View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2329_high_51 (Length: 235)
Name: NF2329_high_51
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2329_high_51 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 33884916 - 33884700
Alignment:
| Q |
16 |
ggttatataatagaaagtactacatcaaattaaagagacaaagacatataagtgtttaaggaagaagaagaagtgatgttggaatggagaggaaacaagt |
115 |
Q |
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| T |
33884916 |
ggttatataatagaaagtactacatcaaattaaagagacaaagacatataagtgtttaaggaagaagaag---tgatgttggaatggagaggaaacaagt |
33884820 |
T |
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| Q |
116 |
ggagatgcgtttaggattaagagaataatatgaattggtgattgagattgagacacgtaggtagtaggacattcacggtcatgaatattgtcttttcttg |
215 |
Q |
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| T |
33884819 |
ggagatgcgtttaggattaagagaataatatgaattggtgattgagattgagacacgtaggtagtaggacattcacggtcatgaatattgtcttttcttg |
33884720 |
T |
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| Q |
216 |
agacactgagaaatattagc |
235 |
Q |
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| T |
33884719 |
agacactgagaaatattagc |
33884700 |
T |
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