View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2329_low_7 (Length: 527)
Name: NF2329_low_7
Description: NF2329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2329_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 496; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 1 - 512
Target Start/End: Original strand, 10437849 - 10438359
Alignment:
| Q |
1 |
ttcgagagctcatggaaataagttgtttccatgtacttttccaaacagtgccacaagtgcttatgccaggcaaataagatcaaataaacaaattcaaaca |
100 |
Q |
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| T |
10437849 |
ttcgagagctcatggaaataagttgtttccatgtacttttccaaacagtgccacaagtgcttatgccaggtaaataagatcaaataaacaaattcaaaca |
10437948 |
T |
|
| Q |
101 |
ggctctaagttatgatgatacattaacacagaaaaaacatagcactgcaatacatttaccataatgttgtcaaaagaaaaaggcttctaagagtttgtta |
200 |
Q |
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| T |
10437949 |
ggccctaagttatgatgatacattaacacagaaaaaacatagcactgcaatacatttaccataatgttgtcaaaagaaaaaggcttctaagagtttgtta |
10438048 |
T |
|
| Q |
201 |
taacaaattggctattttgaagaacttaaatcaatttcattttcacatattgaatcatatcactttaaagggtattaaacgatacaaacctgggaacact |
300 |
Q |
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| T |
10438049 |
taacaaattggctattttgaagaacttaaatcaatttcattttcacatattgaatcatatcactttaaagggta-taaacgatacaaacctgggaacact |
10438147 |
T |
|
| Q |
301 |
ccatcccttagcaaatgttgaagtatgagtaaaaggggcgtgcgcaagatccaaaaggttgtccaaaagtaagccgtgttcaaccggaagttccatgaca |
400 |
Q |
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| T |
10438148 |
ccatcccttagcaaatgttgaagtatgagtaaaaggggcgtgcgcaagatccaaaaggttgtccaaaagtaagccgtgttcaaccggaagttccatgaca |
10438247 |
T |
|
| Q |
401 |
atctgttttgtgaaaaaataccgggtaagaaaccatgatttttatcttcttttttctttataatcataaaattgtaattcactgttctttcatagctcag |
500 |
Q |
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| T |
10438248 |
atctgttttgtgaaaaaataccgggtaagaaaccatgatttttatcttcttttttctttataatcataaaattgtaattcactgttctttcatagctcag |
10438347 |
T |
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| Q |
501 |
aatacctattag |
512 |
Q |
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| T |
10438348 |
aatacctattag |
10438359 |
T |
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