View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2330_high_13 (Length: 214)

Name: NF2330_high_13
Description: NF2330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2330_high_13
NF2330_high_13
[»] scaffold0219 (1 HSPs)
scaffold0219 (20-126)||(15040-15146)
[»] chr5 (21 HSPs)
chr5 (21-126)||(38597579-38597684)
chr5 (21-116)||(7036009-7036104)
chr5 (26-81)||(26878325-26878380)
chr5 (21-109)||(25979939-25980027)
chr5 (25-126)||(13007014-13007115)
chr5 (22-126)||(38007140-38007244)
chr5 (21-79)||(11977186-11977244)
chr5 (21-75)||(13421725-13421779)
chr5 (25-126)||(6012340-6012441)
chr5 (21-126)||(31391959-31392064)
chr5 (21-81)||(15571267-15571327)
chr5 (21-81)||(26825210-26825270)
chr5 (25-118)||(6216679-6216773)
chr5 (21-71)||(7929980-7930030)
chr5 (29-125)||(11074103-11074199)
chr5 (25-116)||(34945207-34945298)
chr5 (21-126)||(9113927-9114032)
chr5 (21-81)||(24230033-24230094)
chr5 (26-71)||(41630297-41630342)
chr5 (29-81)||(4770927-4770979)
chr5 (21-55)||(14726741-14726775)
[»] chr8 (34 HSPs)
chr8 (21-116)||(27110674-27110769)
chr8 (21-126)||(31013771-31013876)
chr8 (21-126)||(45446011-45446116)
chr8 (21-110)||(10377481-10377570)
chr8 (21-126)||(37971079-37971181)
chr8 (29-83)||(23230436-23230490)
chr8 (25-126)||(17693814-17693914)
chr8 (27-88)||(33214869-33214930)
chr8 (22-78)||(3673231-3673287)
chr8 (25-81)||(25191311-25191367)
chr8 (25-88)||(7883478-7883541)
chr8 (21-79)||(8412596-8412654)
chr8 (28-126)||(28897502-28897600)
chr8 (21-78)||(27498583-27498640)
chr8 (25-116)||(8980985-8981076)
chr8 (25-75)||(36948688-36948738)
chr8 (21-126)||(40211505-40211611)
chr8 (25-123)||(1236896-1236994)
chr8 (25-63)||(18537629-18537667)
chr8 (25-79)||(24099507-24099561)
chr8 (25-62)||(1608242-1608279)
chr8 (31-116)||(14545113-14545198)
chr8 (25-114)||(15344094-15344183)
chr8 (25-114)||(15433159-15433248)
chr8 (25-114)||(15524463-15524552)
chr8 (21-78)||(20559992-20560049)
chr8 (21-78)||(20571554-20571611)
chr8 (27-88)||(29937905-29937966)
chr8 (21-81)||(20553490-20553550)
chr8 (25-69)||(41060482-41060526)
chr8 (24-116)||(41684220-41684312)
chr8 (27-126)||(7677480-7677579)
chr8 (26-116)||(1239613-1239703)
chr8 (25-70)||(29617713-29617758)
[»] chr4 (29 HSPs)
chr4 (25-116)||(26091125-26091216)
chr4 (21-126)||(2520579-2520684)
chr4 (25-126)||(54021667-54021768)
chr4 (21-126)||(21686443-21686547)
chr4 (21-126)||(19853714-19853818)
chr4 (21-126)||(53810830-53810935)
chr4 (21-81)||(13633916-13633976)
chr4 (21-116)||(9178159-9178254)
chr4 (21-116)||(10496144-10496239)
chr4 (25-116)||(26633882-26633973)
chr4 (25-126)||(4142956-4143057)
chr4 (21-81)||(9165290-9165350)
chr4 (29-116)||(22300655-22300742)
chr4 (25-88)||(33920858-33920921)
chr4 (21-126)||(45418331-45418433)
chr4 (21-116)||(48257661-48257756)
chr4 (20-126)||(22558667-22558773)
chr4 (30-116)||(43510010-43510096)
chr4 (21-81)||(5119140-5119200)
chr4 (25-81)||(22610990-22611046)
chr4 (21-77)||(51024712-51024768)
chr4 (21-126)||(24099272-24099378)
chr4 (21-78)||(29961179-29961236)
chr4 (21-126)||(35348108-35348213)
chr4 (25-81)||(53443932-53443988)
chr4 (28-88)||(56156793-56156853)
chr4 (28-107)||(51888437-51888516)
chr4 (21-72)||(52978621-52978672)
chr4 (51-116)||(29121890-29121954)
[»] scaffold0127 (1 HSPs)
scaffold0127 (21-126)||(15274-15379)
[»] chr7 (26 HSPs)
chr7 (21-126)||(42978392-42978497)
chr7 (25-126)||(8013667-8013768)
chr7 (21-126)||(13797133-13797238)
chr7 (25-126)||(30757021-30757122)
chr7 (21-126)||(37837660-37837765)
chr7 (21-81)||(45350439-45350499)
chr7 (21-116)||(9450349-9450444)
chr7 (29-126)||(12141510-12141607)
chr7 (25-126)||(34899809-34899907)
chr7 (21-116)||(40992966-40993060)
chr7 (25-126)||(19404956-19405057)
chr7 (21-126)||(39171794-39171899)
chr7 (29-81)||(48061214-48061266)
chr7 (21-76)||(4529863-4529918)
chr7 (21-88)||(39329033-39329100)
chr7 (25-107)||(25287402-25287484)
chr7 (25-126)||(19296666-19296767)
chr7 (21-126)||(48317014-48317119)
chr7 (25-81)||(47590102-47590158)
chr7 (34-81)||(9915941-9915988)
chr7 (34-81)||(9923853-9923900)
chr7 (40-79)||(24770058-24770097)
chr7 (31-80)||(38798584-38798633)
chr7 (25-53)||(5078668-5078696)
chr7 (25-81)||(5348830-5348886)
chr7 (25-109)||(25067874-25067958)
[»] chr6 (18 HSPs)
chr6 (21-126)||(33053370-33053475)
chr6 (21-126)||(12170278-12170383)
chr6 (21-116)||(3913786-3913880)
chr6 (21-116)||(32328795-32328890)
chr6 (21-110)||(605987-606076)
chr6 (21-118)||(32059692-32059789)
chr6 (21-76)||(9721762-9721817)
chr6 (31-81)||(68247-68297)
chr6 (28-126)||(30894427-30894524)
chr6 (21-126)||(34018343-34018448)
chr6 (22-126)||(23128402-23128506)
chr6 (21-76)||(9719644-9719699)
chr6 (21-76)||(9723631-9723686)
chr6 (40-126)||(29320064-29320150)
chr6 (21-78)||(29255692-29255749)
chr6 (25-116)||(4010712-4010803)
chr6 (29-126)||(7515403-7515501)
chr6 (21-61)||(14846330-14846370)
[»] chr3 (40 HSPs)
chr3 (21-126)||(33579650-33579755)
chr3 (21-110)||(36461649-36461738)
chr3 (21-117)||(38545617-38545713)
chr3 (21-116)||(40487107-40487202)
chr3 (21-116)||(48650947-48651042)
chr3 (21-126)||(10232852-10232957)
chr3 (21-126)||(21431407-21431511)
chr3 (21-118)||(35865144-35865240)
chr3 (21-106)||(45568666-45568751)
chr3 (21-126)||(47895933-47896038)
chr3 (25-77)||(43488848-43488900)
chr3 (21-126)||(9998248-9998354)
chr3 (29-106)||(12050870-12050947)
chr3 (21-126)||(32701280-32701385)
chr3 (21-116)||(40556493-40556588)
chr3 (21-126)||(47042254-47042359)
chr3 (25-81)||(9688481-9688537)
chr3 (21-81)||(10108020-10108080)
chr3 (21-81)||(10229256-10229316)
chr3 (21-126)||(6954898-6955003)
chr3 (22-75)||(9797780-9797833)
chr3 (25-126)||(12149984-12150085)
chr3 (49-126)||(20609099-20609176)
chr3 (21-114)||(23800123-23800219)
chr3 (21-81)||(31272054-31272114)
chr3 (21-81)||(43016637-43016697)
chr3 (25-88)||(21534048-21534111)
chr3 (21-126)||(54148773-54148875)
chr3 (22-116)||(26276005-26276099)
chr3 (32-81)||(52923362-52923411)
chr3 (25-116)||(50194495-50194586)
chr3 (25-118)||(629116-629209)
chr3 (25-81)||(953654-953710)
chr3 (21-81)||(36910902-36910962)
chr3 (21-65)||(46220460-46220504)
chr3 (21-76)||(20465219-20465273)
chr3 (25-63)||(20988020-20988058)
chr3 (25-79)||(29249029-29249083)
chr3 (25-116)||(38142357-38142448)
chr3 (25-81)||(53808109-53808165)
[»] scaffold0026 (1 HSPs)
scaffold0026 (21-116)||(72076-72171)
[»] chr2 (35 HSPs)
chr2 (21-126)||(7646264-7646369)
chr2 (21-116)||(35220123-35220215)
chr2 (21-126)||(36943326-36943431)
chr2 (25-126)||(4778549-4778650)
chr2 (21-126)||(7448040-7448145)
chr2 (25-126)||(7678080-7678181)
chr2 (21-126)||(11985432-11985537)
chr2 (21-126)||(12677498-12677603)
chr2 (21-126)||(31788248-31788353)
chr2 (21-81)||(1421463-1421523)
chr2 (26-126)||(18763265-18763365)
chr2 (25-116)||(4098899-4098990)
chr2 (21-116)||(27097617-27097712)
chr2 (25-84)||(42698919-42698978)
chr2 (29-110)||(5428086-5428167)
chr2 (21-126)||(43397321-43397426)
chr2 (21-85)||(29279814-29279877)
chr2 (25-81)||(31128995-31129051)
chr2 (21-126)||(9169460-9169564)
chr2 (25-126)||(4904338-4904439)
chr2 (40-116)||(37876810-37876886)
chr2 (28-79)||(17149966-17150017)
chr2 (31-81)||(8809084-8809134)
chr2 (25-79)||(41694411-41694465)
chr2 (21-78)||(13120000-13120057)
chr2 (27-75)||(4042230-4042278)
chr2 (25-88)||(28872003-28872064)
chr2 (27-62)||(8809001-8809036)
chr2 (28-79)||(39311143-39311194)
chr2 (28-78)||(37416501-37416551)
chr2 (44-78)||(38444982-38445016)
chr2 (32-65)||(17994979-17995012)
chr2 (21-69)||(36691658-36691707)
chr2 (21-81)||(25509314-25509373)
chr2 (32-76)||(36175693-36175737)
[»] chr1 (34 HSPs)
chr1 (21-111)||(35484595-35484685)
chr1 (21-126)||(44915430-44915536)
chr1 (21-81)||(7337910-7337970)
chr1 (21-116)||(34878483-34878578)
chr1 (25-116)||(51916864-51916955)
chr1 (21-126)||(45415344-45415449)
chr1 (29-116)||(10776672-10776759)
chr1 (21-88)||(26535185-26535252)
chr1 (21-103)||(21947843-21947924)
chr1 (25-81)||(27456329-27456385)
chr1 (29-116)||(11462660-11462747)
chr1 (31-81)||(41176977-41177027)
chr1 (20-81)||(5983620-5983681)
chr1 (29-126)||(29738838-29738935)
chr1 (25-81)||(18939111-18939167)
chr1 (25-116)||(44543062-44543153)
chr1 (25-79)||(14872428-14872482)
chr1 (20-110)||(31983964-31984054)
chr1 (25-104)||(940154-940233)
chr1 (21-116)||(1742066-1742161)
chr1 (21-116)||(3228055-3228150)
chr1 (28-126)||(15435074-15435172)
chr1 (35-116)||(7836978-7837059)
chr1 (27-116)||(49626701-49626790)
chr1 (25-81)||(21686662-21686718)
chr1 (26-81)||(569031-569085)
chr1 (29-104)||(31918772-31918847)
chr1 (26-81)||(43412162-43412217)
chr1 (25-116)||(45789354-45789445)
chr1 (25-123)||(32679304-32679402)
chr1 (29-86)||(4413097-4413154)
chr1 (44-80)||(31317559-31317595)
chr1 (55-123)||(32394818-32394886)
chr1 (25-69)||(35462297-35462341)
[»] scaffold0884 (1 HSPs)
scaffold0884 (29-126)||(2174-2271)
[»] scaffold0017 (1 HSPs)
scaffold0017 (21-126)||(32950-33055)
[»] scaffold0445 (1 HSPs)
scaffold0445 (25-125)||(1130-1230)
[»] scaffold0088 (1 HSPs)
scaffold0088 (21-126)||(50568-50673)
[»] scaffold0634 (1 HSPs)
scaffold0634 (25-126)||(8300-8401)
[»] scaffold0087 (1 HSPs)
scaffold0087 (21-126)||(25531-25636)
[»] scaffold0154 (1 HSPs)
scaffold0154 (30-77)||(25124-25171)
[»] scaffold0136 (1 HSPs)
scaffold0136 (21-88)||(37814-37881)
[»] scaffold0262 (1 HSPs)
scaffold0262 (25-81)||(2064-2120)
[»] scaffold0009 (1 HSPs)
scaffold0009 (25-116)||(58291-58382)
[»] scaffold0554 (1 HSPs)
scaffold0554 (32-81)||(10672-10721)
[»] scaffold0064 (1 HSPs)
scaffold0064 (25-81)||(19283-19338)
[»] scaffold0603 (1 HSPs)
scaffold0603 (43-116)||(7521-7594)
[»] scaffold0121 (1 HSPs)
scaffold0121 (34-79)||(31520-31565)


Alignment Details
Target: scaffold0219 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 15146 - 15040
Alignment:
Q  20 atttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatca 119  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||| ||||| ||    
T  15146 atttctagtgagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaatcacca 15047  T
Q  120 ctctaca 126  Q
    |||||||    
T  15046 ctctaca 15040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 2e-29; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 38597579 - 38597684
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| |||||||||||||||| ||||| | |    
T  38597579 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgacctagaatcacccc 38597678  T
Q  121 tctaca 126  Q
    ||||||    
T  38597679 tctaca 38597684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 7036009 - 7036104
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||  | ||||  ||| || |||||||||||||||||||    
T  7036009 tttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgacctaaaatca 7036104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 26878380 - 26878325
Alignment:
Q  26 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 26878325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 25979939 - 25980027
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacct 109  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||  | | || ||||||||||||    
T  25979939 tttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacct 25980027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 13007014 - 13007115
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||   ||||  ||| || ||||||||||||| ||||| | |||||    
T  13007014 tagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctcta 13007113  T
Q  125 ca 126  Q
    ||    
T  13007114 ca 13007115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 38007140 - 38007244
Alignment:
Q  22 ttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcact 121  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||  ||||| | ||    
T  38007140 ttctagtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccct 38007239  T
Q  122 ctaca 126  Q
    |||||    
T  38007240 ctaca 38007244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 11977244 - 11977186
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  11977244 tttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgag 11977186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 13421725 - 13421779
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcat 75  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  13421725 tttctagtgagagaaacttcaacttctctttaaactttctttcttcttcattcat 13421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 6012441 - 6012340
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | ||||  ||| || |||||||||| || ||||| | |||||    
T  6012441 tagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacccctcta 6012342  T
Q  125 ca 126  Q
    ||    
T  6012341 ca 6012340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 31392064 - 31391959
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||| ||| |  |||||||||||||||||||||||||| || ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  31392064 tttctagtgagaaaaattctaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 31391965  T
Q  121 tctaca 126  Q
    ||||||    
T  31391964 tctaca 31391959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 15571267 - 15571327
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||||||||||||  |||||||||| || |||||||||||||||||||||||||||    
T  15571267 tttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatcgagga 15571327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 26825210 - 26825270
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  26825210 tttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgagga 26825270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 6216679 - 6216773
Alignment:
Q  25 tagtgagagaaacttcaa-cttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatc 118  Q
    ||||||||||||||  || |||||||||||||||| |||||| ||| ||||||||||||| ||||  ||| || ||| |||||||||||||||||    
T  6216679 tagtgagagaaactcaaaacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatcatc 6216773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 7929980 - 7930030
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcat 71  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  7929980 tttctagtgagagaaactccaaattctctctaaactttctttctccttcat 7930030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 11074199 - 11074103
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga-tgagtggagttaagttattttttgacctaaaatcatcactctac 125  Q
    |||||||||| |||||| |||||||||||||||||||| || |||||||||||  | ||||  ||| |||| ||||||||||| ||||||||||||||    
T  11074199 gagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggtta-tttttgacctagaatcatcactctac 11074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 34945207 - 34945298
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||| |||||||| || |  |||  ||| || ||||||||||||| |||||    
T  34945207 tagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatca 34945298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 9114032 - 9113927
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||  ||||||||  ||||||||||||||||||||||||| ||| ||||||||||| | |||   ||| || ||||||| ||||| ||||| | |    
T  9114032 tttctagtaggagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccc 9113933  T
Q  121 tctaca 126  Q
    ||||||    
T  9113932 tctaca 9113927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 24230094 - 24230033
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctct-aaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||||||| |||||||||||| ||||||||||| | |||| |||||||||||    
T  24230094 tttctagtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgagga 24230033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 41630297 - 41630342
Alignment:
Q  26 agtgagagaaacttcaacttctctctaaactttctttctccttcat 71  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  41630297 agtgagagaaacttcaacttctctctaagctttctttctcattcat 41630342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 4770927 - 4770979
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||||  |||||||||||||||||||||||| |||| || ||||||||    
T  4770927 gagagaaactctaacttctctctaaactttctttcttcttcgttaatcgagga 4770979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 14726775 - 14726741
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaac 55  Q
    ||||||||||||||||||| |||||||||||||||    
T  14726775 tttctagtgagagaaactttaacttctctctaaac 14726741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 27110769 - 27110674
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  ||| || ||||||||| |||||||||    
T  27110769 tttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatca 27110674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 31013876 - 31013771
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  31013876 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 31013777  T
Q  121 tctaca 126  Q
    ||||||    
T  31013776 tctaca 31013771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 45446116 - 45446011
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | || |  ||| || |||||||||| || ||||||| |    
T  45446116 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaatcatctc 45446017  T
Q  121 tctaca 126  Q
    ||||||    
T  45446016 tctaca 45446011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 10377481 - 10377570
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgaccta 110  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || |||||||||||||    
T  10377481 tttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgaccta 10377570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 37971079 - 37971181
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||   ||||||  ||| || ||||||||||||| ||||| | |    
T  37971079 tttctaatgagagaaactccaacttctctctaaattttctttcttcttcattcatcgag---gagtggttttaggtcattttttgacctagaatcacccc 37971175  T
Q  121 tctaca 126  Q
    ||||||    
T  37971176 tctaca 37971181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 23230436 - 23230490
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatg 83  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  23230436 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatg 23230490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 17693914 - 17693814
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| | || |  ||| || | ||||||||||| ||||||| |||||    
T  17693914 tagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtca-tttttgacctagaatcatccctcta 17693816  T
Q  125 ca 126  Q
    ||    
T  17693815 ca 17693814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 33214930 - 33214869
Alignment:
Q  27 gtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtgg 33214869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 3673231 - 3673287
Alignment:
Q  22 ttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcga 78  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  3673231 ttctggtgaaagaaacttcaacttctctctaaactttctttctcctttattcatcga 3673287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 25191367 - 25191311
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  25191367 tagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgagga 25191311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 7883541 - 7883478
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||| |||||||| |||||||||    
T  7883541 tagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtgg 7883478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 8412654 - 8412596
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||    
T  8412654 tttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgag 8412596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 28897502 - 28897600
Alignment:
Q  28 tgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    |||||||||||||||||||| | |||||| || |||| |||||||| ||||||| | ||||  |||||| ||||||||| ||||||||| | |||||||    
T  28897502 tgagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatctaaaatcacccctctaca 28897600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 27498640 - 27498583
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcga 78  Q
    |||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  27498640 tttcaagtgagagaaacttcaacttatctttaagctttctttctccttcattcatcga 27498583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 8980985 - 8981076
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||| ||||||||||||||  |||| ||||| |||| || ||||||| | ||||  ||| || |||||||||||||||||||    
T  8980985 tagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatca 8981076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 36948738 - 36948688
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcat 75  Q
    |||||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  36948738 tagtgagacaaacttcaacttctctttaaactttctttctcctttattcat 36948688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 40211611 - 40211505
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagtta-ttttttgacctaaaatcatca 119  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||||| || |||||||| | ||||  ||| || | |||||||||||| ||||| |     
T  40211611 tttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttttgacctagaatcaccc 40211512  T
Q  120 ctctaca 126  Q
    |||||||    
T  40211511 ctctaca 40211505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 1236994 - 1236896
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactct 123  Q
    |||||||||||||||||||||||||||||  |||| ||||| |||  |||| ||||| | ||||  ||| || ||| ||||||||||||| ||| ||||    
T  1236994 tagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttgacctaaaataatccctct 1236896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 18537667 - 18537629
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttc 63  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18537667 tagtgagagaaacttcaacttttctctaaactttctttc 18537629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 24099561 - 24099507
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| ||||||||    
T  24099561 tagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgag 24099507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 1608279 - 1608242
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttcttt 62  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1608279 tagtgagagaaactttaacttctctctaaactttcttt 1608242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 14545198 - 14545113
Alignment:
Q  31 gagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||| |||||||||||||||     |||||||||||||| |  |||||||||||  ||| || |||||||||||||||||||    
T  14545198 gagaaactccaacttctctctaaaaaaaatttctccttcattcgttaaggatgagtggttttaggtcattttttgacctaaaatca 14545113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 15344094 - 15344183
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaat 114  Q
    |||||||||||||| ||||||||||||||  |||  ||||| |||| |||||||||| | ||||  ||| || ||| |||||||||||||    
T  15344094 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaat 15344183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 15433159 - 15433248
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaat 114  Q
    |||||||||||||| ||||||||||||||  |||  ||||| |||| |||||||||| | ||||  ||| || ||| |||||||||||||    
T  15433159 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaat 15433248  T

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Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 15524463 - 15524552
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaat 114  Q
    |||||||||||||| ||||||||||||||  |||  ||||| |||| |||||||||| | ||||  ||| || ||| |||||||||||||    
T  15524463 tagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaat 15524552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 20560049 - 20559992
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcga 78  Q
    ||||||| |||||||||  ||||||||||||||||||| ||||| |||| ||||||||    
T  20560049 tttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcga 20559992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 20571611 - 20571554
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcga 78  Q
    ||||||| |||||||||  ||||||||||||||||||| ||||| |||| ||||||||    
T  20571611 tttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcga 20571554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 29937905 - 29937966
Alignment:
Q  27 gtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    |||||||||||| ||| |||||| |||||||||||||| |||| ||||| ||||||| ||||    
T  29937905 gtgagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtgg 29937966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 20553550 - 20553490
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||| |||||||||  |||||||||| |||||||| ||||| |||| |||||||||||    
T  20553550 tttctagggagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgagga 20553490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 41060526 - 41060482
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttc 69  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||    
T  41060526 tagtgagagaaacttcatcatctctctaaaatttctttctccttc 41060482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 41684220 - 41684312
Alignment:
Q  24 ctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||||||||| ||||||| || ||  |||||||||||||||||||||  ||| | |||||  ||| || | ||||| |||||||||||    
T  41684220 ctagtgagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtcagtttttaacctaaaatca 41684312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 7677579 - 7677480
Alignment:
Q  27 gtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    |||||| |||||  || ||||||||||| ||||||||| |||| ||||| ||||| | ||||  ||| || ||||||||||||| ||||| | |||||||    
T  7677579 gtgagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 7677480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 1239703 - 1239613
Alignment:
Q  26 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||||||||||||||||||||||  |||| ||||| | |  |||||||||| | ||||  ||| ||  || |||||||||||||||    
T  1239703 agtgagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatca 1239613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 29617758 - 29617713
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttca 70  Q
    |||||||||||| ||||||||||||||||| ||| |||||| ||||    
T  29617758 tagtgagagaaatttcaacttctctctaaattttgtttctctttca 29617713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 26091216 - 26091125
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||   ||| |||||||||||||||| |||||    
T  26091216 tagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatca 26091125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 2520579 - 2520684
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  2520579 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 2520678  T
Q  121 tctaca 126  Q
    ||||||    
T  2520679 tctaca 2520684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 54021667 - 54021768
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||  ||| || |||||||||| |||||||||| |||||    
T  54021667 tagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatccctcta 54021766  T
Q  125 ca 126  Q
    ||    
T  54021767 ca 54021768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 21686547 - 21686443
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| | ||||  || || | |||||||||||||||||| | |    
T  21686547 tttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtgg-tttgaggtcttttttgacctaaaatcacccc 21686449  T
Q  121 tctaca 126  Q
    ||||||    
T  21686448 tctaca 21686443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 19853818 - 19853714
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||  ||| || | ||||||||||| ||||| | |    
T  19853818 tttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtca-tttttgacctagaatcacccc 19853720  T
Q  121 tctaca 126  Q
    ||||||    
T  19853719 tctaca 19853714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 53810830 - 53810935
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| || ||||||||||||||||||| ||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  53810830 tttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgacctataatcacccc 53810929  T
Q  121 tctaca 126  Q
    ||||||    
T  53810930 tctaca 53810935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 13633916 - 13633976
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  13633916 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgagga 13633976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 9178159 - 9178254
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||| |||| | ||||  ||| || ||||||||||||| |||||    
T  9178159 tttctggtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatca 9178254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 10496144 - 10496239
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||| | ||||  ||| || | ||||||||||| |||||    
T  10496144 tttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatca 10496239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 26633973 - 26633882
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||| | ||||  ||| || ||||||||||||| |||||    
T  26633973 tagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatca 26633882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 4143057 - 4142956
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||  ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |||||    
T  4143057 tagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 4142958  T
Q  125 ca 126  Q
    ||    
T  4142957 ca 4142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 9165350 - 9165290
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  9165350 tttcttgtgagagaaactccaacttctctctaaactttctttttccatcattcatcgagga 9165290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 22300655 - 22300742
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||| ||||||||||||||| ||| |||||| |||| || ||||||| ||||||  ||| || |||||||||||||||||||    
T  22300655 gagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatca 22300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 33920858 - 33920921
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| ||||    
T  33920858 tagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtgg 33920921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 45418331 - 45418433
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||| |||| |||||||||||||||||||||  || |||||||| |||||||||||   ||||||  ||| || ||||||||||||| ||||||| |    
T  45418331 tttctagcgagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgag---gagtggttttaggtcattttttgacctagaatcatccc 45418427  T
Q  121 tctaca 126  Q
    ||||||    
T  45418428 tctaca 45418433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 48257756 - 48257661
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||| ||| | ||||||||| | ||||  ||| || ||||||||||||| |||||    
T  48257756 tttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaatca 48257661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 22558773 - 22558667
Alignment:
Q  20 atttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatca 119  Q
    |||| ||| |||||||||| ||| |||||||||||||||||||||||||| ||||| ||||| | ||||  ||| || |||||||||| || ||||| |     
T  22558773 atttttagagagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacct 22558674  T
Q  120 ctctaca 126  Q
    |||||||    
T  22558673 ctctaca 22558667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 43510010 - 43510096
Alignment:
Q  30 agagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||| || | ||||  ||| || ||||||||||||| |||||    
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatca 43510096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 5119140 - 5119200
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||| ||| |||||||||| |||||||||| ||||||||||||||||| ||||    
T  5119140 tttctagtgagataaatttcaacttctttctaaactttatttctccttcattcatcaagga 5119200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 22610990 - 22611046
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  22610990 tagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgagga 22611046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 51024768 - 51024712
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcg 77  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  51024768 tttccagtgagagaaactccaacttctctctatactttctttctccttcgttcatcg 51024712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 24099378 - 24099272
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagtta-ttttttgacctaaaatcatca 119  Q
    |||||||||| |||||||| || ||||||||||||||||||||| || | |||||||||||   ||||  ||| || | |||||||||||| |||||||     
T  24099378 tttctagtgaaagaaactttaaattctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttttgacctagaatcatcc 24099279  T
Q  120 ctctaca 126  Q
    |||||||    
T  24099278 ctctaca 24099272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 29961236 - 29961179
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcga 78  Q
    |||||| ||||||||||| ||||||||||||||||||||||| |||||  ||||||||    
T  29961236 tttctaatgagagaaactccaacttctctctaaactttctttttcctttgttcatcga 29961179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 35348108 - 35348213
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||| ||||||| |||||||||| |||||||| ||||||||||  |||||| ||| | |||   ||| || ||||||||||||| ||||| | |    
T  35348108 tttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaatcacctc 35348207  T
Q  121 tctaca 126  Q
    ||||||    
T  35348208 tctaca 35348213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 53443932 - 53443988
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||| ||||| |||||    
T  53443932 tagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgagga 53443988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 56156853 - 56156793
Alignment:
Q  28 tgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    ||||||||||| |||||||||||||||||||||||||  ||| |||||| |||||| ||||    
T  56156853 tgagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtgg 56156793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 51888516 - 51888437
Alignment:
Q  28 tgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgac 107  Q
    |||||||||||||||||| ||||||   |||||||||| |||| |||||||||| | ||||  ||| || ||||||||||    
T  51888516 tgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgac 51888437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 52978621 - 52978672
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcatt 72  Q
    |||||||||||| ||||||||| ||||||||||||||| ||| | |||||||    
T  52978621 tttctagtgagataaacttcaatttctctctaaacttttttttttcttcatt 52978672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 29121954 - 29121890
Alignment:
Q  51 taaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||| ||| |||||||||| |||||||||||||| |||  ||| || |||||||||||||||||||    
T  29121954 taaattttatttctccttcgttcatcgaggatga-tggttttaggtcattttttgacctaaaatca 29121890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 15274 - 15379
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  15274 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgacctagaatcacccc 15373  T
Q  121 tctaca 126  Q
    ||||||    
T  15374 tctaca 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 6e-27; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 42978392 - 42978497
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| |||    
T  42978392 tttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccac 42978491  T
Q  121 tctaca 126  Q
    ||||||    
T  42978492 tctaca 42978497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 8013768 - 8013667
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| | ||||  |||  | ||||||||||||| ||||| | |||||    
T  8013768 tagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaatcacccctcta 8013669  T
Q  125 ca 126  Q
    ||    
T  8013668 ca 8013667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 13797238 - 13797133
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||  |||  ||| || ||||||| ||||| ||||| | |    
T  13797238 tttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaacctagaatcacccc 13797139  T
Q  121 tctaca 126  Q
    ||||||    
T  13797138 tctaca 13797133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 30757122 - 30757021
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    ||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |||||    
T  30757122 tagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccctcta 30757023  T
Q  125 ca 126  Q
    ||    
T  30757022 ca 30757021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 37837765 - 37837660
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  37837765 tttctaatgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccc 37837666  T
Q  121 tctaca 126  Q
    ||||||    
T  37837665 tctaca 37837660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 45350499 - 45350439
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  45350499 tttctagtgagagaaacttcaacttctctctaaactttttttctccttcgttcatagagga 45350439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 9450444 - 9450349
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||| |  |||  ||| || ||||||||||||| |||||    
T  9450444 tttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaatca 9450349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 12141607 - 12141510
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||| || | ||||  ||| || |||||||||| || ||||| | |||||||    
T  12141607 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacatagaatcacccctctaca 12141510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 34899907 - 34899809
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||| |   |||||||||  ||| || ||||||||||||| ||||| | |||||    
T  34899907 tagtgggagaaactccaacttctctctaaactttctttctccttcgttcacc---gatgagtggttttaggtcattttttgacctagaatcacccctcta 34899811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 40992966 - 40993060
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||| |||||||| |||||||||||||||||||  |||| |||| ||||||||||||| || |  ||| || |||||||||||||||||||    
T  40992966 tttctagtgggagaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatg-gtagttttaggtcattttttgacctaaaatca 40993060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 19405057 - 19404956
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    |||||||||||||| |||||||||||||||  |||||||||||| |||||| ||| | | ||||  ||| || ||||||||||||| ||||| | |||||    
T  19405057 tagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcacccctcta 19404958  T
Q  125 ca 126  Q
    ||    
T  19404957 ca 19404956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 39171899 - 39171794
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||| ||||| |||| | |||||||||||||||||| |||| ||||||||||| | ||||   || || ||||||||||||| ||||| | |    
T  39171899 tttctagtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaatcacccc 39171800  T
Q  121 tctaca 126  Q
    ||||||    
T  39171799 tctaca 39171794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 48061214 - 48061266
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  48061214 gagagaaactccaacttctctctaaactttctttatccttcgttcatcgagga 48061266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 4529863 - 4529918
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatc 76  Q
    ||||||||||||||||||||| |||||||||||   ||||||||||||||||||||    
T  4529863 tttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatc 4529918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 39329100 - 39329033
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||||  ||||||||||| ||||||    
T  39329100 tttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgg 39329033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 25287484 - 25287402
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgac 107  Q
    ||||||||||||||  ||||||||| |||| |||||||||||||||||| |||| ||   ||||  |||||||||| ||||||    
T  25287484 tagtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagttattatttgac 25287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 19296666 - 19296767
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    ||||| |||||||| ||||||| ||||||  ||| ||| |||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |||||    
T  19296666 tagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 19296765  T
Q  125 ca 126  Q
    ||    
T  19296766 ca 19296767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 48317119 - 48317014
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||| ||||| |||||||  |||||||||||||| || ||||||||||| |||||| |||| | ||||  ||| || |||||| |||||| ||||| | |    
T  48317119 tttcgagtgaaagaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccc 48317020  T
Q  121 tctaca 126  Q
    ||||||    
T  48317019 tctaca 48317014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 47590102 - 47590158
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||| | ||||||||||||||| |||||||||| ||| ||||| |||||    
T  47590102 tagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagagga 47590158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 9915941 - 9915988
Alignment:
Q  34 aaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||| ||||||||||| |||||||||||||||||| || ||||||||    
T  9915941 aaactccaacttctctccaaactttctttctccttcgtttatcgagga 9915988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 9923853 - 9923900
Alignment:
Q  34 aaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||| ||||||||||| |||||||||||||||||| || ||||||||    
T  9923853 aaactccaacttctctccaaactttctttctccttcgtttatcgagga 9923900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 24770058 - 24770097
Alignment:
Q  40 caacttctctctaaactttctttctccttcattcatcgag 79  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  24770058 caacttctctctaaactttctttctcattcgttcatcgag 24770097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 38798584 - 38798633
Alignment:
Q  31 gagaaacttcaacttctctctaaactttctttctccttcattcatcgagg 80  Q
    |||||||| |||||||| ||| ||||||||||||| ||| ||||||||||    
T  38798584 gagaaactccaacttctgtctgaactttctttctcattcgttcatcgagg 38798633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 5078696 - 5078668
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaa 53  Q
    |||||||||||||||||||||||||||||    
T  5078696 tagtgagagaaacttcaacttctctctaa 5078668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 5348886 - 5348830
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||| |||||||||| ||||| | |||  ||||||||||||| ||||||||||||    
T  5348886 tagtgaaagaaacttcatcttctttttaagttttctttctcctttattcatcgagga 5348830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 25067874 - 25067958
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacct 109  Q
    |||||||||||||| || |||||| ||||  ||||||| || |||||| |||||| ||||||||  ||| || || |||||||||    
T  25067874 tagtgagagaaactccaccttctcactaagttttctttttctttcatttatcgagaatgagtggttttatgtcatcttttgacct 25067958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 33053475 - 33053370
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||||| |    
T  33053475 tttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcatccc 33053376  T
Q  121 tctaca 126  Q
    ||||||    
T  33053375 tctaca 33053370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 12170278 - 12170383
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  12170278 tttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 12170377  T
Q  121 tctaca 126  Q
    ||||||    
T  12170378 tctaca 12170383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 3913880 - 3913786
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||| | ||||  ||| || ||||||||||||| |||||    
T  3913880 tttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgagga-gggtggttttaggtcattttttgacctagaatca 3913786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 32328890 - 32328795
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||| | ||||  |||||| | ||||||||||| |||||    
T  32328890 tttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctataatca 32328795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 605987 - 606076
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgaccta 110  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||||| ||||||||||| | |||   ||| || |||||||||||||    
T  605987 tttctagtgggagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgaccta 606076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 32059692 - 32059789
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatc 118  Q
    |||||||||||||||| | ||| |||||| ||||| ||||||||| ||||||||||||||||  ||||  |||||| ||| ||||||||| |||||||    
T  32059692 tttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaatcatc 32059789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 9721817 - 9721762
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatc 76  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  9721817 tttctagtgagagaaactccaacttctctctaaactttctttctcgttcgttcatc 9721762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 68297 - 68247
Alignment:
Q  31 gagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  68297 gagaaactccaacttctctctaaactttctttctccttcgttcatcgagga 68247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 30894427 - 30894524
Alignment:
Q  28 tgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||| | ||||  |||  | ||||||||||||| ||||| | |||||||    
T  30894427 tgagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctaca 30894524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 34018343 - 34018448
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||| |||||||||| |||||| || | ||||||||||||||||||||| |||||||||||||   ||  ||| || ||||||||||||| ||||| | |    
T  34018343 tttccagtgagagaagcttcaatttttgtctaaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccc 34018442  T
Q  121 tctaca 126  Q
    ||||||    
T  34018443 tctaca 34018448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 23128402 - 23128506
Alignment:
Q  22 ttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcact 121  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||| ||||| ||||| |  | |  ||| || ||||||||||||| ||||| | ||    
T  23128402 ttctagtgggagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccct 23128501  T
Q  122 ctaca 126  Q
    |||||    
T  23128502 ctaca 23128506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 9719699 - 9719644
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatc 76  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  9719699 tttcttgtgagagaaactccaacttctctctaaactttctttctcgttcgttcatc 9719644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 9723686 - 9723631
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatc 76  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| ||| ||||||    
T  9723686 tttctagtgaaagaaactccaacttctctctaaactttctttctcgttcgttcatc 9723631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 29320150 - 29320064
Alignment:
Q  40 caacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| ||||  ||| || || |||||| ||| ||||| | |||||||    
T  29320150 caacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatcacccctctaca 29320064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 29255749 - 29255692
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcga 78  Q
    |||||||||||||||| | ||||||||||| ||||| |||||||||||| ||||||||    
T  29255749 tttctagtgagagaaattccaacttctctccaaactctctttctccttcgttcatcga 29255692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 4010803 - 4010712
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||||||||||| |||||||||||  ||||||||||||| ||| || ||||| |||||   |||  | ||||||||||||| |||||    
T  4010803 tagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatca 4010712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 7515501 - 7515403
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagtta-ttttttgacctaaaatcatcactctaca 126  Q
    ||||||| || |||||||||||||||||| ||||||| ||| ||||||||||| | ||||  |||  ||| |||||||||||| ||||| | |||||||    
T  7515501 gagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgacctagaatcacccctctaca 7515403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 14846370 - 14846330
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctt 61  Q
    ||||||||||| |||||| |||||||||||| |||||||||    
T  14846370 tttctagtgagtgaaactccaacttctctcttaactttctt 14846330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 33579650 - 33579755
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || | ||||  |||||| ||||||||||||| ||||| | |    
T  33579650 tttctagtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcacccc 33579749  T
Q  121 tctaca 126  Q
    ||||||    
T  33579750 tctaca 33579755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 36461738 - 36461649
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgaccta 110  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||  ||| || |||||||||||||    
T  36461738 tttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttgaccta 36461649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 38545617 - 38545713
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||   ||||  ||| || ||||||||||||| ||||||    
T  38545617 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatcat 38545713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 40487107 - 40487202
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||   ||| || ||||||||||||| |||||    
T  40487107 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatca 40487202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 48651042 - 48650947
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||| | ||||  ||| || |||||||||||||||||||    
T  48651042 tttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctaaaatca 48650947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 10232852 - 10232957
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |||| | ||||  ||| || ||||||||||||| ||||| | |    
T  10232852 tttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaatcacccc 10232951  T
Q  121 tctaca 126  Q
    ||||||    
T  10232952 tctaca 10232957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 21431407 - 21431511
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || | ||||||||||||||||| | |    
T  21431407 tttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca-tttttgacctaaaatcacccc 21431505  T
Q  121 tctaca 126  Q
    ||||||    
T  21431506 tctaca 21431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 35865240 - 35865144
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||||  ||| || | ||||||| |||||||||||    
T  35865240 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtca-tttttgatctaaaatcatc 35865144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 45568751 - 45568666
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttga 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || |||||||||    
T  45568751 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga 45568666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 47895933 - 47896038
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||   ||  | ||||||||||||| ||||| | |    
T  47895933 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatcacccc 47896032  T
Q  121 tctaca 126  Q
    ||||||    
T  47896033 tctaca 47896038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 43488900 - 43488848
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43488900 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcg 43488848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 9998248 - 9998354
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagtta-ttttttgacctaaaatcatca 119  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || | |||||||||||| ||||| |     
T  9998248 tttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaatcaccc 9998347  T
Q  120 ctctaca 126  Q
    |||||||    
T  9998348 ctctaca 9998354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 12050947 - 12050870
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttga 106  Q
    |||||||||| ||||||||||||||| |||||||||||||| |||||| |||||| ||||  ||||||||||||||||    
T  12050947 gagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttattttttga 12050870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 32701280 - 32701385
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||| ||||||||||  | ||||  ||| || ||||||||||||| ||||||| |    
T  32701280 tttctagtggaagaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacctagaatcatccc 32701379  T
Q  121 tctaca 126  Q
    ||||||    
T  32701380 tctaca 32701385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 40556493 - 40556588
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||| ||| ||||||||||| | ||||  ||| || ||||||||||||| |||||    
T  40556493 tttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgacctagaatca 40556588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 47042359 - 47042254
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||| ||||||| ||||||||||||||||||| ||| |||||| ||||||||||| | ||||  ||| || ||||||| ||||| ||||| | |    
T  47042359 tttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataatcacccc 47042260  T
Q  121 tctaca 126  Q
    ||||||    
T  47042259 tctaca 47042254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 9688537 - 9688481
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  9688537 tagtgagagaaacttcaacttctctctaaattttctttcttcttcattcagcgagga 9688481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 10108020 - 10108080
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  10108020 tttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgagga 10108080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 10229256 - 10229316
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  10229256 tttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgagga 10229316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 6955003 - 6954898
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||||| ||||  ||||| | |||   ||| || ||||||||||||| ||||| | |    
T  6955003 tttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccc 6954904  T
Q  121 tctaca 126  Q
    ||||||    
T  6954903 tctaca 6954898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 9797833 - 9797780
Alignment:
Q  22 ttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcat 75  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| |||||    
T  9797833 ttctagtgagagaaactccaacttctctctaaactttatttctccttcgttcat 9797780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 12150085 - 12149984
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    |||||||||| |||||||||||||| |||||||||||||   |   ||||||||||| | ||||  |||||||||||||||||||| ||||| | |||||    
T  12150085 tagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccctcta 12149986  T
Q  125 ca 126  Q
    ||    
T  12149985 ca 12149984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 20609176 - 20609099
Alignment:
Q  49 tctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    ||||| ||||||||||||||||||| ||||||| | |||   |||||||||||||||||||||||||| | |||||||    
T  20609176 tctaagctttctttctccttcattcgtcgaggaggggtgattttaagttattttttgacctaaaatcaaccctctaca 20609099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 23800219 - 23800123
Alignment:
Q  21 tttctagtgagagaaacttcaactt-ctctctaaactttctttctccttcattcatcgagga--tgagtggagttaagttattttttgacctaaaat 114  Q
    |||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||| ||   | ||||  ||| ||||||||||||||||||||    
T  23800219 tttctagtgagagaaacttcaaatttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttgacctaaaat 23800123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 31272114 - 31272054
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||||||| ||||||||||||||  ||||||| |||||| |||||||||||    
T  31272114 tttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgagga 31272054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 43016637 - 43016697
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| ||| |||||||||||    
T  43016637 tttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgagga 43016697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 21534111 - 21534048
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    ||||||||||||||  || |||||||||||||||||||||||||| || |||||||||| ||||    
T  21534111 tagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtgg 21534048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 54148773 - 54148875
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||||||||   ||||| |||||||||||||||||||||||||| |  |||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  54148773 tttctagtgagaga---ttcaatttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccc 54148869  T
Q  121 tctaca 126  Q
    ||||||    
T  54148870 tctaca 54148875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 26276099 - 26276005
Alignment:
Q  22 ttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||| ||||||||||||  || |||||| |||||||||||||||||| |||||| |||||   ||||  ||| || |||||||||||||||||||    
T  26276099 ttctggtgagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttgacctaaaatca 26276005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 52923411 - 52923362
Alignment:
Q  32 agaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| |||||    
T  52923411 agaaactccaacttctctctaaactttctttctccttcgttcattgagga 52923362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 50194586 - 50194495
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||| ||||||||||||||  |||| ||||| |||| || ||||| | ||||||  |||  | |||||||||||||||||||    
T  50194586 tagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgacctaaaatca 50194495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 629209 - 629116
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatc 118  Q
    ||||||||||||||  |||||||||||||  |||| ||| | |||| |||||||||| | ||||  ||| || ||| |||||||||||||||||    
T  629209 tagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcatc 629116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 953710 - 953654
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||| ||  ||||||||||  |||||||||||||||||||| |||||    
T  953710 tagtgagagaaactccacattctctctaagttttctttctccttcattcattgagga 953654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 36910962 - 36910902
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||||||| |||||||||| |||||||| |||||  | | |||||||||||    
T  36910962 tttctagtgagagaaactccaacttctctataaactttttttcttttccgttcatcgagga 36910902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 46220460 - 46220504
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctc 65  Q
    |||||||||| |||||||  |||||||||||||||||||||||||    
T  46220460 tttctagtgatagaaactataacttctctctaaactttctttctc 46220504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 20465273 - 20465219
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatc 76  Q
    ||||| |||||||||||||||||||| || | || |||||||||||||||||||||    
T  20465273 tttcttgtgagagaaacttcaacttc-cttttaaatttctttctccttcattcatc 20465219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 20988058 - 20988020
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttc 63  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  20988058 tagtgagagaaactccaacttctctctaaacttcctttc 20988020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 29249029 - 29249083
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    ||||||||||||||  ||||||||| |||  ||||||||||||||| ||||||||    
T  29249029 tagtgagagaaactctaacttctctttaatttttctttctccttcactcatcgag 29249083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 38142357 - 38142448
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagtt-attttttgacctaaaatca 116  Q
    |||||||||||||| ||  |||| | |||  |||||||||| |||||||||| || |||||| || || |||| |||||||||||||||||||    
T  38142357 tagtgagagaaactccacattctttttaagttttctttctctttcattcatcaagaatgagt-gattttagttcattttttgacctaaaatca 38142448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 53808165 - 53808109
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||| ||||||||||||||  |||| ||||| |||  ||||||||||    
T  53808165 tagtgagagaaactccaacttctctctaagttttccttctctttcgctcatcgagga 53808109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 72171 - 72076
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||| |||||    
T  72171 tttctagtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatca 72076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 7646264 - 7646369
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  7646264 tttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 7646363  T
Q  121 tctaca 126  Q
    ||||||    
T  7646364 tctaca 7646369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 35220123 - 35220215
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    ||||  ||| |||||||||||||||| |||||    
T  35220123 tttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatcgaggg---gtggttttaggttattttttgacctagaatca 35220215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 36943431 - 36943326
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||| || |||||||| | ||||  ||| || ||||||||||||| ||||| |||    
T  36943431 tttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaatcaccac 36943332  T
Q  121 tctaca 126  Q
    ||||||    
T  36943331 tctaca 36943326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 4778549 - 4778650
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |||||    
T  4778549 tagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta 4778648  T
Q  125 ca 126  Q
    ||    
T  4778649 ca 4778650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 7448040 - 7448145
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||| | ||||  ||| || |||||||| |||| ||||| | |    
T  7448040 tttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaatcacccc 7448139  T
Q  121 tctaca 126  Q
    ||||||    
T  7448140 tctaca 7448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 7678181 - 7678080
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||| || ||||| || | ||||  ||| || ||||||||||||| ||||| | |||||    
T  7678181 tagtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctcta 7678082  T
Q  125 ca 126  Q
    ||    
T  7678081 ca 7678080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 11985537 - 11985432
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |||||||   ||||  |||||| ||||||| ||||| ||||| | |    
T  11985537 tttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatcacccc 11985438  T
Q  121 tctaca 126  Q
    ||||||    
T  11985437 tctaca 11985432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 12677603 - 12677498
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||| | || |  | | || ||||||||||||| ||||| | |    
T  12677603 tttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgacctagaatcacccc 12677504  T
Q  121 tctaca 126  Q
    ||||||    
T  12677503 tctaca 12677498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 31788248 - 31788353
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||   | ||  ||| || ||||||||||||| ||||| | |    
T  31788248 tttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaatcacccc 31788347  T
Q  121 tctaca 126  Q
    ||||||    
T  31788348 tctaca 31788353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 1421463 - 1421523
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  1421463 tttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgagga 1421523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 18763265 - 18763365
Alignment:
Q  26 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctac 125  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||   ||||  ||| || ||||||||||||| ||||| | ||||||    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctac 18763364  T
Q  126 a 126  Q
    |    
T  18763365 a 18763365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 4098899 - 4098990
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||| | ||||  ||| || ||||||||||||| |||||    
T  4098899 tagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatca 4098990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 27097712 - 27097617
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||   ||| || ||||||||||||| |||||    
T  27097712 tttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatca 27097617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 42698978 - 42698919
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatga 84  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  42698978 tagtgagagaaacttcaacttctttctaaactttctttctcctttattcattgaggatga 42698919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 5428167 - 5428086
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgaccta 110  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||||||||| | ||||  ||| |||| |||||||||||    
T  5428167 gagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgaccta 5428086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 43397426 - 43397321
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    |||||||||||||||||| |||||||||| |||||||||||| | |||| ||||||||| | | ||||  ||| || ||||||||||||| ||||| | |    
T  43397426 tttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgacctagaatcacctc 43397327  T
Q  121 tctaca 126  Q
    ||||||    
T  43397326 tctaca 43397321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 29279877 - 29279814
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgag 85  Q
    ||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||    
T  29279877 tttcttgtgagagaaactccaacttctctctaacctttctttct-cttcattcatcgaggatgag 29279814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 31129051 - 31128995
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  31129051 tagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgagga 31128995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 9169564 - 9169460
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||| || |||||||| | ||||  ||| || | ||||||||||| ||||| | |    
T  9169564 tttctagtgggagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtca-tttttgacctagaatcacccc 9169466  T
Q  121 tctaca 126  Q
    ||||||    
T  9169465 tctaca 9169460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 4904439 - 4904338
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| || || || ||   ||||  ||| || ||||||||||||| ||||| |||| ||    
T  4904439 tagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttgacctataatcaccacttta 4904340  T
Q  125 ca 126  Q
    ||    
T  4904339 ca 4904338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 37876886 - 37876810
Alignment:
Q  40 caacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||||||||||||||||||| |||| ||||||||||| | ||||  ||| || | ||||||||||| |||||    
T  37876886 caacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatca 37876810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 17149966 - 17150017
Alignment:
Q  28 tgagagaaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    |||||||||||||| |||||||||||  ||| ||||||||||||||||||||    
T  17149966 tgagagaaacttcaccttctctctaagttttatttctccttcattcatcgag 17150017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 8809084 - 8809134
Alignment:
Q  31 gagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||  ||||||||||||||||||||||||||||||| | |||||||    
T  8809084 gagaaactctaacttctctctaaactttctttctccttcatacgtcgagga 8809134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 41694411 - 41694465
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    |||| |||||||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  41694411 tagtaagagaaacttcaccttctctctaagctttctctctccttcactcatcgag 41694465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 13120000 - 13120057
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcga 78  Q
    |||||||||||||||||||   ||||||| |||||| ||||||| |||||||||||||    
T  13120000 tttctagtgagagaaactttgccttctctataaactctctttcttcttcattcatcga 13120057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 4042278 - 4042230
Alignment:
Q  27 gtgagagaaacttcaacttctctctaaactttctttctccttcattcat 75  Q
    |||||||||||| ||||||||||||||||||| |||||| ||| |||||    
T  4042278 gtgagagaaactccaacttctctctaaactttttttctcattccttcat 4042230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 28872064 - 28872003
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    |||||||||||||| ||  ||||||||||  ||| |||||| ||||||||||||||||||||||    
T  28872064 tagtgagagaaactccacattctctctaa--tttttttctcattcattcatcgaggatgagtgg 28872003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 8809001 - 8809036
Alignment:
Q  27 gtgagagaaacttcaacttctctctaaactttcttt 62  Q
    |||||||||||| |||||||||||||||||||||||    
T  8809001 gtgagagaaactccaacttctctctaaactttcttt 8809036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 39311194 - 39311143
Alignment:
Q  28 tgagagaaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    |||||||||||  |||||| |||||| |||||||||| ||||||||||||||    
T  39311194 tgagagaaactcgaacttcgctctaagctttctttcttcttcattcatcgag 39311143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 37416501 - 37416551
Alignment:
Q  28 tgagagaaacttcaacttctctctaaactttctttctccttcattcatcga 78  Q
    ||||||||||||||||||||||||||| ||| ||| || ||||||| ||||    
T  37416501 tgagagaaacttcaacttctctctaaattttttttatctttcattcgtcga 37416551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 38444982 - 38445016
Alignment:
Q  44 ttctctctaaactttctttctccttcattcatcga 78  Q
    |||||||||||||||||||||||||| ||||||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcga 38445016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 17995012 - 17994979
Alignment:
Q  32 agaaacttcaacttctctctaaactttctttctc 65  Q
    |||||||||| |||||||||||||||||||||||    
T  17995012 agaaacttcatcttctctctaaactttctttctc 17994979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 36691658 - 36691707
Alignment:
Q  21 tttctagtgagagaaacttcaac-ttctctctaaactttctttctccttc 69  Q
    |||||||||||||||||| |||| |||| ||||||| |||||||||||||    
T  36691658 tttctagtgagagaaactccaactttctttctaaaccttctttctccttc 36691707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 25509373 - 25509314
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||| |||||  ||||| ||||||| |||||||||| |||| |||||||||||    
T  25509373 tttctagtgagaaaaactcaaacttttctctaa-ctttctttcttcttcgttcatcgagga 25509314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 36175737 - 36175693
Alignment:
Q  32 agaaacttcaacttctctctaaactttctttctccttcattcatc 76  Q
    ||||||||||  ||||||||||  |||||||||||||||||||||    
T  36175737 agaaacttcacattctctctaagttttctttctccttcattcatc 36175693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 35484685 - 35484595
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaa 111  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||   || || ||||||||||||||    
T  35484685 tttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttgacctaa 35484595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 44915430 - 44915536
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgag-tggagttaagttattttttgacctaaaatcatca 119  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| | | |||  ||| || |||||||| | |||||||||||    
T  44915430 tttctagtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttggcttaaaatcatca 44915529  T
Q  120 ctctaca 126  Q
    |||||||    
T  44915530 ctctaca 44915536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 7337970 - 7337910
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7337970 tttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgagga 7337910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 34878578 - 34878483
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||| | ||||  ||| || ||||||||||||| |||||    
T  34878578 tttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatca 34878483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 51916955 - 51916864
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||| | ||||  ||| | ||||||||||||||||||||    
T  51916955 tagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacctaaaatca 51916864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 45415344 - 45415449
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| || |||||||| | ||||  ||| || ||||||||| ||| ||||| | |    
T  45415344 tttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatcacccc 45415443  T
Q  121 tctaca 126  Q
    ||||||    
T  45415444 tctaca 45415449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 10776759 - 10776672
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||  |||  | ||||||||||||| |||||    
T  10776759 gagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatca 10776672  T

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Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 26535185 - 26535252
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||| |||||| |||||||||||    
T  26535185 tttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtgg 26535252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 21947924 - 21947843
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttt 103  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||| ||||  ||| |||||||||    
T  21947924 tttctagtgagagaaacttcaatttttctctaaactttctttct-cttcgttcatcgaggatgggtggttttaggttattttt 21947843  T

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Target: chr1; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 27456329 - 27456385
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  27456329 tagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgagga 27456385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 11462747 - 11462660
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| || || | |||   ||| |||||||||||||||| |||||    
T  11462747 gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaatca 11462660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 41176977 - 41177027
Alignment:
Q  31 gagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  41176977 gagaaactccaacttctctctaaactttctttctccttcgttcatcgagga 41177027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 5983620 - 5983681
Alignment:
Q  20 atttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||| ||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  5983620 atttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgagga 5983681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 29738935 - 29738838
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||||||| | ||||  ||| || | ||||| ||||| ||||| | |||||||    
T  29738935 gagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctctaca 29738838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 18939111 - 18939167
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||    
T  18939111 tagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgagga 18939167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 44543062 - 44543153
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||| ||||||||||||||  |||| ||||| |||| |||||||||| | |||   ||| |||||| |||||||||||||||    
T  44543062 tagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatca 44543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 14872428 - 14872482
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    |||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||    
T  14872428 tagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgag 14872482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 31983964 - 31984054
Alignment:
Q  20 atttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgaccta 110  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||  |||||| ||||   ||||  ||| || |||||||||||||    
T  31983964 atttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgaccta 31984054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 940154 - 940233
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttatttttt 104  Q
    |||||||| |||||  || ||||||||||| |||||||||| ||  ||||||||||||||||||  |||||| |||||||    
T  940154 tagtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagtggttttaagtcatttttt 940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 1742066 - 1742161
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||||| ||| |||||| ||||   ||||  ||| || ||||||||||||| |||||    
T  1742066 tttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaatca 1742161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 3228055 - 3228150
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||| ||| ||||| ||||||||| ||||| ||| ||||||||||||||||| |||| | ||||  ||| || ||||||| ||||| |||||    
T  3228055 tttctagttagaaaaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcattttttaacctacaatca 3228150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 15435172 - 15435074
Alignment:
Q  28 tgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||||||| |||| | | ||  ||| || ||||||||| ||| ||||| | |||||||    
T  15435172 tgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgatctagaatcaaccctctaca 15435074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 7837059 - 7836978
Alignment:
Q  35 aacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||| |||||||||||||||| ||||||||| ||| ||||||||||| | ||||  ||| || ||||||||| ||| |||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatca 7836978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 49626701 - 49626790
Alignment:
Q  27 gtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||| ||||||||||||||   ||| ||||| |||| |||||||||| | ||||  ||| || ||| |||||||||||||||    
T  49626701 gtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatca 49626790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 21686662 - 21686718
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||| |||||| | |||||| |||||||||| ||| |||||||||||    
T  21686662 tagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgagga 21686718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 569085 - 569031
Alignment:
Q  26 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||||||||||||| |||| |||||||||| |||| ||||| ||||    
T  569085 agtgagagaaacttcaacttctctataaa-tttctttctctttcactcatctagga 569031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 31918772 - 31918847
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttatttttt 104  Q
    |||| ||||||||| |||||||||||||||||||| | || |||| ||||||| | ||||  ||||||| ||||||    
T  31918772 gagaaaaacttcaatttctctctaaactttctttcacatttattcgtcgaggaggggtggttttaagttttttttt 31918847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 43412162 - 43412217
Alignment:
Q  26 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    ||||||| |||||||||||| |||||||  | |||||||| |||||||||||||||    
T  43412162 agtgagaaaaacttcaacttatctctaacttctctttctctttcattcatcgagga 43412217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 45789354 - 45789445
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    ||||||||||||||  |  ||||||||||| ||| ||||| |||||||||||||||||   |||  ||| || ||||||||||||| |||||    
T  45789354 tagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgacctagaatca 45789445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 32679402 - 32679304
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactct 123  Q
    |||||||||||| | |||||| |||||||  |||||||||| |||| || ||||||| | ||||  ||| || |||||||||| || ||||||| ||||    
T  32679402 tagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttgacatagaatcatccctct 32679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 4413097 - 4413154
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagt 86  Q
    ||||||||||  ||||| |||||||||||||||||| |||| || |||||||| ||||    
T  4413097 gagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagt 4413154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 31317559 - 31317595
Alignment:
Q  44 ttctctctaaactttctttctccttcattcatcgagg 80  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  31317559 ttctctctaaattttctttctctttcattcatcgagg 31317595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 32394818 - 32394886
Alignment:
Q  55 ctttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactct 123  Q
    ||||||||||||||| ||||||||||| | ||||  ||| || |||||||||| || ||||||| ||||    
T  32394818 ctttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacttagaatcatccctct 32394886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 35462341 - 35462297
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttc 69  Q
    ||||| ||||||||  ||||| |||||||||||||||||||||||    
T  35462341 tagtgggagaaactctaacttatctctaaactttctttctccttc 35462297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 2271 - 2174
Alignment:
Q  29 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactctaca 126  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||  |||||| ||||||||| ||| ||||| | |||||||    
T  2271 gagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccctctaca 2174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 33055 - 32950
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||||||||||||  |||||||||||||||||||||||| |||| || |||||||| ||||||  ||| || |||||||||| || ||||| | |    
T  33055 tttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttgacatagaatcacccc 32956  T
Q  121 tctaca 126  Q
    ||||||    
T  32955 tctaca 32950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 1130 - 1230
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||   ||||  ||| || ||||||||||||| ||||| | |||||    
T  1130 tagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctcta 1229  T
Q  125 c 125  Q
    |    
T  1230 c 1230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 50568 - 50673
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||| ||||| | |||   ||| || | ||||||||||| ||||||| |    
T  50568 tttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgacctagaatcatccc 50667  T
Q  121 tctaca 126  Q
    ||||||    
T  50668 tctaca 50673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 8300 - 8401
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcactcta 124  Q
    |||||||||| |||||||||||||| |||||||||||||   |   ||||||||||| | ||||  |||||||||||||||||||| ||||| | |||||    
T  8300 tagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccctcta 8399  T
Q  125 ca 126  Q
    ||    
T  8400 ca 8401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 25636 - 25531
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatcatcac 120  Q
    ||||||||||||||||||||||||| ||||||||     |||||||||| ||||||||||| | ||||  ||| || ||||||||||||| ||||| | |    
T  25636 tttctagtgagagaaacttcaacttttctctaaaaaaattttctccttcgttcatcgaggaggggtggttttatgtcattttttgacctataatcacccc 25537  T
Q  121 tctaca 126  Q
    ||||||    
T  25536 tctaca 25531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 25124 - 25171
Alignment:
Q  30 agagaaacttcaacttctctctaaactttctttctccttcattcatcg 77  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  25124 agagaaacttcaacttttctctaaactttctttctctttcattcatcg 25171  T

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Target: scaffold0136 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 37814 - 37881
Alignment:
Q  21 tttctagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtgg 88  Q
    |||||| ||||||||| || | |||||||||||  ||||||||||||||||||||||| |||||||||    
T  37814 tttctaatgagagaaattttaccttctctctaagttttctttctccttcattcatcgaagatgagtgg 37881  T

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Target: scaffold0262 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 2120 - 2064
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||| |||||||| || ||||||||||||| |||||||||| |||||    
T  2120 tagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgagga 2064  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 58382 - 58291
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||||| ||||||||||||||  |||| || || |||| || ||||||| | ||||  ||| || |||||||||||||||||||    
T  58382 tagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatca 58291  T

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Target: scaffold0554 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 10672 - 10721
Alignment:
Q  32 agaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||||    
T  10672 agaaactctaacttctctctaaacttgcttcctccttcattcatcgagga 10721  T

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Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 19338 - 19283
Alignment:
Q  25 tagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgagga 81  Q
    |||||||||||||| |||||||||||| || |||||||||| |||| ||||||||||    
T  19338 tagtgagagaaactccaacttctctct-aattttctttctctttcactcatcgagga 19283  T

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Target: scaffold0603 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 7521 - 7594
Alignment:
Q  43 cttctctctaaactttctttctccttcattcatcgaggatgagtggagttaagttattttttgacctaaaatca 116  Q
    |||||||||||  ||||||||||||| |||||||||||| |  |||  ||| || ||||||||||||| |||||    
T  7521 cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatca 7594  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 31565 - 31520
Alignment:
Q  34 aaacttcaacttctctctaaactttctttctccttcattcatcgag 79  Q
    ||||| |||||| ||| ||||||||||||||||||| |||||||||    
T  31565 aaactccaacttttctttaaactttctttctccttcgttcatcgag 31520  T

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