View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2329_low_33 (Length: 322)

Name: NF2329_low_33
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2329_low_33
NF2329_low_33
[»] chr7 (48 HSPs)
chr7 (20-310)||(29653628-29653918)
chr7 (30-209)||(28628025-28628201)
chr7 (30-111)||(38135305-38135386)
chr7 (30-87)||(45601609-45601666)
chr7 (24-108)||(30144887-30144971)
chr7 (164-310)||(36514430-36514569)
chr7 (30-98)||(40830324-40830392)
chr7 (20-87)||(12966149-12966216)
chr7 (20-79)||(22174141-22174200)
chr7 (20-91)||(24549770-24549841)
chr7 (20-79)||(28858186-28858245)
chr7 (30-79)||(1569157-1569206)
chr7 (38-111)||(30814771-30814844)
chr7 (20-69)||(40139030-40139079)
chr7 (21-77)||(41461242-41461298)
chr7 (31-78)||(46973734-46973781)
chr7 (30-84)||(43281967-43282021)
chr7 (30-79)||(30664709-30664758)
chr7 (135-296)||(39811889-39812045)
chr7 (30-110)||(42177110-42177190)
chr7 (20-67)||(9191928-9191975)
chr7 (29-84)||(44401216-44401271)
chr7 (236-310)||(14593679-14593753)
chr7 (236-310)||(37617862-37617936)
chr7 (30-88)||(37976367-37976425)
chr7 (20-87)||(42103603-42103672)
chr7 (30-87)||(21517472-21517529)
chr7 (20-96)||(30200046-30200122)
chr7 (236-296)||(33072886-33072946)
chr7 (236-296)||(40008707-40008767)
chr7 (25-68)||(41483639-41483682)
chr7 (236-310)||(16013202-16013276)
chr7 (30-84)||(28562458-28562512)
chr7 (236-310)||(35906491-35906565)
chr7 (38-87)||(14593893-14593942)
chr7 (38-87)||(16013416-16013465)
chr7 (236-289)||(25826760-25826813)
chr7 (30-63)||(28542036-28542069)
chr7 (57-98)||(29229600-29229641)
chr7 (30-79)||(36239888-36239937)
chr7 (247-296)||(48736200-48736249)
chr7 (30-66)||(5336072-5336108)
chr7 (164-212)||(27021915-27021963)
chr7 (24-68)||(30914588-30914632)
chr7 (236-296)||(34869352-34869412)
chr7 (30-66)||(35922407-35922443)
chr7 (236-296)||(36651926-36651986)
chr7 (20-84)||(43282545-43282609)
[»] chr4 (89 HSPs)
chr4 (20-296)||(54470139-54470407)
chr4 (20-79)||(42639102-42639161)
chr4 (23-98)||(47147495-47147570)
chr4 (20-98)||(7681992-7682070)
chr4 (23-77)||(42293350-42293404)
chr4 (20-88)||(8599023-8599091)
chr4 (30-85)||(10209171-10209226)
chr4 (30-105)||(20999115-20999190)
chr4 (23-110)||(38903803-38903889)
chr4 (20-69)||(6843766-6843815)
chr4 (20-69)||(7544605-7544654)
chr4 (20-69)||(37042746-37042795)
chr4 (135-296)||(44360015-44360174)
chr4 (23-296)||(25967346-25967617)
chr4 (24-79)||(934517-934572)
chr4 (30-85)||(31961358-31961413)
chr4 (30-85)||(37488226-37488281)
chr4 (23-98)||(45569094-45569169)
chr4 (30-85)||(50680875-50680930)
chr4 (30-76)||(26024942-26024988)
chr4 (235-296)||(20105760-20105821)
chr4 (30-87)||(26356752-26356809)
chr4 (30-99)||(31043193-31043262)
chr4 (33-98)||(53517652-53517717)
chr4 (30-66)||(26025011-26025047)
chr4 (30-86)||(28351693-28351749)
chr4 (26-98)||(34233112-34233184)
chr4 (30-110)||(44667337-44667417)
chr4 (20-76)||(47372795-47372851)
chr4 (20-79)||(2557754-2557813)
chr4 (32-91)||(18966734-18966793)
chr4 (23-74)||(20047581-20047632)
chr4 (20-79)||(21214668-21214727)
chr4 (20-75)||(31403116-31403171)
chr4 (30-85)||(31897520-31897575)
chr4 (29-84)||(33225924-33225979)
chr4 (165-296)||(33709851-33709982)
chr4 (24-79)||(40018275-40018330)
chr4 (20-110)||(44719443-44719536)
chr4 (30-85)||(46372159-46372214)
chr4 (48-111)||(49987517-49987580)
chr4 (23-76)||(21879238-21879292)
chr4 (20-62)||(25574982-25575024)
chr4 (20-66)||(33710078-33710124)
chr4 (236-290)||(45185307-45185361)
chr4 (24-86)||(49738636-49738698)
chr4 (239-296)||(2588913-2588970)
chr4 (236-289)||(10208977-10209030)
chr4 (30-79)||(30853484-30853533)
chr4 (30-87)||(35690404-35690461)
chr4 (30-87)||(45204931-45204988)
chr4 (30-87)||(55809082-55809139)
chr4 (30-110)||(8459127-8459207)
chr4 (236-296)||(17900412-17900472)
chr4 (240-296)||(21106916-21106972)
chr4 (236-296)||(25257869-25257929)
chr4 (20-60)||(41192221-41192261)
chr4 (30-98)||(44686662-44686730)
chr4 (240-296)||(45423551-45423607)
chr4 (30-98)||(53540412-53540480)
chr4 (20-79)||(40654209-40654268)
chr4 (23-98)||(43069903-43069978)
chr4 (20-79)||(50662529-50662588)
chr4 (40-79)||(51252555-51252594)
chr4 (236-310)||(12494668-12494742)
chr4 (23-65)||(22420802-22420843)
chr4 (236-310)||(23906591-23906665)
chr4 (236-310)||(31960104-31960178)
chr4 (138-212)||(42285897-42285971)
chr4 (236-310)||(43433836-43433910)
chr4 (33-79)||(51421871-51421917)
chr4 (236-310)||(56375208-56375282)
chr4 (26-79)||(17666131-17666184)
chr4 (30-79)||(17900621-17900670)
chr4 (30-79)||(20105610-20105659)
chr4 (30-87)||(21107125-21107182)
chr4 (30-67)||(29182605-29182642)
chr4 (34-67)||(30621297-30621330)
chr4 (39-76)||(40268364-40268401)
chr4 (25-58)||(44047458-44047491)
chr4 (25-62)||(44384988-44385025)
chr4 (25-110)||(44641893-44641978)
chr4 (20-57)||(55028984-55029021)
chr4 (236-296)||(1777305-1777365)
chr4 (30-98)||(13805357-13805425)
chr4 (236-296)||(43070054-43070114)
chr4 (39-87)||(44860966-44861014)
chr4 (20-76)||(48033229-48033285)
chr4 (20-60)||(55388293-55388333)
[»] chr1 (68 HSPs)
chr1 (20-212)||(40416382-40416571)
chr1 (20-296)||(43423649-43423919)
chr1 (23-110)||(38868992-38869079)
chr1 (20-110)||(30834059-30834149)
chr1 (20-110)||(6025715-6025805)
chr1 (20-98)||(8342963-8343041)
chr1 (20-110)||(42501218-42501308)
chr1 (30-91)||(8203226-8203287)
chr1 (20-111)||(8796318-8796409)
chr1 (20-98)||(3818938-3819016)
chr1 (30-88)||(19969304-19969362)
chr1 (20-87)||(17815612-17815679)
chr1 (20-110)||(33560940-33561030)
chr1 (24-110)||(44008689-44008775)
chr1 (23-79)||(12231506-12231562)
chr1 (139-310)||(40419557-40419723)
chr1 (24-110)||(853871-853957)
chr1 (27-85)||(26016572-26016630)
chr1 (29-87)||(32404617-32404675)
chr1 (24-110)||(46388486-46388572)
chr1 (24-110)||(46394930-46395016)
chr1 (30-87)||(28528488-28528545)
chr1 (23-79)||(6299478-6299534)
chr1 (22-66)||(12135861-12135905)
chr1 (20-87)||(7124274-7124341)
chr1 (32-87)||(29577236-29577291)
chr1 (236-310)||(8671838-8671912)
chr1 (23-69)||(15577569-15577615)
chr1 (33-87)||(48431501-48431555)
chr1 (30-87)||(7083023-7083080)
chr1 (20-65)||(10569153-10569198)
chr1 (236-281)||(38807965-38808010)
chr1 (30-91)||(41560358-41560419)
chr1 (30-87)||(50771648-50771705)
chr1 (20-69)||(51812660-51812709)
chr1 (30-69)||(8676957-8676996)
chr1 (20-55)||(17267812-17267847)
chr1 (20-55)||(17275350-17275385)
chr1 (30-69)||(39422019-39422058)
chr1 (20-63)||(43954353-43954396)
chr1 (32-87)||(51584877-51584932)
chr1 (30-76)||(990550-990596)
chr1 (236-310)||(1210663-1210737)
chr1 (33-87)||(8628163-8628217)
chr1 (236-310)||(9592652-9592726)
chr1 (236-310)||(9599684-9599758)
chr1 (30-76)||(26299229-26299275)
chr1 (236-310)||(30202420-30202494)
chr1 (25-79)||(30445252-30445306)
chr1 (23-76)||(7921981-7922034)
chr1 (30-87)||(9599486-9599543)
chr1 (30-63)||(10584989-10585022)
chr1 (32-77)||(16822114-16822159)
chr1 (30-91)||(29807985-29808046)
chr1 (24-69)||(30396815-30396860)
chr1 (30-79)||(39515960-39516009)
chr1 (30-79)||(43367722-43367771)
chr1 (30-78)||(43898371-43898422)
chr1 (30-79)||(52561681-52561730)
chr1 (236-296)||(4379937-4379997)
chr1 (27-87)||(9509451-9509511)
chr1 (35-87)||(10272391-10272443)
chr1 (36-84)||(29128919-29128967)
chr1 (20-56)||(31274483-31274519)
chr1 (236-296)||(40920827-40920887)
chr1 (30-62)||(43375690-43375722)
chr1 (136-212)||(48431601-48431677)
chr1 (25-109)||(52442615-52442699)
[»] chr8 (63 HSPs)
chr8 (25-110)||(4011193-4011278)
chr8 (20-98)||(35643688-35643766)
chr8 (23-111)||(38178345-38178433)
chr8 (20-109)||(10079989-10080078)
chr8 (236-296)||(32043522-32043582)
chr8 (20-79)||(79168-79227)
chr8 (24-87)||(23023358-23023421)
chr8 (30-88)||(16351510-16351568)
chr8 (30-87)||(17491746-17491803)
chr8 (20-84)||(39388918-39388983)
chr8 (30-79)||(39967591-39967640)
chr8 (30-111)||(45512587-45512668)
chr8 (20-68)||(11733899-11733947)
chr8 (31-95)||(38391986-38392050)
chr8 (23-86)||(10108947-10109010)
chr8 (20-111)||(30783124-30783215)
chr8 (20-98)||(16705869-16705947)
chr8 (30-98)||(5908768-5908836)
chr8 (20-111)||(16917292-16917383)
chr8 (20-79)||(24399871-24399930)
chr8 (32-87)||(24558616-24558671)
chr8 (20-87)||(43733340-43733407)
chr8 (33-87)||(9070121-9070175)
chr8 (236-310)||(30456502-30456575)
chr8 (236-294)||(44681329-44681387)
chr8 (20-97)||(9999430-9999506)
chr8 (30-87)||(16994536-16994593)
chr8 (23-84)||(24739933-24739994)
chr8 (30-87)||(28169525-28169582)
chr8 (30-79)||(30198358-30198407)
chr8 (30-111)||(35914693-35914774)
chr8 (20-61)||(38483051-38483092)
chr8 (236-296)||(10080195-10080255)
chr8 (236-296)||(16252867-16252927)
chr8 (236-296)||(16351322-16351382)
chr8 (236-296)||(29520592-29520652)
chr8 (30-98)||(30559815-30559883)
chr8 (31-74)||(3645232-3645275)
chr8 (30-85)||(7531736-7531791)
chr8 (246-296)||(2518691-2518741)
chr8 (33-87)||(9904977-9905031)
chr8 (21-92)||(12692323-12692398)
chr8 (27-69)||(14459046-14459088)
chr8 (236-290)||(16705700-16705754)
chr8 (20-110)||(23492145-23492234)
chr8 (20-86)||(27037769-27037835)
chr8 (23-61)||(33666655-33666693)
chr8 (236-310)||(36395240-36395314)
chr8 (27-85)||(39953353-39953411)
chr8 (25-74)||(3079691-3079740)
chr8 (30-79)||(13589620-13589669)
chr8 (30-79)||(16971846-16971895)
chr8 (30-79)||(29520790-29520839)
chr8 (30-111)||(32931070-32931151)
chr8 (30-111)||(35362742-35362823)
chr8 (20-110)||(37826401-37826487)
chr8 (47-79)||(5127379-5127411)
chr8 (236-296)||(13171939-13171999)
chr8 (240-288)||(13986434-13986482)
chr8 (236-296)||(36069575-36069635)
chr8 (246-290)||(36316301-36316345)
chr8 (164-212)||(41444549-41444597)
chr8 (30-69)||(44175262-44175302)
[»] chr2 (52 HSPs)
chr2 (19-296)||(38434883-38435153)
chr2 (20-109)||(19235066-19235155)
chr2 (20-87)||(33287554-33287621)
chr2 (20-110)||(26784422-26784512)
chr2 (20-86)||(12026087-12026153)
chr2 (30-296)||(9556461-9556718)
chr2 (20-87)||(37481699-37481766)
chr2 (20-78)||(31254430-31254488)
chr2 (20-68)||(8197623-8197671)
chr2 (20-68)||(8202383-8202431)
chr2 (30-69)||(1626346-1626385)
chr2 (20-79)||(18188893-18188952)
chr2 (25-92)||(43832226-43832293)
chr2 (20-69)||(19024329-19024378)
chr2 (30-87)||(26670901-26670958)
chr2 (20-77)||(29548719-29548776)
chr2 (38-79)||(33504364-33504405)
chr2 (20-77)||(37470215-37470272)
chr2 (20-69)||(42149742-42149791)
chr2 (21-97)||(19855585-19855661)
chr2 (30-86)||(45640617-45640673)
chr2 (32-75)||(23915787-23915830)
chr2 (30-69)||(38860329-38860368)
chr2 (30-85)||(42543370-42543425)
chr2 (30-85)||(44437813-44437868)
chr2 (249-296)||(45077680-45077727)
chr2 (30-85)||(33625290-33625349)
chr2 (30-79)||(7431981-7432030)
chr2 (25-74)||(11006853-11006902)
chr2 (24-85)||(42092652-42092713)
chr2 (236-296)||(4598854-4598914)
chr2 (145-212)||(9647813-9647880)
chr2 (30-85)||(12489894-12489949)
chr2 (20-87)||(37452308-37452375)
chr2 (30-69)||(41779202-41779241)
chr2 (236-310)||(7825276-7825350)
chr2 (26-68)||(41022481-41022523)
chr2 (38-68)||(44415782-44415812)
chr2 (20-69)||(12443135-12443184)
chr2 (31-76)||(13149476-13149521)
chr2 (30-63)||(13240855-13240888)
chr2 (30-63)||(14398043-14398076)
chr2 (30-111)||(18959020-18959101)
chr2 (20-65)||(19336975-19337020)
chr2 (135-212)||(23714455-23714532)
chr2 (135-212)||(24102127-24102204)
chr2 (30-87)||(43752039-43752096)
chr2 (25-77)||(3305896-3305948)
chr2 (236-288)||(12734641-12734693)
chr2 (135-207)||(13240939-13241011)
chr2 (20-52)||(32402668-32402700)
chr2 (236-296)||(38429816-38429876)
[»] chr3 (53 HSPs)
chr3 (20-210)||(21200561-21200748)
chr3 (23-110)||(40982006-40982093)
chr3 (30-79)||(36820069-36820118)
chr3 (23-79)||(46431764-46431820)
chr3 (31-86)||(2340810-2340865)
chr3 (30-88)||(11581576-11581634)
chr3 (236-310)||(36820249-36820323)
chr3 (24-97)||(37598256-37598328)
chr3 (30-87)||(39600773-39600830)
chr3 (20-98)||(29475810-29475886)
chr3 (22-69)||(33700334-33700381)
chr3 (23-86)||(43308696-43308759)
chr3 (25-79)||(41452827-41452881)
chr3 (20-98)||(42026618-42026696)
chr3 (24-110)||(44443290-44443376)
chr3 (30-87)||(19676173-19676230)
chr3 (30-111)||(20262423-20262504)
chr3 (23-87)||(21427669-21427731)
chr3 (30-87)||(40116560-40116617)
chr3 (20-87)||(55244410-55244478)
chr3 (47-110)||(31261051-31261114)
chr3 (30-77)||(33307257-33307304)
chr3 (32-87)||(37351540-37351595)
chr3 (30-76)||(45289183-45289229)
chr3 (236-310)||(46568034-46568108)
chr3 (236-310)||(54278938-54279012)
chr3 (27-97)||(54365064-54365134)
chr3 (26-79)||(7278600-7278653)
chr3 (30-87)||(19162679-19162736)
chr3 (30-87)||(26990346-26990403)
chr3 (30-87)||(27893222-27893279)
chr3 (30-63)||(36304123-36304156)
chr3 (20-69)||(44133926-44133975)
chr3 (241-310)||(45728064-45728133)
chr3 (20-69)||(49841767-49841816)
chr3 (30-87)||(50960729-50960786)
chr3 (236-296)||(2341004-2341064)
chr3 (30-98)||(33755434-33755502)
chr3 (236-296)||(45236788-45236848)
chr3 (20-66)||(37534284-37534330)
chr3 (21-75)||(45493775-45493829)
chr3 (236-310)||(51447999-51448073)
chr3 (236-310)||(52138718-52138792)
chr3 (30-91)||(52678942-52679001)
chr3 (25-86)||(37228062-37228123)
chr3 (30-87)||(41087877-41087934)
chr3 (20-69)||(41842605-41842654)
chr3 (33-86)||(45486947-45487000)
chr3 (30-75)||(49042081-49042126)
chr3 (22-58)||(6988063-6988099)
chr3 (236-296)||(28245369-28245429)
chr3 (236-296)||(38054627-38054687)
chr3 (30-66)||(47804755-47804791)
[»] chr5 (54 HSPs)
chr5 (20-269)||(7359342-7359582)
chr5 (24-87)||(27998574-27998637)
chr5 (20-98)||(12576942-12577020)
chr5 (30-210)||(42199299-42199476)
chr5 (20-109)||(14749418-14749507)
chr5 (30-109)||(2713055-2713134)
chr5 (30-295)||(14667690-14667961)
chr5 (20-87)||(38684613-38684680)
chr5 (20-110)||(18698904-18698994)
chr5 (33-110)||(3775162-3775239)
chr5 (20-97)||(30588570-30588647)
chr5 (236-296)||(5305548-5305608)
chr5 (23-111)||(9917535-9917623)
chr5 (20-79)||(5303585-5303644)
chr5 (20-111)||(7678587-7678678)
chr5 (32-98)||(9235171-9235235)
chr5 (20-79)||(43475381-43475439)
chr5 (236-310)||(11002711-11002785)
chr5 (23-69)||(28186860-28186906)
chr5 (20-86)||(42199527-42199593)
chr5 (30-87)||(33667568-33667625)
chr5 (30-86)||(10082837-10082893)
chr5 (20-92)||(37918160-37918232)
chr5 (30-89)||(3775257-3775316)
chr5 (20-79)||(4460349-4460407)
chr5 (241-296)||(6368220-6368275)
chr5 (24-63)||(28005692-28005731)
chr5 (36-79)||(29922425-29922468)
chr5 (20-63)||(39322148-39322191)
chr5 (236-310)||(1287879-1287953)
chr5 (25-87)||(2066130-2066192)
chr5 (30-87)||(28015-28072)
chr5 (30-79)||(6889134-6889183)
chr5 (33-98)||(15489587-15489652)
chr5 (236-296)||(9235001-9235061)
chr5 (27-79)||(17213215-17213267)
chr5 (240-296)||(21952283-21952339)
chr5 (236-296)||(32516490-32516550)
chr5 (236-287)||(683982-684033)
chr5 (246-285)||(8492623-8492662)
chr5 (30-77)||(11675672-11675719)
chr5 (30-85)||(15369889-15369944)
chr5 (164-289)||(31636143-31636261)
chr5 (236-310)||(2075764-2075838)
chr5 (37-87)||(6859514-6859564)
chr5 (25-79)||(11753145-11753199)
chr5 (61-111)||(40938032-40938082)
chr5 (30-67)||(1174642-1174679)
chr5 (235-296)||(21093708-21093769)
chr5 (26-91)||(28676724-28676789)
chr5 (28-79)||(8492423-8492477)
chr5 (39-67)||(24391089-24391117)
chr5 (236-296)||(28186958-28187018)
chr5 (164-212)||(33667227-33667275)
[»] chr6 (25 HSPs)
chr6 (20-98)||(34587-34665)
chr6 (30-296)||(9593800-9594062)
chr6 (30-109)||(10617326-10617405)
chr6 (20-79)||(35199704-35199763)
chr6 (20-98)||(33997626-33997704)
chr6 (25-98)||(1747728-1747801)
chr6 (26-87)||(6055859-6055920)
chr6 (30-79)||(31831951-31832000)
chr6 (30-69)||(1681613-1681652)
chr6 (20-79)||(6293474-6293533)
chr6 (237-296)||(9568592-9568651)
chr6 (30-88)||(31818663-31818721)
chr6 (30-79)||(38904-38953)
chr6 (30-87)||(8364689-8364746)
chr6 (164-293)||(33083993-33084117)
chr6 (37-77)||(579561-579601)
chr6 (20-76)||(1748027-1748083)
chr6 (33-77)||(7080483-7080527)
chr6 (246-294)||(10617526-10617574)
chr6 (236-296)||(33998294-33998354)
chr6 (30-69)||(43144-43183)
chr6 (26-76)||(14389249-14389299)
chr6 (135-224)||(2079339-2079428)
chr6 (227-296)||(7513264-7513333)
chr6 (236-296)||(12134191-12134251)
[»] scaffold0018 (1 HSPs)
scaffold0018 (30-86)||(178512-178568)
[»] scaffold0325 (1 HSPs)
scaffold0325 (31-98)||(11919-11986)
[»] scaffold0015 (1 HSPs)
scaffold0015 (24-99)||(66658-66733)
[»] scaffold0373 (1 HSPs)
scaffold0373 (20-69)||(2383-2432)
[»] scaffold1259 (1 HSPs)
scaffold1259 (26-89)||(1607-1670)
[»] scaffold0279 (1 HSPs)
scaffold0279 (25-80)||(17679-17734)
[»] scaffold1609 (1 HSPs)
scaffold1609 (39-84)||(1054-1099)
[»] scaffold0003 (1 HSPs)
scaffold0003 (35-79)||(346870-346914)


Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 20 - 310
Target Start/End: Original strand, 29653628 - 29653918
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29653628 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattctgcatc 29653727  T
Q  120 cgatcaattctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgtta 219  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29653728 cgatcaactctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgtta 29653827  T
Q  220 cccaaaatctcgctattctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  29653828 cccaaaatctcgctattctctaatgatgtcatttctaattctatcccgtctagtgttaccacacatccaacgcaacagccgtatctctgct 29653918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 28628025 - 28628201
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatccgatcaattc 129  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||||| ||||||| |||  ||||   |||||||||||  | |||| |||| | ||    
T  28628025 aactcattaatctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctctacctcttgtgatttgactatcctccatcggatctactc 28628124  T
Q  130 tacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctact 209  Q
    |    ||||||||||||||||||  | ||||   ||||||||||||| ||||||  | | ||| ||||||| ||||||||    
T  28628125 t---ccttactacataatctacaggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctact 28628201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 38135305 - 38135386
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||||||||||||| |||||| |||||||||||||||| | ||||||| ||||||| |||| |||||| ||| |||||||    
T  38135305 aactcattaatctctaaatcttttttaatagtttctcttatactttttctaggtcttcatctgcctctaatgatctgactat 38135386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 45601666 - 45601609
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  45601666 aactcattaatctctagatctttcttaatggtttctcttatagtttttctaggtcttc 45601609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 30144971 - 30144887
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgac 108  Q
    ||||| |||||||||||||||||||||||||||||||||||||  | ||||||| | |||||| || ||||||||  ||||||||    
T  30144971 ctatccaactcattaatctctagatctttcttaatagtttctcgaatagtttttataggtcttattttgtctctagtgatttgac 30144887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 310
Target Start/End: Original strand, 36514430 - 36514569
Alignment:
Q  164 tacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatctcgctattctctaatgatgtcatttctaattctat 263  Q
    ||||||||||||| |||||| ||||||||  |||||| |||||||||||  || ||||| || ||||       ||||||| |||| |||||||||||||    
T  36514430 tacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactctc-------tctaatgttgtcctttctaattctat 36514522  T
Q  264 ctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    | ||| | || |||||||||||||||||||||| ||  |||||||||    
T  36514523 cccgtttagtcttaccacacatccaacgcaacatcctcatctctgct 36514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 40830392 - 40830324
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||||| |||||||| ||||||||||||||||||| || |||||| ||||||| ||||||||||    
T  40830392 aactcattaatttctagatccttcttaatagtttctcttatagattttctaggtcttcctctgtctcta 40830324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 12966216 - 12966149
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||| || ||||||||||||| || |||||||||||||||||||| ||||||||| |||||||    
T  12966216 atttctatccaaatcattaatctctaaatatttcttaatagtttctcttatagtttttctaggtcttc 12966149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 22174200 - 22174141
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||| |||||||||    
T  22174200 atttctatctaattcattaatctctagatctttgtttatagtttctcttatagtttttct 22174141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 24549770 - 24549841
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttct 91  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| ||   |||||||||||    
T  24549770 atttcaatccaactcattaatctctagatctttcttaatagtttctcttatagttctttcaggtcttcttct 24549841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 28858245 - 28858186
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  28858245 atttctatccaacttattaatctctagatctttcttaatagtttgtcttatagtttttct 28858186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 1569206 - 1569157
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1569206 aactcattaatctctagatctttcttaatagttactcttatagtttttct 1569157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 30814771 - 30814844
Alignment:
Q  38 aatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||||| |||| |||||  ||| |||||||    
T  30814771 aatctctagatctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgatctgactat 30814844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 40139030 - 40139079
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  40139030 atttctatcaaacgcattaatctctagatctttcttaatagtttctctta 40139079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 41461298 - 41461242
Alignment:
Q  21 tttctatctaactcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||    
T  41461298 tttctatccaactcattaatcactagatctttattaatagtttctcttatagttttt 41461242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 46973781 - 46973734
Alignment:
Q  31 actcattaatctctagatctttcttaatagtttctcttacagtttttc 78  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  46973781 actcattaatctctagatgtttattaatagtttctcttacagtttttc 46973734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 43282021 - 43281967
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtc 84  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||| ||||    
T  43282021 aactcattaatctctagatcttacttaattgtttctcttacggtttttctaggtc 43281967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 30664758 - 30664709
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  30664758 aactcattaatctctagatctttcttaatagtttcttttatagtctttct 30664709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 296
Target Start/End: Complemental strand, 39812045 - 39811889
Alignment:
Q  135 cttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatctcgcta 234  Q
    ||||||| | ||||||||| ||||||   ||||||||||||| ||||||  | ||||||||||||  ||||||  |||  || | ||| || ||||        
T  39812045 cttactatagaatctacatctcttctctctacatgcccaaactacctaagccgagttttcaccattttttctatgataggtgctgccccaactctc---- 39811950  T
Q  235 ttctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
     ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||| ||||||    
T  39811949 -tctctaatgttgtcatttctaatcctatcacgtctagtcttaccacacatccaaagcaaca 39811889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 42177110 - 42177190
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    |||||||| |||||||||||||||||||||| |||||||| || ||||||  |||||| ||   |||||| ||||||||||    
T  42177110 aactcatttatctctagatctttcttaatagattctcttataggttttctacgtcttcctccacctctaatgatttgacta 42177190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 9191975 - 9191928
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctct 67  Q
    ||||||||| || | |||||||||||||||||||||||||||||||||    
T  9191975 atttctatcaaatttattaatctctagatctttcttaatagtttctct 9191928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 44401216 - 44401271
Alignment:
Q  29 taactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtc 84  Q
    |||||| |||||||||| ||||||||||||||||||||||| | ||||||| ||||    
T  44401216 taactcgttaatctctaaatctttcttaatagtttctcttataatttttctaggtc 44401271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 14593753 - 14593679
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| |||||||||||||||  |  ||||| || |||||||||||||||||||||| ||  |||||||||    
T  14593753 tctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctcatctctgct 14593679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 37617936 - 37617862
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||| |||| || ||||||| |||||||||||||| ||  |||||||||    
T  37617936 tctctaatggtgtcattcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 37617862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 37976425 - 37976367
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttct 88  Q
    |||||||||||||||| ||||||| || ||||||| |||| ||||||||| ||||||||    
T  37976425 aactcattaatctctaaatctttcatattagtttcacttatagtttttctaggtcttct 37976367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 42103603 - 42103672
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta--cagtttttcttggtcttc 87  Q
    ||||||||| |||||||||| |||| |||||||||||| |||||||||||   ||||||||| |||||||    
T  42103603 atttctatccaactcattaacctcttgatctttcttaacagtttctcttaataagtttttctaggtcttc 42103672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 21517472 - 21517529
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| ||||||||||| || ||| |||||||||||||||| ||||||||| |||||||    
T  21517472 aacttattaatctctaaatattttttaatagtttctcttatagtttttctaggtcttc 21517529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 30200046 - 30200122
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctc 96  Q
    |||| |||| |||||||||||||||||||||||||||| || || | ||| ||||||| |  |||||| ||||||||    
T  30200046 atttatatcaaactcattaatctctagatctttcttaaaagatttttttatagtttttttatgtcttcctctgtctc 30200122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 33072946 - 33072886
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||||||| ||||| |||||| |||| || ||||||| ||||||||||||||    
T  33072946 tctctaatggtgtcattcctaatcctatcttgtctagtcttaccactcatccaacgcaaca 33072886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 40008707 - 40008767
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||||||||||| | | |||| || ||||||||||||| ||||||||    
T  40008707 tctctaatgttgtcatttctaattcttttttgtctagttttaccacacatcctacgcaaca 40008767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 41483682 - 41483639
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctctt 68  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||    
T  41483682 tatccaactcgttaatttctagatctttcttaatagtttctctt 41483639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 16013276 - 16013202
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||||||||||   |  ||||| || |||||||||||||||||||||| ||  |||||||||    
T  16013276 tctctaatgttgtcatttctaatttggttccgtctagtcttaccacacatccaacgcaacatcctcatctctgct 16013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 28562458 - 28562512
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtc 84  Q
    ||||| |||||||||| ||||||| ||||||||||||||| | ||||||| ||||    
T  28562458 aactcgttaatctctaaatctttcataatagtttctcttatattttttctaggtc 28562512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 35906491 - 35906565
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  35906491 tctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 35906565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 14593942 - 14593893
Alignment:
Q  38 aatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||| |  ||||||||||||||||||| ||||||||| |||||||    
T  14593942 aatctctaggttcttcttaatagtttctcttatagtttttctaggtcttc 14593893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 16013465 - 16013416
Alignment:
Q  38 aatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||| |  ||||||||||||||||||| ||||||||| |||||||    
T  16013465 aatctctaggttcttcttaatagtttctcttatagtttttctaggtcttc 16013416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 25826760 - 25826813
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaa 289  Q
    ||||||||| | ||||||||||| ||||||||| |||| |||||||| ||||||    
T  25826760 tctctaatgttttcatttctaatcctatctcgtatggtcttaccacatatccaa 25826813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 28542036 - 28542069
Alignment:
Q  30 aactcattaatctctagatctttcttaatagttt 63  Q
    |||||||||||||||| |||||||||||||||||    
T  28542036 aactcattaatctctaaatctttcttaatagttt 28542069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 29229600 - 29229641
Alignment:
Q  57 atagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||||||| |||||||||||||||||||| |||| |||||    
T  29229600 atagtttctcgtacagtttttcttggtcttcctctgcctcta 29229641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 36239888 - 36239937
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||| |||||||||| || |||| ||||||||||||||| |||||||||    
T  36239888 aactcgttaatctctaaatttttcctaatagtttctcttatagtttttct 36239937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 48736200 - 48736249
Alignment:
Q  247 gtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||||||| |||||| ||| || ||||||||||| ||||||||||    
T  48736200 gtcatttctaattttatctcatctagtcttaccacacattcaacgcaaca 48736249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 5336108 - 5336072
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctc 66  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  5336108 aactcattaatctctagatcattcttaatagtatctc 5336072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 27021915 - 27021963
Alignment:
Q  164 tacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
    ||||||||||||| ||||||  ||||||||||||| | |||||||||||    
T  27021915 tacatgcccaaaccacctaagcctagttttcaccaacttttctactata 27021963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 30914588 - 30914632
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctctt 68  Q
    ||||| |||||||||||||||||||| ||| | ||||||||||||    
T  30914588 ctatccaactcattaatctctagatccttcatgatagtttctctt 30914632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 34869412 - 34869352
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| ||||||||||||||    
T  34869412 tctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaaca 34869352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 35922443 - 35922407
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctc 66  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  35922443 aactcattaacctctaaatctttcttaatagtttctc 35922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 36651986 - 36651926
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| ||||||||||||||    
T  36651986 tctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaaca 36651926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 43282609 - 43282545
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtc 84  Q
    ||||| ||| |||||| ||| ||| ||| ||| ||||||||||||||||| ||||||||| ||||    
T  43282609 atttcgatccaactcaataacctcaagaacttacttaatagtttctcttatagtttttctaggtc 43282545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 296
Target Start/End: Complemental strand, 54470407 - 54470139
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatc 119  Q
    ||||||||| |||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||| || |||||   ||||||||| | | |||     
T  54470407 atttctatccaactcattaatctctagaactttattaatagattctcttatagtttttcttggtcttcttttgcctctagtaatttgactactctccatt 54470308  T
Q  120 cgatcaattctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgtta 219  Q
     |||  | |||    ||||||||||||| ||||| ||||||   ||||||||||||| || ||| |||||||| ||||||| |||||||||||  || ||    
T  54470307 tgatttactct---ccttactacataatttacatgtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgcta 54470211  T
Q  220 cccaaaatctcgctattctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||| || ||||     ||||||||| ||| ||||| |||  |||| | ||| || ||||||||||||||| ||||||    
T  54470210 ccccaactctc-----tctctaatgttgttatttcaaatcatatcccatctagtcttaccacacatccaatgcaaca 54470139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 42639102 - 42639161
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  42639102 atttctatccaactcattaatcgctagatctttcttaatagtttctcttgcagtttttct 42639161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 47147570 - 47147495
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||| ||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||| |||| |||||    
T  47147570 tctatccaactcattaatctctagatctttcttaatagtttcttctatagtttttctaggtcttcctctgcctcta 47147495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 7681992 - 7682070
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||  ||||||| |||| |||||    
T  7681992 atttctatctaactcattaatctatagatttttcttgatagtttctcttatagtttttccaggtcttcctctgcctcta 7682070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 42293350 - 42293404
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  42293350 tctatctaactcattaatttctagatctttcttaatagtttctcttatagttttt 42293404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 8599023 - 8599091
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttct 88  Q
    |||||| |||||||||||||  | |||||||||||||||||||||||||| ||||||||| ||||||||    
T  8599023 atttctttctaactcattaacatttagatctttcttaatagtttctcttatagtttttctaggtcttct 8599091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 10209226 - 10209171
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  10209226 aactcattaatctctagatccttcttaatagtttctcttatagtttttctaggtct 10209171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 20999190 - 20999115
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgattt 105  Q
    |||||||||| ||||||||||||||||||||||| | ||| ||||||||| ||||||| ||||| ||||| |||||    
T  20999190 aactcattaaactctagatctttcttaatagtttatattatagtttttctaggtcttcctctgtttctaatgattt 20999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 38903803 - 38903889
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||| || |||||| ||||||| |||| ||||| | |||||||||    
T  38903803 tctatcaaactcattaatctttaggtctttcttaatagtttctcttatag-ttttctaggtcttcatctgcctctagccatttgacta 38903889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 6843815 - 6843766
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  6843815 atttctatcaaactcattaatctctagatctttcttaatagtctctctta 6843766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 7544605 - 7544654
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  7544605 atttcgatcaaactcattaatctctagatctttcttaatagtttctctta 7544654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 37042746 - 37042795
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  37042746 atttctatccaactcaataatctctagatctttcttaatagtttctctta 37042795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 296
Target Start/End: Complemental strand, 44360174 - 44360015
Alignment:
Q  135 cttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatctcgcta 234  Q
    ||||||||||  || |||| ||||||   |||||||||||||||||||| ||||||||  |||||| |||||||||||  || ||||| || |||| ||     
T  44360174 cttactacatcgtccacatgtcttctctctacatgcccaaacaacctaa-tctagtttctaccatcttttctactataggtgataccccaactctctctc 44360076  T
Q  235 ttctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
       ||||||  |||||||||||||||||||||| || ||  ||||||||||||||| |||||    
T  44360075 ca-tctaatattgtcatttctaattctatctcgcctagtcctaccacacatccaacacaaca 44360015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 296
Target Start/End: Original strand, 25967346 - 25967617
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatccga 122  Q
    |||||| || || ||||||||||||||||| |||||||||||||||| |||| |||   |||||| ||||||||||  ||||| |||||  | |||| ||    
T  25967346 tctatccaattcgttaatctctagatcttttttaatagtttctcttatagttattcaaagtcttcctctgtctctagtgatttaactatccttcatctga 25967445  T
Q  123 tcaattctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttaccc 222  Q
    || | |||    ||||||| | |||||| | | | ||||  |||||||||||| ||| ||| || || || ||||||| ||||||| ||| ||  |||||    
T  25967446 tctactct---ccttactaaagaatctaaacaacctcttgctacatgcccaaagaacttaagtcaagattccaccatcttttctacgatagatactaccc 25967542  T
Q  223 aaaatctcgctat-tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
      | |||| || | |||||||||  |||||||||||| ||| |  |||| || |||||||||||||| |||||||    
T  25967543 cgactctctctctctctctaatgtagtcatttctaatcctaccatgtctagtcttaccacacatccatcgcaaca 25967617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 934517 - 934572
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  934517 ctatccaactcattaatctctagaactttcttaatagtttctctaatagtttttct 934572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 31961358 - 31961413
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  31961358 aactcatttatctctagatctttcctaatagtttctcttatagtttttctaggtct 31961413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 37488281 - 37488226
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  37488281 aacttattaatttctagatctttcttaatagtttctcttatagtttttctaggtct 37488226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 45569094 - 45569169
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||| | | ||||| ||||||| |||| |||||    
T  45569094 tctatccaactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctcta 45569169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 50680930 - 50680875
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||||| |||||    
T  50680930 aactcattaatctctagatctttctaaataatttctcttatagtttttctaggtct 50680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 26024942 - 26024988
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||    
T  26024942 aactcattaatctctagatctttcttaatagtttctcatatagtttt 26024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 20105760 - 20105821
Alignment:
Q  235 ttctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||||||||| |||||||||||||  |||||||||| || |||||||||||||| |||||||    
T  20105760 ttctctaatgttgtcatttctaatcatatctcgtctagtcttaccacacatccatcgcaaca 20105821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 26356809 - 26356752
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||||||| ||| ||| ||||||||||| ||||||||| |||||||    
T  26356809 aactcattaatctctagatccttcataacagtttctcttatagtttttctaggtcttc 26356752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 31043262 - 31043193
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaa 99  Q
    |||||||||||||||| ||||||| ||||||||||||||  ||||| ||| ||||||| ||| |||||||    
T  31043262 aactcattaatctctaaatctttcctaatagtttctcttttagtttatctgggtcttcctctttctctaa 31043193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 53517717 - 53517652
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||  |||||| |||| |||||    
T  53517717 tcattaatctctagttcttttttgatagtttctcttacagtttttctaagtcttcctctgcctcta 53517652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 26025011 - 26025047
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctc 66  Q
    |||||||||||||||||||||||||||||||||||||    
T  26025011 aactcattaatctctagatctttcttaatagtttctc 26025047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 28351749 - 28351693
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    |||||| ||||||||| ||||||| ||||||||||||||| ||||||||| ||||||    
T  28351749 aactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctt 28351693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 34233112 - 34233184
Alignment:
Q  26 atctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||||||||||||||| ||||| | |||||||||||| | ||||||||| ||| ||| |||| |||||    
T  34233112 atctaactcattaatctctaggtctttatgaatagtttctctgatagtttttctaggttttcctctgcctcta 34233184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 44667337 - 44667417
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||| ||||||||||||| |||||| |||||||||  || ||||||||  |||||||||||| |||||  ||||||||||    
T  44667337 aactcgttaatctctagatttttcttgatagtttctaatatagtttttcgaggtcttcttctgcctctagtgatttgacta 44667417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 47372851 - 47372795
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    ||||||||| ||||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  47372851 atttctatccaactcattaatctctggatctttattagtagtttctcttatagtttt 47372795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 2557754 - 2557813
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||| ||| ||||| |||||||  ||||| |||||||||||||||||||||||||||||    
T  2557754 atttcgatccaactcgttaatcttcagatccttcttaatagtttctcttacagtttttct 2557813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 18966793 - 18966734
Alignment:
Q  32 ctcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttct 91  Q
    |||| |||||| |||||||||||||||||||||||||| |||| || | |||||||||||    
T  18966793 ctcactaatctgtagatctttcttaatagtttctcttatagttgttttaggtcttcttct 18966734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 20047632 - 20047581
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtt 74  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||| ||||    
T  20047632 tctatccaactcattaatctctagatcttctttaatagtttctcttatagtt 20047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 21214668 - 21214727
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||| || ||||||||| ||| |||| ||||||||||||||||||||| |||||||||    
T  21214668 atttctctccaactcattactctatagacctttcttaatagtttctcttatagtttttct 21214727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 31403116 - 31403171
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagttt 75  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||| ||||| |||||    
T  31403116 atttctatccaactaattaatctctagatctttcataatagtttttcttatagttt 31403171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 31897520 - 31897575
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||| ||||||||||| ||| ||||||||||||||| ||||||||| |||||    
T  31897520 aactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtct 31897575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 33225924 - 33225979
Alignment:
Q  29 taactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtc 84  Q
    |||||| |||||||||| ||||||||||||||||||||||| | ||||||| ||||    
T  33225924 taactcgttaatctctaaatctttcttaatagtttctcttataatttttctaggtc 33225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 296
Target Start/End: Complemental strand, 33709982 - 33709851
Alignment:
Q  165 acatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatctcgctattctctaatgatgtcatttctaattctatc 264  Q
    ||||||| |||| ||||||| ||||||| ||||||| |||||||||||  |||||||| || ||||     ||||||||| || |||||||||| |||||    
T  33709982 acatgcctaaaccacctaaacctagtttccaccatcttttctactataggtgttaccccaactctc-----tctctaatgttgccatttctaatcctatc 33709888  T
Q  265 ---tc--gtctggtgttaccacacatccaacgcaaca 296  Q
       ||  |||| || ||||||||||||||||||||||    
T  33709887 ctatcatgtctagtcttaccacacatccaacgcaaca 33709851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 40018275 - 40018330
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||| |||||||| ||||||||||||||||||| ||||| ||||| |||||||||    
T  40018275 ctatccaactcattgatctctagatctttcttaacagtttttcttatagtttttct 40018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 44719443 - 44719536
Alignment:
Q  20 atttctatctaactcattaatc---tctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    |||||||||||||||||||||    | |||||||||||||||||||||| ||| | ||||||| ||||||| || | |||||| ||||| ||||    
T  44719443 atttctatctaactcattaataatatttagatctttcttaatagtttcttttatattttttctaggtcttcctcagcctctaatgatttaacta 44719536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 46372214 - 46372159
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||| ||||||||||| ||| ||||||||||||||| ||||||||| |||||    
T  46372214 aactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtct 46372159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 49987580 - 49987517
Alignment:
Q  48 tctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||| |||||  || ||||||||    
T  49987580 tctttcttaatagtttctcttatagtttttctaggtcttcctctgcctctagtgaattgactat 49987517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 21879238 - 21879292
Alignment:
Q  23 tctatctaactcattaatctctagatctttctt-aatagtttctcttacagtttt 76  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  21879238 tctatccaactcattcatctctagatctttcttgaatagtttctcttatagtttt 21879292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 25575024 - 25574982
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtt 62  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  25575024 atttcgatccaactcattaatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 33710124 - 33710078
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctc 66  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||    
T  33710124 atttctatccaactcattaatctctagatcagtcttaatagtttctc 33710078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 290
Target Start/End: Original strand, 45185307 - 45185361
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaac 290  Q
    ||||||||| ||||||||||||||||||||| ||| || |||| |||||||||||    
T  45185307 tctctaatgttgtcatttctaattctatctcatctagtcttactacacatccaac 45185361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 49738636 - 49738698
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    ||||| ||||||||||| |||||||| ||||||||||||| | ||| ||||||||| ||||||    
T  49738636 ctatccaactcattaatttctagatccttcttaatagtttttattatagtttttctaggtctt 49738698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 2588970 - 2588913
Alignment:
Q  239 ctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||||| ||||||||||||| ||||| | ||| || ||||||||||||||||||||||    
T  2588970 ctaatgttgtcatttctaatcctatcccttctagtcttaccacacatccaacgcaaca 2588913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 10209030 - 10208977
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaa 289  Q
    ||||||||| ||||||||||||||||||| | ||| || |||||||||||||||    
T  10209030 tctctaatgttgtcatttctaattctatcccatctagtcttaccacacatccaa 10208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 30853533 - 30853484
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||| ||||| |||| ||||||||||||||| |||||||||    
T  30853533 aactcattaatctttagatttttcataatagtttctcttatagtttttct 30853484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 35690461 - 35690404
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||| ||||| || |||| ||||||||||||||| ||||||||| |||||||    
T  35690461 aactcattaacctctaaatttttcgtaatagtttctcttatagtttttctaggtcttc 35690404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 45204931 - 45204988
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| ||||| ||||| ||||||| ||||||||||||||| ||||||||| |||||||    
T  45204931 aacttattaaactctaaatctttcctaatagtttctcttatagtttttctaggtcttc 45204988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 55809082 - 55809139
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||| ||||| ||||||| ||| ||||||||||| ||||||||| |||||||    
T  55809082 aactcattaacctctaaatctttcctaacagtttctcttatagtttttctaggtcttc 55809139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 8459127 - 8459207
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||| ||||||||||||| |||||||||||||| ||||  ||||||| | ||||||| |||| || ||  ||||||||||    
T  8459127 aactctttaatctctagatttttcttaatagtttatcttttagtttttttaggtcttcctctgcctttagtgatttgacta 8459207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 17900472 - 17900412
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||||||||  ||||||||||||| |||| | ||| || ||||||||||||||||||||||    
T  17900472 tctctaatgtcgtcatttctaattttatcccatctagtcttaccacacatccaacgcaaca 17900412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 21106972 - 21106916
Alignment:
Q  240 taatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||| ||||||||||||||||||| ||||| || |||||||||||| ||| |||||    
T  21106972 taatgttgtcatttctaattctatcacgtctagtcttaccacacatcgaacccaaca 21106916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 25257869 - 25257929
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||||||||||||||  |||| || |||| ||||||||||| |||||    
T  25257869 tctctaatgttgtcatttctaattctatcatgtctagtcttactacacatccaacacaaca 25257929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 41192261 - 41192221
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatag 60  Q
    ||||||||| |||||||||||||||||||||||||| ||||    
T  41192261 atttctatccaactcattaatctctagatctttctttatag 41192221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 44686662 - 44686730
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||| ||||||||||||| |||||| |||||||||  || ||||||||  |||||||||||| |||||    
T  44686662 aactcgttaatctctagatttttcttgatagtttctaatatagtttttcgaggtcttcttctgcctcta 44686730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 45423607 - 45423551
Alignment:
Q  240 taatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||| ||||||||||||||||||| ||||| || |||||||||| ||||| |||||    
T  45423607 taatgttgtcatttctaattctatcccgtctagtcttaccacacaaccaacacaaca 45423551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 53540480 - 53540412
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||||||||||| |  |||||| ||||||||| ||||| ||||||||| ||||||| |||| |||||    
T  53540480 aactcattaatctccaagtctttcctaatagtttatcttatagtttttctaggtcttcctctgcctcta 53540412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 40654209 - 40654268
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||| |||||||||||||||||| || ||||||||| ||||||||| ||| | |||||||    
T  40654209 atttatatctaactcattaatctttacatctttcttgatagtttcttttataatttttct 40654268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 43069903 - 43069978
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||| |||| ||||| |||||||||||||| |||||||||| | | ||||||| |  ||||||||||| |||||    
T  43069903 tctatccaacttattaaactctagatctttctcaatagtttctttcatagtttttgtaagtcttcttctgcctcta 43069978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 50662588 - 50662529
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||| ||| ||||||||||||||||||||||| | |||| ||||||||| | |||||||    
T  50662588 atttcgatcaaactcattaatctctagatctttttaaataatttctcttataatttttct 50662529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 51252555 - 51252594
Alignment:
Q  40 tctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  51252555 tctctaggtctttcttaatagtttcttttacagtttttct 51252594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 12494742 - 12494668
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  12494742 tctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 12494668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 22420802 - 22420843
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttct 65  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  22420802 tctatccaactcattaatctctagatctttctt-atagtttct 22420843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 23906591 - 23906665
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||| |||| || || |||| |||||||||||||| ||  |||||||||    
T  23906591 tctctaatggtgtcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgct 23906665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 31960104 - 31960178
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  31960104 tctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 31960178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 42285897 - 42285971
Alignment:
Q  138 actacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
    |||||| |||| |||  ||||||  |||||||||||||| |||||| ||||||||  |||||| |||||||||||    
T  42285897 actacagaatccacaggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactata 42285971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 43433910 - 43433836
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||| |||| || || |||| |||||||||||||| ||  |||||||||    
T  43433910 tctctaatggtgtcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgct 43433836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 51421917 - 51421871
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||| ||||| ||||||| ||||||||||||||| |||||||||    
T  51421917 tcattaacctctaaatctttcctaatagtttctcttatagtttttct 51421871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 56375282 - 56375208
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| |||||  ||||| |||| || ||||||| |||||||||||||| ||  |||||||||    
T  56375282 tctctaatggtgtcattcctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 56375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 17666131 - 17666184
Alignment:
Q  26 atctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||||||| || ||||||  ||||||||||||||| | |||||||    
T  17666131 atctaactcattaatctataaatcttttctaatagtttctcttatattttttct 17666184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 17900670 - 17900621
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||| ||||||| ||||||| | ||||||||||||| |||||||||    
T  17900670 aactcatttatctctatatctttcctgatagtttctcttaaagtttttct 17900621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 20105610 - 20105659
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||| ||||||||||||||||||| | |||||| ||| |||||||||    
T  20105610 aactcatcaatctctagatctttcttagtcgtttcttttatagtttttct 20105659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 21107182 - 21107125
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| ||||||| ||| | ||||| ||||||||||||||| ||||||||| |||||||    
T  21107182 aactaattaatcactaaaactttcctaatagtttctcttatagtttttctaggtcttc 21107125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 29182642 - 29182605
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctct 67  Q
    |||||||||||||||||||  |||||||||||||||||    
T  29182642 aactcattaatctctagatacttcttaatagtttctct 29182605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 30621297 - 30621330
Alignment:
Q  34 cattaatctctagatctttcttaatagtttctct 67  Q
    |||||||||||| |||||||||||||||||||||    
T  30621297 cattaatctctaaatctttcttaatagtttctct 30621330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 40268364 - 40268401
Alignment:
Q  39 atctctagatctttcttaatagtttctcttacagtttt 76  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  40268364 atctctagatttttcttaatagtttctcttatagtttt 40268401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 44047458 - 44047491
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaat 58  Q
    |||| |||||||||||||||||||||||||||||    
T  44047458 tatccaactcattaatctctagatctttcttaat 44047491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 44385025 - 44384988
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtt 62  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  44385025 tatccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 44641893 - 44641978
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    |||| ||||||||||| ||||||| |||||| || ||||||  || ||||||||   |||||||||||||| ||  ||||||||||    
T  44641893 tatccaactcattaatgtctagatttttcttgattgtttctaatatagtttttcgaagtcttcttctgtctttagtgatttgacta 44641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 55029021 - 55028984
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaa 57  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  55029021 atttctatctagctcattaatctctagatcattcttaa 55028984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 1777305 - 1777365
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| ||||||||||||||    
T  1777305 tctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaaca 1777365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 13805357 - 13805425
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||| |||| |||| | ||||||||| ||||||||||||| ||||||||| ||| ||| |||| |||||    
T  13805357 aacttattactctcaaaatctttcttcatagtttctcttatagtttttctaggttttcctctgcctcta 13805425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 43070054 - 43070114
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||||||||||||| |||||  ||||  | |||||||||||||||| |||||    
T  43070054 tctctaatgttgtcatttctaatcctatcctgtctaatcttaccacacatccaacccaaca 43070114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 44861014 - 44860966
Alignment:
Q  39 atctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||||||| |||||||||| |||| ||||||||  |||||||    
T  44861014 atctctagatctttcataatagtttcccttatagtttttcaaggtcttc 44860966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 48033285 - 48033229
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    ||||||||  || |||||||| || |||| |||||||||||||||||||| ||||||    
T  48033285 atttctatacaaatcattaatttccagatatttcttaatagtttctcttatagtttt 48033229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 55388293 - 55388333
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatag 60  Q
    ||||| |||||||||||||||||| | ||||||||||||||    
T  55388293 atttcgatctaactcattaatctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 40416571 - 40416382
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatc 119  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |   ||| |||||||  ||||||    
T  40416571 atttcgatccaactcattaatctatagatctttcttaatagtttgtcttatagtttttctaggtcttcttctgtctttggtgatctgactatcctgcatc 40416472  T
Q  120 cgatcaattctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
     |||| | |||    ||||||||| ||||||||  ||||||   |||||||| |||| ||||||  || |||| ||||||| |||||||||||    
T  40416471 tgatctactct---ccttactacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactata 40416382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 296
Target Start/End: Complemental strand, 43423919 - 43423649
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatc 119  Q
    ||||||||| |||||| |||||||||||||||||||||| || ||||||  | ||||||| ||||||| |||  |||||  |||||||||| | | ||||    
T  43423919 atttctatccaactcactaatctctagatctttcttaatggtctctcttgtaatttttctaggtcttcctctacctctagtgatttgactactatccatc 43423820  T
Q  120 cgatcaattctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgtta 219  Q
       || | |||||   |||||||||||||||||  ||||||   |||||| |||||| ||||||  ||||||| ||||||| |||||||||||  |||||    
T  43423819 tagtctactctac---ttactacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgtta 43423723  T
Q  220 cccaaaatctcgctattctctaatgatgtcatttctaattctatctcgtctggtgtt--accacacatccaacgcaaca 296  Q
    ||| || ||||     |||||||||  |||||||||||| |||||  |||| || ||   |||||||||||||||||||    
T  43423722 ccccaactctc-----tctctaatgtggtcatttctaatcctatcctgtctagtcttcccccacacatccaacgcaaca 43423649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 38869079 - 38868992
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    |||||| ||| |||||||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||| |||||| ||||||||||    
T  38869079 tctatccaacccattaatcgctagatctttcttaataatttctcttatagtttttctaggtcttcttctgcctctaatgatttgacta 38868992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 30834059 - 30834149
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||| || |||||| ||||||| |||  ||||| |||||||||||    
T  30834059 atttctatccaactcattaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctctccctctatcgatttgacta 30834149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 6025805 - 6025715
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||| ||||||||||||||||||||||| ||| |||| ||||||| ||||||||| ||||||| |||| |||||  ||||||||||    
T  6025805 atttctatccaactcattaatctctagatcttttttactagtatctcttatagtttttctaggtcttcctctgcctctagtgatttgacta 6025715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 8342963 - 8343041
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||||| ||| ||||||    
T  8342963 atttctatccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctctatctcta 8343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 42501308 - 42501218
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||| ||| |||  |||||| ||||||||||    
T  42501308 atttctatccaactcattaatctatagatctttcttaataatttctcttatagtttttctaggttttcctctacctctaatgatttgacta 42501218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 8203226 - 8203287
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttct 91  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  8203226 aactcattaatctctagatcttttttaatagtttctcttatagtttttctaggtcttcttct 8203287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 8796409 - 8796318
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    ||||| ||| || |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||  ||| |||||||    
T  8796409 atttcaatccaagtcattaatatctagatctttcttaatagtttctcttaaagtttttattggtcttcctctgcctctagtgatctgactat 8796318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 3818938 - 3819016
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||| ||| ||||||    
T  3818938 atttctattcaactcattaatctctaaatctttcttaatagtttctcttatagtttttcaaggtcttcctctttctcta 3819016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 19969304 - 19969362
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttct 88  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  19969304 aactcattaatctctagatctttgttaatagtttctcttatagtttttctaggtcttct 19969362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 17815679 - 17815612
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||||||| | ||||||| |||||||    
T  17815679 atttctatctaactcatcaatcactagatctttctaaatagtttctcttataatttttctaggtcttc 17815612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 33560940 - 33561030
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    |||| |||| |||||  ||||||||||||||| |||||||||||| |||||||||||||| || |||| |||| |||||  ||||||||||    
T  33560940 atttatatccaactcgctaatctctagatcttacttaatagtttcccttacagtttttctaggacttcctctgcctctagtgatttgacta 33561030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 44008775 - 44008689
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||| |||||||| ||||||||||||||||  ||||||||||||| | ||||||| ||||||| |||| |||||  ||||||||||    
T  44008775 ctatccaactcattgatctctagatctttctcgatagtttctcttagattttttctaggtcttcctctgcctctagtgatttgacta 44008689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 12231562 - 12231506
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  12231562 tctatccaactcattaatctcgagatctttcttaatagtctctcttatagtttttct 12231506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 310
Target Start/End: Complemental strand, 40419723 - 40419557
Alignment:
Q  139 ctacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatctcgctattct 238  Q
    |||||||||| |||| ||||||   ||||||||||||| || ||| |||||||   ||||||  ||||||||||| |  ||||| || ||||     |||    
T  40419723 ctacataatccacatgtcttctctctacatgcccaaaccacttaagtctagttactaccatctattctactataagttctaccccaactctc-----tct 40419629  T
Q  239 ctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    |||||| ||||||||||||||||||||| ||| || |||||| |||| ||||||| || ||  |||||||||    
T  40419628 ctaatgttgtcatttctaattctatctcatctagttttaccatacattcaacgcaccatcctcatctctgct 40419557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 853871 - 853957
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||| |||||| ||||||||||||| |||||||||||||||| || || |||| | ||||||| |||| |||||  ||||||||||    
T  853871 ctatccaactcactaatctctagatccttcttaatagtttctcgtatagattttttaggtcttcctctgcctctagtgatttgacta 853957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 26016630 - 26016572
Alignment:
Q  27 tctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||| |||||    
T  26016630 tctaactcatttatctctagatcattcctaatagtttctcttatagtttttctaggtct 26016572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 32404617 - 32404675
Alignment:
Q  29 taactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||||| | |||||||    
T  32404617 taactcattaatctctaaatctttcctaatagtttctcttatagtttttgtaggtcttc 32404675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 46388572 - 46388486
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||| ||||||| |||||||||||| ||||||| ||||||||||| ||||||||| || |||| | ||||| ||| ||||| ||||    
T  46388572 ctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaacta 46388486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 46395016 - 46394930
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||| ||||||| |||||||||||| ||||||| ||||||||||| ||||||||| || |||| | ||||| ||| ||||| ||||    
T  46395016 ctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaacta 46394930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 28528545 - 28528488
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||| | |||||||    
T  28528545 aactcattaatctctagatccttcttaatagtttctgttatagtttttttaggtcttc 28528488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 6299478 - 6299534
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||| | |||||||    
T  6299478 tctatcaaactcattaatctctagatctttcttaacaatttctcttataatttttct 6299534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 12135905 - 12135861
Alignment:
Q  22 ttctatctaactcattaatctctagatctttcttaatagtttctc 66  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  12135905 ttctatccaactcattaatctctagatttttcttaatagtttctc 12135861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 7124341 - 7124274
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||| || |||||||||  ||||||||||| |||||||||||||| ||||||| ||| |||||    
T  7124341 atttctatccaattcattaatcaatagatctttctcaatagtttctcttatagtttttattgatcttc 7124274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 29577236 - 29577291
Alignment:
Q  32 ctcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||||||||||||||||||| | ||  ||||||||| |||||||    
T  29577236 ctcattaatctctagatctttcttaatagtttatgttgtagtttttctaggtcttc 29577291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 8671912 - 8671838
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| || ||||||||||    
T  8671912 tctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatccttatctctgct 8671838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 15577615 - 15577569
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||    
T  15577615 tctatccaactcattaatctctatatccttcttaatagtttctctta 15577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 48431501 - 48431555
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||| | |||||||    
T  48431501 tcataaatctctaaatctttcttaatagtttctcttatagtttttttgggtcttc 48431555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 7083080 - 7083023
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||||||||| ||  |||||||||||||||||| || |||||| |||||||    
T  7083080 aactcattaatctctagttccatcttaatagtttctcttatagcttttctaggtcttc 7083023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 10569153 - 10569198
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttct 65  Q
    ||||||||| | || |||||||||||||||||||||||||||||||    
T  10569153 atttctatccagcttattaatctctagatctttcttaatagtttct 10569198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 38807965 - 38808010
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccac 281  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||    
T  38807965 tctctaatggtgtcatttctaattctatcccgtctggtcttaccac 38808010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 41560419 - 41560358
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttct 91  Q
    |||||||||||||||| || | || ||||||||||||||| || |||||| |||||||||||    
T  41560419 aactcattaatctctaaatgtatcctaatagtttctcttatagcttttctaggtcttcttct 41560358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 50771648 - 50771705
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| |||||||||||| || |||||||||||||| |||| ||||||||| |||||||    
T  50771648 aacttattaatctctaggtccttcttaatagtttcgcttatagtttttctaggtcttc 50771705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 51812709 - 51812660
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||| ||||||||||||||  |||||||||||||||| |||||||||||    
T  51812709 atttcgatctaactcattaacatctagatctttcttaaaagtttctctta 51812660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 8676957 - 8676996
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctctta 69  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  8676957 aactcattaatctctaaatcttttttaatagtttctctta 8676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 17267812 - 17267847
Alignment:
Q  20 atttctatctaactcattaatctctagatctttctt 55  Q
    ||||||||||||||||||||| ||||||||||||||    
T  17267812 atttctatctaactcattaatttctagatctttctt 17267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 17275385 - 17275350
Alignment:
Q  20 atttctatctaactcattaatctctagatctttctt 55  Q
    ||||||||||||||||||||| ||||||||||||||    
T  17275385 atttctatctaactcattaatttctagatctttctt 17275350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 39422019 - 39422058
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctctta 69  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  39422019 aactcatttatctctagatctttcttattagtttctctta 39422058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 43954396 - 43954353
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagttt 63  Q
    ||||||||| |||||||||||||||||||||||  |||||||||    
T  43954396 atttctatcaaactcattaatctctagatcttttgtaatagttt 43954353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 51584932 - 51584877
Alignment:
Q  32 ctcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||| || |||||  |||||||||||||||||| ||||||||| |||||||    
T  51584932 ctcattaatgtccagatccctcttaatagtttctcttatagtttttctaggtcttc 51584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 990550 - 990596
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    ||||||||||||||||||||| ||| |||||||||||| | ||||||    
T  990550 aactcattaatctctagatctatctcaatagtttctctaatagtttt 990596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 1210737 - 1210663
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  1210737 tctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 1210663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 8628217 - 8628163
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||| ||||| ||||||| ||||||||||| ||| ||||||||| |||||||    
T  8628217 tcattaacctctaaatctttcctaatagtttctgttatagtttttctaggtcttc 8628163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 9592726 - 9592652
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  9592726 tctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 9592652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 9599684 - 9599758
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||||||||||| |||||  |||| ||||| || ||||||| |||||||| ||||| ||  |||||||||    
T  9599684 tctctaatgatgtcattcctaatcatatcccgtctagtcttaccactcatccaacacaacatcctcatctctgct 9599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 26299275 - 26299229
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    |||||||||| ||||| ||||||| ||||||||||||||| ||||||    
T  26299275 aactcattaacctctaaatctttcataatagtttctcttatagtttt 26299229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 30202420 - 30202494
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  30202420 tctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 30202494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 30445306 - 30445252
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||| ||||||||||||||||||||  |||| |||||||||||||  ||||||||    
T  30445306 tatccaactcattaatctctagatccctcttgatagtttctcttatcgtttttct 30445252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 7922034 - 7921981
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    |||||| |||||||||||||||||||| || ||| |||||||| ||| ||||||    
T  7922034 tctatccaactcattaatctctagatcgtttttactagtttcttttatagtttt 7921981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 9599486 - 9599543
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||| ||||| || |||| ||||||||||||||  ||||||||| |||||||    
T  9599486 aactcattaaactctaaatatttcctaatagtttctcttgtagtttttctaggtcttc 9599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 10584989 - 10585022
Alignment:
Q  30 aactcattaatctctagatctttcttaatagttt 63  Q
    ||||||||||||||| ||||||||||||||||||    
T  10584989 aactcattaatctctggatctttcttaatagttt 10585022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 16822114 - 16822159
Alignment:
Q  32 ctcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    |||||||||||||| |||||||||| |||||||||||  |||||||    
T  16822114 ctcattaatctctacatctttcttactagtttctcttgtagttttt 16822159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 29808046 - 29807985
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttct 91  Q
    ||||| ||||| | |||||| ||||| || |||||||||| ||||||||| |||||||||||    
T  29808046 aactcgttaatatttagatccttcttgatcgtttctcttatagtttttctaggtcttcttct 29807985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 30396815 - 30396860
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||| ||||||||||||||| |||| ||||||| |||||||||||    
T  30396815 ctatccaactcattaatctctggatccttcttaacagtttctctta 30396860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 39515960 - 39516009
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||| ||||| | ||||||||||||||||| || |||||||||    
T  39515960 aactcattaatttctaggtttttcttaatagtttctcgtatagtttttct 39516009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 43367722 - 43367771
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||| ||||||||| || ||||||||| ||| |||||||||    
T  43367722 aactcattaatctttagatctttgttgatagtttcttttatagtttttct 43367771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 43898422 - 43898371
Alignment:
Q  30 aactcattaatctctagatctttctt---aatagtttctcttacagtttttc 78  Q
    |||||||||||||||||||| |||||   |||||||||||||| ||||||||    
T  43898422 aactcattaatctctagatccttcttctaaatagtttctcttatagtttttc 43898371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 52561681 - 52561730
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||| ||||| ||||||| ||| ||||||||||| |||||||||    
T  52561681 aactcattaacctctaaatctttcctaacagtttctcttatagtttttct 52561730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 4379997 - 4379937
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||||||||  |||||  ||| || |||||||||||||||| |||||    
T  4379997 tctctaatgttgtcatttctaatcatatcttttctagtcttaccacacatccaacacaaca 4379937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 9509511 - 9509451
Alignment:
Q  27 tctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||||  || || ||||||| ||||||||| ||||| ||||||||| |||||||    
T  9509511 tctaactcattaggctgtaaatctttcctaatagtttatcttatagtttttctaggtcttc 9509451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 10272443 - 10272391
Alignment:
Q  35 attaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||| |||||||| ||||||||||||||||||| |  |||||| |||||||    
T  10272443 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttc 10272391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 29128967 - 29128919
Alignment:
Q  36 ttaatctctagatctttcttaatagtttctcttacagtttttcttggtc 84  Q
    |||| ||||| ||||||| ||||||||||||||| ||||||||| ||||    
T  29128967 ttaacctctaaatctttcctaatagtttctcttatagtttttctaggtc 29128919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 31274483 - 31274519
Alignment:
Q  20 atttctatctaactcattaatctctagatctttctta 56  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  31274483 atttcaatctaactcataaatctctagatctttctta 31274519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 40920827 - 40920887
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||  ||| ||||||||| |||||||||||  | ||||||||||||||| ||||||    
T  40920827 tctctaatattgtaatttctaatcctatctcgtctaatcttaccacacatccaatgcaaca 40920887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 43375690 - 43375722
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtt 62  Q
    |||||||||||||||| ||||||||||||||||    
T  43375690 aactcattaatctctaaatctttcttaatagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 48431601 - 48431677
Alignment:
Q  136 ttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
    |||||||| ||||||||  ||||||   ||||||||||||| ||||||  ||| ||| ||||||| |||||||||||    
T  48431601 ttactacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactata 48431677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 52442615 - 52442699
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgact 109  Q
    |||| ||||||||||  |||||||| ||||| ||||||||||||| | || |||| ||||||| |||  |||||  |||||||||    
T  52442615 tatccaactcattaacatctagatccttcttgatagtttctcttatatttgttctaggtcttcctctacctctagagatttgact 52442699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 4011278 - 4011193
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||| |||||| ||||    
T  4011278 tatccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctctgtctctagcgatttaacta 4011193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 35643688 - 35643766
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||| |||||    
T  35643688 atttcgatccaactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctctgcctcta 35643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 38178345 - 38178433
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||| ||||||||||| ||||| ||||| |||||||||||||||| ||||||||| ||||||| |||  ||||| ||||||||||||    
T  38178345 tctatccaactcattaatgtctaggtctttgttaatagtttctcttatagtttttctaggtcttcctctacctctagcgatttgactat 38178433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 10079989 - 10080078
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgact 109  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||| |||  |||||  |||||||||    
T  10079989 atttctatccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtcttcctctacctctagtgatttgact 10080078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 32043582 - 32043522
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  32043582 tctctaatgttgtcatttctaattctatcccgtctagtcttaccacacatccaacgcaaca 32043522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 79227 - 79168
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  79227 atttctatccagctcattaatctctagatctttcttaatagtttctcttatagtgtttct 79168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 23023421 - 23023358
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||    
T  23023421 ctatccaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttc 23023358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 16351568 - 16351510
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttct 88  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||||    
T  16351568 aactcattaatctctagatccttcttaatagtttctctaatagtttttctaggtcttct 16351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 17491746 - 17491803
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||    
T  17491746 aactcattaatctccaagtctttcttaatagtttctcttacagtttttctaggtcttc 17491803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 39388983 - 39388918
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctc-ttacagtttttcttggtc 84  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||    
T  39388983 atttctatccaactcattaatctctagatctttcctaatagtttctctttatagtttttctaggtc 39388918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 39967591 - 39967640
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  39967591 aactcattaatcgctagatctttcttaatagtttctcttatagtttttct 39967640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 45512587 - 45512668
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||||||||||| |  |||||| ||||||||||||||| ||||||||| ||||||| |||| |||||  |||||||||||    
T  45512587 aactcattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgactat 45512668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 11733947 - 11733899
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctt 68  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  11733947 atttctatctaactcattaatctctagatttttctttatagtttctctt 11733899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 38391986 - 38392050
Alignment:
Q  31 actcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtct 95  Q
    |||||||||||| ||||||||||||||| ||||||| || ||||||||| ||||||| |||||||    
T  38391986 actcattaatctgtagatctttcttaatggtttctcatatagtttttctaggtcttcctctgtct 38392050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 10109010 - 10108947
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||||  |||||||| ||||||    
T  10109010 tctatcaaactcgttaatctctagatctttcttattagtttctcttatggtttttctaggtctt 10108947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 30783124 - 30783215
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||  ||||| || | ||||| |||| |||||  ||| |||||||    
T  30783124 atttcgatccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgatctgactat 30783215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 16705947 - 16705869
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||| ||| ||||||||||||||||| | |||||||||||||||||||||| | ||| | ||||||| | ||||||||    
T  16705947 atttcgatccaactcattaatctctagctttttcttaatagtttctcttacaatatttttaggtcttcctttgtctcta 16705869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 5908836 - 5908768
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||||||  | ||||||| |||||||||||||||| ||||||||| ||||||| | ||||||||    
T  5908836 aactcattaatccttggatcttttttaatagtttctcttatagtttttctaggtcttcctatgtctcta 5908768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 16917383 - 16917292
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    ||||||||| |||||||||||||||| ||||| ||| |||||||| | || || |||||| |||||||||||  || ||  |||||||||||    
T  16917383 atttctatccaactcattaatctctaaatcttccttgatagtttcacctatagcttttctaggtcttcttctacctgtagtgatttgactat 16917292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 24399871 - 24399930
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||| ||| |||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  24399871 atttcaatccaactcattaatctcgagatccttcttaatagtttctcttataatttttct 24399930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 24558671 - 24558616
Alignment:
Q  32 ctcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||| ||||||||||||| |||||||||  |||||||| |||||||    
T  24558671 ctcattaatctctaaatctttcttaataatttctcttattgtttttctcggtcttc 24558616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 43733407 - 43733340
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| |||| |||||||||||||||||||| ||||  ||||||||||||  ||||||||| |||||||    
T  43733407 atttttatccaactcattaatctctagatccttctcgatagtttctcttgtagtttttctaggtcttc 43733340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 9070175 - 9070121
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||||| || ||||||||| ||||| ||||||||| |||||||    
T  9070175 tcattaatctctagatctatcataatagtttttcttatagtttttctaggtcttc 9070121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 30456502 - 30456575
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    |||||||||  |||||||||||||||||| | | |||| |||||||||||||||||||||| ||  |||||||||    
T  30456502 tctctaatgtcgtcatttctaattctatcccat-tggtcttaccacacatccaacgcaacatcctcatctctgct 30456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 44681329 - 44681387
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaa 294  Q
    ||||||||| |||||||||||||  |||||||||| || ||||||||||||||| ||||    
T  44681329 tctctaatgttgtcatttctaatcttatctcgtctagtcttaccacacatccaatgcaa 44681387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 9999506 - 9999430
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctct 97  Q
    ||||||||| ||||||| ||||||| |||||||||||||| || |||| |||||||| || | ||||| |||||||||    
T  9999506 atttctatcaaactcatcaatctct-gatctttcttaataattcctctcacagttttcctagttcttcctctgtctct 9999430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 16994536 - 16994593
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||| ||||||||| ||| |||||||||||||||| || ||||||||| |||||||    
T  16994536 aactcaataatctctaaatcattcttaatagtttctcatatagtttttctaggtcttc 16994593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 24739933 - 24739994
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtc 84  Q
    |||||| |||| ||||||||||| |||||||| |||||||||||||| | ||||||| ||||    
T  24739933 tctatccaactgattaatctctacatctttctcaatagtttctcttataatttttctaggtc 24739994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 28169582 - 28169525
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||| | ||||||| ||||||||||||||| ||||||| | |||||||    
T  28169582 aactcattaatctcaaaatctttcctaatagtttctcttatagtttttttaggtcttc 28169525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 30198358 - 30198407
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||||||||    
T  30198358 aactcattaatctcaatatctttcttaataatttctcttatagtttttct 30198407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 35914693 - 35914774
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||||||||||  |  |||||| ||||||||||||||| |||||||||  |||||| ||||||||||  ||| |||||||    
T  35914693 aactcattaatcttcaagtctttcctaatagtttctcttatagtttttctatgtcttcctctgtctctagggatctgactat 35914774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 38483051 - 38483092
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagt 61  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  38483051 atttctatccaactcattaatctctagatctttctgaatagt 38483092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 10080195 - 10080255
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||||||||  |||||||||| || |||||| ||| |||||||||||    
T  10080195 tctctaatgttgtcatttctaatcttatctcgtctagtcttaccaaacacccaacgcaaca 10080255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 16252927 - 16252867
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||||||||| |||||| |||  | |||||||||||||||| |||||    
T  16252927 tctctaatgttgtcatttctaattttatctcatctaatcttaccacacatccaacacaaca 16252867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 16351382 - 16351322
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||||||| |||||  ||||| || |||||||| |||||||||||||    
T  16351382 tctctaatgttgtcatttctaactctattccgtctagtcttaccacatatccaacgcaaca 16351322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 29520652 - 29520592
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| | ||||||||||| ||||| | ||| || ||||||||||||||||||||||    
T  29520652 tctctaatggtatcatttctaatcctatcccatctagtcttaccacacatccaacgcaaca 29520592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 30559883 - 30559815
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||||||||||||| ||||||| | ||||||||||||| ||||||| |  |||||| ||| ||||||    
T  30559883 aactcattaatctctaaatctttcctgatagtttctcttatagtttttttaagtcttcatctatctcta 30559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 3645275 - 3645232
Alignment:
Q  31 actcattaatctctagatctttcttaatagtttctcttacagtt 74  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||    
T  3645275 actcattaatctctaggtctttcttaacagtttctcttatagtt 3645232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 7531736 - 7531791
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||| ||||||||||| ||| |||||||||||| || ||||||||| |||||    
T  7531736 aactcatttatctctagatccttcctaatagtttctcgtatagtttttctaggtct 7531791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 2518691 - 2518741
Alignment:
Q  246 tgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||||||| ||||||| ||| || ||||||||||||||| ||||||    
T  2518691 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaaca 2518741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 9904977 - 9905031
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||| |||| |||||| |||||||||||||||  ||||||||| |||||||    
T  9904977 tcattaatttctaaatctttattaatagtttctcttgtagtttttctaggtcttc 9905031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 12692323 - 12692398
Alignment:
Q  21 tttctatctaactcattaatctctagatctttcttaa----tagtttctcttacagtttttcttggtcttcttctg 92  Q
    |||||||||||| |  |||||||||| ||||||||||    |||||||||||||||||||||| | ||||| ||||    
T  12692323 tttctatctaacccggtaatctctaggtctttcttaatagttagtttctcttacagtttttctagctcttcctctg 12692398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 14459088 - 14459046
Alignment:
Q  27 tctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||||||||||| | ||||||| |||||||||||||||    
T  14459088 tctaactcattaatctccaaatctttcctaatagtttctctta 14459046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 290
Target Start/End: Complemental strand, 16705754 - 16705700
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaac 290  Q
    ||||||||| ||||||||||||||||||| | ||| || |||||||||| |||||    
T  16705754 tctctaatgttgtcatttctaattctatcccatctagtcttaccacacaaccaac 16705700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 23492234 - 23492145
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||| |||||||||||| ||| |||||||| | |||||||||| | || |||||| ||||||| ||| | ||||  ||||||||||    
T  23492234 atttctatccaactcattaatcgctacatctttctgagtagtttctctaatag-ttttctaggtcttcctctatatctagtgatttgacta 23492145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 27037835 - 27037769
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    ||||||||| ||||||||||||| || ||||||| ||||||||| || || |||||| || ||||||    
T  27037835 atttctatccaactcattaatctttatatctttcctaatagtttatcgtatagttttactaggtctt 27037769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 33666655 - 33666693
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagt 61  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  33666655 tctatcaaactcattaatctctaggtctttcttaatagt 33666693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 36395240 - 36395314
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  36395240 tctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 36395314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 39953353 - 39953411
Alignment:
Q  27 tctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||  |||||| || |||||    
T  39953353 tctaactcatttatctctagatccttcctaatagtttctcttttagttttcctaggtct 39953411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 3079691 - 3079740
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtt 74  Q
    |||| ||||||| |||| | ||||||||||||||||||||||||| ||||    
T  3079691 tatccaactcatcaatccccagatctttcttaatagtttctcttatagtt 3079740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 13589669 - 13589620
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||| || ||||||  ||||||||||||||| |||||||||    
T  13589669 aactcattaatctttaaatcttttctaatagtttctcttatagtttttct 13589620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 16971846 - 16971895
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||| || ||| |||||||| |||||||||| |||||||||    
T  16971846 aactcattaatctttatatccttcttaatcgtttctcttatagtttttct 16971895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 29520839 - 29520790
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||||||| ||| ||| ||| ||||||||||| |||||||||    
T  29520839 aactcattaatctctaaatcgttcctaacagtttctcttatagtttttct 29520790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 32931151 - 32931070
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    ||||||||||| || | ||||||| ||||||||||||| | ||||||| | ||||||| |||| |||||  ||| |||||||    
T  32931151 aactcattaatttcaaaatctttcctaatagtttctctgatagtttttttaggtcttcctctgcctctagtgatatgactat 32931070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 35362742 - 35362823
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    ||||||||||| || | ||||||| ||||||||||||  | ||||||||| ||||||| |||| || ||  |||||||||||    
T  35362742 aactcattaatttccaaatctttcctaatagtttctccgatagtttttctaggtcttcctctgcctatagggatttgactat 35362823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 37826487 - 37826401
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||| |||||  |||||||||||||||    |||||||||||||| ||||| ||| ||||| | |||| |||||  ||||||||||    
T  37826487 atttctatccaactcgctaatctctagatctt----aatagtttctcttatagtttatctaggtctccctctgcctctagtgatttgacta 37826401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 5127379 - 5127411
Alignment:
Q  47 atctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||||||||||||| |||||||||    
T  5127379 atctttcttaatagtttctcttatagtttttct 5127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 13171939 - 13171999
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||  ||||||||||||| ||||| ||||| || |||| |||||||||| ||||||    
T  13171939 tctctaatcttgtcatttctaatcctatcccgtctagtcttactacacatccaatgcaaca 13171999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 13986482 - 13986434
Alignment:
Q  240 taatgatgtcatttctaattctatctcgtctggtgttaccacacatcca 288  Q
    ||||||||||||| |||||| |||||||||| || ||||||| ||||||    
T  13986482 taatgatgtcattcctaattatatctcgtctagtattaccactcatcca 13986434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 36069635 - 36069575
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||| ||||||||  |||| ||||| || |||||||||||||||| |||||    
T  36069635 tctctaatgttgtcgtttctaatcttatcccgtctagtcttaccacacatccaacacaaca 36069575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 36316301 - 36316345
Alignment:
Q  246 tgtcatttctaattctatctcgtctggtgttaccacacatccaac 290  Q
    |||||||||||||||||| || | |||| ||||||||||||||||    
T  36316301 tgtcatttctaattctatttcttttggtcttaccacacatccaac 36316345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 41444549 - 41444597
Alignment:
Q  164 tacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
    |||||| |||||| ||||||| ||||||| ||||||| |||||||||||    
T  41444549 tacatgtccaaaccacctaaacctagtttccaccatcttttctactata 41444597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 44175302 - 44175262
Alignment:
Q  30 aactcattaatctctagatctttctt-aatagtttctctta 69  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  44175302 aactcatcaatctctagatctttcttaaatagtttctctta 44175262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 9e-24; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 296
Target Start/End: Complemental strand, 38435153 - 38434883
Alignment:
Q  19 aatttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcat 118  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||||||||  ||||||||| ||||| | |||| |||||  ||| |||||||  | |||    
T  38435153 aatttcgatccaacacattaatctctagatctttcttaatagtttctcttgtagtttttctaggtctacctctgcctctagtgatctgactatcctccat 38435054  T
Q  119 ccgatcaattctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaa-tctagttttcaccatcgtttctactataaatgt 217  Q
      |||| | |||    ||||||| |  |||||||  ||||||   ||||||||||||| ||| ||| |||||||| ||||||| |||||||||||  ||     
T  38435053 atgatctactct---ccttactaaagcatctacaagtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgc 38434957  T
Q  218 tacccaaaatctcgctattctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||| || ||||     ||||||||| |||||||||||||  | |||||||| || ||||||| ||||||| ||||||    
T  38434956 taccccaattctc-----tctctaatgttgtcatttctaatcttctctcgtctagttttaccacgcatccaatgcaaca 38434883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 19235066 - 19235155
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgact 109  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| ||| ||||||  |||||||||    
T  19235066 atttctatccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctctatctctagtgatttgact 19235155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 33287621 - 33287554
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  33287621 atttcgatctaactcattaatttctagatctttcttaatagtttctcttatagtttttctaggtcttc 33287554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 26784422 - 26784512
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||  |||| |||||  ||||||||||    
T  26784422 atttctattcaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctttctctgcctctagtgatttgacta 26784512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 12026087 - 12026153
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||    
T  12026087 atttctatcaaactcattaatctctagatctttcttaatagtttctcctatagtttctctaggtctt 12026153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 296
Target Start/End: Original strand, 9556461 - 9556718
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatccgatcaattc 129  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||||||||  ||||||| | || |||||    |||||||||  | |||| |||  | |     
T  9556461 aactcattaatcactagatctttcttaatagtttatcttatagtttttcaaggtcttcctttgcctctagtagtttgactatcctccatctgatatactt 9556560  T
Q  130 tacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatct 229  Q
    |   |||||||||| ||||||| | ||||||   |||||||| |||| ||||||  ||| ||| ||||||  |||||||||||| |||||||| || | |    
T  9556561 t---tcttactacagaatctacttgtcttctctctacatgcctaaaccacctaagcctattttccaccat-ttttctactataagtgttaccccaacttt 9556656  T
Q  230 cgctattctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |     ||||||||| |||||||||||||  |||| |||||  | |||||||||||||||| |||||    
T  9556657 c-----tctctaatgttgtcatttctaatcatatcccgtctaatcttaccacacatccaacacaaca 9556718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 37481699 - 37481766
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| |||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  37481699 atttttatccaactcatttatcgctagatctttcttaatagtttctctaatagtttttcttggtcttc 37481766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 31254488 - 31254430
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttc 78  Q
    ||||||||  ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  31254488 atttctattcaactcattaatctctagatctttcttaatagtttaacttacagtttttc 31254430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 8197623 - 8197671
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctt 68  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  8197623 atttctatccaactcattaatctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 8202383 - 8202431
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctt 68  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  8202383 atttctatccaactcattaatctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 1626385 - 1626346
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1626385 aactcattaatctctagatctttcttaatagtttctctta 1626346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 18188952 - 18188893
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||||| | |||||||    
T  18188952 atttctatccagctcattaatctctagatctttctgaatagtttctcttataatttttct 18188893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 43832293 - 43832226
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctg 92  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||||| | | ||||||| ||||    
T  43832293 tatccaactcattaatctctagatccttcttaatagtttctcttatagtttgtttaggtcttcctctg 43832226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 19024378 - 19024329
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||||    
T  19024378 atttatatccaactcattaatctttagatctttcttaatagtttctctta 19024329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 26670958 - 26670901
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||| | |||||||    
T  26670958 aactcattaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttc 26670901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 29548719 - 29548776
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||||||||| |||||||    
T  29548719 atttctatcaaacacattaatctctaaatctttcttaataatttctcttatagttttt 29548776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 33504405 - 33504364
Alignment:
Q  38 aatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  33504405 aatctctagatctttcttaatagtttctcttatagtttttct 33504364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 37470215 - 37470272
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    ||||| ||| ||||||||||||||||||||| || ||||||||||||||| |||||||    
T  37470215 atttcgatccaactcattaatctctagatctgtcctaatagtttctcttatagttttt 37470272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 42149742 - 42149791
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  42149742 atttctatccagctcaataatctctagatctttcttaatagtttctctta 42149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 19855661 - 19855585
Alignment:
Q  21 tttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctct 97  Q
    |||||||| | |||||||| |||| |||||||||||||||||||| ||| ||||| ||| ||||||| |||| ||||    
T  19855661 tttctatccagctcattaacctctggatctttcttaatagtttcttttatagtttatctaggtcttcctctgcctct 19855585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 45640617 - 45640673
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    |||| ||||||||||||||||||||||||||||||||||| || |||| | ||||||    
T  45640617 aacttattaatctctagatctttcttaatagtttctcttaaagcttttttgggtctt 45640673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 23915787 - 23915830
Alignment:
Q  32 ctcattaatctctagatctttcttaatagtttctcttacagttt 75  Q
    ||||||||||||||||| |||||||||||||||||||| |||||    
T  23915787 ctcattaatctctagatttttcttaatagtttctcttatagttt 23915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 38860368 - 38860329
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  38860368 aactcatgaatctctagatctttcttaatagtttctctta 38860329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 42543425 - 42543370
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||| ||||||||||| ||| ||||||||||||||| ||||||||| |||||    
T  42543425 aactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtct 42543370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 44437813 - 44437868
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||| ||||||||||| |||||||||||||||| || ||||||||| |||||    
T  44437813 aactcatttatctctagatccttcttaatagtttctcatatagtttttctaggtct 44437868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 45077727 - 45077680
Alignment:
Q  249 catttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||    
T  45077727 catttctaattctatctagtctagtcttaccacacatccaacgcaaca 45077680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 33625290 - 33625349
Alignment:
Q  30 aactcattaatctctagatctttcttaatag----tttctcttacagtttttcttggtct 85  Q
    ||||||||||||||||||| |||||||||||    ||||||||||||||||||| |||||    
T  33625290 aactcattaatctctagatatttcttaatagtttctttctcttacagtttttctaggtct 33625349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 7431981 - 7432030
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||||||||||| ||||||||||||||||  | |||||||||    
T  7431981 aactcattaatctctagatccttcttaatagtttctccaatagtttttct 7432030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 11006902 - 11006853
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtt 74  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||| ||||    
T  11006902 tatccaacccattaatctctaggtctttcttaatagtttctcttatagtt 11006853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 42092713 - 42092652
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    ||||| |||| ||||||||||| |||||| ||||||||||||| || ||||||||| |||||    
T  42092713 ctatccaactaattaatctctacatcttttttaatagtttctcctatagtttttctaggtct 42092652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 4598854 - 4598914
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||||||||  |||||||  ||||||||| ||||| || ||||||||||||||||||||||    
T  4598854 tctctaatgtcgtcattttgaattctatcccgtctagtcttaccacacatccaacgcaaca 4598914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 9647813 - 9647880
Alignment:
Q  145 aatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
    ||||||||  |||||||  |||||| |||||| ||||||| ||||||| ||||||| |||||||||||    
T  9647813 aatctacaggtcttctttttacatgtccaaaccacctaaagctagtttccaccatcatttctactata 9647880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 12489894 - 12489949
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||| ||||||||||| ||| |||||||||||| || ||||||||| |||||    
T  12489894 aactcatttatctctagatccttcctaatagtttctcatatagtttttctaggtct 12489949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 37452308 - 37452375
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||| || ||||||||||||||||  ||||||||||||| | |||||| | ||||||| |||||||    
T  37452308 atttctgtccaactcattaatctctaattctttcttaatagctcctcttataatttttctaggtcttc 37452375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 41779202 - 41779241
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  41779202 aactcattaatctctagatcttttttaataatttctctta 41779241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 7825350 - 7825276
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||  |||||||||||||  ||||  |||| || |||||||||||||||||||||| ||  |||||||||    
T  7825350 tctctaatagtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgct 7825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 41022481 - 41022523
Alignment:
Q  26 atctaactcattaatctctagatctttcttaatagtttctctt 68  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||    
T  41022481 atctgactcattaatctctagatcattcttaacagtttctctt 41022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 44415812 - 44415782
Alignment:
Q  38 aatctctagatctttcttaatagtttctctt 68  Q
    |||||||||||||||||||||||||||||||    
T  44415812 aatctctagatctttcttaatagtttctctt 44415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 12443184 - 12443135
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||| ||| |||||||||||||||| || | ||||||||||||||||||    
T  12443184 atttcgatccaactcattaatctctaaatatatcttaatagtttctctta 12443135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 13149521 - 13149476
Alignment:
Q  31 actcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    ||||||||| ||||| ||||||| ||||||||||||||| ||||||    
T  13149521 actcattaacctctaaatctttcataatagtttctcttatagtttt 13149476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 13240855 - 13240888
Alignment:
Q  30 aactcattaatctctagatctttcttaatagttt 63  Q
    ||||| ||||||||||||||||||||||||||||    
T  13240855 aactcgttaatctctagatctttcttaatagttt 13240888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 14398043 - 14398076
Alignment:
Q  30 aactcattaatctctagatctttcttaatagttt 63  Q
    |||||||||||| |||||||||||||||||||||    
T  14398043 aactcattaatcactagatctttcttaatagttt 14398076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 18959101 - 18959020
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||||||||||| |  |||||| | ||||||||||||  ||||||||| ||||||| |||| |||| | ||| |||||||    
T  18959101 aactcattaatctccaagtctttccttatagtttctcttgtagtttttctaggtcttcctctgcctctgatgatctgactat 18959020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 19336975 - 19337020
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttct 65  Q
    ||||| ||| |||||||||||||||| ||||||||| |||||||||    
T  19336975 atttcgatccaactcattaatctctaaatctttctttatagtttct 19337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 23714455 - 23714532
Alignment:
Q  135 cttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
    |||||||||||||| |||  ||||||   |||||||| |||| || ||| |||||||| ||||||| |||||||||||    
T  23714455 cttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactata 23714532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 24102127 - 24102204
Alignment:
Q  135 cttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
    |||||||||||||| |||  ||||||   |||||||| |||| || ||| |||||||| ||||||| |||||||||||    
T  24102127 cttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactata 24102204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 43752039 - 43752096
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||| || | ||||||| ||||||||||||| | ||||||||| |||||||    
T  43752039 aactcattaatttccaaatctttcctaatagtttctctgatagtttttctaggtcttc 43752096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 3305896 - 3305948
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    |||| ||||| ||||||||||||| |||||| |||||||||| || |||||||    
T  3305896 tatccaactcgttaatctctagatatttctttatagtttctcgtatagttttt 3305948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 12734693 - 12734641
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatcca 288  Q
    ||||||||| ||||||||||||| ||||| ||||| || ||||||| ||||||    
T  12734693 tctctaatggtgtcatttctaatcctatcccgtctagtcttaccactcatcca 12734641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 13240939 - 13241011
Alignment:
Q  135 cttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttcta 207  Q
    ||||||| | ||||||||| ||||||   ||||||||||||| ||||||  ||||||| ||||||| ||||||    
T  13240939 cttactaaagaatctacatgtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 32402700 - 32402668
Alignment:
Q  20 atttctatctaactcattaatctctagatcttt 52  Q
    ||||||||| |||||||||||||||||||||||    
T  32402700 atttctatccaactcattaatctctagatcttt 32402668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 38429876 - 38429816
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| ||||||||||||||    
T  38429876 tctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaaca 38429816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 210
Target Start/End: Complemental strand, 21200748 - 21200561
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatc 119  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||| ||| | ||||||||| ||||||| |||  | |||  |||||||||| | | |||     
T  21200748 atttctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtcttcctctccccctagtgatttgactactctccatg 21200649  T
Q  120 cgatcaattctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctacta 210  Q
     |||| | |||    |||||| || ||||||||| ||||||   ||||||||||||| |||||| |||||||| ||||||| |||||||||    
T  21200648 tgatctactct---ccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctacta 21200561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 40982093 - 40982006
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    |||||| ||| ||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| | ||||||||  ||||||||||    
T  40982093 tctatccaacacattaatatctagatctttcttaatagttactcttatagtttttctaggtcttcctttgtctctagtgatttgacta 40982006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 36820069 - 36820118
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36820069 aactcattaatctctagatctttcttaatagtttctcttatagtttttct 36820118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 46431764 - 46431820
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  46431764 tctatccaactcattaatctctagatcttttttaatagtttctcttatagtttttct 46431820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 2340810 - 2340865
Alignment:
Q  31 actcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  2340810 actcattaatctctagatctttcttaatagtttctcttatagttttcctaggtctt 2340865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 11581634 - 11581576
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttct 88  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  11581634 aactcatttatctatagatctttcttaatagtttctcttatagtttttctaggtcttct 11581576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 36820249 - 36820323
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    |||||||||  |||||||||||| ||||||||||| || |||||||||||||||||||||| || ||||| ||||    
T  36820249 tctctaatgtcgtcatttctaatcctatctcgtctagtcttaccacacatccaacgcaacaaccttatctttgct 36820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 37598256 - 37598328
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctct 97  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  37598256 ctatccaactcattaatctctagatatatcttaatagtttctctta-agtttttctaggtcatcttctgcctct 37598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 39600773 - 39600830
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  39600773 aactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttc 39600830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 29475886 - 29475810
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||| ||| |||||||||||||||||||||||||||||||||  ||||| || |||||| ||||||| |||| |||||    
T  29475886 atttcaatccaactcattaatctctagatctttcttaatagtt--tcttatagcttttctaggtcttcctctgcctcta 29475810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 33700381 - 33700334
Alignment:
Q  22 ttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  33700381 ttctatctaactcattaatctctagatatttcttaatagcttctctta 33700334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 43308759 - 43308696
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    |||||| |||| |||||||||||||| |||||||||||||||||||  ||||||||| ||||||    
T  43308759 tctatccaactgattaatctctagatttttcttaatagtttctcttgtagtttttctaggtctt 43308696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 41452827 - 41452881
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||| ||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  41452827 tatccaactcattaatctctagatctttcttaatagtttaacttatagtttttct 41452881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 42026618 - 42026696
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||||||||||||||||||| ||| |||  |||||||||||||||||| || |||  ||||||||| |||| |||||    
T  42026618 atttctatctaactcattaatccctatatcaatcttaatagtttctcttatagctttgattggtcttcctctgcctcta 42026696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 44443290 - 44443376
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||| ||||||| |||||||||||| ||||||| ||||||||||| ||||||||| || |||| | ||||| ||| ||||| ||||    
T  44443290 ctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctaggccttcatatgtctataatgatttaacta 44443376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 19676173 - 19676230
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||| ||||| || |||| ||||||||||||||||||||||||| |||||||    
T  19676173 aactcattaacctctaaatttttcctaatagtttctcttacagtttttctaggtcttc 19676230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 20262423 - 20262504
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||||| ||||||||||||||||| |||| || ||||| ||||||| ||||||||| |||| |||||  | |||||||||    
T  20262423 aactcattgatctctagatctttcttgatagattatcttatagtttttattggtcttcctctgcctctagtgctttgactat 20262504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 21427669 - 21427731
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||| |||||||  |||||||| |||||||||||||||||||||| | |||||||||||||||    
T  21427669 tctatccaactcat--atctctaggtctttcttaatagtttctcttataatttttcttggtcttc 21427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 40116560 - 40116617
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||| |||| || ||||||||||||||| ||||||||| |||||||    
T  40116560 aactcattaatctctaaatctatcctaatagtttctcttatagtttttctaggtcttc 40116617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 55244478 - 55244410
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctt-acagtttttcttggtcttc 87  Q
    ||||||||| ||||||||||||||||||| |||||||| | |||||||| | ||||||||| |||||||    
T  55244478 atttctatccaactcattaatctctagatttttcttaagaatttctcttaagagtttttctaggtcttc 55244410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 31261051 - 31261114
Alignment:
Q  47 atctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||| ||||||||||||| ||||||||| ||||||| |||| |||||  ||||||||||    
T  31261051 atctttcttgatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgacta 31261114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 33307304 - 33307257
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    ||||||||||||||||||||||||||||| ||||| |||| |||||||    
T  33307304 aactcattaatctctagatctttcttaatggtttcccttatagttttt 33307257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 37351595 - 37351540
Alignment:
Q  32 ctcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||||||||||| || |||||||| | ||||||||| |||||||    
T  37351595 ctcattaatctctagatctttcttgattgtttctctaatagtttttctaggtcttc 37351540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 45289183 - 45289229
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  45289183 aactcattaatctctaaatctttcctaatagtttctcttatagtttt 45289229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 46568108 - 46568034
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||||||||||| |||| |||| || ||| |||||||||||| ||||| ||  |||||||||    
T  46568108 tctctaatgttgtcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcctcatctctgct 46568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 54279012 - 54278938
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| |||||||||||| |||| || |||||||  ||||||||||||| ||  |||||||||    
T  54279012 tctctaatggtgtcattcctaattctatcttgtctagtcttaccacttatccaacgcaacatcctcatctctgct 54278938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 54365064 - 54365134
Alignment:
Q  27 tctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctct 97  Q
    |||||| |||||||||| |  |||||| ||||||||||||||| ||||||||| ||||||| |||| ||||    
T  54365064 tctaacacattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctctgcctct 54365134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 7278653 - 7278600
Alignment:
Q  26 atctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||| |||| ||||||||||||||| ||| ||||||||||| |||||||||    
T  7278653 atctaacccattgatctctagatctttcgtaacagtttctcttatagtttttct 7278600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 19162679 - 19162736
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||| ||||||| ||||||||||||||| || ||| || |||||||    
T  19162679 aactcattaatctctaaatctttcctaatagtttctcttatagatttcctaggtcttc 19162736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 26990403 - 26990346
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||| ||||||||||| ||||| ||||||||||| | ||||||||| |||||||    
T  26990403 aactcattgatctctagatccttcttgatagtttctctaatagtttttctaggtcttc 26990346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 27893279 - 27893222
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||||||||| || || |||||||||||||||| ||| ||||| |||||||    
T  27893279 aactcattaatctctaggtcctttttaatagtttctcttatagtctttctaggtcttc 27893222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 36304156 - 36304123
Alignment:
Q  30 aactcattaatctctagatctttcttaatagttt 63  Q
    ||||||||||||||||||||||||||||||||||    
T  36304156 aactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 44133926 - 44133975
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||| ||||| ||||||||||| ||||||| ||||||||||||||||||    
T  44133926 atttcgatctatctcattaatctttagatctatcttaatagtttctctta 44133975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 45728133 - 45728064
Alignment:
Q  241 aatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    |||||||||||||||||| |||| |||||| || ||||||| |||||| ||||||| ||  |||||||||    
T  45728133 aatgatgtcatttctaatcctatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgct 45728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 49841816 - 49841767
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||| ||| ||||||||||||| ||||||||| ||||||||||||||||    
T  49841816 atttcgatccaactcattaatctttagatctttgttaatagtttctctta 49841767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 50960729 - 50960786
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||| | ||||| ||||||||||||||| | ||||||| |||||||    
T  50960729 aactcattaatctctaaacctttcctaatagtttctcttaaattttttctaggtcttc 50960786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 2341004 - 2341064
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| | |||||||||||||||||  |||| || ||||||||||||||| ||||||    
T  2341004 tctctaatgttttcatttctaattctatcatgtctagtcttaccacacatccaatgcaaca 2341064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 33755434 - 33755502
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||||||||||  | |||| ||||||||||||||| ||||||||| ||| ||| |||| |||||    
T  33755434 aactcattaatctctaagtttttcctaatagtttctcttatagtttttctaggttttcctctgcctcta 33755502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 45236848 - 45236788
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||||||||  ||||  |||| || ||||||||||||||||||||||    
T  45236848 tctctaatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaaca 45236788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 37534284 - 37534330
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctc 66  Q
    ||||| ||| || ||||||||||| ||||||||||||||||||||||    
T  37534284 atttcaatcaaattcattaatctcaagatctttcttaatagtttctc 37534330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 45493775 - 45493829
Alignment:
Q  21 tttctatctaactcattaatctctagatctttcttaatagtttctcttacagttt 75  Q
    |||||||| | |||||||| |||| |||||||||||||||||||| ||| |||||    
T  45493775 tttctatccagctcattaacctctggatctttcttaatagtttcttttatagttt 45493829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 51447999 - 51448073
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  51447999 tctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 51448073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 52138792 - 52138718
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  52138792 tctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 52138718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 52678942 - 52679001
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttct 91  Q
    |||||||||| ||||| ||||||| ||||||||||||||  |||||| || |||||||||||    
T  52678942 aactcattaacctctaaatctttcataatagtttctctt--agttttcctaggtcttcttct 52679001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 37228123 - 37228062
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    |||||||||||||||| ||||  ||||||||||||||||| ||||  |||||| | ||||||    
T  37228123 tatctaactcattaatttctaagtctttcttaatagtttcccttatcgtttttataggtctt 37228062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 41087934 - 41087877
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||| ||| ||||||||| ||||| ||| ||||||||  |||||||    
T  41087934 aactcattaatctctaaatccttcttaataatttcttttatagtttttccaggtcttc 41087877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 41842605 - 41842654
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||| |||||||||||||| |||||||||| |||| ||||||| |||||    
T  41842605 atttcaatctaactcattaacctctagatctatctttatagtttttctta 41842654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 45486947 - 45487000
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||| ||||||    
T  45486947 tcattaatctcaaagtctttcataatagtttctcttatagtttttctaggtctt 45487000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 49042126 - 49042081
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagttt 75  Q
    |||||||||| ||||| ||||||| ||||||||||||||| |||||    
T  49042126 aactcattaacctctaaatctttcctaatagtttctcttatagttt 49042081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 6988099 - 6988063
Alignment:
Q  22 ttctatctaactcattaatctctagatctttcttaat 58  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  6988099 ttctatccaactcattaatctctagatcttttttaat 6988063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 28245429 - 28245369
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||||||||||| ||||| |||||  | || || ||||||| ||||||||||||||    
T  28245429 tctctaatgatgtcattcctaatcctatccaggctagtcttaccactcatccaacgcaaca 28245369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 38054627 - 38054687
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| | ||||||||||| ||||| ||||| || ||||||| ||| ||||||||||    
T  38054627 tctctaatgttatcatttctaatcctatcccgtctagtcttaccacccattcaacgcaaca 38054687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 47804755 - 47804791
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctc 66  Q
    |||||||||||||||| |||||||||||| |||||||    
T  47804755 aactcattaatctctaaatctttcttaatcgtttctc 47804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 269
Target Start/End: Original strand, 7359342 - 7359582
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatc 119  Q
    ||||| ||| |||| |||||||||||||| ||||| ||||||||||||||  |||||||| ||  ||| |||| |||||  ||| |||||||  | ||||    
T  7359342 atttcgatccaacttattaatctctagatttttctaaatagtttctcttatggtttttctaggctttcctctgcctctagtgatatgactatcctccatc 7359441  T
Q  120 cgatcaattctacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgtta 219  Q
     |||| | |||    ||||||||| ||||||||||||||||   |||||| |||||| ||||||| ||| ||| ||||||  |||||||||||  |||||    
T  7359442 tgatctactct---ccttactacagaatctacatatcttctctctacatg-ccaaaccacctaaacctattttccaccatattttctactataggtgtta 7359537  T
Q  220 cccaaaatctcgctattctctaatgatgtcatttctaattctatctcgtc 269  Q
    ||  || ||||     |||||||   ||||||||||||||||||||||||    
T  7359538 cctgaactctc-----tctctaacattgtcatttctaattctatctcgtc 7359582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 27998637 - 27998574
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||    
T  27998637 ctatctaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttc 27998574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 12576942 - 12577020
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||  |||||||||||||||||||||||||||||||||| ||||  ||||||||| ||||||| |||| |||||    
T  12576942 atttctattcaactcattaatctctagatctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctcta 12577020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 210
Target Start/End: Complemental strand, 42199476 - 42199299
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatccgatcaattc 129  Q
    ||||||||||| ||||||||||||| |||||||| ||| | ||||||||| ||||||  |||  | |||  |||||||||| | | |||  |||| | ||    
T  42199476 aactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgatctactc 42199377  T
Q  130 tacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctacta 210  Q
    | |   |||||||| ||||||||| ||||||   ||||||||||||| |||||| |||||||| ||||||| |||||||||    
T  42199376 tcc---ttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctacta 42199299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 14749507 - 14749418
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgact 109  Q
    ||||||||| ||||| |||||||||||||| ||||| ||||||||||||| ||||||||| ||||||| |||| || ||  |||||||||    
T  14749507 atttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtcttcctctgcctttagtgatttgact 14749418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 2713134 - 2713055
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgact 109  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||||  ||| |||||  |||||||||    
T  2713134 aactcattcatctctagatccttcttaatagtttctcttatagtttttctaggtcttcccctgactctagtgatttgact 2713055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 295
Target Start/End: Complemental strand, 14667961 - 14667690
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatccgatcaattc 129  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||  |||  ||| |||||  ||| | |||||  | |||| |||| | ||    
T  14667961 aactcattaatctctagatctttcttagtagcttctcttatagtttttctaggatttccgctgcctctagtgatataactataatccatctgatctactc 14667862  T
Q  130 tacatcttactacataatctacatatcttcttcatacatgcccaaa--------caacctaaatctagttttcaccatcgtttctactataaatgttacc 221  Q
    | |   |||||||||||| ||||| ||||||   ||||||||||||        | |||||| |||| ||| ||||||| |||||||||||  || ||||    
T  14667861 tcc---ttactacataatgtacatgtcttctctctacatgcccaaagccccaaaccacctaagtctattttccaccatcttttctactataggtgctacc 14667765  T
Q  222 caaaatctcgctat-tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaac 295  Q
    | || |||| || | ||||||||  ||||||||||||||||| ||| ||| || ||| |||||||||||| ||||    
T  14667764 ccaactctctctctctctctaatattgtcatttctaattctacctcatctagtcttatcacacatccaacacaac 14667690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 38684680 - 38684613
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||  ||||||||| |||||||    
T  38684680 atttctatccaactaattaatctctagatctttcttaaaagtttctcttgtagtttttctaggtcttc 38684613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 18698994 - 18698904
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||| |||||| ||||||||||||||||||| |||  |||||||| ||||||||| ||| ||| |||| |||||  ||||||||||    
T  18698994 atttctatccaactcactaatctctagatctttcttgatacattctcttatagtttttctaggtattcctctgcctctagtgatttgacta 18698904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 3775162 - 3775239
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgacta 110  Q
    ||||||||| |||||  |||||||||||||| ||||| ||||||||| |||||||||||| |||||  ||||||||||    
T  3775162 tcattaatccctagacttttcttaatagtttatcttatagtttttctaggtcttcttctgcctctagtgatttgacta 3775239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 30588647 - 30588570
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctct 97  Q
    ||||| ||| |||||||| ||||||||||||||||||| | ||||||||| ||||||||| ||||||| | |||||||    
T  30588647 atttcgatccaactcattcatctctagatctttcttaacaatttctcttatagtttttctaggtcttcctatgtctct 30588570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 5305608 - 5305548
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||| |||||||||||||||| |||| || ||||||||||||||||||||||    
T  5305608 tctctaatgttgttatttctaattctatcttgtctagtcttaccacacatccaacgcaaca 5305548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 9917535 - 9917623
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    |||||| |||||||| ||||||| |||||||| |||||||||||| | ||||||||| |||| || |||||||||   |||||||||||    
T  9917535 tctatccaactcattgatctctatatctttctaaatagtttctctaatagtttttctaggtcatcctctgtctcttgtgatttgactat 9917623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 5303644 - 5303585
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||| |||||||||| ||||| |||||| | ||||||||||||||||||||||||    
T  5303644 atttctatccaactcattaaactctaaatctttttcaatagtttctcttacagtttttct 5303585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 7678678 - 7678587
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||  ||||| || | ||||| |||| |||||  ||| |||||||    
T  7678678 atttcgatccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgatctgactat 7678587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 9235235 - 9235171
Alignment:
Q  32 ctcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||| |||| |||||    
T  9235235 ctcattaatctctatatctttcttaatagtttctctt--agtttttctaggtcttcctctgcctcta 9235171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 43475439 - 43475381
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||| ||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  43475439 atttcgatccaactcattaatctctggatctttcttaatagtttctctta-agtttttct 43475381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 11002711 - 11002785
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||||||||||||||| | ||| || |||||||||||||| ||||||| ||  |||||||||    
T  11002711 tctctaatgttgtcatttctaattctatcccatctcgtcttaccacacatccagcgcaacatcctcatctctgct 11002785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 28186860 - 28186906
Alignment:
Q  23 tctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||    
T  28186860 tctatccaactcattaatctctaaatctttcttaatagtttctctta 28186906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 42199593 - 42199527
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||| ||| | ||||||||| ||||||    
T  42199593 atttctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctt 42199527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 33667625 - 33667568
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||||||||| |||||||||  |||||||| ||||||||| |||||||    
T  33667625 aactcattaatctctagatccttcttaataacttctcttatagtttttctaggtcttc 33667568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 10082837 - 10082893
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||||| ||||||    
T  10082837 aactcattaatctctagatccttgttactagtttctcttatagtttttctaggtctt 10082893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 37918232 - 37918160
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctg 92  Q
    ||||| ||| |||||||||||||||| |||||||| || |||||||||||||| |||||| || |||| ||||    
T  37918232 atttcaatccaactcattaatctctatatctttctaaacagtttctcttacaggttttctaggccttcctctg 37918160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 3775257 - 3775316
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttctt 89  Q
    |||||||||||| ||||  |||||||| |||||||||||| ||||||||| |||||||||    
T  3775257 aactcattaatcgctagtcctttcttagtagtttctcttatagtttttctaggtcttctt 3775316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 4460407 - 4460349
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||| ||| |||||||||    
T  4460407 atttctatccaactcattaatctctaggtctttcttaatagtctctttta-agtttttct 4460349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 6368220 - 6368275
Alignment:
Q  241 aatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||| |||||||||||||||||||||||||  | |||||||||||| |||||||||    
T  6368220 aatgttgtcatttctaattctatctcgtctattcttaccacacatctaacgcaaca 6368275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 28005731 - 28005692
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagttt 63  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  28005731 ctatcaaactcattaatctctagatctttcttaatagttt 28005692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 29922468 - 29922425
Alignment:
Q  36 ttaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  29922468 ttaatctctaaatctttcttaatagtttctcttatagtttttct 29922425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 39322148 - 39322191
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagttt 63  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  39322148 atttctatccaactcattaatctttagatctttcttaatagttt 39322191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 1287879 - 1287953
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||||||||||| ||||| |||||  |||| || ||||||| |||||||||||||| ||  |||||||||    
T  1287879 tctctaatgatgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 1287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 2066192 - 2066130
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| ||||||||||||||||||||||| ||| |||||||| ||| | ||||||| |||||||    
T  2066192 tatccaactcattaatctctagatcttttttagtagtttcttttataatttttctaggtcttc 2066130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 28072 - 28015
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| ||||| ||||| ||||||| ||||||||||||||| ||||||||| |||||||    
T  28072 aacttattaacctctaaatctttcctaatagtttctcttatagtttttctaggtcttc 28015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 6889183 - 6889134
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||| ||||||||||| ||||||| ||||||||||||||| |||||||||    
T  6889183 aactaattaatctctaaatctttcctaatagtttctcttatagtttttct 6889134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 15489587 - 15489652
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||||||||| ||  ||||||||||||||||||||||  |||||||| ||||||| |||| |||||    
T  15489587 tcattaatctataagtctttcttaatagtttctcttattgtttttctaggtcttcctctgcctcta 15489652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 9235061 - 9235001
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||| |||| ||||| ||||| || ||||||||||||||| ||||||    
T  9235061 tctctaatgttgtcatttataatcctatcccgtctagtcttaccacacatccaatgcaaca 9235001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 17213267 - 17213215
Alignment:
Q  27 tctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||||||||||||| || |||||||||| ||||  |||||||||    
T  17213267 tctaactcattaatctctagatccttgttaatagtttttcttctagtttttct 17213215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 21952339 - 21952283
Alignment:
Q  240 taatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||| |||||||||||||  |||||||||| || ||||||||||| ||||||||||    
T  21952339 taatgctgtcatttctaatcttatctcgtctagtcttaccacacatgcaacgcaaca 21952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 32516550 - 32516490
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| |||||||||||| ||||||  |||| || |||||||||||||||| |||||    
T  32516550 tctctaatgttgtcatttctaagtctatcctgtctagtcttaccacacatccaacacaaca 32516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 683982 - 684033
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatcc 287  Q
    ||||||||  ||||||||||||||||||||| ||| || |||||||||||||    
T  683982 tctctaatattgtcatttctaattctatctcatctagtcttaccacacatcc 684033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 285
Target Start/End: Original strand, 8492623 - 8492662
Alignment:
Q  246 tgtcatttctaattctatctcgtctggtgttaccacacat 285  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  8492623 tgtcatttctaattatatctcgtctggtcttaccacacat 8492662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 11675719 - 11675672
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    |||||||||||||||| |||| || ||||||||||||||| |||||||    
T  11675719 aactcattaatctctaaatctgtcctaatagtttctcttatagttttt 11675672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 15369889 - 15369944
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtct 85  Q
    |||||||| |||| ||||| |||||||||||||||||||| | ||||||| |||||    
T  15369889 aactcatttatctttagatttttcttaatagtttctcttatactttttctaggtct 15369944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 31636143 - 31636261
Alignment:
Q  164 tacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatctcgctattctctaatgatgtcatttctaattctat 263  Q
    ||||||||||||| |||||| ||||||||  |||||| |||||||||||  || ||||| || |       |||||||||| |||||||| |||||||||    
T  31636143 tacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaact-------ttctctaatgctgtcatttataattctat 31636235  T
Q  264 ctcgtctggtgttaccacacatccaa 289  Q
    |  |||| || |||||||| ||||||    
T  31636236 ccagtctagtcttaccacaaatccaa 31636261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 2075764 - 2075838
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaacagccgtatctctgct 310  Q
    ||||||||| ||||||| ||||| |||||| |||| || |||| || |||||||||||||| ||  |||||||||    
T  2075764 tctctaatgttgtcattcctaatcctatcttgtctagtcttacaactcatccaacgcaacatcctcatctctgct 2075838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 6859564 - 6859514
Alignment:
Q  37 taatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||| || ||||||| ||||||||||||||| ||||||||| |||||||    
T  6859564 taatctgtaaatctttcctaatagtttctcttatagtttttctaggtcttc 6859514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 11753199 - 11753145
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||  |||||||| || || |||||||||||||||||||| |||||||||    
T  11753199 tatctaacctattaatctttatatatttcttaatagtttctcttatagtttttct 11753145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 40938082 - 40938032
Alignment:
Q  61 tttctcttacagtttttcttggtcttcttctgtctctaacgatttgactat 111  Q
    ||||||||| | ||||||| ||||||| |||| ||||||||||||||||||    
T  40938082 tttctcttatattttttctaggtcttcctctgcctctaacgatttgactat 40938032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 1174679 - 1174642
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctct 67  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  1174679 aactcattaatctctagatccttcttaatagattctct 1174642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 21093769 - 21093708
Alignment:
Q  235 ttctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||||||||  ||||||||||||||| ||| | ||| || ||||||||||| ||||||||||    
T  21093769 ttctctaatattgtcatttctaattccatcacatctagtcttaccacacatacaacgcaaca 21093708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 28676789 - 28676724
Alignment:
Q  26 atctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttct 91  Q
    ||||||||| ||||| ||||  |||||| |||| |||||||||| ||||||| | |||||||||||    
T  28676789 atctaactcgttaatatctaattctttcataattgtttctcttatagtttttataggtcttcttct 28676724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 8492423 - 8492477
Alignment:
Q  28 ctaactcattaatctctagatctttcttaa---tagtttctcttacagtttttct 79  Q
    |||||||||||||||||||||| |||||||   ||||||| |||| |||||||||    
T  8492423 ctaactcattaatctctagatccttcttaatactagtttcccttatagtttttct 8492477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 24391089 - 24391117
Alignment:
Q  39 atctctagatctttcttaatagtttctct 67  Q
    |||||||||||||||||||||||||||||    
T  24391089 atctctagatctttcttaatagtttctct 24391117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 28186958 - 28187018
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||| ||||||||||||| ||| |  |||| || ||||||||||||||| ||||||    
T  28186958 tctctaatgttgtcatttctaatcctaccatgtctagtcttaccacacatccaatgcaaca 28187018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 33667275 - 33667227
Alignment:
Q  164 tacatgcccaaacaacctaaatctagttttcaccatcgtttctactata 212  Q
    ||||||||||||| |||||| ||||||||  |||||| |||||||||||    
T  33667275 tacatgcccaaaccacctaagtctagtttctaccatcttttctactata 33667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 34587 - 34665
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||| ||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||||||| |||| |||||    
T  34587 atttcaatccaactcattaatctttagatctttcttaatggtttctcttatagtttttctaggtcttcctctgcctcta 34665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 296
Target Start/End: Original strand, 9593800 - 9594062
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgactattgtgcatccgatcaattc 129  Q
    ||||||||||||||||  |||||| ||||||||||||||| | ||||||| ||||||| |||  ||||   ||||||||| |  | |||| |||| | ||    
T  9593800 aactcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctct--tgatttgactctcctccatctgatctactc 9593897  T
Q  130 tacatcttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatct 229  Q
    |   ||||||||||  |||||||| ||||||   ||||||||||||| ||||||  ||| |||  |||||| |||||||||    || ||||| || ||     
T  9593898 t---tcttactacagcatctacatgtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatggtgctaccccaactcc 9593994  T
Q  230 cgctat-tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    | || | ||||||||| ||||||| ||||| ||||| ||||| || ||||||| ||||||||||||||    
T  9593995 ctctctctctctaatggtgtcattcctaatcctatcccgtctagtcttaccactcatccaacgcaaca 9594062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 10617326 - 10617405
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttgact 109  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||||| ||| |||||||  |||||  |||||||||    
T  10617326 aactcattaatctctagatccttcttaatggtttctcttatagtttttctaggttttcttctacctctagtgatttgact 10617405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 35199704 - 35199763
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||||||    
T  35199704 atttctatctaactcattaatctctagatctttcctaatagtttcttttataatttttct 35199763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 33997626 - 33997704
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||| |||||||||||||||||   |||||||||||||||||||| |||||| |  ||||||| |||| |||||    
T  33997626 atttctatccaactcattaatctctaggcttttcttaatagtttctcttatagttttccaaggtcttcctctgcctcta 33997704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 1747728 - 1747801
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    |||| |||||||||||||||||||| ||||||  |||||||||||  |||||||| ||||||| |||| |||||    
T  1747728 tatccaactcattaatctctagatccttcttaccagtttctcttatggtttttctaggtcttcctctgcctcta 1747801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 6055859 - 6055920
Alignment:
Q  26 atctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||| ||||||| | |||||||    
T  6055859 atctaactcattaacctctaaatctttcataatagtttctcttaaagtttttataggtcttc 6055920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 31831951 - 31832000
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  31831951 aactcagtaatctctagatctttcttaatagtttctctgatagtttttct 31832000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 1681613 - 1681652
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctctta 69  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  1681613 aactcattaatctctagatccttcttaatagtttctctta 1681652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 6293474 - 6293533
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||| ||  |||||||||    
T  6293474 atttctatctaactcattaatatctagatatttcctaatagtttctattttagtttttct 6293533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 9568651 - 9568592
Alignment:
Q  237 ctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||||||| |||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  9568651 ctctaatgttgtcatttataattctatcatgtctagtcttaccacacatccaacgcaaca 9568592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 31818721 - 31818663
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttct 88  Q
    |||||||||||||| | | ||||| ||||||||||||||| ||||||||| ||||||||    
T  31818721 aactcattaatctccaaacctttcctaatagtttctcttatagtttttctaggtcttct 31818663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 38953 - 38904
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||| ||||||||||| ||| ||||||||||||||| |||||||||    
T  38953 aactcatttatctctagatccttcctaatagtttctcttatagtttttct 38904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 8364746 - 8364689
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 87  Q
    |||| |||||| |||| ||||||||||||||||||||||| ||||||| | |||||||    
T  8364746 aacttattaatttctaaatctttcttaatagtttctcttatagtttttttaggtcttc 8364689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 293
Target Start/End: Complemental strand, 33084117 - 33083993
Alignment:
Q  164 tacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaaaatctcgctattctctaatgatgtcatttctaattctat 263  Q
    ||||| ||||||| |||||| ||||||||  |||||| ||||||| |||  || ||||| || ||||     ||||||||   |||||||||||||||||    
T  33084117 tacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctaccccaactctc-----tctctaatatcgtcatttctaattctat 33084023  T
Q  264 ctcgtctggtgttaccacacatccaacgca 293  Q
    | | ||| || |||||||||||||||||||    
T  33084022 cccatctagtcttaccacacatccaacgca 33083993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 579601 - 579561
Alignment:
Q  37 taatctctagatctttcttaatagtttctcttacagttttt 77  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  579601 taatttctatatctttcttaatagtttctcttacagttttt 579561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 1748027 - 1748083
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    ||||||||| |||||||||||||||| || ||||||| |||||||||| | ||||||    
T  1748027 atttctatccaactcattaatctctaaatttttcttagtagtttctctaatagtttt 1748083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 7080527 - 7080483
Alignment:
Q  33 tcattaatctctagatctttcttaatagtttctcttacagttttt 77  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||    
T  7080527 tcattaatctttagatctttcttgatagtttctcttatagttttt 7080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 10617526 - 10617574
Alignment:
Q  246 tgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaa 294  Q
    |||||||||||||||||| |||||| || ||| ||||||||||||||||    
T  10617526 tgtcatttctaattctatttcgtctagtcttaacacacatccaacgcaa 10617574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 33998294 - 33998354
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||||||||  |||||||||||| ||||| | ||| || ||||||||||||||||||||||    
T  33998294 tctctaatgtagtcatttctaatcctatcacatctagtcttaccacacatccaacgcaaca 33998354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 43144 - 43183
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  43144 aactcattactctctagatctttattaatagtttctctta 43183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 14389249 - 14389299
Alignment:
Q  26 atctaactcattaatctctagatctttcttaatagtttctcttacagtttt 76  Q
    |||||||| ||||||||||| ||||||||||| ||||||| | ||||||||    
T  14389249 atctaacttattaatctctaaatctttcttaagagtttctgtgacagtttt 14389299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 2079428 - 2079339
Alignment:
Q  135 cttactacataatctacatatcttcttcatacatgcccaaacaacctaaatctagttttcaccatcgtttctactataaatgttacccaa 224  Q
    |||||||||||||||||| |||||||   ||||| || |||| || |||  ||| ||| ||||||| ||||||||||| ||| |||||||    
T  2079428 cttactacataatctacaaatcttctctctacatacctaaaccacttaagcctattttccaccatcttttctactatagatgctacccaa 2079339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 7513264 - 7513333
Alignment:
Q  227 tctcgctattctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    |||| ||| |||||| || ||||||||| |||  |||||| ||| || ||||||||||||||||||||||    
T  7513264 tctctctagtctctattgctgtcatttcaaatcttatctcatctagtcttaccacacatccaacgcaaca 7513333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 12134191 - 12134251
Alignment:
Q  236 tctctaatgatgtcatttctaattctatctcgtctggtgttaccacacatccaacgcaaca 296  Q
    ||||||||  |||||||||||||||||| || ||| || || ||||||||||||| |||||    
T  12134191 tctctaatattgtcatttctaattctatatcatcttgtcttgccacacatccaacacaaca 12134251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 178512 - 178568
Alignment:
Q  30 aactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtctt 86  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  178512 aactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctt 178568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 11986 - 11919
Alignment:
Q  31 actcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctcta 98  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||| || |||||    
T  11986 actcattaatctctagatccttcttaatagtttctcttatagtttttctagttcttcttttgcctcta 11919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 66733 - 66658
Alignment:
Q  24 ctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaa 99  Q
    |||||||||||||||||||||||||||||||||||| ||| | ||| | ||||||| ||||||| |||| ||||||    
T  66733 ctatctaactcattaatctctagatctttcttaataattttttttataatttttctaggtcttcctctgcctctaa 66658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 2383 - 2432
Alignment:
Q  20 atttctatctaactcattaatctctagatctttcttaatagtttctctta 69  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  2383 atttctatcaaactcattaatctctagatctttcttaatagtctctctta 2432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1259 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1259
Description:

Target: scaffold1259; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 1607 - 1670
Alignment:
Q  26 atctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttctt 89  Q
    |||||||||||||| || || ||||||  ||||||||||||||| ||||||||| |||| ||||    
T  1607 atctaactcattaacctttaaatcttttctaatagtttctcttatagtttttctaggtcctctt 1670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 17734 - 17679
Alignment:
Q  25 tatctaactcattaatctctagatctttcttaatagtttctcttacagtttttctt 80  Q
    |||| ||| |||||||||||| |||||| |||||||||||||||| | ||||||||    
T  17734 tatccaacccattaatctctaaatcttttttaatagtttctcttatattttttctt 17679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1609
Description:

Target: scaffold1609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 1054 - 1099
Alignment:
Q  39 atctctagatctttcttaatagtttctcttacagtttttcttggtc 84  Q
    |||| |||||| ||| ||||||||||||||||||||||||| ||||    
T  1054 atctatagatccttcctaatagtttctcttacagtttttctaggtc 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 346870 - 346914
Alignment:
Q  35 attaatctctagatctttcttaatagtttctcttacagtttttct 79  Q
    |||||||||||||||||| |||||||||| ||||  |||||||||    
T  346870 attaatctctagatcttttttaatagtttatcttgtagtttttct 346914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University