12175125 ataaattgtttgtgtctttcttctctctctctgttttatccgctgcaactagttctgaacatcacttcaaaagtagaaatttatctgcttctgatcagtg 12175224  T
Q  101 tttt 104  Q
    ||||    
T  12175225 tttt 12175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 15705306 - 15705398
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||||||||| |||||||||    
T  15705306 tctctctctatgttttatccgctgcaattaatactgaacatctcttcagaagtagaactctatttgcttctgatctgtgttttcagttaggag 15705398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33421122 - 33421008
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||||||||||||||||||| ||||| ||| |||| || |||||| |||||||||||| |||| ||||| |||| |||| | |||||||||||    
T  33421122 ataaattgcttgtgtctttcttctctcgctctgtttttatccactacaattagttctgaacatctattcaaaagtataactctatccgcttctgatctgt 33421023  T
Q  100 gtttttagttaggag 114  Q
    ||||| |||||||||    
T  33421022 gttttcagttaggag 33421008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8182330 - 8182210
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgc-------tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctg 93  Q
    ||||||||||||||||||||||||||||||||         |||||| |||||||||| |||||||||||||||||||| ||||||| |||||| |||||    
T  8182330 ataaattgcttgtgtctttcttctctctctctctctctgtttttatctgctgcaattagttctgaacatctcttcagaaatagaactctatctgcttctg 8182231  T
Q  94 atctgtgtttttagttaggag 114  Q
    |||||  |||| |||||||||    
T  8182230 atctgcattttcagttaggag 8182210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 4832121 - 4832216
Alignment:
Q  10 ttgtgtctttcttc--tctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtt 102  Q
    ||||||||||||||  |||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||| |||||    
T  4832121 ttgtgtctttcttccttctctctctgtttttatccgctgcaattagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtt 4832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 27871088 - 27870971
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||||||||    ||||| ||||||||||||| |||  | ||||||||||||||||||||||| | |||||| |||||| |    
T  27871088 ataaattgcttgtgtctttcttctctctttctctctgttttatccgctgcatttaggtatgaacatctcttcagaagtagaattctatctgcttctgaac 27870989  T
Q  97 tgtgtttttagttaggag 114  Q
    ||  | ||||||||||||    
T  27870988 tgcatctttagttaggag 27870971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 9710646 - 9710729
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    |||||||||||| |||||||||||||  || ||||||||||| |||||||||||||||| |||||| |||||||| ||||||||    
T  9710646 tctctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttt 9710729  T

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Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 16546150 - 16546231
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||| || |||| |||||| ||||||||||||||||||||||| |||||||| |||||||    
T  16546150 tctctctctctg-tttatccgctgcaactagttctaaacatcacttcagaagtagaactttatctgcttctgatcagtgtttt 16546231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 16619512 - 16619431
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||| || |||| |||||| ||||||||||||||||||||||| |||||||| |||||||    
T  16619512 tctctctctctg-tttatccgctgcaactagttctaaacatcacttcagaagtagaactttatctgcttctgatcagtgtttt 16619431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 15574417 - 15574512
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaa---ttctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| |||||||||||||||||    |||||||||||||||||| ||||||||| |||||| ||||||||||| |||| | |||||||    
T  15574417 tctctctctctgttttatccgctgcaattataagttctgaacatctcttcagtagtagaactctatctgcttctgatctgtattttcaattaggag 15574512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 35954723 - 35954805
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||| || ||||||| ||| ||||||||||| |||| |||||| |||||||| |||||||    
T  35954723 tctctctctctgatttatccgctgcaactagttctgaatatcacttcagaagtaaaactctatctgcttctgatcagtgtttt 35954805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 41843220 - 41843316
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||| ||||||||  ||||||||| |||||  |||||||||| ||||||||||| |||||||||||||||| | |||| |||||||| |||||||    
T  41843220 ttgtgtttttcttctttctctctctgttttatttgctgcaattagttctgaacatcacttcagaagtagaactctttctgcttctgatcagtgtttt 41843316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 1292398 - 1292306
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||| |||||||||| | |||||| |||||| |||  |||| |||||||||    
T  1292398 tctctctctctgttttatccactgcaattagttctgaacttctcttaagaagtagaattctatctgcttctgaactgcattttcagttaggag 1292306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 4820839 - 4820743
Alignment:
Q  15 tctttcttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagtta 110  Q
    |||| |||||||||||||  ||| |||||||||||||| ||||||||||| ||||| |||||||||| |||||| |||||||  ||||||| |||||    
T  4820839 tcttccttctctctctctaattttatccgctgcaattagttctgaacatcacttcaaaagtagaactctatctgcttctgattagtgttttcagtta 4820743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 13473301 - 13473381
Alignment:
Q  24 tctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||| ||||||||||||| ||| |  |||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  13473301 tctctctctgttttatccgctgcatttagtcttgaacatcacttcagaagtagaactatatctgcttctgatcagtgtttt 13473381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 48063598 - 48063715
Alignment:
Q  1 ataaattgcttgtgtctttcttctc----tctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||| ||||||||||||||||| ||    |||||||| ||||||||||||| ||| || |||| |||||||||||||||||||| |||||| || ||| |    
T  48063598 ataatttgcttgtgtctttcttatcactttctctctgttttatccgctgcatttagttatgaatatctcttcagaagtagaactctatctgcttttgaac 48063697  T
Q  97 tgtgtttttagttaggag 114  Q
    ||  |||| |||||||||    
T  48063698 tgcattttcagttaggag 48063715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 13034664 - 13034747
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattc-tgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||| | | || |||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  13034664 tctctctctctgttttatccgctgcaacttagtcatgaacatcacttcagaagtagaactgtatctgcttctgatcagtgtttt 13034747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 15087912 - 15087825
Alignment:
Q  10 ttgtgtctttcttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||| |||||||||||||||| ||| ||||||||||  || | ||||||||| |||||||||||||||| |||||| ||||||||    
T  15087912 ttgtgtccttcttctctctctctgtttttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgcttctgatc 15087825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 21284170 - 21284268
Alignment:
Q  10 ttgtgtctttcttc--tctctctctg-ctttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||  ||||||||||  |||||||||||||| ||||| ||||||||| |||||||| ||||||| |||||| |||||||| |||||||    
T  21284170 ttgtgtctttcttctttctctctctgtttttatccgctgcaatttaatcctgaacatcacttcagaaatagaactctatctgcttctgatcagtgtttt 21284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28623146 - 28623244
Alignment:
Q  1 ataaattgctt-gtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||| ||||||||||||||||||| |   ||||||||| ||  || ||||||||||| |||||||||||||||| |||||| |||||||| ||    
T  28623146 ataaattgctttgtgtctttcttctctctctgt---ttatccgctacatctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagt 28623242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 12367569 - 12367651
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||||||||| ||| | ||||||||| ||||||||| |||||| ||| || |||||||| |||||||    
T  12367569 tctctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagaagaactctatttgcttctgatcagtgtttt 12367651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 16317408 - 16317490
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  ||||||||||||| ||| | ||||||||| ||||||||| |||||||||| || |||||||| |||||||    
T  16317408 tctctctctctattttatccgctgcatttagtcctgaacatcacttcagaagcagaactttatttgcttctgatcagtgtttt 16317490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 14424656 - 14424568
Alignment:
Q  21 ttctctctctctgcttt-atccgctgcaattaa-ttctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttag 107  Q
    ||||||||||||| ||| ||||||||||||| | ||| ||||||| ||||||||||||||||  ||||| |||||||| ||||||||||    
T  14424656 ttctctctctctgtttttatccgctgcaatttagttccgaacatcacttcagaagtagaactcgatctgcttctgatcagtgtttttag 14424568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 14424860 - 14424788
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||| |||||||||| || ||| ||||||||| || ||||||||||||||| |||||| ||||||    
T  14424860 tctctctctctgttttatccgctacatttagttctgaacaacttttcagaagtagaactctatctgcttctga 14424788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 2266374 - 2266457
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||| |||||||||| ||| || ||||||| |||||||||||||||||  ||||| ||||||| ||||||||    
T  2266374 tctctctctctgtttttatccgctgcatttagttatgaacatttcttcagaagtagaactcaatctgcttctgatttgtgtttt 2266457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 11792217 - 11792134
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattc-tgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||||||||| || | || |||||||| |||||||||||||||  |||||| |||||||| |||||||    
T  11792217 tctctctctctgttttatccgctgcattttagtcctgaacatcacttcagaagtagaacactatctgcttctgatcagtgtttt 11792134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 48237637 - 48237729
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  ||||||||||| |||||||| ||||  || |||||||| || |||||||||||||||| |||||  |||||||| |||||||    
T  48237637 ttgtgtctttc--ctctctctctgttttatccgatgcatctagttctgaacttcacttcagaagtagaactctatctacttctgatcagtgtttt 48237729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 4493878 - 4493808
Alignment:
Q  35 tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||| ||| || |||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  4493878 tttatccgctgcaagttagttatgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 4493808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 5001674 - 5001748
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||| ||||||||||||| ||| |  |||||||| ||||||||| |||||||||| || ||||||||    
T  5001674 tctctctctctgttttatccgctgcatttagtcttgaacatcacttcagaagcagaactttatttgcttctgatc 5001748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 21691754 - 21691688
Alignment:
Q  39 tccgctgcaat-taattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||| || | ||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  21691754 tccgctgcaatctagtcctgaacatcacttcagaagtagaactttatctgcttctgatcagtgtttt 21691688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19340035 - 19340117
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctt-tatccgctgcaattaattctgaacatctcttcagaagtagaa 78  Q
    ||||||||| ||||||||||||||||||    ||||| |  ||||||||||| ||| ||||||||||||||||||||||||||    
T  19340035 ataaattgcctgtgtctttcttctctctttctctctgttcgtatccgctgcatttagttctgaacatctcttcagaagtagaa 19340117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 32265553 - 32265610
Alignment:
Q  53 ttctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagtta 110  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||  ||||||||||    
T  32265553 ttctgaacatctcttcagaagtagaactctatctgcttctgaactgcatttttagtta 32265610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 48806666 - 48806764
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgct-ttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||| |||||||| |||||||||    ||||| | ||||||||||||  || |||||||||||| ||||||||||||||| |||||| ||||||    
T  48806666 ataaattgcctgtgtcttgcttctctctttctctctgttcttatccgctgcatctagttctgaacatctattcagaagtagaactctatctgcttctga 48806764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 2499376 - 2499292
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||| ||||||||||| ||||| |||||||||  ||||||||||||||| |||||| |||||||  |||||||    
T  2499376 tctctctctctgtttttatccgctgcaagttaatcctgaacatcatttcagaagtagaactctatctgcttctgattagtgtttt 2499292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 16911694 - 16911750
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaa 78  Q
    |||||||||||| || ||||||||||| || ||||||||||| ||||||||||||||    
T  16911694 tctctctctctgtttcatccgctgcaactagttctgaacatcacttcagaagtagaa 16911750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 2914467 - 2914550
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaa-ttctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||| ||| | ||||| | ||||||||||||| |||||| ||| || |||||||| |||||||    
T  2914467 tctctctctctgttttatccgctgctatttagttctggaaatctcttcagaagcagaactctatttgcttctgatcagtgtttt 2914550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 19328822 - 19328904
Alignment:
Q  21 ttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||  |||||||||||||  || | ||||||||| |||||||||||||||| |||||| || ||||| |||||||    
T  19328822 ttctctctctctt-tttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgcttgtgatcagtgtttt 19328904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 22580065 - 22580148
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||| ||| ||||||  || |||||||||||  |||||||||||||||||||||| || ||||| |||||||    
T  22580065 tctctctctctgtttttatcagctgcatctagttctgaacatcagttcagaagtagaactttatctgcttttgatcagtgtttt 22580148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 24795532 - 24795595
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg 98  Q
    ||||||||||||| ||| |||| ||||||| ||||||||||||| | |||||| ||||||||||    
T  24795532 tttatccgctgcatttagttctaaacatcttttcagaagtagaattctatctgcttctgatctg 24795595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 33692534 - 33692617
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    |||||||||||| ||||| |||||||  || ||||||||||| |||||||||| ||||| |||||  ||||||||  |||||||    
T  33692534 tctctctctctgttttattcgctgcatctagttctgaacatcacttcagaagtggaactctatctacttctgatcaatgttttt 33692617  T

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Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 13879457 - 13879407
Alignment:
Q  54 tctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  13879457 tctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 13879407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 14187020 - 14186950
Alignment:
Q  35 tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||| ||| | ||||||||| |||||||||||||| | |||||| |||||||| |||||||    
T  14187020 tttatccgctgcaagttactcctgaacatcacttcagaagtagaattctatctgcttctgatcagtgtttt 14186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 13138750 - 13138811
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||||  || | ||||||||| |||||||||||||||| |||||| ||||||||    
T  13138750 tttatccgctgcatctagtcctgaacatcacttcagaagtagaactctatctgcttctgatc 13138811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21382215 - 21382297
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgct-ttatccgctgcaattaattctgaacatctcttcagaagtagaa 78  Q
    |||||||| |||||||| ||||||||||    ||||| | |||| ||||||| ||| ||||||||||||||||||||||||||    
T  21382215 ataaattgattgtgtctctcttctctctttctctctgttcttattcgctgcatttagttctgaacatctcttcagaagtagaa 21382297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 13731486 - 13731570
Alignment:
Q  21 ttctctctctctgctttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||| ||||||| |||| | ||| ||||| | ||| ||||||||| |||||| ||| || ||||||||||||||||    
T  13731486 ttctctctctctgttttatccactgctacttagttctggaaatcacttcagaagcagaactctatttgcttctgatctgtgtttt 13731570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 16155554 - 16155634
Alignment:
Q  24 tctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||| |||||| ||||||| || |||| || ||| |||||||||||||| | |||||| |||||||  |||||||    
T  16155554 tctctctctgatttatctgctgcaactagttctaaatatcacttcagaagtagaattctatctgcttctgattagtgtttt 16155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 30025296 - 30025206
Alignment:
Q  10 ttgtgtctttcttctctctctctgc---tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||| |||||||     |||||||||||||| ||| | ||||||||| | ||| ||||||||||||||||| ||||||||    
T  30025296 ttgtgtctttcttctttctctctatgtttttatccgctgcaagttagtcctgaacatcacatcataagtagaactttatctgcttctgatc 30025206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 15574366 - 15574397
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  15574366 ataaattgcttgtgtctttcttctctctctct 15574397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 15705273 - 15705304
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  15705273 ataaattgcttgtgtctttcttctctctctct 15705304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 9069121 - 9069024
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgctttatccgctgc-aattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||  ||||||||| |||||||||||| | ||| || || | ||| ||||||||| | |||||||| || |||||||| |||||||    
T  9069121 ttgtgtctttcttctttctctctctgttttatccgctgctatttagttatggaaatcacttcagaagcaaaactttatttgcttctgatcagtgtttt 9069024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 16557423 - 16557504
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||||| ||||||| || |||| |||||   ||||||||||||||| |||||| |||||||| |||||||    
T  16557423 tctctctctcta-tttatctgctgcaactagttcttaacattaattcagaagtagaactctatctgcttctgatcagtgtttt 16557504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 16608239 - 16608158
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||||| ||||||| || |||| |||||   ||||||||||||||| |||||| |||||||| |||||||    
T  16608239 tctctctctcta-tttatctgctgcaactagttcttaacattaattcagaagtagaactctatctgcttctgatcagtgtttt 16608158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 23280800 - 23280870
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    |||||||||||||  || ||||||||||| ||| |||||| ||||  |||||| |||||||| ||||||||    
T  23280800 tttatccgctgcatctagttctgaacatcactttagaagtggaacactatctgcttctgatcagtgttttt 23280870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 331021 - 330973
Alignment:
Q  1 ataaattgcttgtgtctttcttc--tctctctctgctttatccgctgca 47  Q
    |||||||||||||||||||||||  | |||||||| |||||||||||||    
T  331021 ataaattgcttgtgtctttcttctttttctctctgttttatccgctgca 330973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 13259255 - 13259335
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtt 102  Q
    |||||||||||| ||||||||||||| ||| | | ||||||| ||| ||||| |||||| ||| |  |||||||| |||||    
T  13259255 tctctctctctgttttatccgctgcatttagtccggaacatcactttagaagcagaactctatttatttctgatcagtgtt 13259335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 19711827 - 19711895
Alignment:
Q  26 tctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||| |||||||||||||  || ||||| |||||| ||||||||| ||| | |||||| ||||||    
T  19711827 tctctctgttttatccgctgcatctagttctggacatctattcagaagtggaattctatctgcttctga 19711895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 16451 - 16568
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgc-----tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgat 95  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  16451 ataaattgcttgtgtctttcttctctctctctctctgtttttatccgctgcaattagttctgaacatctcttcagaagtagaattttatctgcttctgat 16550  T
Q  96 ctgtgtttttagttaggag 114  Q
    |||| |||| |||||||||    
T  16551 ctgt-ttttcagttaggag 16568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 3446 - 3538
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  3446 tctctctctctattttatccgctgcaattagttctgaacatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggag 3538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3403 - 3434
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  3403 ataaattgcttgtgtctttcttctctctctct 3434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 210776 - 210660
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct----gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||| |||||||||||||||||||||    | ||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||    
T  210776 ataaattgctggtgtctttcttctctctctctctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactctatctgcttctgatc 210678  T
Q  97 tgtgtttttagttaggag 114  Q
    ||| |||| |||||||||    
T  210677 tgtattttcagttaggag 210660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5502 - 5389
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct--gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg 98  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||| | ||||||||||||||| |||||||||| |||||| |||||||||     
T  5502 ataaattgcttgtgtctttcttctctctctctctgttttatccgctgcaattagt-ctgaacatctcttcaaaagtagaactctatctgcttctgatcta 5404  T
Q  99 tgtttttagttagga 113  Q
    | |||| ||||||||    
T  5403 tattttcagttagga 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 88336 - 88433
Alignment:
Q  1 ataaattgcttgtgtctttcttctc----tctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||||||||||||||||    |||||||| |||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||    
T  88336 ataaattgcttgtgtctttcttctccctttctctctgttttatccgctgcaactagttctgaacatctcttcagaagtagaactctatctgcttctga 88433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 35932772 - 35932869
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||||||    ||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||    
T  35932772 ataaattgcttgtgtctttcttctctctttctctctgttttatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgcttctga 35932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9088342 - 9088227
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct------gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||||||||||      | |||||| |||||||||||| |||||| ||||||||||||||||||| |||||| ||||||    
T  9088342 ataaattgcttgtgtctttcttctctctctctatctctgttttatctgctgcaattaat-ctgaacttctcttcagaagtagaactctatctgcttctga 9088244  T
Q  95 tctgtgtttttagttag 111  Q
    ||||| |||| ||||||    
T  9088243 tctgtattttcagttag 9088227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 28138937 - 28138852
Alignment:
Q  28 tctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  28138937 tctctgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaactctatctgtttctgatctgtattttcagttaggag 28138852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 30116664 - 30116757
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||||||||||| |||||| |||||| ||||||||||| |||| |||||||||    
T  30116664 tctctctctctgtttttatccgctgcaattagttctaaacatctcttcagaagcagaactctatctgcttctgatctgtattttcagttaggag 30116757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 3246267 - 3246331
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgt 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  3246267 tttatccgctgcaattagttctgaacatctcttcagaagtagaactctatctgcttctgatctgt 3246331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 15516300 - 15516221
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||| ||||| || |||||||||    
T  15516300 tttatccgctgcaattagttctgaatatctcttcagaagtagaactctatctgcttctgatatgtgtcttcagttaggag 15516221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 26764803 - 26764724
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||||    
T  26764803 tttatccgctgtaattttttctgaacatctcttcagaagtagaactctatctgcttctgatctatgttttcagttaggag 26764724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 23880358 - 23880276
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||||||||| ||| | ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  23880358 tctctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 23880276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 30742285 - 30742203
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||| ||||||| || ||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  30742285 tctctctctctgttttatctgctgcaactagttctgaacatcacttcagaagtagaactatatctgcttctgatcagtgtttt 30742203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10848144 - 10848025
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct------ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    |||||||||||||||||||| |||||||      ||||| ||||||||||||| ||| || ||||||||| ||||||||||||||| |||||| ||||||    
T  10848144 ataaattgcttgtgtctttcatctctctttctctctctgttttatccgctgcatttagttatgaacatcttttcagaagtagaactctatctgcttctga 10848045  T
Q  95 tctgtgtttttagttaggag 114  Q
     |||  |||| |||||||||    
T  10848044 actgcattttcagttaggag 10848025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 21075974 - 21076054
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtt 102  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||  ||||| |||||||| |||||    
T  21075974 tctctctctctgttttatccgctgcatttagttctgaacatcacttcagaagtagaactcaatctgcttctgatcagtgtt 21076054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31146369 - 31146466
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||| |||||||||||| |||||    ||||| ||||||||||||| ||| ||||||||||||||| |||||||||||| |||||| ||||||    
T  31146369 ataaattgcctgtgtctttcttatctctttctctctgttttatccgctgcatttagttctgaacatctctttagaagtagaactctatctgcttctga 31146466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 6498675 - 6498578
Alignment:
Q  10 ttgtgtctttcttct--ctctctctgctttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||  ||||||||| |||||||||||||| ||| | ||||||||| |||||||||||||||| |||||| |||| ||| |||||||    
T  6498675 ttgtgtctttcttctttctctctctgttttatccgctgcaacttagtcctgaacatcacttcagaagtagaactctatctgcttctaatcagtgtttt 6498578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33932640 - 33932531
Alignment:
Q  1 ataaattgcttgtgtctttcttctct------ctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||||      ||||||| |||||||||||||| || |||||||||||  ||||||||||||| | ||| || ||||||    
T  33932640 ataaattgcttgtgtctttcttctctatctctctctctgttttatccgctgcaactagttctgaacatcatttcagaagtagaaatctatttgcttctga 33932541  T
Q  95 tctgtgtttt 104  Q
    || |||||||    
T  33932540 tcagtgtttt 33932531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 35986998 - 35987087
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||| |||||||||||||||||||||| |    |||||||||||||  || |||||||||||| ||||||||||||||| |||||| ||||||    
T  35986998 ataaactgcttgtgtctttcttctctctgt----tttatccgctgcatctagttctgaacatctattcagaagtagaactctatctgcttctga 35987087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4886335 - 4886288
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgctttatccgctgcaa 48  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4886335 ataaattgcttgtgtctttcttctctctctctgttttatccgctgcaa 4886288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 11993221 - 11993142
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||| || ||||| ||||||||||| ||||||||| |||||| |||||| | |||||| |||||||||||||||||    
T  11993221 tttatccgttgaaattagttctgaacatcacttcagaagcagaactctatctgctcctgatcagtgtttttagttaggag 11993142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 29139214 - 29139277
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatct 86  Q
    |||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||| |||||    
T  29139214 tctctctctctgttttatccgctgcaatt-agtctgaacatctctttagaagtagaactctatct 29139277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 12353661 - 12353728
Alignment:
Q  29 ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||| ||||||||||||||||| |  |||||||| ||||| ||||||||||||||||| ||||||||    
T  12353661 ctctgttttatccgctgcaattagtcatgaacatcacttcataagtagaactttatctgcttctgatc 12353728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 37395537 - 37395431
Alignment:
Q  1 ataaattgct-tgtgtctttcttctctctct--ctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatct 97  Q
    |||||||||| ||||| |||||||||| |||  ||| |||||||||||||| || ||||||||||| |||||||| ||||| | |||||| |||| |||     
T  37395537 ataaattgctatgtgtttttcttctctttctttctgttttatccgctgcaactagttctgaacatcacttcagaaatagaattctatctgcttctaatca 37395438  T
Q  98 gtgtttt 104  Q
    |||||||    
T  37395437 gtgtttt 37395431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 7746484 - 7746569
Alignment:
Q  21 ttctctctctctgcttt-atccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||| ||| ||||||| ||| ||| | ||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  7746484 ttctctctctctgtttttatccgctacaagttagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 7746569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 31117223 - 31117139
Alignment:
Q  22 tctctctctctgcttt-atccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||| |||| |||||| ||| |||| |||||| |||||||||||||||| ||||||||| ||||| |||||||    
T  31117223 tctctctctctgtttttatccactgcaagttagttctaaacatcacttcagaagtagaactctatctggttttgatcagtgtttt 31117139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 19546321 - 19546400
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgt 101  Q
    |||||||||||| ||||||||||||| ||| | ||||||||| ||||||||| | |||| ||| || |||||||| ||||    
T  19546321 tctctctctctgttttatccgctgcatttagtcctgaacatcacttcagaagcataactatatttgcttctgatcagtgt 19546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 42242942 - 42242871
Alignment:
Q  33 gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||| ||||||| |||||||||||||| ||||| |||||||| | ||| || |||||||| |||||||    
T  42242942 gctttatctgctgcaactaattctgaacatcacttcataagtagaaatctatttgcttctgatcagtgtttt 42242871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 13736910 - 13736984
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagtt 109  Q
    |||||||||||||  || || |||||||| |||||||||| ||||| |||||| |||||||| ||||||| ||||    
T  13736910 tttatccgctgcatctagttatgaacatcacttcagaagtggaactctatctgtttctgatcagtgttttcagtt 13736984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 21100553 - 21100623
Alignment:
Q  35 tttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||||| || ||||||||| ||||| |||| ||||| |||||| |||||||| |||||||    
T  21100553 tttatccgctgcaattagatcctgaacatcacttcaaaagtggaactctatctgcttctgatcagtgtttt 21100623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 31487554 - 31487472
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || | ||||||||| ||||| || ||||||| ||| || |||||||| |||||||    
T  31487554 tctctctctctgttttatccgctgcatctagtcctgaacatcacttcaaaattagaactctatttgcttctgatcagtgtttt 31487472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 33022005 - 33021923
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||  |||||||  ||||  || ||||||||||| |||| ||||||||||| |||||| |||||||| |||||||    
T  33022005 tctctctctctattttatccattgcatctagttctgaacatcacttcggaagtagaactctatctgcttctgatcagtgtttt 33021923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 22000811 - 22000900
Alignment:
Q  15 tctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||| ||||||||||| || |||||| |||||||||| | |||||||||  |||||||| | |||| ||| || |||||||| |||||||    
T  22000811 tcttccttctctctctttgttttatctgctgcaattagtcctgaacatcatttcagaagcataactctatttgcttctgatcagtgtttt 22000900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 643475 - 643570
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgca-attaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||||||||| | |||||||| ||||  ||| | || |||||| ||||| ||||||||||| ||||  |||| ||| |||||||    
T  643475 ttgtgtctttcttctctctctccgttttatccgttgcattttagtcctaaacatcacttcaaaagtagaacttcatctatttctaatcagtgtttt 643570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3246206 - 3246237
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  3246206 ataaattgcttgtgtctttcttctctctctct 3246237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29139169 - 29139200
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  29139169 ataaattgcttgtgtctttcttctctctctct 29139200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 30742354 - 30742323
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  30742354 ataaattgcttgtgtctttcttctctctctct 30742323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 6513206 - 6513303
Alignment:
Q  10 ttgtgtctttcttc--tctctctctgctttatccgctgc-aattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||  |||||||||| |||||||||||| | ||| ||||| | ||| ||||||||| |||||| ||| || || ||||| |||||||    
T  6513206 ttgtgtctttcttctttctctctctgttttatccgctgctacttagttctggaaatcacttcagaagcagaactctatttgcttatgatcagtgtttt 6513303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 13546330 - 13546392
Alignment:
Q  35 tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||| || ||| || |||||||| |||||||||||||||| |||||| ||||||||    
T  13546330 tttatccgctgtaagttagttatgaacatcacttcagaagtagaactctatctgcttctgatc 13546392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 9399391 - 9399486
Alignment:
Q  10 ttgtgtctttcttctctctctct--gctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||| |||||| |||||||  | ||||||||||||||||| | ||| ||||| |||||||| ||||| | |||||| |||||||  |||||||    
T  9399391 ttgtgtctctcttctttctctctttgttttatccgctgcaattagtcctg-acatcacttcagaaatagaattctatctgcttctgattagtgtttt 9399486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23407411 - 23407501
Alignment:
Q  1 ataaattgcttgtgtctttcttctctc----tctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctg 87  Q
    ||||||| | |||||||||||||||||    |||||| ||||||| |||||  || |||||||||||| ||||||||| ||| | ||||||    
T  23407411 ataaattacctgtgtctttcttctctccttctctctgttttatccactgcatctagttctgaacatctattcagaagtggaattctatctg 23407501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 28465139 - 28465230
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    |||||||||||   |||||||||||||||| | ||||| ||| |||||||||||||||| ||| |  || ||||||||  ||| |||||||||    
T  28465139 tctctctctctctcttatccgctgcaattagt-ctgaatatcacttcagaagtagaactctatatttttttgatctgtactttcagttaggag 28465230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 110333 - 110447
Alignment:
Q  1 ataaattgcttgtgtctt-tct-tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctg 98  Q
    |||||||||| ||||||| ||| |||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||| |||||| ||||||||||    
T  110333 ataaattgctagtgtcttctctctctctctctctgttttatccactgcaattagtt-tgaacatctcttcagaagtagaactctatctgcttctgatctg 110431  T
Q  99 tgtttttagttaggag 114  Q
    | |||| |||||||||    
T  110432 tattttcagttaggag 110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 20214 - 20313
Alignment:
Q  10 ttgtgtctttcttctctct--ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttag 107  Q
    |||| ||||||||||||||  ||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||||| ||| |  |||||||| || |||||||    
T  20214 ttgtatctttcttctctctttctctgttttatccgctgcatttagttctgaatatcacttcagaagcagaactctatttacttctgatcagtttttttag 20313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11572 - 11454
Alignment:
Q  1 ataaattgcttgtgtctttcttctctc----tctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    |||||||||||||||||||||||||||    ||| || ||||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||||| |    
T  11572 ataaattgcttgtgtctttcttctctccttctctatgttttatccgctgcatttagttctgaacatctcttcagaagtggaactttatctgcttctgaac 11473  T
Q  97 tg-tgtttttagttaggag 114  Q
    || | |||| |||||||||    
T  11472 tgcttttttcagttaggag 11454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35481 - 35599
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||||||||    ||||| | ||||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||| |    
T  35481 ataaattgcttgtgtctttcttctctctttctctctgttctatccgctgcatttagttctgaacatctcttcagaagtagaactctatctgcttctgaac 35580  T
Q  97 tgtgttttt-agttaggag 114  Q
    ||  ||||| |||||||||    
T  35581 tgcatttttcagttaggag 35599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26387 - 26505
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatc 96  Q
    ||||||||||||||||||||||||||||    ||||  | ||| ||||||| ||| || |||||||||||||||||||| |||| |||||| |||||| |    
T  26387 ataaattgcttgtgtctttcttctctctttctctctattctatacgctgcatttagttttgaacatctcttcagaagtataactctatctgtttctgaac 26486  T
Q  97 tgtgttttt-agttaggag 114  Q
    ||  ||||| |||||||||    
T  26487 tgcatttttcagttaggag 26505  T

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Target: scaffold0352 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1555 - 1652
Alignment:
Q  1 ataaattgcttgtgtctttcttctctct----ctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||||||||||||||||    ||||| ||||||| || || ||| |||||||||||||||||||||||||||| |||||| ||||||    
T  1555 ataaattgcttgtgtctttcttctctctttctctctgttttatccactacatttagttctgaacatctcttcagaagtagaactctatctgcttctga 1652  T

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Target: scaffold0011 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 145185 - 145286
Alignment:
Q  1 ataaattgcttgtgtctttcttctctc----tctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgat 95  Q
    |||||||||||||||||||||||||||    |||||| ||| ||||| |||||||| |||||| ||||||||||||||||||||| |||||| |||||||    
T  145185 ataaattgcttgtgtctttcttctctcactctctctgtttttatccgttgcaattagttctgatcatctcttcagaagtagaactctatctgcttctgat 145284  T
Q  96 ct 97  Q
    ||    
T  145285 ct 145286  T

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Target: scaffold0011; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 66140 - 66260
Alignment:
Q  1 ataaattgcttgtgtctttcttctctctctctgc-------tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctg 93  Q
    ||||||| ||||||||||||||||||||||||         ||||||||||||||||| || ||| |||||||| |||||||||||| |||||| |||||    
T  66140 ataaatttcttgtgtctttcttctctctctctctctctgtttttatccgctgcaattagttatgatcatctctttagaagtagaactctatctgcttctg 66239  T
Q  94 atctgtgtttttagttaggag 114  Q
    |||||  |||| |||||||||    
T  66240 atctgcattttcagttaggag 66260  T

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Target: scaffold0217 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 22932 - 23011
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| |||||| || |||||||| |||| |||||||||    
T  22932 tttatccgctgcaattagttttgaacatctcttcagaagtagaactctatctgcttttgatctgtattttcagttaggag 23011  T

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Target: scaffold0217; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 18384 - 18301
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    ||||||||| || ||||||||||||| ||| ||||||||||| |||||||||| |||| ||||||| |  ||||| ||||||||    
T  18384 tctctctctttgttttatccgctgcatttagttctgaacatcacttcagaagtggaacattatctgctcttgatcagtgttttt 18301  T

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Target: scaffold0275 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 23973 - 23882
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    ||||| ||| || ||||||||||||||||| | |||||||||||||||||||||||| | |||||| ||||||||||| |||| |||||||||    
T  23973 tctctatctttgttttatccgctgcaattagt-ctgaacatctcttcagaagtagaattctatctgcttctgatctgtattttcagttaggag 23882  T

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Target: scaffold0028 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 24531 - 24631
Alignment:
Q  15 tctttcttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttagga 113  Q
    |||| ||||||| |||||| ||| |||||||||||||| ||||||||||| ||||||||||||| || |||||| |||||||  ||||||| ||||||||    
T  24531 tcttccttctctatctctgtttttatccgctgcaattagttctgaacatcacttcagaagtagagctctatctgcttctgattagtgttttcagttagga 24630  T
Q  114 g 114  Q
    |    
T  24631 g 24631  T

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Target: scaffold0439 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 7486 - 7564
Alignment:
Q  36 ttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagttaggag 114  Q
    ||||||| |||||||| || |||||||| |||||||||||||||| |||||| |||||||| ||||||| |||||||||    
T  7486 ttatccgttgcaattagttttgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggag 7564  T

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Target: scaffold0043 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 79137 - 79210
Alignment:
Q  37 tatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttttagtta 110  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||| |||| ||| ||||||| |||||    
T  79137 tatccgctgcaattagttctgaacatcacttcagaagtagaactctatctgcttctaatcagtgttttcagtta 79210  T

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Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 715 - 797
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| |||||||||||||  || ||||||||||| |||||||||||||| |  ||||| |||||||| |||||||    
T  715 tctctctctctgttttatccgctgcatctagttctgaacatcacttcagaagtagaattccatctgcttctgatcagtgtttt 797  T

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Target: scaffold0115 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 17679 - 17597
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||| ||||||||||| || || ||||||||||| |||||||||||||| | ||| || |||||||| |||||||    
T  17679 tctctctctctgttttatccgctggaactagttctgaacatcacttcagaagtagaaatctatttgcttctgatcagtgtttt 17597  T

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Target: scaffold0315 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 8025 - 7935
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||| |    | |||||||||| ||||| |||||| |||||||| |||||||    
T  8025 ttgtgtctttcttctctctctctgttttatccgctgcaattagatctta----cacttcagaagtggaactctatctgcttctgatcagtgtttt 7935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6004 - 6102
Alignment:
Q  1 ataaattgcttgtgtctttcttctct----ctctctgct-ttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||||| ||||||||||    ||||||| | ||||||| |||| ||| |||||||||||||||||||||||||| | |||||| ||||||    
T  6004 ataaattgcttgtgtatttcttctctttttctctctgttcttatccgttgcatttagttctgaacatctcttcagaagtagaattctatctgcttctga 6102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 2317 - 2238
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgt 101  Q
    |||||||||||| |||||||||| ||  || ||| ||||||| |||||||||||||||| |||||| |||||||| ||||    
T  2317 tctctctctctgttttatccgctacatctagttcagaacatcacttcagaagtagaactctatctgcttctgatcagtgt 2238  T

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Target: scaffold0251 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 7190 - 7095
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    ||||||||| |||||||||||||| |||||||| ||||  || ||||  ||||| |||||||||| ||||  |||||| |||||||| ||||||||    
T  7190 ttgtgtcttccttctctctctctgttttatccggtgcatctagttctcgacatcacttcagaagtggaacactatctgcttctgatcagtgttttt 7095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 102904 - 102821
Alignment:
Q  22 tctctctctctgctttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||| |||||||| |||||| ||| | ||||||||| |||||||||||||||| |||||| || ||||| |||||||    
T  102904 tctctctctcttctttatccactgcaagttagtcctgaacatcacttcagaagtagaactctatctgcttatgatcagtgtttt 102821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 63674 - 63605
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||||| ||||||||| | |||| |||||||||||||||||  |||||| | |||||||    
T  63674 tttatccgctgcaattagttctgaacaacacttctgaagtagaactttatctacttctgaacagtgtttt 63605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 46040 - 45944
Alignment:
Q  1 ataaattgctt-gtgt-ctttcttctctctctctgcttt-atccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||| |||| ||| ||||| |||||||| ||| || ||||||||||| ||||||||| | |||| |||||||||||||||||| ||||||    
T  46040 ataaattgctttgtgtgcttccttctttctctctgtttttatacgctgcaattagttctgaacaacacttctgaagtagaactttatctgcttctga 45944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 211722 - 211625
Alignment:
Q  10 ttgtgtctttcttctctctctctg-ctttatccgctgcaa-ttaattctgaacatctcttcag-aagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||| | ||||||||| |||||| |||||||| | |||||| |||||||| |||||||    
T  211722 ttgtgtctttcttctttctctctgtttttatccgctgcaagttattcctgaacatcacttcagaaagtagaattatatctgcttctgatcagtgtttt 211625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 83709 - 83626
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgttttt 105  Q
    |||||||||||| ||||||| |||||  || |||| |||||  |||||||||| ||||| |||||| |||||||| ||||||||    
T  83709 tctctctctctgttttatccactgcatctagttctaaacataacttcagaagtggaactctatctgcttctgatcagtgttttt 83626  T

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Target: scaffold0290 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 19417 - 19499
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||| |||  |||||||||||||  || ||||||||||| | |||||||||||||| |||||| |||||||  |||||||    
T  19417 tctctctatctattttatccgctgcatctagttctgaacatcacgtcagaagtagaactctatctgcttctgattagtgtttt 19499  T

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Target: scaffold0210 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 957 - 887
Alignment:
Q  35 tttatccgctgcaattaattc-tgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||| | |||| |||||||| |||||||||||||| | |||||| |||||||| |||||||    
T  957 tttatccgctgcaagttattcctgaacatcacttcagaagtagaattctatctgcttctgatcagtgtttt 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 25764 - 25694
Alignment:
Q  35 tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||| ||| | ||||||||| |||||||||||||||| ||| || |||||||| |||||||    
T  25764 tttatccgctgcaagttagtcctgaacatcacttcagaagtagaactctatttgcttctgatcagtgtttt 25694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 21710 - 21780
Alignment:
Q  35 tttatccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    |||||||||||||| ||| | ||||||||||||| |||||||||||||||| || || ||||| |||||||    
T  21710 tttatccgctgcaagttagtcctgaacatctctttagaagtagaactttatttgcttatgatcagtgtttt 21780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 2742 - 2814
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||| | || ||||||||||||| ||| ||||||||| || |||||||||| |||| |||||| ||||||    
T  2742 tctctctatatgttttatccgctgcatttagttctgaacagcttttcagaagtataactctatctgcttctga 2814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 5521 - 5456
Alignment:
Q  22 tctctctctctgctttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatct 86  Q
    |||||||||||| ||||||||||||||||| | |||||||||| |||||||||  ||||| |||||    
T  5521 tctctctctctgttttatccgctgcaattagaatctgaacatcacttcagaagctgaactctatct 5456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 4 - 54
Alignment:
Q  57 gaacatctcttcagaagtagaactttatctggttctgatctgtgtttttag 107  Q
    ||||||| ||||||||||||||||  ||||| |||||||| ||||||||||    
T  4 gaacatcacttcagaagtagaactcgatctgcttctgatcagtgtttttag 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 9302 - 9232
Alignment:
Q  35 tttatccgctgcaattaattct-gaacatctcttcagaagtagaactttatctggttctgatctgtgtttt 104  Q
    ||||||||||||||   ||||| ||||||| |||||||||||||| | |||||| |||||||| |||||||    
T  9302 tttatccgctgcaagacattcttgaacatcacttcagaagtagaattctatctgcttctgatcagtgtttt 9232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 14462 - 14404
Alignment:
Q  22 tctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaact 80  Q
    |||||||||||| ||||||||||||| ||| | ||||||||| ||||| ||| ||||||    
T  14462 tctctctctctgttttatccgctgcatttagtcctgaacatcacttcaaaagcagaact 14404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 2561 - 2621
Alignment:
Q  35 tttatccgctgcaatta-attctgaacatctcttcagaagtagaactttatctggttctga 94  Q
    ||||||||||||| ||| |||||||||||| |||||||||  ||||| |||||| ||||||    
T  2561 tttatccgctgcatttagattctgaacatcacttcagaagctgaactctatctgcttctga 2621  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 7230 - 7170
Alignment:
Q  35 tttatccgctgcaattaattctgaacatctcttcagaagtagaactttatctggttctgat 95  Q
    ||||||||||||| ||| || |||||||| ||||| |||||||||| ||| || |||||||    
T  7230 tttatccgctgcatttagttgtgaacatcacttcaaaagtagaactctatttgcttctgat 7170  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 10867 - 10935
Alignment:
Q  21 ttctctctctctgctttat-ccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctg 87  Q
    ||||||||||||| ||| | ||||||||| ||| | ||||||||| |||||||||||||||| ||||||    
T  10867 ttctctctctctgtttttttccgctgcaagttagtcctgaacatcacttcagaagtagaactctatctg 10935  T

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Target: scaffold0161; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 15531 - 15599
Alignment:
Q  21 ttctctctctctgctttat-ccgctgcaa-ttaattctgaacatctcttcagaagtagaactttatctg 87  Q
    ||||||||||||| ||| | ||||||||| ||| | ||||||||| |||||||||||||||| ||||||    
T  15531 ttctctctctctgtttttttccgctgcaagttagtcctgaacatcacttcagaagtagaactctatctg 15599  T

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Target: scaffold0120 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 37490 - 37557
Alignment:
Q  10 ttgtgtctttcttctctctctctgctttatccgctgcaattaattctgaacatctcttcagaagtagaact 80  Q
    ||||||||||||||||||||| |   |||||||||||||||| | |||||||||  |||| ||| ||||||    
T  37490 ttgtgtctttcttctctctctgt---ttatccgctgcaattagtcctgaacatcaattcaaaagaagaact 37557  T

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