View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2329_low_61 (Length: 237)
Name: NF2329_low_61
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2329_low_61 |
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Alignment Details
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 25414082 - 25413876
Alignment:
| Q |
1 |
aaatgacaatgctttgagatagaacataatgtttggtcccttagtttgaatcttggataattacgtaacagcttttataggtggaagagggaaaattagt |
100 |
Q |
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| T |
25414082 |
aaatgaccatgctttgagatagaacataatttttggtcccttagtttgaatcttggataattacgtaacagcttttataggtggaagagggaaaattagt |
25413983 |
T |
|
| Q |
101 |
taaaacacacaccacacttgaccacactagtgtact--tatagtgct-gtttgcgaccgtaccaactttaatgttccaaaatagaaatattaaaagtata |
197 |
Q |
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|||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
25413982 |
taaaacacacaccacacttgaccacactagtgaggttatatagtgctagtatgcgaccgtaccaactttaattttccaaaatagaaatattaaaagtata |
25413883 |
T |
|
| Q |
198 |
tataatc |
204 |
Q |
| |
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||||||| |
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|
| T |
25413882 |
tataatc |
25413876 |
T |
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