View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2329_low_6 (Length: 530)
Name: NF2329_low_6
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2329_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 150 - 512
Target Start/End: Original strand, 14176643 - 14177005
Alignment:
| Q |
150 |
attatacattctgttaatcaaaatgaacatttacattaaaaggttcgttaatattgtcatatcaatcgttcaatatctcatttattgtagtttcaatacc |
249 |
Q |
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| T |
14176643 |
attatacattctgttaatcaaaatgaacatttgcattaaaaggttcgttaatatcgtcatatcagtcgttcaatatctcacttattgtagtttcaatacc |
14176742 |
T |
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| Q |
250 |
tataaatatttactttttt--gagggaaaataaatatttacttattataatatcatatctaaaagagagttattattttgactaaccaatacataagtaa |
347 |
Q |
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| T |
14176743 |
tataaatatttacttttttttgagggacaataaatatttacttattatcatatcatat--aaaagagagttattattttgactaaccaatacataagtaa |
14176840 |
T |
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| Q |
348 |
aaaacttttatattttttgatatattgaagctcaacaaattgatcatagcgaaaaggagatctctgctcaacgtatccggtcaaggtacaacccggcata |
447 |
Q |
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| T |
14176841 |
aaaacttttaaattttttgatatattgaagctcatcaaattgatcacagcgaaaaggagatctctgctcaacgtatccggtcaaggtacaaccccgcata |
14176940 |
T |
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| Q |
448 |
cctccactagccttttaagcaatcatttttgttaaaaataagtccctgttcattgatatgccttt |
512 |
Q |
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| T |
14176941 |
cctccactagccttttaagcaatcatttttgtcaaaaataagtccctgttcatcgatataccttt |
14177005 |
T |
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