View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2329_low_16 (Length: 403)
Name: NF2329_low_16
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2329_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 28530270 - 28530644
Alignment:
| Q |
11 |
catcaccaagaggtgtatttgaggtacctatttcagattccgacagcacggggagcagcaactacagcaatggaggtaaaccatcatcaccaggaggagg |
110 |
Q |
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| T |
28530270 |
catcaccaagaggtgtatttgaggtacctatttcggattccgacagcacggggagcagcaactacagcaatggaggtaaaccatcatcaccaggaggagg |
28530369 |
T |
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| Q |
111 |
agatggagggcaccaatggaaggctatgattgatgcattgaggtttaagtctgtgaggagattttctaccattcctttgcttgctgctagttatgaaatt |
210 |
Q |
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| T |
28530370 |
agatggagggcaccaatggaaggctatgattgatgcattgaggtttaagtctgtgaggagattttctagcattcctttgcttgctgctagttatgaaatt |
28530469 |
T |
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| Q |
211 |
tctaggaagaatttgaggaacaagttggctcgtaaaagaacagctaacgatgaagatgagaatatttttgatgctgcttttgatcttgatggtattacaa |
310 |
Q |
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| T |
28530470 |
tctaggaagaatttgaggaacaagttggctcgtaaaagaacagctaacgatgaagatgagaatatttttgatgctgcttttgatcttgatggtattacaa |
28530569 |
T |
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| Q |
311 |
agccttcttggagaaactttagttatgaagatcttgttgctgcaaccgacaatttcaatcctggtaaggaattag |
385 |
Q |
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| T |
28530570 |
agccttcttggagaaactttagttatgaagatcttgttgctgcaaccgacaatttcaatcctggtaaggaattag |
28530644 |
T |
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