View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2329_low_44 (Length: 264)

Name: NF2329_low_44
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2329_low_44
NF2329_low_44
[»] chr8 (32 HSPs)
chr8 (1-242)||(16383238-16383475)
chr8 (1-99)||(34307216-34307314)
chr8 (1-99)||(24307795-24307893)
chr8 (1-99)||(30479476-30479574)
chr8 (1-99)||(16056403-16056501)
chr8 (1-99)||(32032725-32032822)
chr8 (22-99)||(24307629-24307706)
chr8 (1-99)||(15048184-15048281)
chr8 (34-92)||(37038486-37038544)
chr8 (1-92)||(12831054-12831145)
chr8 (1-92)||(14547929-14548020)
chr8 (1-92)||(15197340-15197431)
chr8 (1-92)||(40423945-40424036)
chr8 (34-92)||(504156-504214)
chr8 (34-92)||(1179975-1180033)
chr8 (1-97)||(10621089-10621185)
chr8 (1-92)||(4854865-4854956)
chr8 (34-77)||(5957852-5957895)
chr8 (4-55)||(32708010-32708061)
chr8 (34-92)||(23122632-23122690)
chr8 (34-92)||(34012331-34012389)
chr8 (29-99)||(38229429-38229498)
chr8 (1-99)||(43414583-43414681)
chr8 (31-99)||(14055624-14055692)
chr8 (1-99)||(10284633-10284731)
chr8 (34-92)||(44507122-44507180)
chr8 (1-77)||(8841434-8841510)
chr8 (31-99)||(17443825-17443893)
chr8 (29-92)||(20074964-20075027)
chr8 (29-99)||(15258959-15259029)
chr8 (34-92)||(42221522-42221580)
chr8 (28-92)||(35181638-35181701)
[»] chr6 (20 HSPs)
chr6 (1-99)||(15508026-15508124)
chr6 (1-99)||(15990044-15990142)
chr6 (1-99)||(30341362-30341460)
chr6 (1-99)||(4231548-4231646)
chr6 (1-92)||(32869685-32869776)
chr6 (34-92)||(28536521-28536579)
chr6 (1-99)||(31976248-31976346)
chr6 (1-92)||(22880660-22880751)
chr6 (30-77)||(31953061-31953108)
chr6 (1-92)||(17598561-17598652)
chr6 (34-92)||(29857834-29857892)
chr6 (34-83)||(31109435-31109484)
chr6 (34-77)||(11427640-11427683)
chr6 (37-92)||(6209503-6209558)
chr6 (1-99)||(31110763-31110859)
chr6 (34-92)||(15832584-15832642)
chr6 (34-92)||(23128162-23128220)
chr6 (25-58)||(12732523-12732556)
chr6 (34-94)||(946381-946441)
chr6 (28-92)||(9379741-9379805)
[»] chr5 (28 HSPs)
chr5 (1-99)||(3921267-3921365)
chr5 (1-99)||(2252170-2252268)
chr5 (1-99)||(39688899-39688997)
chr5 (1-99)||(28177775-28177873)
chr5 (10-99)||(6679698-6679787)
chr5 (1-92)||(18520886-18520977)
chr5 (1-92)||(42414304-42414395)
chr5 (34-92)||(2740281-2740339)
chr5 (1-99)||(26720516-26720614)
chr5 (1-99)||(26990265-26990363)
chr5 (34-92)||(35785206-35785264)
chr5 (34-92)||(36732977-36733035)
chr5 (34-99)||(35943927-35943992)
chr5 (3-99)||(15409614-15409710)
chr5 (40-92)||(36875644-36875696)
chr5 (1-92)||(13811659-13811750)
chr5 (1-92)||(40145414-40145505)
chr5 (34-92)||(14831821-14831879)
chr5 (34-92)||(33149673-33149731)
chr5 (127-232)||(6081619-6081724)
chr5 (127-242)||(2704441-2704557)
chr5 (127-186)||(27677938-27677997)
chr5 (34-77)||(33825359-33825402)
chr5 (36-92)||(10356641-10356698)
chr5 (1-77)||(16327923-16327999)
chr5 (30-73)||(10227925-10227968)
chr5 (34-99)||(31008988-31009053)
chr5 (28-73)||(32473328-32473372)
[»] chr1 (29 HSPs)
chr1 (1-99)||(50591002-50591100)
chr1 (1-99)||(5959002-5959100)
chr1 (1-99)||(41608495-41608593)
chr1 (34-92)||(38595161-38595219)
chr1 (1-99)||(47748443-47748540)
chr1 (34-92)||(3000326-3000384)
chr1 (1-99)||(32813247-32813345)
chr1 (1-92)||(2581922-2582013)
chr1 (34-92)||(9474911-9474969)
chr1 (34-92)||(51898718-51898776)
chr1 (29-98)||(44453980-44454049)
chr1 (29-92)||(37649205-37649268)
chr1 (34-92)||(8346423-8346481)
chr1 (1-92)||(44548378-44548469)
chr1 (10-77)||(45044571-45044638)
chr1 (1-92)||(48716284-48716375)
chr1 (34-92)||(27564770-27564828)
chr1 (1-99)||(37926440-37926538)
chr1 (1-59)||(44332373-44332431)
chr1 (38-92)||(47452359-47452413)
chr1 (1-92)||(38632323-38632414)
chr1 (1-92)||(41758812-41758903)
chr1 (1-99)||(26440734-26440832)
chr1 (1-99)||(49811529-49811627)
chr1 (28-92)||(23597120-23597184)
chr1 (28-92)||(44112799-44112862)
chr1 (34-77)||(11152413-11152456)
chr1 (1-92)||(50630465-50630556)
chr1 (29-77)||(6260892-6260940)
[»] chr7 (37 HSPs)
chr7 (1-99)||(22343361-22343459)
chr7 (1-99)||(41915741-41915839)
chr7 (1-99)||(32564428-32564526)
chr7 (1-99)||(38044197-38044295)
chr7 (1-99)||(8238212-8238311)
chr7 (1-99)||(40846115-40846213)
chr7 (1-99)||(7727906-7728004)
chr7 (9-99)||(46374812-46374902)
chr7 (1-98)||(35522877-35522974)
chr7 (1-92)||(7389396-7389487)
chr7 (34-92)||(36361948-36362006)
chr7 (1-92)||(8080385-8080476)
chr7 (28-99)||(18207180-18207251)
chr7 (1-92)||(38267047-38267138)
chr7 (28-99)||(39255952-39256023)
chr7 (34-92)||(3434569-3434627)
chr7 (34-92)||(3784002-3784060)
chr7 (34-92)||(10343598-10343656)
chr7 (34-92)||(19329849-19329907)
chr7 (9-99)||(21234401-21234491)
chr7 (38-92)||(35137540-35137594)
chr7 (29-99)||(36208173-36208243)
chr7 (34-92)||(36362033-36362091)
chr7 (36-92)||(4999551-4999607)
chr7 (29-76)||(2318273-2318320)
chr7 (1-92)||(38837224-38837315)
chr7 (34-92)||(19436222-19436280)
chr7 (9-99)||(26296644-26296734)
chr7 (34-92)||(40957714-40957772)
chr7 (29-99)||(41423682-41423752)
chr7 (28-73)||(43317565-43317609)
chr7 (29-77)||(46033831-46033879)
chr7 (1-92)||(3694374-3694465)
chr7 (28-65)||(27744338-27744375)
chr7 (28-73)||(38160513-38160557)
chr7 (29-69)||(16374854-16374894)
chr7 (43-99)||(31735884-31735940)
[»] chr4 (33 HSPs)
chr4 (1-99)||(19670718-19670816)
chr4 (1-99)||(47986208-47986306)
chr4 (1-99)||(32766958-32767056)
chr4 (1-99)||(50813894-50813992)
chr4 (1-77)||(17983745-17983821)
chr4 (1-99)||(29547961-29548059)
chr4 (1-99)||(55475191-55475289)
chr4 (1-99)||(55079715-55079814)
chr4 (1-99)||(18924497-18924595)
chr4 (1-91)||(29589742-29589831)
chr4 (1-99)||(8343165-8343263)
chr4 (1-99)||(44536748-44536845)
chr4 (31-92)||(6034051-6034112)
chr4 (29-92)||(50526201-50526264)
chr4 (34-92)||(3481661-3481719)
chr4 (1-92)||(11511464-11511555)
chr4 (1-76)||(29977908-29977983)
chr4 (1-92)||(48183051-48183142)
chr4 (1-92)||(50052430-50052521)
chr4 (34-92)||(480482-480540)
chr4 (1-99)||(31910192-31910290)
chr4 (1-99)||(40574779-40574877)
chr4 (1-92)||(41236354-41236445)
chr4 (1-92)||(42044369-42044460)
chr4 (1-92)||(54473535-54473626)
chr4 (38-92)||(29239893-29239947)
chr4 (1-92)||(29234247-29234338)
chr4 (29-67)||(18769077-18769115)
chr4 (34-92)||(23608242-23608300)
chr4 (34-83)||(24995142-24995191)
chr4 (31-91)||(28480300-28480360)
chr4 (31-91)||(28481175-28481235)
chr4 (31-91)||(28482050-28482110)
[»] chr2 (37 HSPs)
chr2 (1-99)||(43490121-43490219)
chr2 (1-99)||(45097737-45097835)
chr2 (1-77)||(2997489-2997565)
chr2 (1-99)||(38732354-38732452)
chr2 (1-99)||(13365351-13365451)
chr2 (1-99)||(40613904-40614002)
chr2 (29-99)||(17820034-17820104)
chr2 (1-92)||(9058487-9058578)
chr2 (29-99)||(26891534-26891604)
chr2 (1-99)||(42257193-42257291)
chr2 (1-92)||(28863462-28863553)
chr2 (127-237)||(8161735-8161845)
chr2 (28-99)||(15428769-15428840)
chr2 (1-92)||(19930822-19930913)
chr2 (1-92)||(33436102-33436193)
chr2 (1-92)||(40701485-40701576)
chr2 (34-92)||(7465770-7465828)
chr2 (34-92)||(17473027-17473085)
chr2 (9-92)||(3439986-3440069)
chr2 (1-92)||(10249384-10249475)
chr2 (1-92)||(13438350-13438441)
chr2 (1-92)||(28381657-28381748)
chr2 (1-92)||(32505650-32505741)
chr2 (34-92)||(5574523-5574581)
chr2 (34-92)||(27864711-27864769)
chr2 (34-92)||(30915470-30915528)
chr2 (1-99)||(38273144-38273242)
chr2 (1-99)||(2533124-2533221)
chr2 (34-92)||(4060692-4060750)
chr2 (34-92)||(38882849-38882906)
chr2 (1-49)||(3034985-3035033)
chr2 (9-56)||(3737986-3738033)
chr2 (34-92)||(17823791-17823849)
chr2 (34-92)||(20700822-20700880)
chr2 (34-92)||(33436218-33436276)
chr2 (9-99)||(36168836-36168926)
chr2 (33-73)||(42026896-42026935)
[»] chr3 (37 HSPs)
chr3 (120-242)||(29022824-29022946)
chr3 (1-77)||(36331331-36331407)
chr3 (1-99)||(45058555-45058652)
chr3 (127-242)||(9325446-9325561)
chr3 (1-92)||(27714893-27714984)
chr3 (1-92)||(42823118-42823209)
chr3 (1-92)||(53982018-53982109)
chr3 (34-92)||(11095388-11095446)
chr3 (9-99)||(11907371-11907461)
chr3 (30-92)||(14623870-14623932)
chr3 (1-99)||(26141534-26141632)
chr3 (29-99)||(36331408-36331478)
chr3 (34-92)||(49607421-49607479)
chr3 (34-92)||(52629307-52629365)
chr3 (1-92)||(8076400-8076491)
chr3 (9-88)||(26754706-26754785)
chr3 (1-92)||(31456696-31456787)
chr3 (1-92)||(33644207-33644298)
chr3 (1-92)||(54868897-54868988)
chr3 (34-92)||(13898090-13898148)
chr3 (34-92)||(17470412-17470470)
chr3 (10-92)||(25395344-25395426)
chr3 (1-99)||(41189766-41189864)
chr3 (1-99)||(47531865-47531963)
chr3 (34-99)||(33118886-33118951)
chr3 (1-99)||(11347924-11348022)
chr3 (1-99)||(20764917-20765015)
chr3 (29-99)||(35093585-35093655)
chr3 (1-99)||(51419362-51419460)
chr3 (9-92)||(30801743-30801826)
chr3 (1-92)||(48587093-48587184)
chr3 (34-92)||(36707459-36707517)
chr3 (33-76)||(1758490-1758535)
chr3 (9-99)||(48375716-48375806)
chr3 (28-73)||(9434246-9434290)
chr3 (28-92)||(24699983-24700047)
chr3 (29-73)||(47190960-47191003)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-86)||(152511-152596)
[»] scaffold0321 (1 HSPs)
scaffold0321 (34-99)||(10144-10209)
[»] scaffold0237 (1 HSPs)
scaffold0237 (34-92)||(4036-4094)
[»] scaffold0316 (1 HSPs)
scaffold0316 (9-76)||(17077-17144)
[»] scaffold1268 (1 HSPs)
scaffold1268 (34-92)||(964-1022)
[»] scaffold1267 (1 HSPs)
scaffold1267 (34-92)||(964-1022)


Alignment Details
Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 16383475 - 16383238
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactcn 100  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||     
T  16383475 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 16383376  T
Q  101 nnnnnnnnnnatcaagcccaaatgggatataacattaaccaaggtgtttcatctcgaacaaggcatgcaaagagaaacacccaaaacactaacaaagtca 200  Q
              |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  16383375 ttttttt---atcaagcccaaatgggatataacattaaccaaggtgtttcatttcgaacaagacatgcaaagagaaaca-ccaaagcactaacaaagtca 16383280  T
Q  201 agtcaccagtgccaaaaattggaacaccgcaaagaagaaaac 242  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  16383279 agtcaccggtgccaaaaattggaacaccgcaaagaagaaaac 16383238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34307314 - 34307216
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  34307314 aaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24307795 - 24307893
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  24307795 aaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30479476 - 30479574
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||||||||||| ||||||    
T  30479476 aaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16056403 - 16056501
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||| | |||||||||||| ||||||    
T  16056403 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32032822 - 32032725
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||||| || | ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||| |||||||||||||| ||||||    
T  32032822 aaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 24307706 - 24307629
Alignment:
Q  22 catatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||    
T  24307706 catatggccacatatcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15048184 - 15048281
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||| | || || |||||||||||||||||| |||||| |||||||||||||||||| | ||| |||||||| ||||||    
T  15048184 aaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 37038544 - 37038486
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  37038544 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatc 37038486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12831145 - 12831054
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||    
T  12831145 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatc 12831054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14548020 - 14547929
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||    
T  14548020 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15197431 - 15197340
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||||||    
T  15197431 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatc 15197340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40423945 - 40424036
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| || ||  | || |||||||||||||||||| |||||| |||||||||||||||||| ||| | ||||||||    
T  40423945 aaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatc 40424036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 504156 - 504214
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||    
T  504156 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatc 504214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 1179975 - 1180033
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||    
T  1179975 tgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatc 1180033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10621089 - 10621185
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaac 97  Q
    ||||||| |||||||||| |  || | || || ||||||||||||||||||||||||| ||||||||| |||||||| | ||| |||||||| ||||    
T  10621089 aaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4854865 - 4854956
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| ||||||| |||| ||| | ||||||| |||||||||| ||| ||||| || |||||||||||||||||| | ||| ||||||||    
T  4854865 aaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatc 4854956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 5957895 - 5957852
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  5957895 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 5957852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 32708010 - 32708061
Alignment:
Q  4 gtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgt 55  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  32708010 gtgtacttgtgcggggtccatatagccacatctcagatttttgtatgggtgt 32708061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 23122632 - 23122690
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| ||||| ||||||||    
T  23122632 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatc 23122690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 34012331 - 34012389
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||    
T  34012331 tgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatc 34012389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 38229498 - 38229429
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||||  ||||| ||||||| ||||||    
T  38229498 ccacatgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaagagtgttcatgtatcataactc 38229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43414583 - 43414681
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||| | ||| |  |||| ||| ||||||||||||||||||||| |||||| |||||| |||| | ||| |||||||| ||||||    
T  43414583 aaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 14055624 - 14055692
Alignment:
Q  31 acatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||| |||||||||||||| |||||||| |||||||| ||||||| |||||  ||||||| ||||||    
T  14055624 acatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10284633 - 10284731
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||  |  | || ||||| ||||||||||||||||||| | |||||||| ||| ||| ||||| |||||||| ||||||    
T  10284633 aaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 44507122 - 44507180
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| ||||||||    
T  44507122 tgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatc 44507180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8841434 - 8841510
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    ||||||| |||||||||||| ||  |  | || ||| ||||||||||||||||||||| ||||||| ||||||||||    
T  8841434 aaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaa 8841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 17443893 - 17443825
Alignment:
Q  31 acatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| |||| |||  |||||||| ||||||| | ||| |||||||| ||||||    
T  17443893 acatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 20074964 - 20075027
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||| ||||| |||||| |||||||||||| | |||||||||||||||| | ||| ||||||||    
T  20074964 ccacgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatc 20075027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 15258959 - 15259029
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||||||| ||||| |||| |||| |||||||||| ||||  || | |||||||| ||||||    
T  15258959 ccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 42221580 - 42221522
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||| |||  ||||||| ||||||| | ||| ||||||||    
T  42221580 tgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatc 42221522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 35181638 - 35181701
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||  |||||||||||||| ||| ||||||||||||| | |||||||  |||||||    
T  35181638 gccacatgtcaggattttgtgtgggtgt-aagaggtgtattgccacatgaaggtgtacatgtatc 35181701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15508026 - 15508124
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  15508026 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15990044 - 15990142
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  15990044 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30341362 - 30341460
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  30341362 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4231646 - 4231548
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| | |||||||| ||| ||||||    
T  4231646 aaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32869776 - 32869685
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  32869776 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 32869685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 28536521 - 28536579
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  28536521 tgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatc 28536579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31976346 - 31976248
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||| |  |||| |||||||||||||||||||||| || |||| ||||||||||||| | ||| |||||||| ||||||    
T  31976346 aaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22880660 - 22880751
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  22880660 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 22880751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 31953061 - 31953108
Alignment:
Q  30 cacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  31953061 cacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaa 31953108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17598652 - 17598561
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||||||||||  | ||||||||||||||| ||||| ||||||||    
T  17598652 aaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatc 17598561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 29857892 - 29857834
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||| ||  |||||||||||| |||||||||| ||||||||    
T  29857892 tgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatc 29857834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 31109435 - 31109484
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgt 83  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  31109435 tgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 31109484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 11427683 - 11427640
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  11427683 tgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaa 11427640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 6209503 - 6209558
Alignment:
Q  37 cagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||| |||||||   |||||||||||||||| ||||| ||||||||    
T  6209503 cagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatc 6209558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31110763 - 31110859
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||||||| |||| ||| | |  || ||||||||||||||| |  |||||| |||||||||||||||||| | ||| |||||||| ||||||    
T  31110763 aaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 15832642 - 15832584
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||| |||||||||||||||||||  | | ||||| ||||||||||||| ||||||||    
T  15832642 tgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatc 15832584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 23128162 - 23128220
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| || ||||||  ||| ||||||||| ||| ||||    
T  23128162 tgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatc 23128220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12732556 - 12732523
Alignment:
Q  25 atagccacatgtcagatttttgtgtgggtgtcaa 58  Q
    |||||||| |||||||||||||||||||||||||    
T  12732556 atagccacgtgtcagatttttgtgtgggtgtcaa 12732523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 946441 - 946381
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgt 94  Q
    ||||||||||||| || |||||||| |||||||||  ||||||| | ||| ||||||||||    
T  946441 tgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgt 946381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 9379741 - 9379805
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||| ||||| |||||||| ||||||||||||| ||||||| || |||| | ||| ||||||||    
T  9379741 gccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatc 9379805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3921267 - 3921365
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  3921267 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2252170 - 2252268
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  2252170 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39688899 - 39688997
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||| |||||||| |||||  |||||| |||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||||    
T  39688899 aaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28177873 - 28177775
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||  ||||||||||| ||| |  |||| ||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||||| ||||||    
T  28177873 aaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 6679787 - 6679698
Alignment:
Q  10 ttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||| ||| |  |||| |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||| ||||||    
T  6679787 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 18520886 - 18520977
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  18520886 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 18520977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42414304 - 42414395
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| || ||  | || ||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||    
T  42414304 aaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatc 42414395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 2740339 - 2740281
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||    
T  2740339 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatc 2740281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26720614 - 26720516
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||| | ||| | ||||| |||||||||||| ||| ||||| || |||||||||||||||||| | ||| |||||||| ||||||    
T  26720614 aaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26990363 - 26990265
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||| | ||| | ||||| |||||||||||| ||| ||||| || |||||||||||||||||| | ||| |||||||| ||||||    
T  26990363 aaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 35785264 - 35785206
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||    
T  35785264 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatc 35785206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 36732977 - 36733035
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||    
T  36732977 tgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatc 36733035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 35943927 - 35943992
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||||||||  | ||||||||||||||| ||||| |||||||| ||||||    
T  35943927 tgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 15409614 - 15409710
Alignment:
Q  3 agtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||| |||||||||||| ||| | || || ||||||||||||||||||||||||| |  ||||||| ||||||| | ||| |||||||| ||||||    
T  15409614 agtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 36875644 - 36875696
Alignment:
Q  40 atttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 36875696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13811750 - 13811659
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||||||||||  | ||||||||||||||| ||||| ||||||||    
T  13811750 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 40145505 - 40145414
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||| ||| || |||||||||||||||||| ||||| ||||||||    
T  40145505 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatc 40145414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 14831879 - 14831821
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||| |||||||||||| ||||||||||||||||||  |||| ||||||||    
T  14831879 tgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatc 14831821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 33149673 - 33149731
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||    
T  33149673 tgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatc 33149731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 6081724 - 6081619
Alignment:
Q  127 atataacattaaccaaggtgtttcatctcgaacaaggcatgcaaagagaaacacccaaaacactaacaaagtcaagtcaccagtgccaaaaattggaaca 226  Q
    ||||||||||||| || ||||||||||| | ||||| | || ||||| ||||| |||||||| | |||| ||||||||||| |||||| |||  |||||     
T  6081724 atataacattaacaaaagtgtttcatcttgtacaagacgtgtaaagaaaaacatccaaaacaattacaatgtcaagtcaccggtgccataaaaaggaacg 6081625  T
Q  227 ccgcaa 232  Q
    ||||||    
T  6081624 ccgcaa 6081619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 2704441 - 2704557
Alignment:
Q  127 atataacattaaccaaggtgtttcatctcgaacaaggcatgcaaagagaaacacccaaaac-actaacaaagtcaagtcaccagtgccaaaaattggaac 225  Q
    ||||||||||||| ||  |||||||||||||||||||| |||| | ||||||||| ||| | | | |||||||||||||||| |||||  |||   | ||    
T  2704441 atataacattaacaaatatgtttcatctcgaacaaggcgtgcacaaagaaacacctaaagcaatttacaaagtcaagtcaccggtgccgtaaagaaggac 2704540  T
Q  226 accgcaaagaagaaaac 242  Q
    ||||||| |||||||||    
T  2704541 accgcaatgaagaaaac 2704557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 27677997 - 27677938
Alignment:
Q  127 atataacattaaccaaggtgtttcatctcgaacaaggcatgcaaagagaaacacccaaaa 186  Q
    ||||||||||||| |||||| ||||||||| ||||| | ||||||||||||||| |||||    
T  27677997 atataacattaacgaaggtgattcatctcgcacaagacgtgcaaagagaaacactcaaaa 27677938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 33825359 - 33825402
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  33825359 tgtcagatttttatgtgggtgtcaaggagtgtattgccacctaa 33825402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 10356698 - 10356641
Alignment:
Q  36 tcagatttttgtgtgggtgtcaa-ggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| | ||| ||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatc 10356641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16327999 - 16327923
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    ||||||| |||||| | |||||| ||   ||| |||||||||||| |||||||||||| || |||||||||||||||    
T  16327999 aaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaa 16327923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 10227925 - 10227968
Alignment:
Q  30 cacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 73  Q
    |||||||||||||||||| | ||||||||||| |||||||||||    
T  10227925 cacatgtcagatttttgtatcggtgtcaagggatgtattgccac 10227968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 31009053 - 31008988
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||||||||||||  | |  ||||||| ||||||| | |||||||||||| ||||||    
T  31009053 tgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 32473372 - 32473328
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 73  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||    
T  32473372 gccacatgtcagaattttgtgtgggtgt-aagaggtgtattgccac 32473328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 50591002 - 50591100
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  50591002 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5959002 - 5959100
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||    
T  5959002 aaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41608495 - 41608593
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||    
T  41608495 aaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 38595219 - 38595161
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38595219 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatc 38595161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47748540 - 47748443
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||| |||||||||||| | ||||| |||||||||||||||||| | |||||||||| |||||||||||||||||| ||| |||||||||| ||||||    
T  47748540 aaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 3000384 - 3000326
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  3000384 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatc 3000326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32813345 - 32813247
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||| |  |||| |||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||| ||||||    
T  32813345 aaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2582013 - 2581922
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  2582013 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 2581922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 9474911 - 9474969
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  9474911 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 9474969  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 51898718 - 51898776
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  51898718 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatc 51898776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 44454049 - 44453980
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaact 98  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||| |||||||| |||||    
T  44454049 ccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcataact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 37649268 - 37649205
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||    
T  37649268 ccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatc 37649205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 8346423 - 8346481
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||||    
T  8346423 tgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatc 8346481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44548378 - 44548469
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||||| ||||  ||||||||||||||||||| ||| ||||||||    
T  44548378 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatc 44548469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 45044571 - 45044638
Alignment:
Q  10 ttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    ||||||||||| ||| | || ||||||||||||||||| ||||||||||  |||||||||||||||||    
T  45044571 ttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaa 45044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 48716284 - 48716375
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||||||    
T  48716284 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatc 48716375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 27564770 - 27564828
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  ||||||||||||||||| | ||| ||||||||    
T  27564770 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatc 27564828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37926440 - 37926538
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||| |||| | ||| | ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||| | | |||||||| ||||||    
T  37926440 aaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44332373 - 44332431
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaag 59  Q
    ||||| |||||||||||||| ||||  |||||||||||||||||| |||||||||||||    
T  44332373 aaagtatacttgtgcggggtccatagggccacatgtcagatttttatgtgggtgtcaag 44332431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 47452359 - 47452413
Alignment:
Q  38 agatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||    
T  47452359 agatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatc 47452413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38632323 - 38632414
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||| ||| ||  ||||||||||||||||| ||||| ||||||||    
T  38632323 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatc 38632414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41758903 - 41758812
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||  ||||||||||| ||| |  | || |||||||||||||||||| |||||| |||||||||||||  ||| ||||| ||||||||    
T  41758903 aaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatc 41758812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26440832 - 26440734
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||| |||||| | ||| | ||||| |||||||||||||||||||||| || |||||||||| || |||| | ||| ||| |||| ||||||    
T  26440832 aaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcctaactc 26440734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 49811529 - 49811627
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||||||||| ||  |||| || || |||||||||||||||||| ||||||  ||||||||| ||||||| | ||| ||| |||| ||||||    
T  49811529 aaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 23597120 - 23597184
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||| |||||||||||| ||||||| |||| | |||||||||||||||| | ||| ||||||||    
T  23597120 gccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatc 23597184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 44112799 - 44112862
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||| | |||||||  |||||||    
T  44112799 gccacatgtcagaattttgtgtgggtgt-aagaggtgtattgccacatgaaggtgtacatgtatc 44112862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 11152413 - 11152456
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    |||||||||||||||||| |||| | ||||||||||||||||||    
T  11152413 tgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa 11152456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50630556 - 50630465
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||  ||| || ||||||||||||||| ||| | ||||||||    
T  50630556 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatc 50630465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 6260940 - 6260892
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    |||||||| |||||||| |||||||||  ||||||||||| ||||||||    
T  6260940 ccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaa 6260892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22343459 - 22343361
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  22343459 aaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41915839 - 41915741
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  41915839 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32564428 - 32564526
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  32564428 aaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38044295 - 38044197
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  38044295 aaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8238311 - 8238212
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta-aaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| |||||  | |||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||||    
T  8238311 aaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40846115 - 40846213
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||| ||||||||||| |||||| | |||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||    
T  40846115 aaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7728004 - 7727906
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| |||||  ||||||||||||||||| ||||  ||||||| |||||||| |||||||| |||||||||||||| ||||||    
T  7728004 aaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

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Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 46374812 - 46374902
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||| ||| | ||||| |||||||||||||||||||||| || |||||| ||||||||||| | ||| |||||||| ||||||    
T  46374812 cttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35522974 - 35522877
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaact 98  Q
    ||||||| |||||||||| | ||||| ||||| |||||||||||||||||||||| ||  ||||||||||||| ||| | ||| |||||||| |||||    
T  35522974 aaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcataact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7389487 - 7389396
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| | |||||||||||||||| ||||| ||||||||    
T  7389487 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatc 7389396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 36361948 - 36362006
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||    
T  36361948 tgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatc 36362006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8080385 - 8080476
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||| ||| |||||||| |||||||||||||||||| ||||| ||||||||    
T  8080385 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 8080476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18207251 - 18207180
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||| ||| |||||||||| ||||||||||| ||||||||||||||||| | ||| |||||||| ||||||    
T  18207251 gccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38267138 - 38267047
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||| ||| ||| ||||| ||||||||    
T  38267138 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatc 38267047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 39255952 - 39256023
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| | ||| |||||||| ||||||    
T  39255952 gccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 3434627 - 3434569
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||| |||||||||||||||||| |||||||||||||||||| | ||| ||||||||    
T  3434627 tgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatc 3434569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 3784060 - 3784002
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  | ||||||||||||||| ||||| ||||||||    
T  3784060 tgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatc 3784002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 10343598 - 10343656
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||||  ||||||| |||||||| ||||| ||||||||    
T  10343598 tgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatc 10343656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 19329907 - 19329849
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  ||||||||||||||||| | ||| ||||||||    
T  19329907 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatc 19329849  T

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Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 21234491 - 21234401
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||| ||| | || || ||||| ||||||||||| ||||||| |||||||||| ||||||| | ||| |||||||| ||||||    
T  21234491 cttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 35137594 - 35137540
Alignment:
Q  38 agatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||    
T  35137594 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatc 35137540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 36208243 - 36208173
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||| |||||||||||||||||| |  |||||| |||||||| ||||| |||||||| ||||||    
T  36208243 ccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 36362091 - 36362033
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| || |||||| |||||||| ||||| ||||||||    
T  36362091 tgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatc 36362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 4999551 - 4999607
Alignment:
Q  36 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||  |||||||||||| |||| ||||| ||||||||    
T  4999551 tcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatc 4999607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 2318273 - 2318320
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 76  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  2318273 ccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccaccta 2318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38837315 - 38837224
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||| |||||  | |||||||||||||||||| ||||| ||||||||    
T  38837315 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatc 38837224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 19436222 - 19436280
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| | ||| ||||||||    
T  19436222 tgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatc 19436280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 26296734 - 26296644
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||| ||||| ||||| | |||||||||| ||||| ||| || |||| ||||| ||||||| | ||| |||||||| ||||||    
T  26296734 cttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 40957772 - 40957714
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||| |||| | ||||||||||||||||  |||| ||||||||    
T  40957772 tgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatc 40957714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 41423752 - 41423682
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||||  |||||||| |||||||| ||| |||| | ||| |||||||| ||||||    
T  41423752 ccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 43317565 - 43317609
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 73  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||    
T  43317565 gccacatgtcagaattttgtgtgggtgt-aaggggtgtattgccac 43317609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 46033831 - 46033879
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    |||| |||||||||||| ||||||||| || ||||||||||||||||||    
T  46033831 ccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaa 46033879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3694465 - 3694374
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||| | || ||  | || |||||||||||||||||||||| ||  ||||||||| ||||||| ||||| ||| ||||    
T  3694465 aaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatc 3694374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 27744338 - 27744375
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgt 65  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  27744338 gccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 38160557 - 38160513
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 73  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||    
T  38160557 gccacgtgtcagaattttgtgtgggtgt-aaggggtgtattgccac 38160513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 16374854 - 16374894
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattg 69  Q
    |||| |||||||||||||||||| ||||||||| |||||||    
T  16374854 ccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  43 tttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||| || | |||||||||||||||| | ||| |||||||| ||||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19670718 - 19670816
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  19670718 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47986306 - 47986208
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  47986306 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32767056 - 32766958
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  32767056 aaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 50813894 - 50813992
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||    
T  50813894 aaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17983745 - 17983821
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17983745 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 17983821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29547961 - 29548059
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||| |||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||    
T  29547961 aaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 55475289 - 55475191
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||||    
T  55475289 aaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 55079715 - 55079814
Alignment:
Q  1 aaagtgtacttgtgcgggg-tgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||| |||| | ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  55079715 aaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18924497 - 18924595
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| ||| |||||| ||| ||||||    
T  18924497 aaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29589742 - 29589831
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtat 91  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||||||||    
T  29589742 aaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8343165 - 8343263
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||| ||||| |||||||| ||||| |||||||||||||||||| ||| |||||||| || ||||||||||||||| | |||||||||||| ||||||    
T  8343165 aaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44536748 - 44536845
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||| || |||||  ||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  44536748 aaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 6034112 - 6034051
Alignment:
Q  31 acatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  6034112 acatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 6034051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 50526201 - 50526264
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  50526201 ccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatc 50526264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 3481719 - 3481661
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  3481719 tgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatc 3481661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11511464 - 11511555
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||||    
T  11511464 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 11511555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29977983 - 29977908
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 76  Q
    ||||||| |||||| ||||| |||||  | || |||||||||||||||||||||| ||||||||||||||||||||    
T  29977983 aaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 29977908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 48183051 - 48183142
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||||    
T  48183051 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatc 48183142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 50052430 - 50052521
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||    
T  50052430 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatc 50052521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 480482 - 480540
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||    
T  480482 tgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatc 480540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31910290 - 31910192
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||| | || |  ||||||||||||||||||||||||| | |||||||| ||||||| | ||| |||||||| ||||||    
T  31910290 aaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40574877 - 40574779
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||||| |||| | ||| ||||  | ||||||||||||||||||||||||| ||||||||| |||||||| | ||| |||||||| ||||||    
T  40574877 aaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41236445 - 41236354
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||||||    
T  41236445 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatc 41236354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42044369 - 42044460
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||  | || ||||||||||||||| ||||| ||||||||    
T  42044369 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatc 42044460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 54473535 - 54473626
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||| |||||||||||||||||||||  ||||||||| ||||||| ||||| ||||||||    
T  54473535 aaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatc 54473626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 29239947 - 29239893
Alignment:
Q  38 agatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||||| ||||||||    
T  29239947 agatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatc 29239893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29234247 - 29234338
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||  ||| |||| ||||||||||||| |||| ||||| ||||||||    
T  29234247 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatc 29234338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 18769077 - 18769115
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtat 67  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  18769077 ccacatgtcagatttttgtgtgggtgttagggggtgtat 18769115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 23608300 - 23608242
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||||||  ||||||||| || |||| ||||| ||| ||||    
T  23608300 tgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatc 23608242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 24995142 - 24995191
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgt 83  Q
    ||||| |||||| |||||||||||| ||||||||||||| |||| |||||    
T  24995142 tgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgt 24995191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 28480300 - 28480360
Alignment:
Q  31 acatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtat 91  Q
    |||||||||||||||||||| |||| |||  |||||||| ||||||| | ||| |||||||    
T  28480300 acatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 28481175 - 28481235
Alignment:
Q  31 acatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtat 91  Q
    |||||||||||||||||||| |||| |||  |||||||| ||||||| | ||| |||||||    
T  28481175 acatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 28482050 - 28482110
Alignment:
Q  31 acatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtat 91  Q
    |||||||||||||||||||| |||| |||  |||||||| ||||||| | ||| |||||||    
T  28482050 acatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43490219 - 43490121
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  43490219 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45097737 - 45097835
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| | |||||||||||| ||||||    
T  45097737 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2997489 - 2997565
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2997489 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 2997565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38732452 - 38732354
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||||| ||||||    
T  38732452 aaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13365451 - 13365351
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaag--gtgtttatgtatcgtaact 98  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| |||||||| |||| |  ||||||||||||| |||||    
T  13365451 aaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataact 13365352  T
Q  99 c 99  Q
    |    
T  13365351 c 13365351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40613904 - 40614002
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||| | ||||| ||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||||| ||||||    
T  40613904 aaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 17820034 - 17820104
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||    
T  17820034 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9058578 - 9058487
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| || ||  | || ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  9058578 aaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 9058487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 26891534 - 26891604
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||  |||||||| ||||||    
T  26891534 ccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42257291 - 42257193
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||| | ||||| |||||||||||| ||||||||||||  | ||||||||||||||||| ||| |||||||| ||||||    
T  42257291 aaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28863553 - 28863462
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  28863553 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 28863462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 8161735 - 8161845
Alignment:
Q  127 atataacattaaccaaggtgtttcatctcgaacaaggcatgcaaagagaaacacccaaaacactaacaaagtcaagtcaccagtgccaaaaattggaaca 226  Q
    |||||||| |||| ||||||| |||||||| ||||| | | |||||||||||||||||| |  | |||| |||||||||||||||||| ||| | |||||    
T  8161735 atataacaataacaaaggtgtctcatctcgtacaagacgtacaaagagaaacacccaaagcgattacaatgtcaagtcaccagtgccataaaatagaaca 8161834  T
Q  227 ccgcaaagaag 237  Q
    |||||| ||||    
T  8161835 ccgcaacgaag 8161845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 15428769 - 15428840
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||||||||||||||||||| |||| ||||||||||| ||||| ||| | |||||||||||| ||||||    
T  15428769 gccacatgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactc 15428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19930822 - 19930913
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||  ||||||||||| || ||  | || |||||||||||||||||| |||||| |||||||||||||||||| ||||| ||||||||    
T  19930822 aaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatc 19930913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33436102 - 33436193
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  33436102 aaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 33436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 40701576 - 40701485
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||  ||||||||||| ||  || | || |||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||    
T  40701576 aaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatc 40701485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 7465770 - 7465828
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||    
T  7465770 tgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatc 7465828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 17473085 - 17473027
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||    
T  17473085 tgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatc 17473027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 3440069 - 3439986
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||| ||  ||  ||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||| || |||||    
T  3440069 cttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatc 3439986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10249384 - 10249475
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||||||||||  ||||||||| ||||||| ||||| ||||||||    
T  10249384 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatc 10249475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13438441 - 13438350
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| || ||||||| ||||||| ||||| ||||||||    
T  13438441 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatc 13438350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28381657 - 28381748
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| ||||||||| || ||| |  | || ||||||||||||||||||||||| |  ||||||||||||||||| ||||| ||||||||    
T  28381657 aaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatc 28381748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 32505650 - 32505741
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || |||||||||||||||||||||||||  ||||||||| ||||||| ||||| ||||||||    
T  32505650 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatc 32505741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 5574523 - 5574581
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||| |||||||||||| ||||||||||||||||||  |||| ||||||||    
T  5574523 tgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatc 5574581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 27864769 - 27864711
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||| |||||| |||||||||||||| ||| ||||| ||||||||    
T  27864769 tgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatc 27864711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 30915528 - 30915470
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||| |||||| ||||| |||||||||||||||||| ||||| ||||||||    
T  30915528 tgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatc 30915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38273144 - 38273242
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| || ||||||||| ||| | || || |||||||||||||||||||||| || ||||||||||||| ||||   ||| |||||||| ||||||    
T  38273144 aaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2533221 - 2533124
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||||||||||||  || | || || |||||||||||||||| |||||||| || ||||||||||| ||| | ||| |||||||| ||||||    
T  2533221 aaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 4060750 - 4060692
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||| ||||||  ||||||||| ||||||| ||||| ||||||||    
T  4060750 tgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatc 4060692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 38882849 - 38882906
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||| |||||| |||| ||||||||||||| ||||| ||||||||    
T  38882849 tgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatc 38882906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3034985 - 3035033
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgt 49  Q
    ||||| |||||||||||||| |||||  |||||||||||||||||||||    
T  3034985 aaagtatacttgtgcggggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 3738033 - 3737986
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtc 56  Q
    |||||||||||| || ||  ||||||||||||||||||||||||||||    
T  3738033 cttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 17823849 - 17823791
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||  |||  ||||||||||||||| | ||| ||||||||    
T  17823849 tgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatc 17823791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 20700880 - 20700822
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||| || ||||| |||||||||||||| ||| | ||| ||||||||    
T  20700880 tgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatc 20700822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 33436276 - 33436218
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||| ||||||||||||  |||||||||||| |||| | ||| ||||||||    
T  33436276 tgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatc 33436218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 36168926 - 36168836
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||| ||| | ||||| ||||| ||||||||||||| || || || ||||||| || |||| | ||| |||||||| ||||||    
T  36168926 cttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 42026896 - 42026935
Alignment:
Q  33 atgtcagatttttgtgtgggtgtcaaggggtgtattgccac 73  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  42026896 atgtcagaattttgtgtgggtgt-aaggggtgtattgccac 42026935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 29022946 - 29022824
Alignment:
Q  120 aaatgggatataacattaaccaaggtgtttcatctcgaacaaggcatgcaaagagaaacacccaaaacactaacaaagtcaagtcaccagtgccaaaaat 219  Q
    ||||| |||||||||||||| || ||||| ||||| | ||||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||| ||     
T  29022946 aaatgagatataacattaacaaatgtgttccatcttgtacaaggcatgcaaagagaaacacccaaaatacttacaaagtcaagtcatcggtgccaataaa 29022847  T
Q  220 tggaacaccgcaaagaagaaaac 242  Q
    ||||||||  |||||||||||||    
T  29022846 tggaacacatcaaagaagaaaac 29022824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36331331 - 36331407
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 77  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36331331 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45058555 - 45058652
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||| |||||||||||||| ||||| | |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  45058555 aaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 9325561 - 9325446
Alignment:
Q  127 atataacattaaccaaggtgtttcatctcgaacaaggcatgcaaagagaaacacccaaaacactaacaaagtcaagtcaccagtgccaaaaattggaaca 226  Q
    ||||||||||||| | | |||||||||||| ||||||| |||||||||||||||| ||| |||| ||||||||||||||   |||||||||| | |||||    
T  9325561 atataacattaacaacgatgtttcatctcgcacaaggcgtgcaaagagaaacaccaaaagcacttacaaagtcaagtcattggtgccaaaaaatagaaca 9325462  T
Q  227 ccgcaaagaagaaaac 242  Q
    | ||||||||||||||    
T  9325461 ctgcaaagaagaaaac 9325446  T

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Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27714893 - 27714984
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| || ||  | || ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  27714893 aaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatc 27714984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42823209 - 42823118
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||| ||||| |||||||| |||||  |||||||||| |||||| |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  42823209 aaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatc 42823118  T

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Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53982109 - 53982018
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  53982109 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 53982018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 11095388 - 11095446
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  11095388 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 11095446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 11907461 - 11907371
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||| |||||  |||||||||||||||||||||| ||||  ||| |||||||| ||||||| ||||| |||||||| ||||||    
T  11907461 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 14623870 - 14623932
Alignment:
Q  30 cacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| | ||| ||||||||    
T  14623870 cacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatc 14623932  T

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Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26141534 - 26141632
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||| ||||| ||| |  |||| |||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||| ||||||    
T  26141534 aaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 36331408 - 36331478
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||| ||||||    
T  36331408 ccacatgccagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactc 36331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 49607479 - 49607421
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  49607479 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 49607421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 52629365 - 52629307
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  52629365 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 52629307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8076491 - 8076400
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  8076491 aaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatc 8076400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 26754785 - 26754706
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatg 88  Q
    |||||||||||| ||| |  ||||||||||||||||||||||| |||| | |||||||||||||||||| ||||| ||||    
T  26754785 cttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatg 26754706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31456787 - 31456696
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| || ||  | || ||||||||||||||||||||||||| |||||||||||| ||||  ||||| ||||||||    
T  31456787 aaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatc 31456696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33644298 - 33644207
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||||| |||||||||||| ||  |  | || ||||||||||||||||||||||||| ||||||||||||||| || ||||| ||||||||    
T  33644298 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatc 33644207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 54868897 - 54868988
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||  ||||||||||| ||  || | || |||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||    
T  54868897 aaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatc 54868988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 13898090 - 13898148
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||||    
T  13898090 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatc 13898148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 17470470 - 17470412
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  17470470 tgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatc 17470412  T

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Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 25395344 - 25395426
Alignment:
Q  10 ttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||| |||||  ||||||||||||||||||||||||||||||| | ||||| ||||| ||||| ||| | ||||||||||||    
T  25395344 ttgtgtggggtctatatagccacatgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatc 25395426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41189766 - 41189864
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||| | ||||| ||||| |||||| ||||||||||||  | ||||||||||||||| | ||| |||||||| ||||||    
T  41189766 aaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47531963 - 47531865
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| |||||||||||| ||||| ||||| ||||||||| |||||||| ||| ||  |||||||||||| |||| | ||| |||||||| ||||||    
T  47531963 aaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 33118886 - 33118951
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| ||||| |||||||| ||||||    
T  33118886 tgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11347924 - 11348022
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||| ||| |||| ||| | ||||| |||||||||||||||||| |||||| || ||||||| ||||||| | ||| |||||||| ||||||    
T  11347924 aaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20764917 - 20765015
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||||| |||||| ||| | ||||| |||||||||||||||||||||| || | ||||||| |||||||| | ||| ||||| || ||||||    
T  20764917 aaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 35093655 - 35093585
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||||||||| |||| ||||||  | ||||||| ||||||||| ||| |||||||||||||||    
T  35093655 ccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgtaactc 35093585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 51419362 - 51419460
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    ||||||| ||||||||||||  || | ||||| |||||||||||||||||||||| || || ||||||| || |||| | ||| |||||||| ||||||    
T  51419362 aaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 30801743 - 30801826
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||| ||||| |||||  | |||||||| |||||||||||||| |||| |||||||||  ||||||| ||||| ||||||||    
T  30801743 cttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatc 30801826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 48587093 - 48587184
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||| | ||  |  | || |||||||||||| ||| |||||||| |||||||||||||||||| ||| | ||||||||    
T  48587093 aaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatc 48587184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 36707459 - 36707517
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||| |||||| |||||||||| ||||||| ||| | ||||||||    
T  36707459 tgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatc 36707517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 1758490 - 1758535
Alignment:
Q  33 atgtcagatttttgtgtgggtgtcaa--ggggtgtattgccaccta 76  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||    
T  1758490 atgtcagatttttgtgtgggtgtcaaggggggtgtattgcaaccta 1758535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 48375716 - 48375806
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||| ||| |  ||||| ||||||||||||| ||| | |  |||||||||||| ||||||| ||||| |||| ||| ||||||    
T  48375716 cttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 9434246 - 9434290
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 73  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||    
T  9434246 gccacatgtcagaattttgtgtgggtgt-aagaggtgtattgccac 9434290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 24699983 - 24700047
Alignment:
Q  28 gccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    ||||| || ||||||||| ||||||||||||  |||||||||||| |||| | ||| ||||||||    
T  24699983 gccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatc 24700047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 47191003 - 47190960
Alignment:
Q  29 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 73  Q
    |||||||||||| |||||||||||||| || ||||||||||||||    
T  47191003 ccacatgtcagaattttgtgtgggtgt-aaagggtgtattgccac 47190960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 152596 - 152511
Alignment:
Q  1 aaagtgtacttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgttta 86  Q
    |||||||| ||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  152596 aaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgttta 152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 10144 - 10209
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatcgtaactc 99  Q
    |||||||||||| ||||| |||||| || ||||||||||||||||||||| |||||||| ||||||    
T  10144 tgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

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Target: scaffold0237 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 4094 - 4036
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||||||||||||||||||| ||  |||||||||||| |||||||||| ||||||||    
T  4094 tgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatc 4036  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 17144 - 17077
Alignment:
Q  9 cttgtgcggggtgcatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 76  Q
    |||||||||||| ||| |  ||||||||||||||||||||||| |||| |||| |||||||| |||||    
T  17144 cttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaaccta 17077  T

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Target: scaffold1268 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 964 - 1022
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||| ||||||||||| ||| || |||||||||||||||||||| ||| ||||||||    
T  964 tgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatc 1022  T

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Target: scaffold1267 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 964 - 1022
Alignment:
Q  34 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaaggtgtttatgtatc 92  Q
    |||||| ||||||||||| ||| || |||||||||||||||||||| ||| ||||||||    
T  964 tgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatc 1022  T

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