View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2331_low_5 (Length: 248)

Name: NF2331_low_5
Description: NF2331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2331_low_5
NF2331_low_5
[»] chr1 (66 HSPs)
chr1 (8-240)||(26633344-26633574)
chr1 (8-121)||(41804059-41804172)
chr1 (8-121)||(46973138-46973251)
chr1 (13-121)||(19053993-19054101)
chr1 (8-122)||(13173769-13173882)
chr1 (8-122)||(36076584-36076697)
chr1 (8-121)||(36908512-36908625)
chr1 (8-118)||(13972001-13972109)
chr1 (15-121)||(35521548-35521654)
chr1 (8-118)||(46141719-46141829)
chr1 (8-105)||(27485009-27485106)
chr1 (8-125)||(4515956-4516078)
chr1 (8-118)||(49924793-49924903)
chr1 (13-118)||(6437570-6437675)
chr1 (8-104)||(23276134-23276230)
chr1 (14-105)||(35258904-35258995)
chr1 (8-105)||(19499138-19499233)
chr1 (8-118)||(49927539-49927649)
chr1 (13-121)||(14172048-14172156)
chr1 (15-111)||(25040109-25040205)
chr1 (11-118)||(18975149-18975256)
chr1 (10-121)||(38689866-38689976)
chr1 (8-86)||(6562187-6562265)
chr1 (8-118)||(11183123-11183233)
chr1 (8-105)||(19495019-19495113)
chr1 (12-110)||(35527043-35527141)
chr1 (8-105)||(29434923-29435020)
chr1 (8-105)||(48751436-48751533)
chr1 (7-121)||(29261349-29261462)
chr1 (11-121)||(51666668-51666777)
chr1 (16-121)||(21944414-21944519)
chr1 (8-120)||(49857875-49857985)
chr1 (8-92)||(30910029-30910113)
chr1 (8-86)||(9711677-9711755)
chr1 (7-57)||(27115848-27115898)
chr1 (8-86)||(30905740-30905818)
chr1 (8-98)||(51289986-51290076)
chr1 (11-80)||(13178161-13178230)
chr1 (8-49)||(14174911-14174952)
chr1 (9-118)||(23272786-23272895)
chr1 (8-85)||(52802100-52802177)
chr1 (12-56)||(51337543-51337587)
chr1 (8-86)||(5077910-5077988)
chr1 (8-58)||(15047279-15047329)
chr1 (8-62)||(44336242-44336296)
chr1 (8-58)||(44470037-44470087)
chr1 (8-69)||(23359375-23359436)
chr1 (11-68)||(51288874-51288931)
chr1 (58-118)||(1872045-1872105)
chr1 (6-58)||(22345258-22345309)
chr1 (40-120)||(42570077-42570157)
chr1 (8-80)||(44465571-44465643)
chr1 (8-55)||(3941176-3941223)
chr1 (8-63)||(6557907-6557962)
chr1 (11-86)||(23913826-23913901)
chr1 (8-59)||(29352255-29352306)
chr1 (8-55)||(45943752-45943799)
chr1 (8-55)||(46044752-46044799)
chr1 (59-121)||(1656161-1656223)
chr1 (8-58)||(20349454-20349504)
chr1 (36-86)||(37014919-37014969)
chr1 (8-58)||(41453835-41453885)
chr1 (8-73)||(29438046-29438111)
chr1 (12-65)||(35255813-35255866)
chr1 (6-113)||(36911694-36911799)
chr1 (8-68)||(52805559-52805619)
[»] chr5 (50 HSPs)
chr5 (8-121)||(18538361-18538474)
chr5 (8-121)||(34682191-34682304)
chr5 (6-118)||(18310045-18310157)
chr5 (8-118)||(20192290-20192400)
chr5 (8-122)||(25499913-25500029)
chr5 (8-122)||(19228672-19228786)
chr5 (14-127)||(1398532-1398645)
chr5 (8-112)||(18307198-18307301)
chr5 (8-118)||(20200174-20200284)
chr5 (8-80)||(34122499-34122571)
chr5 (8-111)||(38968039-38968142)
chr5 (8-118)||(3603174-3603284)
chr5 (9-110)||(33993225-33993326)
chr5 (8-105)||(41201678-41201775)
chr5 (10-86)||(34123963-34124039)
chr5 (8-105)||(17966912-17967009)
chr5 (8-112)||(42539399-42539503)
chr5 (13-111)||(35567058-35567156)
chr5 (10-118)||(3600273-3600382)
chr5 (8-121)||(24053114-24053227)
chr5 (65-113)||(1401428-1401476)
chr5 (7-118)||(31094500-31094610)
chr5 (7-86)||(41798787-41798866)
chr5 (11-85)||(8702227-8702301)
chr5 (8-98)||(17965806-17965896)
chr5 (8-118)||(25877559-25877668)
chr5 (8-86)||(27867846-27867924)
chr5 (8-122)||(33995174-33995288)
chr5 (12-97)||(30354426-30354511)
chr5 (8-105)||(39743174-39743271)
chr5 (8-105)||(42942477-42942574)
chr5 (8-68)||(1397376-1397436)
chr5 (20-112)||(7796604-7796696)
chr5 (39-118)||(42537138-42537217)
chr5 (37-103)||(540911-540977)
chr5 (8-58)||(542816-542866)
chr5 (8-86)||(28387238-28387316)
chr5 (8-110)||(42865804-42865906)
chr5 (7-105)||(42937142-42937240)
chr5 (8-105)||(13568101-13568198)
chr5 (8-69)||(28388545-28388606)
chr5 (8-105)||(41799793-41799890)
chr5 (10-54)||(4434330-4434374)
chr5 (11-47)||(24050035-24050071)
chr5 (10-86)||(25897107-25897183)
chr5 (15-58)||(7801020-7801063)
chr5 (8-46)||(25497520-25497558)
chr5 (8-105)||(7757275-7757372)
chr5 (73-118)||(26366825-26366870)
chr5 (33-118)||(30611176-30611261)
[»] chr8 (40 HSPs)
chr8 (8-118)||(18438571-18438681)
chr8 (8-127)||(41858147-41858266)
chr8 (8-121)||(7168022-7168135)
chr8 (8-118)||(18441467-18441577)
chr8 (8-113)||(41855310-41855415)
chr8 (8-118)||(35389445-35389555)
chr8 (8-121)||(4866369-4866481)
chr8 (10-116)||(38871738-38871844)
chr8 (10-103)||(18205738-18205831)
chr8 (8-105)||(45454356-45454453)
chr8 (8-110)||(3395837-3395939)
chr8 (8-105)||(43188023-43188121)
chr8 (8-113)||(42602402-42602507)
chr8 (8-80)||(35962282-35962354)
chr8 (8-68)||(42605260-42605320)
chr8 (8-86)||(1114712-1114790)
chr8 (8-118)||(40077276-40077386)
chr8 (12-113)||(22577607-22577708)
chr8 (13-106)||(26455712-26455805)
chr8 (7-84)||(28168624-28168701)
chr8 (8-105)||(38872956-38873053)
chr8 (8-88)||(7172613-7172693)
chr8 (15-118)||(34823049-34823152)
chr8 (8-58)||(1116214-1116264)
chr8 (8-105)||(21406217-21406314)
chr8 (8-105)||(21800709-21800806)
chr8 (8-105)||(21835205-21835302)
chr8 (8-112)||(39751017-39751120)
chr8 (8-68)||(41276886-41276946)
chr8 (15-86)||(35966782-35966853)
chr8 (8-118)||(5304170-5304280)
chr8 (7-69)||(41743876-41743938)
chr8 (8-69)||(20549258-20549319)
chr8 (14-62)||(38331069-38331117)
chr8 (8-55)||(28646273-28646320)
chr8 (8-55)||(28650857-28650904)
chr8 (8-55)||(38135635-38135682)
chr8 (13-55)||(38134362-38134404)
chr8 (30-62)||(4867815-4867847)
chr8 (46-118)||(5300684-5300756)
[»] chr6 (38 HSPs)
chr6 (11-121)||(13479660-13479770)
chr6 (10-100)||(23986009-23986099)
chr6 (8-118)||(35021289-35021399)
chr6 (9-118)||(13404659-13404768)
chr6 (16-99)||(12783991-12784074)
chr6 (8-121)||(23958824-23958937)
chr6 (7-122)||(18001147-18001261)
chr6 (6-92)||(7537161-7537247)
chr6 (11-112)||(13401429-13401530)
chr6 (8-118)||(29286166-29286276)
chr6 (15-122)||(16192705-16192809)
chr6 (8-110)||(2050974-2051075)
chr6 (8-118)||(25141105-25141215)
chr6 (8-112)||(7361134-7361238)
chr6 (8-68)||(31768740-31768800)
chr6 (8-118)||(18605982-18606091)
chr6 (8-86)||(18610232-18610309)
chr6 (64-122)||(32026038-32026096)
chr6 (12-121)||(32643551-32643660)
chr6 (11-99)||(29076352-29076440)
chr6 (11-99)||(29109885-29109973)
chr6 (11-99)||(29111325-29111413)
chr6 (13-68)||(29065727-29065782)
chr6 (13-68)||(29074740-29074795)
chr6 (13-68)||(29079504-29079559)
chr6 (13-68)||(29107313-29107368)
chr6 (8-65)||(8193235-8193292)
chr6 (8-105)||(29061246-29061343)
chr6 (18-55)||(35241913-35241950)
chr6 (13-92)||(2052615-2052693)
chr6 (8-55)||(17596941-17596988)
chr6 (8-63)||(18347033-18347088)
chr6 (8-55)||(28362757-28362804)
chr6 (24-118)||(6320531-6320625)
chr6 (64-110)||(29667828-29667874)
chr6 (11-48)||(13616247-13616284)
chr6 (45-122)||(34801470-34801547)
chr6 (65-121)||(26702742-26702798)
[»] chr2 (56 HSPs)
chr2 (8-122)||(45475373-45475487)
chr2 (8-118)||(35493367-35493477)
chr2 (8-121)||(2917617-2917730)
chr2 (8-118)||(28342460-28342570)
chr2 (11-119)||(19186683-19186791)
chr2 (8-112)||(41500260-41500364)
chr2 (8-120)||(19187249-19187361)
chr2 (8-112)||(41181380-41181484)
chr2 (8-112)||(12905492-12905596)
chr2 (6-110)||(24512112-24512216)
chr2 (6-106)||(43493281-43493381)
chr2 (8-121)||(23409527-23409640)
chr2 (11-110)||(34921788-34921886)
chr2 (11-110)||(35490625-35490724)
chr2 (8-118)||(25184856-25184965)
chr2 (12-114)||(34918393-34918495)
chr2 (8-77)||(2648776-2648845)
chr2 (6-122)||(19469918-19470033)
chr2 (8-86)||(1096564-1096642)
chr2 (8-118)||(24607594-24607704)
chr2 (8-121)||(12908455-12908568)
chr2 (8-113)||(43950268-43950372)
chr2 (13-120)||(8268780-8268887)
chr2 (8-105)||(25964754-25964858)
chr2 (8-86)||(27276400-27276478)
chr2 (8-110)||(41497417-41497519)
chr2 (12-86)||(43943658-43943732)
chr2 (8-106)||(45137459-45137557)
chr2 (8-121)||(45479820-45479933)
chr2 (8-58)||(3795334-3795384)
chr2 (8-62)||(20951072-20951126)
chr2 (8-110)||(41008954-41009055)
chr2 (8-121)||(36255739-36255852)
chr2 (8-68)||(9660081-9660141)
chr2 (8-68)||(24601626-24601686)
chr2 (8-68)||(24612428-24612488)
chr2 (12-112)||(41053698-41053798)
chr2 (8-63)||(38945754-38945809)
chr2 (12-86)||(1149441-1149515)
chr2 (8-58)||(3803569-3803619)
chr2 (9-55)||(14181849-14181895)
chr2 (11-105)||(34639343-34639437)
chr2 (8-113)||(2648059-2648164)
chr2 (9-122)||(36254950-36255063)
chr2 (8-80)||(1101078-1101150)
chr2 (38-118)||(16580482-16580562)
chr2 (8-51)||(16583595-16583638)
chr2 (15-98)||(23786081-23786164)
chr2 (8-86)||(7189977-7190054)
chr2 (15-61)||(17911167-17911213)
chr2 (8-86)||(24749655-24749733)
chr2 (13-55)||(42177245-42177287)
chr2 (8-61)||(43257744-43257797)
chr2 (11-63)||(30271066-30271118)
chr2 (59-103)||(40675705-40675749)
chr2 (6-58)||(41004526-41004577)
[»] chr4 (59 HSPs)
chr4 (8-122)||(21472510-21472624)
chr4 (8-121)||(29700328-29700441)
chr4 (8-113)||(49572926-49573031)
chr4 (8-121)||(4768612-4768725)
chr4 (8-121)||(51426471-51426584)
chr4 (11-121)||(34154431-34154541)
chr4 (8-121)||(955726-955839)
chr4 (8-120)||(37959746-37959858)
chr4 (8-90)||(18578614-18578696)
chr4 (8-121)||(44561356-44561469)
chr4 (12-121)||(49422077-49422181)
chr4 (8-91)||(11494508-11494590)
chr4 (8-86)||(37394217-37394295)
chr4 (8-121)||(958620-958732)
chr4 (11-127)||(4979946-4980062)
chr4 (8-123)||(6283467-6283578)
chr4 (8-86)||(9889963-9890041)
chr4 (8-118)||(44051118-44051228)
chr4 (8-105)||(8109341-8109438)
chr4 (12-121)||(24417446-24417554)
chr4 (8-122)||(51644499-51644614)
chr4 (8-86)||(1044545-1044623)
chr4 (8-110)||(33383750-33383852)
chr4 (8-86)||(50274729-50274807)
chr4 (8-121)||(17139560-17139671)
chr4 (14-91)||(21470867-21470944)
chr4 (8-105)||(56304827-56304923)
chr4 (15-118)||(6280794-6280897)
chr4 (8-62)||(3403840-3403894)
chr4 (61-121)||(44558634-44558694)
chr4 (8-51)||(18581332-18581375)
chr4 (8-86)||(37395217-37395296)
chr4 (8-86)||(56138216-56138299)
chr4 (8-86)||(39588061-39588139)
chr4 (8-86)||(50278824-50278902)
chr4 (39-113)||(51683202-51683276)
chr4 (37-105)||(67575-67643)
chr4 (8-68)||(1041922-1041982)
chr4 (8-92)||(15995685-15995769)
chr4 (15-55)||(17343435-17343475)
chr4 (8-92)||(19069150-19069234)
chr4 (8-55)||(9473687-9473734)
chr4 (8-55)||(17342142-17342189)
chr4 (8-63)||(19994315-19994370)
chr4 (8-55)||(34503709-34503756)
chr4 (12-118)||(38464796-38464901)
chr4 (70-120)||(48256651-48256701)
chr4 (52-121)||(3450084-3450153)
chr4 (13-62)||(6790257-6790306)
chr4 (8-105)||(16984187-16984284)
chr4 (8-53)||(34151616-34151661)
chr4 (73-118)||(46097038-46097083)
chr4 (8-92)||(15999825-15999909)
chr4 (10-54)||(19993043-19993087)
chr4 (11-51)||(24414839-24414879)
chr4 (7-59)||(30042473-30042525)
chr4 (7-51)||(33051678-33051722)
chr4 (12-56)||(36004306-36004350)
chr4 (6-54)||(40334472-40334520)
[»] scaffold0388 (1 HSPs)
scaffold0388 (11-121)||(11739-11849)
[»] chr7 (44 HSPs)
chr7 (8-121)||(9494832-9494945)
chr7 (13-105)||(46860461-46860553)
chr7 (11-118)||(46863373-46863480)
chr7 (8-118)||(30355265-30355375)
chr7 (8-118)||(47060864-47060973)
chr7 (8-112)||(37340245-37340349)
chr7 (8-118)||(36392062-36392172)
chr7 (8-121)||(36186499-36186611)
chr7 (41-121)||(28112776-28112856)
chr7 (7-118)||(21185556-21185667)
chr7 (7-118)||(28980198-28980309)
chr7 (8-118)||(27453620-27453730)
chr7 (8-118)||(48314611-48314720)
chr7 (8-122)||(10705181-10705295)
chr7 (8-118)||(41049215-41049324)
chr7 (8-105)||(47776282-47776379)
chr7 (18-105)||(48316296-48316383)
chr7 (45-114)||(10708333-10708402)
chr7 (8-105)||(45361599-45361696)
chr7 (8-54)||(21188426-21188472)
chr7 (12-118)||(34622436-34622542)
chr7 (9-58)||(40166787-40166836)
chr7 (8-112)||(34623406-34623510)
chr7 (11-118)||(39460490-39460597)
chr7 (40-99)||(42684221-42684280)
chr7 (8-86)||(42499378-42499456)
chr7 (24-118)||(48269618-48269711)
chr7 (8-122)||(10225869-10225984)
chr7 (8-103)||(42681946-42682041)
chr7 (8-58)||(618751-618801)
chr7 (8-118)||(19044231-19044340)
chr7 (8-118)||(20710296-20710405)
chr7 (48-118)||(21190654-21190724)
chr7 (8-86)||(29593354-29593432)
chr7 (8-86)||(34139866-34139944)
chr7 (8-69)||(29592529-29592590)
chr7 (40-105)||(40590549-40590614)
chr7 (8-68)||(11635710-11635770)
chr7 (7-55)||(40142686-40142734)
chr7 (49-91)||(36185800-36185842)
chr7 (8-105)||(34742421-34742518)
chr7 (7-58)||(21799078-21799130)
chr7 (60-112)||(41623893-41623945)
chr7 (37-105)||(48194628-48194696)
[»] chr3 (61 HSPs)
chr3 (8-105)||(28611126-28611223)
chr3 (8-118)||(19454351-19454461)
chr3 (8-113)||(66843-66947)
chr3 (8-121)||(29929360-29929473)
chr3 (8-121)||(29978514-29978627)
chr3 (12-128)||(7247890-7248006)
chr3 (10-112)||(55207691-55207793)
chr3 (8-121)||(45101874-45101987)
chr3 (8-91)||(46344901-46344984)
chr3 (12-118)||(2432973-2433079)
chr3 (8-121)||(29918367-29918480)
chr3 (8-121)||(29967520-29967633)
chr3 (8-129)||(48888667-48888787)
chr3 (8-112)||(19440199-19440303)
chr3 (8-122)||(30256029-30256143)
chr3 (8-118)||(41579750-41579860)
chr3 (8-105)||(41802948-41803045)
chr3 (7-112)||(42804398-42804503)
chr3 (8-92)||(7839525-7839609)
chr3 (6-118)||(55267378-55267490)
chr3 (10-121)||(43571713-43571824)
chr3 (8-118)||(11380378-11380488)
chr3 (12-118)||(41577012-41577118)
chr3 (8-118)||(52567700-52567810)
chr3 (8-105)||(23443132-23443229)
chr3 (8-113)||(42756101-42756206)
chr3 (8-111)||(52570592-52570694)
chr3 (8-118)||(41805701-41805811)
chr3 (8-104)||(49268871-49268967)
chr3 (8-103)||(49196475-49196570)
chr3 (8-106)||(49219817-49219915)
chr3 (12-105)||(34691575-34691668)
chr3 (8-68)||(50216880-50216940)
chr3 (8-112)||(6489276-6489376)
chr3 (37-120)||(42807655-42807738)
chr3 (7-54)||(48892150-48892196)
chr3 (8-118)||(6505977-6506087)
chr3 (8-86)||(41137687-41137765)
chr3 (13-118)||(7837529-7837637)
chr3 (11-56)||(20366191-20366236)
chr3 (8-65)||(34694460-34694517)
chr3 (61-122)||(43568859-43568920)
chr3 (6-58)||(45098829-45098880)
chr3 (8-58)||(2743395-2743445)
chr3 (8-118)||(7841058-7841168)
chr3 (8-54)||(9582548-9582594)
chr3 (8-58)||(13743290-13743340)
chr3 (12-110)||(13896906-13897004)
chr3 (8-86)||(19341620-19341698)
chr3 (8-69)||(14402996-14403057)
chr3 (8-68)||(48250895-48250955)
chr3 (8-62)||(14043924-14043978)
chr3 (8-58)||(24700718-24700768)
chr3 (8-58)||(30252563-30252613)
chr3 (11-57)||(43268373-43268419)
chr3 (8-69)||(4002531-4002591)
chr3 (41-118)||(34722221-34722298)
chr3 (8-60)||(2271339-2271391)
chr3 (8-68)||(16647173-16647233)
chr3 (37-105)||(46993226-46993294)
chr3 (8-68)||(55385124-55385184)
[»] scaffold0618 (1 HSPs)
scaffold0618 (8-91)||(3850-3932)
[»] scaffold0192 (1 HSPs)
scaffold0192 (27-122)||(16345-16439)
[»] scaffold1379 (1 HSPs)
scaffold1379 (12-105)||(464-557)
[»] scaffold0341 (1 HSPs)
scaffold0341 (8-86)||(17377-17455)
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-80)||(232523-232595)
[»] scaffold0219 (2 HSPs)
scaffold0219 (8-54)||(15704-15750)
scaffold0219 (12-105)||(20142-20236)
[»] scaffold0116 (2 HSPs)
scaffold0116 (8-105)||(11251-11348)
scaffold0116 (8-67)||(15981-16040)
[»] scaffold0184 (1 HSPs)
scaffold0184 (8-86)||(18000-18078)
[»] scaffold0078 (1 HSPs)
scaffold0078 (8-86)||(54766-54844)
[»] scaffold0494 (1 HSPs)
scaffold0494 (8-86)||(800-878)
[»] scaffold0201 (1 HSPs)
scaffold0201 (11-69)||(22389-22447)
[»] scaffold0176 (1 HSPs)
scaffold0176 (8-86)||(791-869)
[»] scaffold0340 (1 HSPs)
scaffold0340 (8-105)||(1207-1303)
[»] scaffold0057 (1 HSPs)
scaffold0057 (8-77)||(23253-23322)
[»] scaffold0361 (1 HSPs)
scaffold0361 (15-86)||(4433-4504)
[»] scaffold0360 (1 HSPs)
scaffold0360 (8-103)||(7330-7425)
[»] scaffold1500 (1 HSPs)
scaffold1500 (13-55)||(790-832)
[»] scaffold0260 (1 HSPs)
scaffold0260 (8-58)||(11777-11827)
[»] scaffold0147 (1 HSPs)
scaffold0147 (52-121)||(865-934)
[»] scaffold0169 (1 HSPs)
scaffold0169 (11-43)||(1686-1718)


Alignment Details
Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 26633574 - 26633344
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| ||||||||||||||| |||  |||||||   ||| ||||||||||||||||||||||||||| ||||  |||||||||||| |    
T  26633574 tcggcagttaactgcaaccggtttttgaattcttcggtagttaac---cgagggggcaaaagcgtattttacttgtgtgcctcaaccttatgaaatgtgt 26633478  T
Q  108 caacaataattttca-gaataaatccatggtgcttagctaaaaagatctcattttacatgtctaaacaccgtacatttgatcttgttatcatacaataat 206  Q
    |||||| |||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  26633477 caacaacaatttttaagaataaatccatgatgcttaggtaaaaagatctcattttacatgtctaaacaccgtaaatttgatcttattatcatacaataat 26633378  T
Q  207 agttcttcatcttatatctctttaagaacctatg 240  Q
    |||||||||||||||||||||| |||||||||||    
T  26633377 agttcttcatcttatatctcttcaagaacctatg 26633344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 41804059 - 41804172
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |    
T  41804059 tcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgtgcctcagccttataaaatgtgt 41804158  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  41804159 caacaacaattttc 41804172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 46973251 - 46973138
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||| || ||||||||| |    
T  46973251 tcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttacttgtgtgtctcagcctaatgaaatgtgt 46973152  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  46973151 caacaacaattttc 46973138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 19054101 - 19053993
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaaca 112  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||||||| |||| |||||| |||||||||||| ||||||    
T  19054101 agttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgtcaaca 19054002  T
Q  113 ataattttc 121  Q
    | |||||||    
T  19054001 acaattttc 19053993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 13173882 - 13173769
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||| |||||||||||||||||||||||||||  | |||||||||||||| |||||||||  |||||||||||||||| ||||| |||||||||||| |    
T  13173882 tcggctgttaactgcagccggtttttgaattcccag-cagttaactgccgagggggcaaaatagtattttacttgtgtgcctcagccttatgaaatgtgt 13173784  T
Q  108 caacaataattttca 122  Q
    |||||| ||||||||    
T  13173783 caacaacaattttca 13173769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 36076584 - 36076697
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||||||||||||||   ||||||| ||||||||| |||| |||||||||||||||| |||||| |||||||||||| |    
T  36076584 tcggcagttaactgcagccggtttttgaattcctcggtggttaactaccgaaggggtaaaa-cgtattttacttgtgtttctcagccttatgaaatgtgt 36076682  T
Q  108 caacaataattttca 122  Q
    |||||  ||||||||    
T  36076683 caacagcaattttca 36076697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 36908625 - 36908512
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||  |||||||||||||||| ||||  ||||| |||||| |    
T  36908625 tcggcagttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgtgt 36908526  T
Q  108 caacaataattttc 121  Q
    |||||  |||||||    
T  36908525 caacatcaattttc 36908512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 13972109 - 13972001
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||| ||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| |    
T  13972109 tcggctgttaactgcagccagttttt-aattcctcggcagt-aactgccgaaggggcaaaaacgtattttacttgtgtttctcagccttatgaaatgtgt 13972012  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  13972011 caacaacaatt 13972001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 35521654 - 35521548
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaat 114  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||  |||||||| ||||||||||||||||| ||||| ||||| |||||| |||||||     
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaac 35521555  T
Q  115 aattttc 121  Q
    |||||||    
T  35521554 aattttc 35521548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 46141829 - 46141719
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||  |||||||| ||||||||||||||||  ||||| |||||| ||| | |    
T  46141829 tcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtacctcagccttatgcaatatgt 46141730  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  46141729 caacaacaatt 46141719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 27485106 - 27485009
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||| |||| ||||||| | |||||||||||||| ||||||||| ||||||||||| |||| |||||| ||||| ||||||    
T  27485106 tcggcagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaatgt 27485009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 4516078 - 4515956
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgcc-----gaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaa 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||     || ||| ||||| ||||||||||||||||| ||||  || ||||||    
T  4516078 tcggcagttaactgcagccggtttttgaattcctcggcagttaactgccctgccgaggggacaaaatcgtattttacttgtgtgcctcaccctaatgaaa 4515979  T
Q  103 tgtatcaacaataattttcagaa 125  Q
    ||| |||| |  |||||||||||    
T  4515978 tgtgtcaaaagcaattttcagaa 4515956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 49924903 - 49924793
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||| ||||||||||||||||  ||| ||||||| |||||||||||||||| ||||  ||||| ||||| ||||| |||||| ||||| |    
T  49924903 tcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaattactcgtgtgcctcagccttatgcaatgtgt 49924804  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  49924803 caacaacaatt 49924793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 6437570 - 6437675
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaaca 112  Q
    |||||||||||| || || |||| ||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||  ||||| ||||| ||||||    
T  6437570 agttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtattttacttgtgtgcctcagctttatgcaatgtgtcaaca 6437669  T
Q  113 ataatt 118  Q
    | ||||    
T  6437670 acaatt 6437675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 23276134 - 23276230
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatg 104  Q
    |||||||||||||| |||||| |||| ||||||||  |||||||||||||| ||||||||| ||||||||||| |||| |||||| ||||| |||||    
T  23276134 tcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaatg 23276230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 35258904 - 35258995
Alignment:
Q  14 gttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||| | |||    ||||||||||||||||||||||| ||||||||||||    
T  35258904 gttaactgcagccggatttttaattcctcggcagttaactgccgaatgagcatttacgtattttacttgtgtgtctcagccttatgaaatgt 35258995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 19499138 - 19499233
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||  |||| |||| |||  |||||||||| |||  |||||||| ||||||||||||||||||||||||||||||| ||||    
T  19499138 tcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcga--gggcaaaaacgtattttacttgtgtgtctcagtcttatgatatgt 19499233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 49927539 - 49927649
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||  ||||||||||| ||||| ||| |||||||||||||| ||| ||||| ||||||||||| |||| |||| | | |||||||||| |    
T  49927539 tcggcagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttactcgtgtttctcggccatatgaaatgtgt 49927638  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  49927639 caacaacaatt 49927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 14172156 - 14172048
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaaca 112  Q
    |||||| |||||||| ||||| ||| |||||  || ||| |||||| |||||||||||||||||||||||||||  |||| |||||| ||||| ||||||    
T  14172156 agttaattgcagccgatttttaaatccctcggtagctaagtgccgagggggcaaaagcgtattttacttgtgtgcttcagccttatggaatgtgtcaaca 14172057  T
Q  113 ataattttc 121  Q
    | |||||||    
T  14172056 acaattttc 14172048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 25040109 - 25040205
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    ||||||| ||||||||||  |||| ||||||||||||||||||||||| |||||  |||||||||||||||| ||| |  ||||||||||| |||||    
T  25040109 ttaactgaagccggttttaaaatttctcgacagttaactgccgaagggacaaaattgtattttacttgtgtgcctcggctttatgaaatgtgtcaac 25040205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 18975149 - 18975256
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||| || ||| || |||||||||||||||||| ||||| ||||||||| ||||||||||||||||  |||||  ||||  ||||| ||||    
T  18975149 gcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattttacttgtgtacctcagctttatacaatgtgtcaa 18975248  T
Q  111 caataatt 118  Q
    ||| ||||    
T  18975249 caacaatt 18975256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 38689976 - 38689866
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatca 109  Q
    ||||||||||||||||||||||  ||||||||||||| |||||| |||| |||| ||||||||||||||||  |||| | |||  ||||| ||||| |||    
T  38689976 ggcagttaactgcagccggtttc-gaattcctcgacatttaactaccgagggggtaaaagcgtattttactcatgtgacacagctttatgcaatgtgtca 38689878  T
Q  110 acaataattttc 121  Q
    |||| |||||||    
T  38689877 acaacaattttc 38689866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 6562187 - 6562265
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||||| |||| |||| ||||||||||| |||||    
T  6562187 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtg 6562265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 11183233 - 11183123
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||| |||| ||||||||  |||||||||| | | || |||||| ||||||||||| || | |||||| ||||| |||||| |    
T  11183233 tcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaagggagcaaaaacgtattttactcgtatttctcagccttatcaaatgtgt 11183134  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  11183133 caacaacaatt 11183123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 19495113 - 19495019
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||| ||||||||| || || ||||||||| || ||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  19495113 tcggcagttaactgcagccggattttgaatttcttgatagttaactgtcg-aggggcaaaagtgtattttact--tgtgtctcagccttatgacatgt 19495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 35527043 - 35527141
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||| |||||||| ||| ||| || ||||||||| |   ||||||| ||||||||||||||||| ||||| |||||||||||| ||||    
T  35527043 cagttaactgcagcctgtttttgatttcttcggcaattaactgccaagaaggcaaaaacgtattttacttgtgtgcctcagccttatgaaatgtgtcaa 35527141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 29435020 - 29434923
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||| |||||||||||| ||||| |||||||| |||| ||||||||||| |  ||| |||| ||||||||| | ||||||||||||||||| ||||||    
T  29435020 tcggaagttaactgcagtcggttattgaattcttcgaaagttaactgccaagagggtaaaaacgtattttattcgtgtgtctcagtcttattaaatgt 29434923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 48751436 - 48751533
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||| |||||||||||||| |||| ||||||||| ||||| | |||||| |||| |||| ||||||||||| |||| |||||| ||||| ||||||    
T  48751436 tcggcaattaactgcagccggatttttaattcctcggcagttcagtgccgagggggtaaaatcgtattttactagtgtttctcagccttatcaaatgt 48751533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 29261462 - 29261349
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    |||||||||||| |||||||| ||||  |||| ||| ||||||||||||||| | ||||||| |||||||||||| ||||  || | ||||||||| ||     
T  29261462 ttcggcagttaattgcagccgattttacaatttctctacagttaactgccgaggaggcaaaaacgtattttacttctgtgcatc-gccttatgaaacgtg 29261364  T
Q  107 tcaacaataattttc 121  Q
    ||||||| |||||||    
T  29261363 tcaacaacaattttc 29261349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 51666668 - 51666777
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||||| |||  ||||| |||| || ||||||||||| ||||||||||||||||||||| ||||| | |||  ||||| ||||| ||||    
T  51666668 gcagttaactgcagccgatttc-gaattactcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagctttatgcaatgtgtcaa 51666766  T
Q  111 caataattttc 121  Q
    ||  |||||||    
T  51666767 catcaattttc 51666777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 21944414 - 21944519
Alignment:
Q  16 taactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaata 115  Q
    |||||||||||||||||| |||| ||||||||||| ||  ||| |||  |||| ||||||||| || |||||| ||| ||||||| |||| ||||||| |    
T  21944414 taactgcagccggtttttaaatttctcgacagttatctatcgaggggataaaaacgtattttatttatgtgtcccagccttatgatatgtgtcaacaaca 21944513  T
Q  116 attttc 121  Q
    ||||||    
T  21944514 attttc 21944519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 49857875 - 49857985
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||| | ||||| ||||| ||| |||||||||||||| ||||||    |||||||||||  |||||||||  ||||| |||||| |    
T  49857875 tcggcagttaactgcagctgatttttaaattcatcggcagttaactgccgagggggcatttacgtattttact--tgtgtctcaaccttataaaatgtgt 49857972  T
Q  108 caacaataatttt 120  Q
    |||||| ||||||    
T  49857973 caacaacaatttt 49857985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 30910029 - 30910113
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcag 92  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||| |||| |   | ||| ||||||||||| ||||||    
T  30910029 tcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagggggtatttgggtaatttacttgtgtttctcag 30910113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 9711677 - 9711755
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||||||||||||  |||| |||  ||||||||| ||||||||||| || ||||||||| ||||||||||| |||||    
T  9711677 tcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatggggcaaaatcgtattttactagtgtg 9711755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 27115848 - 27115898
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccg 57  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  27115848 ttcggcagttaactgcagccggtttttaaattcctcggcaattaactgccg 27115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 30905818 - 30905740
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  |||| |||| |||||||||||||| |||  |||| ||||||||||| |||||    
T  30905818 tcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgaggggataaaatcgtattttactggtgtg 30905740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 51289986 - 51290076
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttat 98  Q
    |||||||||||||||| |||| |||| ||||||||   ||||||||||||| |||| |||| | ||||||||| |||| |||||| |||||    
T  51289986 tcggcagttaactgcaaccggatttttaattcctcagtagttaactgccgagggggtaaaatcttattttactagtgtttctcagccttat 51290076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 13178161 - 13178230
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttact 80  Q
    ||||||||||||||| ||||||| |||| |||  |||||||||||||| || |||||| |||||||||||    
T  13178161 gcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaaacgtattttact 13178230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 14174911 - 14174952
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagtt 49  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  14174911 tcggcagttaactgcagccgatttttgaattcctcgacagtt 14174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 23272895 - 23272786
Alignment:
Q  9 cggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatc 108  Q
    ||||||||||||||||| || | || ||||||||| |||||||||| ||| |||  |||| ||||||||||| || | |||||  ||||| ||||||||     
T  23272895 cggcagttaactgcagctggatatttaattcctcggcagttaactggcgaggggaaaaaaacgtattttactcgtatttctcatccttatcaaatgtatg 23272796  T
Q  109 aacaataatt 118  Q
    ||||| ||||    
T  23272795 aacaacaatt 23272786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 52802177 - 52802100
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgt 85  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||  ||||||||  |||  ||||||||||    
T  52802177 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaaaagtaaattacttgtgt 52802100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 51337543 - 51337587
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgcc 56  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  51337543 cagttaactgcagccggttttttaattcctcggcagttaactgcc 51337587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 5077988 - 5077910
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||| ||| |||  |||| |||  |||||||||||||| |||| |||| ||||||||||| |||||    
T  5077988 tcggcagttaactgcagtcggatttcaaatttctcagcagttaactgccgagggggtaaaatcgtattttactggtgtg 5077910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 15047329 - 15047279
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  15047329 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 15047279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 44336296 - 44336242
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggg 62  Q
    ||||||||||||||||||||  |||  ||||||||||||||||||||| ||||||    
T  44336296 tcggcagttaactgcagccgaatttctaattcctcgacagttaactgctgaaggg 44336242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 44470037 - 44470087
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  44470037 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 44470087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 23359375 - 23359436
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaag 69  Q
    |||| |||||||||||||||| |||  ||||||||| || ||||||||||| ||||||||||    
T  23359375 tcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgagggggcaaaag 23359436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 51288931 - 51288874
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||||||||||||||| |||  |||||||||  ||||||||||||| |||||||||    
T  51288931 gcagttaactgcagccggatttctaattcctcggtagttaactgccgagggggcaaaa 51288874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 1872105 - 1872045
Alignment:
Q  58 aaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    ||||||||||||| ||||||||| ||||| ||||| |||||| ||||| ||||||| ||||    
T  1872105 aaggggcaaaagcatattttactcgtgtgcctcagccttatgcaatgtgtcaacaacaatt 1872045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 22345309 - 22345258
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  22345309 tttcggcagttaactgcagccgg-tttcaaattcctcggcagttaactgccga 22345258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 42570157 - 42570077
Alignment:
Q  40 ctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatttt 120  Q
    ||||||||||||||| ||| |  | |||| ||| ||||||||||||| ||||| ||||||||| || ||||||| ||||||    
T  42570157 ctcgacagttaactgtcgaggatgtaaaatcgtgttttacttgtgtgcctcagccttatgaaacgtgtcaacaacaatttt 42570077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 44465643 - 44465571
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttact 80  Q
    |||||||| ||||||||||||  ||  |||||||||  ||||||||||||| |||| |||| |||||||||||    
T  44465643 tcggcagtaaactgcagccggaattcaaattcctcggtagttaactgccgagggggtaaaatcgtattttact 44465571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 3941176 - 3941223
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||    
T  3941176 tcggtagttaactgcagccagtttatgaattcctcggcagttaactgc 3941223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 6557962 - 6557907
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaagggg 63  Q
    ||||||||||||||||||||  |||  ||||||||| |||||||||||||| ||||    
T  6557962 tcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccgaggggg 6557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 23913901 - 23913826
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||  ||  |||||||||  |||||||||| || |||| |||| ||||||||||| |||||    
T  23913901 gcagttaactgcagccggaattcaaattcctcggtagttaactgctgagggggtaaaatcgtattttactagtgtg 23913826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 29352306 - 29352255
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaa 59  Q
    |||||||||||||| |||||| |||  |||||||||||| ||||||||||||    
T  29352306 tcggcagttaactggagccggatttcaaattcctcgacaattaactgccgaa 29352255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 45943752 - 45943799
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||| |||||||| |||||||||| |||||||||||||| ||||||||    
T  45943752 tcggtagttaactacagccggtttatgaattcctcgacaattaactgc 45943799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 46044752 - 46044799
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||| ||||||||||||||||||| ||||||| ||| |||||||||||    
T  46044752 tcggtagttaactgcagccggtttatgaattcttcggcagttaactgc 46044799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 1656161 - 1656223
Alignment:
Q  59 aggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttc 121  Q
    |||||||||| | ||||||||| |||| |||||  |||||||||||| ||||||| |||||||    
T  1656161 aggggcaaaaacatattttactcgtgtttctcaaccttatgaaatgtgtcaacaacaattttc 1656223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 20349504 - 20349454
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  |||||||||  |||||||||||||    
T  20349504 tcggcagttaactgcagccggatttcaaattcctcggtagttaactgccga 20349454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 37014969 - 37014919
Alignment:
Q  36 attcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||||| |||||||||| ||| ||||||||| ||||||||||| |||||    
T  37014969 attcctcggcagttaactgtcgagggggcaaaatcgtattttactagtgtg 37014919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 41453885 - 41453835
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||| ||||    
T  41453885 tcggcagttaactgcagccggatttcaaattcctcggcagttaactaccga 41453835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 29438046 - 29438111
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgta 73  Q
    |||| ||||||||||||||||||||| |||   ||  |||||||||||||| ||||||||| ||||    
T  29438046 tcggtagttaactgcagccggttttttaatatttctgcagttaactgccgagggggcaaaaacgta 29438111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 35255866 - 35255813
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggca 65  Q
    ||||||| |||||||| || || |||||||||||||||||||||| | ||||||    
T  35255866 cagttaattgcagccgattctttaattcctcgacagttaactgccaagggggca 35255813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 36911694 - 36911799
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||| |||||| ||| || ||||||||||| ||| ||||  |||||||| |   ||||| |||||||||||| |  | ||||| ||||||||||||    
T  36911694 tttcggcaattaactacagtcgatttttgaattcttcggcagt--actgccgaggaaacaaaaacgtattttacttatccgcctcagccttatgaaatgt 36911791  T
Q  106 atcaacaa 113  Q
     |||||||    
T  36911792 gtcaacaa 36911799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 52805559 - 52805619
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||| |||||| ||||||| |||  ||||| ||| |||||||||||||| |||||||||    
T  52805559 tcggcaattaactacagccggatttcaaattcgtcggcagttaactgccgagggggcaaaa 52805619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 18538361 - 18538474
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||| || ||||||||| |    
T  18538361 tcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttacttgtgtgcctcagcctaatgaaatgtgt 18538460  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  18538461 caacaacaattttc 18538474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 34682304 - 34682191
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||||||||||   ||||| |||||||||||| |    
T  34682304 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttacttgtgaacctcagccttatgaaatgtgt 34682205  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  34682204 caacaacaattttc 34682191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 18310045 - 18310157
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| || | ||||||| ||||||||||||||||| ||||| |||||| |||||    
T  18310045 tttcggcagttaactgcagtcggttattgaattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgt 18310144  T
Q  106 atcaacaataatt 118  Q
     ||||||| ||||    
T  18310145 gtcaacaacaatt 18310157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 20192400 - 20192290
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| || |||||||| ||  |||||||||| ||||||||||||| ||||||||||||||||| ||||| |||||||||||| |    
T  20192400 tcggcagttaactgcagccgattattgaattcttcagcagttaactgacgaaggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgt 20192301  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  20192300 caacaacaatt 20192290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 25499913 - 25500029
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgt--gtctcagtcttatgaaatgt 105  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  | ||||| |||||| |||||    
T  25499913 tcggcagttaaccgcaaccggtttttgaattcctcgatagttaactgccgagggggcaaaagcgtattttacttgtgttcgcctcagccttatgtaatgt 25500012  T
Q  106 atcaacaataattttca 122  Q
     ||||||  ||||||||    
T  25500013 gtcaacaccaattttca 25500029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 19228672 - 19228786
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| ||||||||| ||||| ||| |||||||||||||| ||||||    ||||||||||||||||||||||| ||||| |||||| |    
T  19228672 tcggcagttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagccttatcaaatgtgt 19228771  T
Q  108 caacaataattttca 122  Q
    |||||| ||||||||    
T  19228772 caacaacaattttca 19228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 1398645 - 1398532
Alignment:
Q  14 gttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaa 113  Q
    |||||||||| |||||| |||||||||||| |||||||||| |||||| ||||||| ||||||||||| |||||||||  |||||| ||||| |||||||    
T  1398645 gttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggagcaaaagtgtattttacttctgtgtctcaaccttatgtaatgtgtcaacaa 1398546  T
Q  114 taattttcagaata 127  Q
     |||||||| ||||    
T  1398545 caattttcaaaata 1398532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 18307301 - 18307198
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||||| || | ||||| ||||||||||||| |    
T  18307301 tcggcagttaactacagccgattttttaattcctcgacagttaactgccgaaggagcaaaaacgtattttactcgtatttctca-tcttatgaaatgtgt 18307203  T
Q  108 caaca 112  Q
    |||||    
T  18307202 caaca 18307198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 20200174 - 20200284
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||  |||| ||||||| || |||||||||||||||| ||||||||| ||||||||| ||||||| ||||| |||||| ||||| |    
T  20200174 tcggcagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttatttgtgtgcctcagccttatgcaatgtgt 20200273  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  20200274 caacaacaatt 20200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 34122571 - 34122499
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttact 80  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| |||||||||||    
T  34122571 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtattttact 34122499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 38968142 - 38968039
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||| ||||  ||||||||  |||||||| |||||||  ||||| |||||||||||| ||| | |||| ||||||||||||||    
T  38968142 tcggcagttaactgcagccggattttttattcctcggtagttaactaccgaaggatcaaaaacgtattttacttatgtttttcagccttatgaaatgtat 38968043  T
Q  108 caac 111  Q
    ||||    
T  38968042 caac 38968039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 3603174 - 3603284
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||| |||||||||||||| ||| |||||||| ||| |||||||||| ||| || |||||| |||||||||||| |||| ||||| |||||| ||||| |    
T  3603174 tcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattttacttatgtgcctcagccttatgcaatgtgt 3603273  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  3603274 caacaacaatt 3603284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 33993326 - 33993225
Alignment:
Q  9 cggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatc 108  Q
    |||||||||||| |||||||||||||||||  ||| ||||||||| |||| ||||||||| ||||||||||| || | |||||  |||||||||||| ||    
T  33993326 cggcagttaactacagccggtttttgaatttttcggcagttaacttccgagggggcaaaaacgtattttactcgtatttctcaaccttatgaaatgtgtc 33993227  T
Q  109 aa 110  Q
    ||    
T  33993226 aa 33993225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 41201775 - 41201678
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| || |||  || ||||| ||||||||||| ||||| ||||| |||||| |||||    
T  41201775 tcggcagttaactgcagccggttattgaattcctcgacaattaattgtcgagaggacaaaatcgtattttactcgtgtgcctcagccttatgtaatgt 41201678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 34123963 - 34124039
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  34123963 ggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttactggtgtg 34124039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 17966912 - 17967009
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||| |||||||||||| ||| |||| |||| |||| |||||||||||||| |||| |||| ||||||||||| |||| |||||| ||||| ||||||    
T  17966912 tcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaatcgtattttactagtgtttctcagccttatcaaatgt 17967009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 42539399 - 42539503
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||  |||| |||| ||||||||||| || || ||||||||||| |||||||||||  ||||| ||||||| |  |||||| |    
T  42539399 tcggcagttaactgcagccgaatttttaatttctcgacagttagctacctaaggggcaaaaacgtattttactcatgtgtatcagtctaaccaaatgtgt 42539498  T
Q  108 caaca 112  Q
    |||||    
T  42539499 caaca 42539503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 35567058 - 35567156
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    ||||||||||| ||||| ||   |||||||||||||||||||||||  | |||||| | ||||||||||||||| ||||| || ||||||||| |||||    
T  35567058 agttaactgcaaccggtattaacattcctcgacagttaactgccgagagagcaaaaacatattttacttgtgtgcctcagcctgatgaaatgtgtcaac 35567156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 3600382 - 3600273
Alignment:
Q  10 ggcagttaactgcagccggtttttg-aattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatc 108  Q
    |||||||||||||||| |||| ||  ||||  ||| |||||||||||||| ||||||||| | ||||||||||||||| ||||   ||||||||||| ||    
T  3600382 ggcagttaactgcagctggttattataattattcggcagttaactgccgagggggcaaaaacatattttacttgtgtggctcaactttatgaaatgtgtc 3600283  T
Q  109 aacaataatt 118  Q
    ||||| ||||    
T  3600282 aacaacaatt 3600273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 24053227 - 24053114
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||| ||||||||||||| |||| || |||||||||||  |  ||||| ||||||||| || ||||||||   ||||| | |||| |    
T  24053227 tcggcagttaactgcagacggtttttgaattactcggcatttaactgccgagagaacaaaaacgtattttatttatgtgtctcgaccttatcatatgtgt 24053128  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  24053127 caacaacaattttc 24053114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 1401428 - 1401476
Alignment:
Q  65 aaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaa 113  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  1401428 aaaagcgtattttacttgtgtgtctcagccttatgaaatgtgtcaacaa 1401476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 31094610 - 31094500
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    |||||||||||||||||||||||||   | |||| |||||||||||| |||| |||||||||  |||  ||||| ||||| || || |||||| ||||||    
T  31094610 ttcggcagttaactgcagccggtttca-atttccccgacagttaactaccgagggggcaaaaatgtaaattactcgtgtgcctaagccttatgcaatgta 31094512  T
Q  107 tcaacaataatt 118  Q
    ||||||| ||||    
T  31094511 tcaacaacaatt 31094500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 41798866 - 41798787
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||||||||||||||||||| |||  ||||| ||  |||||||||||||| ||||||||| | ||||||||| |||||    
T  41798866 ttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggggcaaaatcatattttactagtgtg 41798787  T

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Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 8702227 - 8702301
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgt 85  Q
    |||||||||||||| | | |||| ||||||||| |||||||||| ||| || |||||| ||||||||||||||||    
T  8702227 gcagttaactgcagtcagatttttaattcctcggcagttaactgtcgagggagcaaaatcgtattttacttgtgt 8702301  T

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Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 17965896 - 17965806
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttat 98  Q
    ||||||||||||||||| ||  |||| |||||||||||| ||||||||||| |||  |||| ||||||||||| |||  |||||| |||||    
T  17965896 tcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgaggggataaaatcgtattttactagtgattctcagccttat 17965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 25877668 - 25877559
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| ||||||||||||  |||||||||| || |||| |||||||| || |||| ||||||||||| ||||| | ||  |||||| ||||| |    
T  25877668 tcggcagttaattgcagccggtttc-gaattcctcggcatttaattgccgaagtggtaaaaacgtattttactcgtgtgacacaaccttatgcaatgtgt 25877570  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  25877569 caacaacaatt 25877559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 27867846 - 27867924
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||||| ||||||||||||  ||  ||||||||| |||||||||||||| |||| |||| ||||||||||| |||||    
T  27867846 tcggcagtaaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtg 27867924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 33995174 - 33995288
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| |||| ||| |||||||||| |||| |||||||||| ||| |||  ||||  |||||||||||||||| ||||  ||||| |||| | |    
T  33995174 tcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggggataaaattgtattttacttgtgtgcctcaaccttataaaatatgt 33995273  T
Q  108 caacaataattttca 122  Q
    |||||| || |||||    
T  33995274 caacaacaactttca 33995288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 30354426 - 30354511
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtctta 97  Q
    |||||||||||| || ||||||||||| |||||||||||| |||  | |||| ||   ||||||||||||||||||||||| ||||    
T  30354426 cagttaactgcaaccagtttttgaatttctcgacagttaaatgctaagggggtaattacgtattttacttgtgtgtctcagcctta 30354511  T

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Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 39743174 - 39743271
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||| ||  |||  ||||||||| |||||||||| ||| ||||||||| | ||||||||| ||||| | ||| ||||| ||||||    
T  39743174 tcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgagggggcaaaatcatattttactagtgtggcacagccttatcaaatgt 39743271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 42942477 - 42942574
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||| ||| || ||||||  ||  | ||| |||||||||||| | |||| ||||||||||||||||||||| |||||| ||||| ||||||    
T  42942477 tcggcagttaattgccgctggttttctaaaacttcggcagttaactgccaagggggtaaaagcgtattttacttgtgtttctcagccttatcaaatgt 42942574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 1397376 - 1397436
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    ||||||||||||||||||||| |||  ||||||||  |||||||||||||| |||||||||    
T  1397376 tcggcagttaactgcagccggatttctaattcctcagcagttaactgccgagggggcaaaa 1397436  T

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Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 7796696 - 7796604
Alignment:
Q  20 tgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaaca 112  Q
    ||||||||||||||||||| |||| ||| |||||||| | ||||||||| ||||  ||||| ||||| ||||| || ||| ||||| ||||||    
T  7796696 tgcagccggtttttgaattactcggcagataactgccaagggggcaaaaacgtaaattactcgtgtgcctcagcctaatgcaatgtgtcaaca 7796604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 42537217 - 42537138
Alignment:
Q  39 cctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    ||||| |||||||||||||| |||||||||  |||||||||| |||| |||||| ||||| |||||| | ||||| ||||    
T  42537217 cctcggcagttaactgccgatggggcaaaaatgtattttactcgtgtttctcagccttatcaaatgtgtgaacaacaatt 42537138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 540977 - 540911
Alignment:
Q  37 ttcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaat 103  Q
    |||||||||||||||||||||| | ||| ||| ||||||||||| |||| |||||| ||||| ||||    
T  540977 ttcctcgacagttaactgccgaggaggctaaatcgtattttactagtgtttctcagccttatcaaat 540911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 542816 - 542866
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    |||||||||| |||||||||| |||  ||||||||||||||||||||||||    
T  542816 tcggcagttagctgcagccggatttctaattcctcgacagttaactgccga 542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 28387316 - 28387238
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||| ||||||||||||||  ||  ||||||||| |||||||||| ||| |||| |||| ||||||||||| |||||    
T  28387316 tcggcaattaactgcagccggaattcaaattcctcggcagttaactgtcgagggggtaaaatcgtattttactagtgtg 28387238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 42865804 - 42865906
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||| ||||||||| ||||||||||||||| ||| | |||||||||||| || | |||| | ||||||||| |||| | | || | |||||||||| |    
T  42865804 tcggcaattaactgcaaccggtttttgaattcttcgtcggttaactgccgagggagaaaaaacttattttactcgtgtttttaagccatatgaaatgtgt 42865903  T
Q  108 caa 110  Q
    |||    
T  42865904 caa 42865906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 42937240 - 42937142
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||| |||||||||   |  | ||| |||||||| ||||| |||  |||| ||||||||||||||||| ||||| |||||| |||||    
T  42937240 ttcggcagttaactgccgccggttttcttaaacttcggcagttaaccgccgatgggataaaaacgtattttacttgtgtgcctcagccttatgcaatgt 42937142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 13568101 - 13568198
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||| |||| |||| |||| |||  |||||| || || | ||| |||||| |||||    
T  13568101 tcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgatggggtaaaaacgtcatttactcgtatggcacagccttatgtaatgt 13568198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 28388545 - 28388606
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaag 69  Q
    |||||||||||||||||| || |||  ||||||||| ||| |||||||||| ||||||||||    
T  28388545 tcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaag 28388606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 41799793 - 41799890
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||  | |||  ||||||||  |||||||||| ||| |||||||||  |||  ||||| ||||||| ||||||||| ||||||    
T  41799793 tcggcagttaactgcagctagatttctaattcctcagcagttaactgtcgagggggcaaaaaagtaaattactcgtgtgtcacagtcttatcaaatgt 41799890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 4434330 - 4434374
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactg 54  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||    
T  4434330 ggcagttaactgcagccggttttggacttcctcggcagttaactg 4434374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 24050071 - 24050035
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacag 47  Q
    |||||||| ||||||||||||||||||||||||||||    
T  24050071 gcagttaagtgcagccggtttttgaattcctcgacag 24050035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 25897107 - 25897183
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||||||||||||||||  ||  |||||||||  |||||||||||||||||| ||||   ||||||||| |||||    
T  25897107 ggcagttaactgcagccggagttcaaattcctcggtagttaactgccgaaggggtaaaataatattttactagtgtg 25897183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 7801020 - 7801063
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||    
T  7801020 ttaactgcagccgatttttgaattccacgacagttaactaccga 7801063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 25497558 - 25497520
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgaca 46  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  25497558 tcggcagttaactgcagccaatttttgaattcctcgaca 25497520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 7757372 - 7757275
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||| |||  ||  | ||| |||||||||| ||| ||||||||| |||  |||||| ||||| |  ||||||||| |||||    
T  7757372 tcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgagggggcaaaaacgtcatttactcgtgtggcatagtcttatgtaatgt 7757275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 26366870 - 26366825
Alignment:
Q  73 attttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    |||||||| ||||||||||| |||||| ||||||||||||| ||||    
T  26366870 attttactcgtgtgtctcagccttatgcaatgtatcaacaacaatt 26366825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 30611261 - 30611176
Alignment:
Q  33 tgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    |||||| ||||  ||||||||||| | ||||||||| || |||||||| |||| |||||| ||||| |||||| | ||||| ||||    
T  30611261 tgaattgctcggtagttaactgccaagggggcaaaaacgaattttactcgtgtttctcagccttatcaaatgtgtgaacaacaatt 30611176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 18438681 - 18438571
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||| |    
T  18438681 tcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattttacttgtgtgcatcagccttatgcaatgtgt 18438582  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  18438581 caacaacaatt 18438571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 41858147 - 41858266
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||| |||| |||||| | |||||||||| |    
T  41858147 tcggcagttaactgcagccggtttttgaattcttcgccagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatgaaatgtgt 41858246  T
Q  108 caacaataattttcagaata 127  Q
    |||||| |||| ||| ||||    
T  41858247 caacaacaattctcaaaata 41858266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 7168135 - 7168022
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||| | ||| ||||||||| ||||||||||||||||| ||||| |||||||||||| |    
T  7168135 tcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgt 7168036  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  7168035 caacaacaattttc 7168022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 18441467 - 18441577
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||| ||  ||||| ||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |    
T  18441467 tcggcagttaactacaatcggttattgaatttctcggcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgaaatgtgt 18441566  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  18441567 caacaacaatt 18441577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 41855415 - 41855310
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| | ||||||| |||||||||||  ||| |||||| | |||||||||| |    
T  41855415 tcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtattttactcatgtttctcagccatatgaaatgtgt 41855316  T
Q  108 caacaa 113  Q
    ||||||    
T  41855315 caacaa 41855310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 35389555 - 35389445
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||| ||||| ||||||| ||||  ||||| || |||||||| |||||| ||||| |    
T  35389555 tcggcagttaactgcagctggtttttgaatttctcggcagttaactgtcgaagaggcaaaaacgtaaattactcgtatgtctcagccttatgcaatgtgt 35389456  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  35389455 caacaacaatt 35389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 4866481 - 4866369
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||| |||| |||   ||||||||||| ||||||||||| ||||||| |||| |    
T  4866481 tcggtagttaactgcagccggtttttgaatttcttgacagttaactgccg-agggacaatttcgtattttactcgtgtgtctcagccttatgatatgtgt 4866383  T
Q  108 caacaataattttc 121  Q
     ||||| |||||||    
T  4866382 gaacaacaattttc 4866369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 38871844 - 38871738
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatca 109  Q
    ||||||||||||||  || ||| |||||||||||||| |||||| || | |  |||||| ||||||||||||||||| |||| ||||||||||||| |||    
T  38871844 ggcagttaactgcaatcgatttatgaattcctcgacaattaactaccaatgaagcaaaaacgtattttacttgtgtgcctcaatcttatgaaatgtgtca 38871745  T
Q  110 acaataa 116  Q
    |||||||    
T  38871744 acaataa 38871738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 18205831 - 18205738
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaat 103  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||| | || |||| ||||||||||| |||| |||||| ||||| ||||    
T  18205831 ggcagttaactgcagccggtttttgaattcttcggcagttaaccgccgaggtggtaaaaacgtattttactcgtgtttctcagccttataaaat 18205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 45454453 - 45454356
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||| |||| |||  ||||||||| |||||||||||||| | ||||||| ||||||||||| ||||| | ||||||||| ||||||    
T  45454453 tcggcagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttactagtgtgccacagtcttatcaaatgt 45454356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 3395939 - 3395837
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||  |  ||||| ||||||||| ||||||||||| || ||||||||| | ||||||||||||||| ||||  |||||||||||| |    
T  3395939 tcggcagttaactgcaatcaatttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctcaaccttatgaaatgtgt 3395840  T
Q  108 caa 110  Q
    |||    
T  3395839 caa 3395837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 43188121 - 43188023
Alignment:
Q  8 tcggcagttaactgc-agccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||| | |||||| |||| |||||||||||| ||||||| ||| ||||||||| ||||||||||| |||| |||||| ||||| ||||||    
T  43188121 tcggcagttaactaccagccggatttttaattcctcgacaattaactgtcgagggggcaaaatcgtattttactcgtgtttctcagccttatcaaatgt 43188023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 42602507 - 42602402
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||||||  |  |||||  |||||||||| |||| |||||| | ||||||| || |    
T  42602507 tcggcagttaactgcatccggtttttgaattcttcggcagttaactgccgatagaacaaaaatgtattttactcgtgtttctcagccatatgaaacgtgt 42602408  T
Q  108 caacaa 113  Q
    ||||||    
T  42602407 caacaa 42602402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 35962354 - 35962282
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttact 80  Q
    |||||||||||||| |||||| |||  ||||||||||||||||||||||||  |||||||| |||||||||||    
T  35962354 tcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtattttact 35962282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 42605260 - 42605320
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||    
T  42605260 tcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagggggtaaaa 42605320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 1114790 - 1114712
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  |||| |||| |||||||||||||| |||| |||| ||||||||||| |||||    
T  1114790 tcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtattttactggtgtg 1114712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 40077276 - 40077386
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||| ||| |||| ||| ||| ||||||| || |  || ||||||||| ||||||||||| |||| |||||| ||||| |||||| |    
T  40077276 tcggcagttaactgcagtcggatttttaataccttgacagtttaccgttgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaatgtgt 40077375  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  40077376 caacaacaatt 40077386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 22577708 - 22577607
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    |||||||||||| ||  ||||||||||||||  || ||||||||||| ||  ||||| ||||||||| |||||||| || | ||| ||||||||||||||    
T  22577708 cagttaactgcaaccaatttttgaattcctcagcaattaactgccgagggaacaaaaacgtattttatttgtgtgtatctgccttgtgaaatgtatcaac 22577609  T
Q  112 aa 113  Q
    ||    
T  22577608 aa 22577607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 26455712 - 26455805
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    |||||| ||||||| | |||| ||||||||  ||||||||||||||  ||| |||| ||||||||||| |||| |||||||||||| |||||||    
T  26455712 agttaattgcagccagatttttaattcctccgcagttaactgccgagagggtaaaaccgtattttactcgtgtttctcagtcttatcaaatgta 26455805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 28168624 - 28168701
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtg 84  Q
    ||||| ||||||||||||| | |||||| |||| |||||||||||||||||| | ||||||| | |||||||||||||    
T  28168624 ttcggtagttaactgcagctgatttttgcattcttcgacagttaactgccgaggaggcaaaaacatattttacttgtg 28168701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 38872956 - 38873053
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||| ||| ||| |||||   | |||||||||||||  |||| |||||| |||||    
T  38872956 tcggcagttaactgcagccggtttttaaattcctcggtagttaactgacgaggggacaaaaatattttttacttgtgtgcatcagccttatgcaatgt 38873053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 7172613 - 7172693
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtc 88  Q
    ||||||||||| |||||||||||||  |||| |||| ||||||||||  || ||||||||| |||||||||||| ||||||    
T  7172613 tcggcagttaattgcagccggttttaaaatttctcggcagttaactgttgatggggcaaaaacgtattttacttatgtgtc 7172693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 34823049 - 34823152
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaat 114  Q
    |||||||||||||  |||| ||||||||||||||||||||||||  || ||||| ||||| |||| |||||| ||||  |||||  ||||| |||||||     
T  34823049 ttaactgcagccgtatttttaattcctcgacagttaactgccgagaggacaaaaacgtatattacgtgtgtgcctcaaccttatacaatgtgtcaacaac 34823148  T
Q  115 aatt 118  Q
    ||||    
T  34823149 aatt 34823152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 1116214 - 1116264
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  1116214 tcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 1116264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 21406314 - 21406217
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||||| || |||  |     |||||||||| |||| |||||||||||| ||||||    
T  21406314 tcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagaggggatattttggtattttactagtgtttctcagtcttatcaaatgt 21406217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 21800806 - 21800709
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||||| || |||  |     |||||||||| |||| |||||||||||| ||||||    
T  21800806 tcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagaggggatattttggtattttactagtgtttctcagtcttatcaaatgt 21800709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 21835205 - 21835302
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||| || |||| |     |||||||||| |||| |||||| ||||| ||||||    
T  21835205 tcggtagttaactgcagccggtttatgaattcctcgacatttaactgcagagggggtattttggtattttactagtgtttctcagccttatcaaatgt 21835302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 39751120 - 39751017
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||   ||||| ||| ||||||| |||| | ||||||||| ||||||||||| ||||| ||||   ||||| ||||| |    
T  39751120 tcggcagttaactgcagccggtttca-aattcatcggcagttaattgccaagggggcaaaaacgtattttactcgtgtgcctcaacattatgcaatgtgt 39751022  T
Q  108 caaca 112  Q
    |||||    
T  39751021 caaca 39751017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 41276886 - 41276946
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    ||||||||||||||||||||  |||  |||||||| ||||||||||||||| |||||||||    
T  41276886 tcggcagttaactgcagccgaatttctaattcctcaacagttaactgccgagggggcaaaa 41276946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 35966782 - 35966853
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||||||| ||| |||  ||||||||| |||||||||||||| |||||||||  |||||||||| |||||    
T  35966782 ttaactgcagtcggatttcaaattcctcggcagttaactgccgagggggcaaaattgtattttactagtgtg 35966853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 5304170 - 5304280
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||  ||| | | |||| ||||||| | |||||||||||||| |||| |||| ||||||||||| |||| | |||| ||||| |||||| |    
T  5304170 tcggcagttaacaacagtcagatttttaattccttggcagttaactgccgagggggtaaaaacgtattttactcgtgtttttcagccttatcaaatgtgt 5304269  T
Q  108 caacaataatt 118  Q
     ||||| ||||    
T  5304270 gaacaacaatt 5304280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 41743938 - 41743876
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaag 69  Q
    |||||||||||||||||||||| |||  ||||||||| |||||||||  ||| ||||||||||    
T  41743938 ttcggcagttaactgcagccggatttcaaattcctcggcagttaactatcgagggggcaaaag 41743876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 20549258 - 20549319
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaag 69  Q
    |||| |||||||||||||||  |||  ||||||||| |||||||||||||| ||||||||||    
T  20549258 tcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaag 20549319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 38331069 - 38331117
Alignment:
Q  14 gttaactgcagccggtttttgaattcctcgacagttaactgccgaaggg 62  Q
    ||||||||||||||||||| || ||||||| ||||||||||| ||||||    
T  38331069 gttaactgcagccggttttggacttcctcggcagttaactgcagaaggg 38331117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 28646273 - 28646320
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||||||||||||||||||| ||||| ||||||||| || ||||||||    
T  28646273 tcggcagttaactgcagccgatttttaaattcctcggcaattaactgc 28646320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 28650857 - 28650904
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||||||||||||||||||| ||||| ||||||||| || ||||||||    
T  28650857 tcggcagttaactgcagccgatttttaaattcctcggcaattaactgc 28650904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 38135635 - 38135682
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||| ||||||||||||||||||| | ||||||||| |||||||||||    
T  38135635 tcggtagttaactgcagccggtttataaattcctcggcagttaactgc 38135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 38134404 - 38134362
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||||||||||| |||||| ||||||||||| |||||||||||    
T  38134404 agttaactgcagtcggtttatgaattcctcggcagttaactgc 38134362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 4867815 - 4867847
Alignment:
Q  30 ttttgaattcctcgacagttaactgccgaaggg 62  Q
    |||||||||||||| ||||||||||||||||||    
T  4867815 ttttgaattcctcggcagttaactgccgaaggg 4867847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 5300756 - 5300684
Alignment:
Q  46 agttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    ||||||||| ||| ||| ||||| ||||||||||| |||| |||||  ||||| |||||| ||||||| ||||    
T  5300756 agttaactgtcgaggggacaaaaacgtattttactcgtgtttctcaaccttatcaaatgtgtcaacaacaatt 5300684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 13479770 - 13479660
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||| |||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  13479770 gcagttaactgcagctggtttttgaattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaa 13479671  T
Q  111 caataattttc 121  Q
    ||| |||||||    
T  13479670 caacaattttc 13479660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 23986009 - 23986099
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatga 100  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||    
T  23986009 ggcagttaactgcaaccggtttttgaatttctcggcagttaactgccaagggggcaaaaacgtattttacttgtgtgtctcagccttatga 23986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 35021289 - 35021399
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||||||||| ||  || ||||||||||| |||||||||| |||||||||| |||| |||||| | ||| |||||| |    
T  35021289 tcggcagttaactgcagccggtttttgaattcttccgcatttaactgccgagggggcaaaagtgtattttactcgtgtttctcagccatataaaatgtgt 35021388  T
Q  108 caacaataatt 118  Q
    |||||||||||    
T  35021389 caacaataatt 35021399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 13404659 - 13404768
Alignment:
Q  9 cggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatc 108  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||| | |||||| ||||| |     
T  13404659 cggcagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtattttacttgtgtgcctcggccttatgcaatgtgtt 13404758  T
Q  109 aacaataatt 118  Q
    ||||| ||||    
T  13404759 aacaacaatt 13404768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 12783991 - 12784074
Alignment:
Q  16 taactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatg 99  Q
    ||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  12783991 taactgcagccggttattgaattcatcggcagttaactgccgatggggcaaaagcgtattttacttgtgtgcctcagccttatg 12784074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 23958937 - 23958824
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||| |||||||||||||||||| ||||| |||| |||||||||||||| ||| ||||| ||||||||| ||| ||||||||| ||||| | |||| |    
T  23958937 tcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtattttagttgggtgtctcagccttatcatatgtgt 23958838  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  23958837 caacaacaattttc 23958824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 18001261 - 18001147
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||    | ||||||||||||||  ||||  ||||||||||||     
T  18001261 ttcggcagttaactgcagccggttttt-aattcctcaacagttaactgccgatagggcatttacatattttacttgtgtacctcaaccttatgaaatgtg 18001163  T
Q  107 tcaacaataattttca 122  Q
    ||||||| ||||||||    
T  18001162 tcaacaacaattttca 18001147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 7537247 - 7537161
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcag 92  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||  ||||| ||||| |||||    
T  7537247 tttcggtagttaactgcagccggttttttaattcctcgacaattaactgccgagggggcaaaaacgtaaattactcgtgtgcctcag 7537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 13401530 - 13401429
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||||| ||||| ||| ||||  ||||  ||||| |||||| ||||    
T  13401530 gcagttaactgcagccgattttttaattcctcggcagttaactgccgagggggcaaaagcatatttaactcgtgttactcaaccttataaaatgtgtcaa 13401431  T
Q  111 ca 112  Q
    ||    
T  13401430 ca 13401429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 29286276 - 29286166
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| ||||||| | | ||||||| ||||||||| |||| ||||||||| ||||  ||||||||||| ||||  |||||| ||||| |    
T  29286276 tcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatgcaatgtgt 29286177  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  29286176 caacaacaatt 29286166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 16192809 - 16192705
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaat 114  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||| |||||||| || |||| ||| || |||   |||||||||||| |     
T  16192809 ttaactgcagccgatttttaaattactcgacagttaactgccgagggggcaaaaacgtattttcctcgtgtttcttagcctt---aaatgtatcaacgac 16192713  T
Q  115 aattttca 122  Q
    ||||||||    
T  16192712 aattttca 16192705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 2051075 - 2050974
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| |||||||   ||||| ||| ||||||||||||||||| |||||| ||||||||||| |||||  |||| |||||| ||||| |    
T  2051075 tcggcagttaactgcaaccggtttca-aattcatcggcagttaactgccgaaggagcaaaaacgtattttactcgtgtgcatcagccttatgcaatgtgt 2050977  T
Q  108 caa 110  Q
    |||    
T  2050976 caa 2050974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 25141105 - 25141215
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||||||| || |||||   ||  ||| | ||||| ||||| |||||| ||||| |    
T  25141105 tcggcagttaactgtagctggtatttgaattcctcgacagttaactgccgaatggacaaaaatataaattattcgtgtgcctcagccttatgcaatgtgt 25141204  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  25141205 caacaacaatt 25141215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 7361238 - 7361134
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||| || |||||  ||||||| |||||| ||| ||||| ||||  ||||| ||||| | ||| |||||| ||||| |    
T  7361238 tcggcagttaactgcagccggtttttaaaatcctcagcagttaattgccgacgggacaaaaacgtaaattactcgtgtgccacagccttatgcaatgtgt 7361139  T
Q  108 caaca 112  Q
    |||||    
T  7361138 caaca 7361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 31768800 - 31768740
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||| |||||||||||||| |||| ||||||||| |||||||||||||| |||||||||    
T  31768800 tcggcaattaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaaa 31768740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 18606091 - 18605982
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||| |   ||||||| | ||||||||| |||| ||||||||| ||||||||||| ||||| ||||| || ||  ||||| |    
T  18606091 tcggcagttaactgcagccggtgtca-aattcctaggcagttaactaccgagggggcaaaaacgtattttactcgtgtgcctcagcctcatacaatgtgt 18605993  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  18605992 caacaacaatt 18605982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 18610232 - 18610309
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||| ||||||||||||   ||||||||| || |||||| |||||||||||||| ||||||||||| |||||    
T  18610232 tcggcagttaaatgcagccggtttca-aattcctcggcatttaactaccgaaggggcaaaaacgtattttactcgtgtg 18610309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 32026096 - 32026038
Alignment:
Q  64 caaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttca 122  Q
    ||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||    
T  32026096 caaaaacgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattttca 32026038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 32643551 - 32643660
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    ||||||||||||||||| |||| ||||||| | |||||||||||||| | ||||    ||||||||||||||| |  |||  |||||||||||| | |||    
T  32643551 cagttaactgcagccggatttttaattccttggcagttaactgccgaggaggcatttacgtattttacttgtgggcttcaaccttatgaaatgtgtgaac 32643650  T
Q  112 aataattttc 121  Q
    || |||||||    
T  32643651 aacaattttc 32643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 29076352 - 29076440
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatg 99  Q
    |||||||||||||||||| |||  ||  | |||||||||||||||||||||||||||| |||   ||||||||||| | ||| ||||||    
T  29076352 gcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaattacttgtgtgccacagccttatg 29076440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 29109885 - 29109973
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatg 99  Q
    |||||||||||||||||| |||  ||  | |||||||||||||||||||||||||||| |||   ||||||||||| | ||| ||||||    
T  29109885 gcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaattacttgtgtgccacagccttatg 29109973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 29111325 - 29111413
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatg 99  Q
    |||||||||||||||||| |||  ||  | |||||||||||||||||||||||||||| |||   ||||||||||| | ||| ||||||    
T  29111325 gcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaattacttgtgtgccacagccttatg 29111413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 29065782 - 29065727
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||||||||||||| |||  ||||||||| |||||||||||||| |||||||||    
T  29065782 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaa 29065727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 29074795 - 29074740
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||||||||||||| |||  ||||||||| |||||||||||||| |||||||||    
T  29074795 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaa 29074740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 29079559 - 29079504
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||||||||||||| |||  ||||||||| |||||||||||||| |||||||||    
T  29079559 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaa 29079504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 29107368 - 29107313
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||||||||||||| |||  ||||||||| |||||||||||||| |||||||||    
T  29107368 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaa 29107313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 8193235 - 8193292
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggca 65  Q
    ||||||||||||||||||||  |||| ||||||||| ||||||||||| | |||||||    
T  8193235 tcggcagttaactgcagccgtgtttttaattcctcggcagttaactgctgcaggggca 8193292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 29061343 - 29061246
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||| |||||||||||||||  |||  ||||||||| |||||||||||||| |||||||||  |||  ||||| ||||| | ||| |||||| |||||    
T  29061343 tcggaagttaactgcagccgaatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatgtaatgt 29061246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 35241950 - 35241913
Alignment:
Q  18 actgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||||||||||||| |||||||||||||||||||||||    
T  35241950 actgcagccggtttatgaattcctcgacagttaactgc 35241913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 2052615 - 2052693
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcag 92  Q
    ||||||||||||||| |||   |||||||||||||||||||||||| ||| ||||| ||||  ||||| ||||| |||||    
T  2052615 agttaactgcagccgatttca-aattcctcgacagttaactgccgaggggacaaaaacgtaaattactcgtgtgcctcag 2052693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 17596988 - 17596941
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||||||||||||||||||||||||    |||||||||||||||||||    
T  17596988 tcggcagttaactgcagccggttttatttttcctcgacagttaactgc 17596941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 18347088 - 18347033
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaagggg 63  Q
    ||||||||||||||||||||| |||   |||||||| |||||||||||||| ||||    
T  18347088 tcggcagttaactgcagccggatttcagattcctcggcagttaactgccgaggggg 18347033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 28362757 - 28362804
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||    
T  28362757 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 28362804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 6320531 - 6320625
Alignment:
Q  24 gccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    ||||| |||| |||||||||||||||||||||||| | | ||||| | ||||||| | |||| |||||  ||||| |||| | ||||||| ||||    
T  6320531 gccggatttttaattcctcgacagttaactgccgaggagacaaaaacatattttattcgtgtttctcaaccttatcaaatatgtcaacaacaatt 6320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 29667828 - 29667874
Alignment:
Q  64 caaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||||| |||| |||||| |||||||||||| ||||    
T  29667828 caaaagcgtattttactcgtgtttctcagccttatgaaatgtgtcaa 29667874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 13616284 - 13616247
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagt 48  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  13616284 gcagttaactgcagtcggttttttaattcctcgacagt 13616247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 34801547 - 34801470
Alignment:
Q  45 cagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttca 122  Q
    |||||||||||||| | | ||||| ||||||||||||||||  |||||  ||||| ||||| |||| | |||||||||    
T  34801547 cagttaactgccgaggagacaaaaacgtattttacttgtgttcctcagcattatgtaatgtgtcaaaagtaattttca 34801470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 26702742 - 26702798
Alignment:
Q  65 aaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttc 121  Q
    |||||||||||||||| ||||| | ||| |||||| ||||| ||||||| |||||||    
T  26702742 aaaagcgtattttactcgtgtgacacagccttatgcaatgtgtcaacaacaattttc 26702798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 45475487 - 45475373
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |    
T  45475487 tcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttacttgtgtgtctcagccttatgaaatgtgt 45475388  T
Q  108 caacaataattttca 122  Q
    |||||  ||||||||    
T  45475387 caacatcaattttca 45475373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 35493367 - 35493477
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||  |||||| ||||| |    
T  35493367 tcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatgtgt 35493466  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  35493467 caacaacaatt 35493477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 2917730 - 2917617
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||| ||||||||||| |||| |||| |||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||||||||| |    
T  2917730 tcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgtgcctcagccttatgaaatgtgt 2917631  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  2917630 caacaacaattttc 2917617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 28342570 - 28342460
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||  |||||| ||||||| || |||||| ||||| |    
T  28342570 tcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaattacttatgtgtcttagccttatgcaatgtgt 28342471  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  28342470 caacaacaatt 28342460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 19186791 - 19186683
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||||| |||||||||| |||| ||||| |||||||| |||| |||| ||||||||||||||||||||||| ||||||| |||| ||||    
T  19186791 gcagttaactgcagccgctttttgaattgctcggcagtttactgccgatggggtaaaaacgtattttacttgtgtgtctcagccttatgatatgtgtcaa 19186692  T
Q  111 caataattt 119  Q
    ||| |||||    
T  19186691 caacaattt 19186683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 41500260 - 41500364
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||| |||||||||| | || ||||||||||||| ||||||||||||||||||||| |||| |||||| | |||||||||| |    
T  41500260 tcggcagttaactgcagccggattttgaattctttgatagttaactgccgagggggcaaaagcgtattttactcgtgtttctcagccatatgaaatgtgt 41500359  T
Q  108 caaca 112  Q
    |||||    
T  41500360 caaca 41500364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 19187249 - 19187361
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||| |||||||| | || ||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||| |    
T  19187249 tcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgatatgtct 19187348  T
Q  108 caacaataatttt 120  Q
     ||||| ||||||    
T  19187349 gaacaacaatttt 19187361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 41181484 - 41181380
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| || |||||||| |||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||| ||||| |||||| ||||| |    
T  41181484 tcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatgcaatgtgt 41181385  T
Q  108 caaca 112  Q
    |||||    
T  41181384 caaca 41181380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 12905596 - 12905492
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| ||||| |||| |||| |||||||||||||| |||  ||||||||||||||||  ||| |||||| |||||||||||| |    
T  12905596 tcggcagttaactgcagccgatttttcaatttctcggcagttaactgccgaggggaaaaaagcgtattttactcttgtttctcagccttatgaaatgtgt 12905497  T
Q  108 caaca 112  Q
    |||||    
T  12905496 caaca 12905492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 24512216 - 24512112
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||| ||||||||||| ||||||| |||||||| ||||||||||| ||| |||| |||| |||||||||||||||| |||||| | ||||||||||    
T  24512216 tttcggcaattaactgcagctggttttttaattcctcaacagttaactgtcgagggggtaaaaacgtattttacttgtgtttctcagccatatgaaatgt 24512117  T
Q  106 atcaa 110  Q
     ||||    
T  24512116 gtcaa 24512112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 43493281 - 43493381
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||  |||||||| ||||| |||||||   |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||    
T  43493281 tttcggcagttatttgcagccgattttttaattccttagcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgtaatgt 43493380  T
Q  106 a 106  Q
    |    
T  43493381 a 43493381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 23409527 - 23409640
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||| |||||||||||||||| || |||||||||||  ||||||| |||||||||||| |||||  |||| |||||| || || |    
T  23409527 tcggcagttaactgcagccagtttttgaattcctcggcaattaactgccgagagggcaaacgcgtattttactagtgtgcatcagccttatgtaacgtgt 23409626  T
Q  108 caacaataattttc 121  Q
    | |||| |||||||    
T  23409627 ccacaacaattttc 23409640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 34921788 - 34921886
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||  ||||||||| ||||||||||| |||| |||| | |||||||||||| ||||    
T  34921788 gcagttaactgcagccggtttttgaatttctcggcagttaactaccg-gggggcaaaaacgtattttactcgtgtttctctgccttatgaaatgtgtcaa 34921886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 35490724 - 35490625
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||||||||||||||||| ||| |||||||| | ||| | |||||||  |||||||||| ||||||||||| |||||| ||||| ||||    
T  35490724 gcagttaactgcagccggtttttgaattcttcggcagttaaccgtcgaggaggcaaaaatgtattttactcgtgtgtctcagccttatgcaatgtgtcaa 35490625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 25184856 - 25184965
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||| || ||||||||| ||||||||||| ||||| ||||  |||||| ||| | |    
T  25184856 tcggcagttaactgcagccggtttca-aattcctcgacagttaactgctgagggggcaaaaacgtattttactcgtgtgcctcaaccttatgcaatctgt 25184954  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  25184955 caacaacaatt 25184965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 34918495 - 34918393
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    ||||||| | |||||||||||| |||| ||| | ||||||||| ||| ||||||||| |||||| |||||||||| ||||| ||||||| ||||||||||    
T  34918495 cagttaattacagccggtttttcaattactcaatagttaactgacgagggggcaaaaacgtattgtacttgtgtgcctcagccttatgagatgtatcaac 34918396  T
Q  112 aat 114  Q
    |||    
T  34918395 aat 34918393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 2648845 - 2648776
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtatttt 77  Q
    |||| ||||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||    
T  2648845 tcggtagttaactgcagccggtttttgaattccttggcagttaactgccgagagggcaaaagcgtatttt 2648776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 19470033 - 19469918
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||||| |||||| ||||||||||| | |||||||||  |||||   |||| |||||||||||||||||| |||  ||||| ||||||    
T  19470033 tttcggcagttaactgcaaccggttattgaattcctcaatagttaactg-tgaaggaaaaaaaacgtattttacttgtgtgtgtcaaccttataaaatgt 19469935  T
Q  106 atcaacaataattttca 122  Q
    ||||| || ||||||||    
T  19469934 atcaagaacaattttca 19469918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 1096642 - 1096564
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||| ||||| ||||||||| ||||||||||| |||||    
T  1096642 tcggcagttaactgcagccggatttcaaattcctcggcagttaacagccgagggggcaaaatcgtattttactagtgtg 1096564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 24607594 - 24607704
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||| || || ||| ||||||||||| || |||| |||| ||||  |||| |||||| ||||| |||||| ||||| |    
T  24607594 tcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgagggggaaaaaacgtaaattacctgtgtgcctcagccttatgcaatgtgt 24607693  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  24607694 caacaacaatt 24607704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 12908455 - 12908568
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||||| | | ||||  ||||||||| |||||| ||||| | ||| | |||| |    
T  12908455 tcggcagttaactgcagccaatttttgaatttctcgacagttaactgccgaatgaggaaaattgtattttacatgtgtgcctcagccctatcatatgttt 12908554  T
Q  108 caacaataattttc 121  Q
    |||||  |||||||    
T  12908555 caacagcaattttc 12908568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 43950268 - 43950372
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| ||||| ||||||| ||||||| |  |||||||||||||| |||||||||  |||||||||| |||| |||||| ||||| |||||| |    
T  43950268 tcggcagttaattgcagtcggtttt-gaattccacagcagttaactgccgagggggcaaaaatgtattttactcgtgtttctcagccttatcaaatgtgt 43950366  T
Q  108 caacaa 113  Q
    ||||||    
T  43950367 caacaa 43950372  T

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Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 8268780 - 8268887
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaaca 112  Q
    |||||| |||||||| |||||| ||||||  ||||||||||||||| ||| ||||| |||||||||||  |||   |||||||||| |||||| ||||||    
T  8268780 agttaattgcagccgatttttgcattccttaacagttaactgccgaggggacaaaatcgtattttactaatgtacgtcagtcttataaaatgtgtcaaca 8268879  T
Q  113 ataatttt 120  Q
    | ||||||    
T  8268880 acaatttt 8268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 25964858 - 25964754
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcg-------acagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatga 100  Q
    ||||||||||||||||||||| |||| |||||||||       || |||||||||||| ||||||||| ||||||||||| |||| |||||| ||||| |    
T  25964858 tcggcagttaactgcagccggatttttaattcctcggtccttgacggttaactgccgagggggcaaaatcgtattttactcgtgtttctcagccttatca 25964759  T
Q  101 aatgt 105  Q
    |||||    
T  25964758 aatgt 25964754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 27276400 - 27276478
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||  |||||||||||||| |||| |||| ||||||||||| |||||    
T  27276400 tcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtattttactagtgtg 27276478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 41497519 - 41497417
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||| || ||| | ||||||| ||||  ||||| ||||| ||||| |||||| ||||| |    
T  41497519 tcggcaattaactgcagccggtttttgaattcttcggcagttaagtgtcgaggtggcaaaaacgtaaattactcgtgtgcctcagccttatgcaatgtgt 41497420  T
Q  108 caa 110  Q
    |||    
T  41497419 caa 41497417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 43943732 - 43943658
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||| || |||||||||| |||||||||| || |||| |||| ||||||||| |||||||    
T  43943732 cagttaactgcagccggttattaaattcctcgagagttaactgctgagggggaaaaatcgtattttatttgtgtg 43943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 45137459 - 45137557
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    ||||||||||||||||||||  |||| ||||||||| || ||||||||| | | ||||||| ||||||||||| |||| | |||| ||||| |||||||    
T  45137459 tcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtattttactcgtgtttatcagccttatcaaatgta 45137557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 45479820 - 45479933
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||| |||||| ||| || ||||| |||| |||| ||||||||||||||  | |||||| |||||||||||  ||| ||| || |||||||||||| |    
T  45479820 tcggcaattaactacagtcgattttttaatttctcggcagttaactgccgagagagcaaaatcgtattttactcatgtttctgagccttatgaaatgtgt 45479919  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  45479920 caacaacaattttc 45479933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 3795384 - 3795334
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  3795384 tcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 3795334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 20951072 - 20951126
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggg 62  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||    
T  20951072 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggg 20951126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 41008954 - 41009055
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| |||||||||||    ||||||||| |||||||||||||| | ||||||| ||||  ||||| ||||||||| ||||||| |||||| |    
T  41008954 tcggcagttaaatgcagccggttaca-aattcctcggcagttaactgccgaggaggcaaaaacgtaaattactcgtgtgtctcggtcttatcaaatgtgt 41009052  T
Q  108 caa 110  Q
    |||    
T  41009053 caa 41009055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 36255739 - 36255852
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| |||  |||| ||||||||||||||||||||||| ||||| |    ||| ||||||| |||| |||||| ||| | | |||| |    
T  36255739 tcggcagttaactgcaaccgtgtttttaattcctcgacagttaactgccgcaggggaatttacgtcttttactggtgtttctcagccttctcatatgtgt 36255838  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  36255839 caacaacaattttc 36255852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 9660081 - 9660141
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||||| |||||||||||||| ||| |||||||| ||||||||||||||  ||||||||    
T  9660081 tcggcagtcaactgcagccggttattgtattcctcggcagttaactgccgagagggcaaaa 9660141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 24601686 - 24601626
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||| ||||| ||| ||||    
T  24601686 tcggtagttaactgcagccagtttttaaattcctcgacagttaactaccgaatgggaaaaa 24601626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 24612428 - 24612488
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||| ||||| ||| ||||    
T  24612428 tcggtagttaactgcagccagtttttaaattcctcgacagttaactaccgaatgggaaaaa 24612488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 41053698 - 41053798
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    |||||||||||||||||||| | |||| || |||||||||||| ||| | ||||||| ||||  ||||| | ||| ||||| |||||| ||||| |||||    
T  41053698 cagttaactgcagccggtttcttaatttctggacagttaactgtcgaggaggcaaaaacgtaaattactcgcgtgcctcagccttatgtaatgtgtcaac 41053797  T
Q  112 a 112  Q
    |    
T  41053798 a 41053798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 38945809 - 38945754
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaagggg 63  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||||| ||||    
T  38945809 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggggg 38945754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 1149515 - 1149441
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||  ||| |||  ||||||||| |||||||||||||| || |||||| ||||||||||| |||||    
T  1149515 cagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttactagtgtg 1149441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 3803569 - 3803619
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  3803569 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 3803619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 14181849 - 14181895
Alignment:
Q  9 cggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||    
T  14181849 cggcagttaactgcagacggtttttgaattccttggcagttaactgc 14181895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 34639343 - 34639437
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||||| |||| |||| |||| |||||| ||||||| |||||||||  |||  ||||| ||||| | ||| ||||| ||||||    
T  34639343 gcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaaagtaaattactagtgtggcacagccttatcaaatgt 34639437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 2648164 - 2648059
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||| ||  | ||| |||||||||||||||  |||||| |||   || |||| ||||||||||| |||| |||||  |||||||||||| |    
T  2648164 tcggcagttaactacatacagttattgaattcctcgacaagtaactgtcgagacggaaaaaacgtattttactcgtgtttctcaaccttatgaaatgtct 2648065  T
Q  108 caacaa 113  Q
    ||||||    
T  2648064 caacaa 2648059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 36255063 - 36254950
Alignment:
Q  9 cggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatc 108  Q
    ||||||||||||||||||| ||||| ||||||||| || |||||| ||| |||||||    ||| ||||||| |||| |||||| ||| | | |||| ||    
T  36255063 cggcagttaactgcagccgatttttaaattcctcggcaattaacttccgcaggggcatttacgtcttttactggtgtttctcagccttctcatatgtgtc 36254964  T
Q  109 aacaataattttca 122  Q
    ||||  ||||||||    
T  36254963 aacatcaattttca 36254950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 1101078 - 1101150
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttact 80  Q
    ||||||||||||| ||||||| |||  ||||| ||| |||||||||||||| || |||||| | |||||||||    
T  1101078 tcggcagttaactacagccggatttcaaattcatcggcagttaactgccgagggagcaaaatcatattttact 1101150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 16580562 - 16580482
Alignment:
Q  38 tcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    |||| |||| ||||||| ||| | |||||||  |||||||||| ||||||||||| |||||| ||||| ||||||| ||||    
T  16580562 tccttgacaattaactgtcgaggaggcaaaaatgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaatt 16580482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 16583595 - 16583638
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaa 51  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  16583595 tcggcagttaactgcagccgaatttttaattcctcgacagttaa 16583638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 23786164 - 23786081
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttat 98  Q
    |||||||  ||||| |||| ||||||||| |||||||||||||| ||| ||||| | |||||||||  ||| |||||| |||||    
T  23786164 ttaactgtcgccggatttttaattcctcggcagttaactgccgaggggacaaaatcatattttactaatgtttctcagccttat 23786081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 7189977 - 7190054
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||  | ||| ||||||||||||| |||||||||| |||| |||||| |||||    
T  7189977 tcggcagttaactgcagccggatttctaaaacttcggcagttaactgccg-aggggcaaaaacgtaatttactcgtgtg 7190054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 17911213 - 17911167
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaagg 61  Q
    |||||||||||||||||| || ||||||| |||||||||| ||||||    
T  17911213 ttaactgcagccggttttggacttcctcggcagttaactgtcgaagg 17911167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 24749733 - 24749655
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||| ||| |||  ||  |||||||||  ||||||||||||| |||| |||| ||||||||||| |||||    
T  24749733 tcggcagttaactacagtcggaattcaaattcctcggtagttaactgccgagggggtaaaatcgtattttactagtgtg 24749655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 42177245 - 42177287
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||    
T  42177245 agttaacagcagccggtttatgaattcctcggcagttaactgc 42177287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 43257797 - 43257744
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaagg 61  Q
    ||||||||||||||| ||||||||||  |  | |||||||||||||||||||||    
T  43257797 tcggcagttaactgctgccggttttttcaaacttcgacagttaactgccgaagg 43257744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 30271118 - 30271066
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaagggg 63  Q
    |||||||||||||||||| |||| |||||||| ||  |||||| |||||||||    
T  30271118 gcagttaactgcagccggatttttaattcctcaacctttaactaccgaagggg 30271066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 40675749 - 40675705
Alignment:
Q  59 aggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaat 103  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||||    
T  40675749 agggacaaaaacgtattttacttgtgtgtctcaaccttatgaaat 40675705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 41004577 - 41004526
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    |||||||||||||||||||||||||    ||||||||| ||||||||||||||    
T  41004577 tttcggcagttaactgcagccggttaca-aattcctcggcagttaactgccga 41004526  T

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Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 21472510 - 21472624
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||| ||||||||||| |||| |||||| |||||||||||| |    
T  21472510 tcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgt 21472609  T
Q  108 caacaataattttca 122  Q
    |||||| ||||||||    
T  21472610 caacaacaattttca 21472624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 29700328 - 29700441
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||| ||| | | ||||||||||||||||||||||| ||||| |||||||||||| |    
T  29700328 tcggcagttaactgcagccggttattgaattcctcagcagttaactgtcgaggagacaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgt 29700427  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  29700428 caacaacaattttc 29700441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 49572926 - 49573031
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||| |||||| ||||| |    
T  49572926 tcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgt 49573025  T
Q  108 caacaa 113  Q
    ||||||    
T  49573026 caacaa 49573031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 4768725 - 4768612
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||   |||||||||||||||  |||| |||||||||||| |    
T  4768725 tcggcagttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtgt 4768626  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  4768625 caacaacaattttc 4768612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 51426584 - 51426471
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||| || || ||||||||| || |    
T  51426584 tcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattttacttgtgtgcctaagccttatgaaacgtgt 51426485  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  51426484 caacaacaattttc 51426471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 34154431 - 34154541
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||  |||||||||  |||| |||||| |||||||||||| ||||    
T  34154431 gcagttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaatgtattttacccgtgtttctcagccttatgaaatgtgtcaa 34154530  T
Q  111 caataattttc 121  Q
    ||| |||||||    
T  34154531 caacaattttc 34154541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 955839 - 955726
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||| ||| ||||||| ||||||||||||||||| ||||   ||||||||||| |    
T  955839 tcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtattttacttgtgtgcctcaactttatgaaatgtgt 955740  T
Q  108 caacaataattttc 121  Q
    |||||  |||||||    
T  955739 caacatcaattttc 955726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 37959746 - 37959858
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||||||| |||| |||| ||||||||||| ||||| ||||| |||||| ||||| |    
T  37959746 tcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttactcgtgtgcctcagccttatgtaatgtgt 37959845  T
Q  108 caacaataatttt 120  Q
    |||||| ||||||    
T  37959846 caacaacaatttt 37959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 18578696 - 18578614
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctc 90  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||| | | |||||||  ||||||||||||||||||||    
T  18578696 tcggcagataactgcagccgttttttgaattcctcgacagttaactgccaaggaggcaaaaatgtattttacttgtgtgtctc 18578614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 44561356 - 44561469
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||| ||||||||||||||||||||| | || |||| ||||||||  ||||  |||||||| ||||||||||| |||| |||||| |||||||||||| |    
T  44561356 tcggtagttaactgcagccggttttttatttactcggcagttaacaaccgagagggcaaaatcgtattttactcgtgtttctcagccttatgaaatgtgt 44561455  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  44561456 caacaacaattttc 44561469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 49422181 - 49422077
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    |||||||||||||||||||||| ||||||||| |||||     |||||||||||||| ||||||||| ||||||| ||||| |||||||||||| | |||    
T  49422181 cagttaactgcagccggttttttaattcctcggcagtt-----ccgaaggggcaaaaacgtattttatttgtgtgactcagccttatgaaatgtgtaaac 49422087  T
Q  112 aataattttc 121  Q
    || |||||||    
T  49422086 aacaattttc 49422077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 11494590 - 11494508
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctca 91  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| ||||| ||||||||||| |||| |||||    
T  11494590 tcggcagttaactgcagccggtttt-gaattcctcgacagttaattgccgaggggacaaaaacgtattttactcgtgtttctca 11494508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 37394295 - 37394217
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  37394295 tcggcagttaactgcatccggatttcaaattcctcgacagttaactgccgaagaggcaaaatcgtattttactagtgtg 37394217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 958620 - 958732
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||| |||  || ||||| |||||||||||| |||| ||||| ||||| |||||| |    
T  958620 tcggcagttaactgcaaccggtttttgaattcatcg-cagttaactgtcgagaggacaaaaacgtattttacttatgtgcctcagccttataaaatgtgt 958718  T
Q  108 caacaataattttc 121  Q
    |||||  |||||||    
T  958719 caacatcaattttc 958732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 4979946 - 4980062
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| || | |||| ||||  ||||| ||||| ||||  |||||| ||||| ||||    
T  4979946 gcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgagggaggaaaaacgtaaattactcgtgtgcctcaaccttatgcaatgtgtcaa 4980045  T
Q  111 caataattttcagaata 127  Q
    ||| |||| ||| ||||    
T  4980046 caacaattctcaaaata 4980062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 6283467 - 6283578
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||||||||||  || |||||||||  |  |    ||||||||||||||||| |||| |||||||| |||||||||| |    
T  6283467 tcggcagttaactgcagccggtttttgaattctgcggcagttaactttcaga----caaaagcgtattttactcgtgtttctcagtcatatgaaatgtgt 6283562  T
Q  108 caacaataattttcag 123  Q
    |||||| |||| ||||    
T  6283563 caacaacaattctcag 6283578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 9890041 - 9889963
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||||| |||| |||| ||||||||||| |||||    
T  9890041 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactggtgtg 9889963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 44051118 - 44051228
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||| ||||||||||||||||||| | | ||||||| |||||||| ||||| ||||||||| ||||  ||||| ||||| ||||| |||||| ||||| |    
T  44051118 tcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaattactggtgtgcctcagccttatgcaatgtgt 44051217  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  44051218 caacaacaatt 44051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 8109438 - 8109341
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||| |||||| | || ||||||||||||||||||| || | |||| |||| ||||||||||| |||| |||||| ||||| ||||||    
T  8109438 tcggcagttaactgtagccggatatttaattcctcgacagttaactaccaagggggtaaaatcgtattttactcgtgtttctcagccttatcaaatgt 8109341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 24417446 - 24417554
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    ||||||||||||||||||||||||||| |||||||||||||| || || | |||    ||||||||||| |||||||||||  |||||| |||| |||||    
T  24417446 cagttaactgcagccggtttttgaatttctcgacagttaactacc-aatgtgcagtttcgtattttactcgtgtgtctcagcgttatgatatgtgtcaac 24417544  T
Q  112 aataattttc 121  Q
    || |||||||    
T  24417545 aacaattttc 24417554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 51644499 - 51644614
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactg-ccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||    || ||||||||  ||||||||||| |||| ||||| || || ||||||     
T  51644499 tcggcagttaactgcagccgatttttgaattcctcgacaattaattgataaaaagggcaaaatggtattttacttatgtgcctcagcctaataaaatgtg 51644598  T
Q  107 tcaacaataattttca 122  Q
    ||||||| ||||||||    
T  51644599 tcaacaacaattttca 51644614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 1044545 - 1044623
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||| | |||  ||||| ||||||||||||||||||||| |||||| | ||||||||| |||||    
T  1044545 tcggcagttaactgcagccagatttcaaattcatcgacagttaactgccgaaggagcaaaatcatattttactagtgtg 1044623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 33383852 - 33383750
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||| |||||||| || ||||||||| |||||| ||||   |||||||  |||||||||||||||| || |  |||||||||||| |    
T  33383852 tcggcagttaactgcagtcggtttttaaaatcctcgacaattaactaccgagaaggcaaaaatgtattttacttgtgtgcctaaaccttatgaaatgtgt 33383753  T
Q  108 caa 110  Q
    |||    
T  33383752 caa 33383750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 50274807 - 50274729
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||||| ||||||||| ||||  ||||| |||||    
T  50274807 tcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaacgtaaattactcgtgtg 50274729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 17139671 - 17139560
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||||||| |||| |||   |||||||||| ||||| |||||  ||||||| |||| |    
T  17139671 tcggcagttaactgcagccggttttt-tatttctcgacagttaactgccg-agggacaatttcgtattttacatgtgtttctcaaccttatgatatgtgt 17139574  T
Q  108 caacaataattttc 121  Q
     ||||| |||||||    
T  17139573 gaacaacaattttc 17139560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 21470944 - 21470867
Alignment:
Q  14 gttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctca 91  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||   | ||||| ||||||||||||||||| ||||    
T  21470944 gttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtattttacttgtgtgcctca 21470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 56304923 - 56304827
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||| |||||||||||| | |||| ||||||||||||||||||||||| | ||||||||  |||||||||| |||| |||||  ||||| ||||||    
T  56304923 tcggcaattaactgcagccagatttttaattcctcgacagttaactgccg-atgggcaaaaatgtattttactcgtgtttctcaaccttatcaaatgt 56304827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 6280897 - 6280794
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaat 114  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||  |||||||| ||||  ||||| ||||| | ||  |||||| ||||| |||||||     
T  6280897 ttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaacgtaaattactcgtgtgccccaaccttatgcaatgtgtcaacaac 6280798  T
Q  115 aatt 118  Q
    ||||    
T  6280797 aatt 6280794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 3403894 - 3403840
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggg 62  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||    
T  3403894 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggg 3403840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 44558694 - 44558634
Alignment:
Q  61 gggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttc 121  Q
    ||||||||| |||||||||||||||| ||||| |||||| ||||| ||||||| |||||||    
T  44558694 gggcaaaagtgtattttacttgtgtgcctcagccttatgtaatgtgtcaacaacaattttc 44558634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 18581332 - 18581375
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaa 51  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  18581332 tcggcagttaactgcagctggtttttgaattcctcgatagttaa 18581375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 37395217 - 37395296
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggc-aaaagcgtattttacttgtgtg 86  Q
    |||||| |||||||||||||| |||  ||||||||||||||||| ||| || ||||| |||| ||||||||||| |||||    
T  37395217 tcggcaattaactgcagccggatttcaaattcctcgacagttaagtgctgagggggcaaaaatcgtattttactagtgtg 37395296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 56138299 - 56138216
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattc-----ctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||| ||||      |||| |||||||||| ||||||||||||| ||||||||||| |||||    
T  56138299 tcggcagttaactgcagccggatttttaatttaatttctcggcagttaactgtcgaaggggcaaaatcgtattttactagtgtg 56138216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 39588139 - 39588061
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||| ||  |||  ||||||||| |||||||||||||| ||||||||| |||  |||||| |||||    
T  39588139 tcggcagttaactgcagtcgaatttctaattcctcggcagttaactgccgagggggcaaaaacgtcatttactcgtgtg 39588061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 50278824 - 50278902
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||| ||| ||| ||||| ||||  ||||| |||||    
T  50278824 tcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaaacgtaaattactcgtgtg 50278902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 51683276 - 51683202
Alignment:
Q  39 cctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaa 113  Q
    ||||| ||||||||||| || ||||||||| ||||||||||| |||| |||||| |||||  ||||||| |||||    
T  51683276 cctcggcagttaactgctgagggggcaaaaacgtattttactcgtgtttctcagccttatcgaatgtatgaacaa 51683202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 67643 - 67575
Alignment:
Q  37 ttcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||||| ||| ||||||    ||||||||||||| ||||||||| ||||||| ||||    
T  67643 ttcctcgacagttaactgtcgagggggcattttcgtattttacttgcgtgtctcagccttatgatatgt 67575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 1041982 - 1041922
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    ||||||||||||||||| ||| |||  ||||||||| ||||||||||||||  ||||||||    
T  1041982 tcggcagttaactgcagtcggatttctaattcctcggcagttaactgccgatcgggcaaaa 1041922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 15995769 - 15995685
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcag 92  Q
    ||||||||||||||||||||| |||  ||||||||| || ||||||||||| |||| |   | ||| ||||||||||| ||||||    
T  15995769 tcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagggggtatttgggtaatttacttgtgtttctcag 15995685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 17343435 - 17343475
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  17343435 ttaactgcaaccggtttatgaattcctcgacagttaactgc 17343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 19069234 - 19069150
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcag 92  Q
    ||||||||||||||||||||| |||  ||||||||| || ||||||||||| |||| |   | ||| ||||||||||| ||||||    
T  19069234 tcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagggggtatttgggtaatttacttgtgtttctcag 19069150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 9473687 - 9473734
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||| ||||||||||||||| ||| |||||||||||||| ||||||||    
T  9473687 tcggtagttaactgcagccgatttatgaattcctcgacaattaactgc 9473734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 17342189 - 17342142
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||| ||||||||||||||| ||| ||||||||||| |||||||||||    
T  17342189 tcggtagttaactgcagccgatttatgaattcctcggcagttaactgc 17342142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 19994315 - 19994370
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaagggg 63  Q
    |||| |||||||||||| || ||| ||||||||||| ||||||||||| |||||||    
T  19994315 tcgggagttaactgcagtcgttttatgaattcctcggcagttaactgcagaagggg 19994370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 34503756 - 34503709
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    |||| ||||||||||||| ||||| ||||||||||| |||||||||||    
T  34503756 tcggtagttaactgcagctggtttatgaattcctcggcagttaactgc 34503709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 38464796 - 38464901
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    ||||||||||||||||||||  |||||||||| || ||||||| ||| |  |||||| | |||||||||  |||  ||||  |||||||||||| |||||    
T  38464796 cagttaactgcagccggtttc-gaattcctcgtcatttaactgtcgaggaagcaaaatcatattttactcatgtacctcaaccttatgaaatgtgtcaac 38464894  T
Q  112 aataatt 118  Q
    || ||||    
T  38464895 aacaatt 38464901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 48256651 - 48256701
Alignment:
Q  70 cgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatttt 120  Q
    ||||||||||||||||| ||||| |||||||||||| | ||||| ||||||    
T  48256651 cgtattttacttgtgtgcctcagccttatgaaatgtgtgaacaacaatttt 48256701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 3450084 - 3450153
Alignment:
Q  52 ctgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttc 121  Q
    ||||||| |||||||||   ||||||||||||||| ||||| |||||||||| | ||||||  |||||||    
T  3450084 ctgccgatggggcaaaatgatattttacttgtgtgcctcagccttatgaaatatgtcaacagcaattttc 3450153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 6790306 - 6790257
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggg 62  Q
    ||||||||||||||||||||    ||||||| ||||||||||||||||||    
T  6790306 agttaactgcagccggttttatttttcctcggcagttaactgccgaaggg 6790257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 16984187 - 16984284
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||| |||  ||  | ||| |||||||||||||| |||| |||| |||  |||||| ||||| | ||| ||||| ||||||    
T  16984187 tcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttactcgtgtggcacagccttatcaaatgt 16984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 34151661 - 34151616
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaact 53  Q
    |||||||||||||||||||| |||||||||| |||| || ||||||    
T  34151661 tcggcagttaactgcagccgatttttgaattactcggcatttaact 34151616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 46097038 - 46097083
Alignment:
Q  73 attttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    |||||||| ||||||||||| |||||| ||||||||||||| ||||    
T  46097038 attttactcgtgtgtctcagccttatgcaatgtatcaacaacaatt 46097083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 15999825 - 15999909
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcag 92  Q
    ||||||||||| ||||||||| |||  |||| |||| |||||||||||||| |||| |   | ||| ||||||||||| ||||||    
T  15999825 tcggcagttaattgcagccggatttcaaatttctcggcagttaactgccgagggggtatttgggtaatttacttgtgtttctcag 15999909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 19993087 - 19993043
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactg 54  Q
    |||||||||||| ||||||||| |||||| |||| ||||||||||    
T  19993087 ggcagttaactgtagccggtttatgaatttctcggcagttaactg 19993043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 24414879 - 24414839
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaa 51  Q
    ||||||||||||| ||| ||||||||||||||| |||||||    
T  24414879 gcagttaactgcaaccgatttttgaattcctcggcagttaa 24414839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 30042525 - 30042473
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaa 59  Q
    ||||||||||||||||||||  ||||| | ||||||| || ||||||||||||    
T  30042525 ttcggcagttaactgcagccaattttttatttcctcggcacttaactgccgaa 30042473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 33051678 - 33051722
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaa 51  Q
    ||||||||||||||||||||||||||  | |||||||||| ||||    
T  33051678 ttcggcagttaactgcagccggttttctatttcctcgacacttaa 33051722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 36004306 - 36004350
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgcc 56  Q
    ||||||||| ||| |||||| | ||||||||||||||||||||||    
T  36004306 cagttaactacagtcggtttataaattcctcgacagttaactgcc 36004350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 40334520 - 40334472
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactg 54  Q
    |||||| ||||||||||||||||||||    ||||||||||||||||||    
T  40334520 tttcggtagttaactgcagccggttttatttttcctcgacagttaactg 40334472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 11739 - 11849
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||||| ||||    
T  11739 gcagttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaagtgtattttacttgtgtatctcaatcttataaaatgtgtcaa 11838  T
Q  111 caataattttc 121  Q
    ||  |||||||    
T  11839 cagcaattttc 11849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 9494832 - 9494945
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||| |  | ||||||||||||||| ||||| |||||||||||| |    
T  9494832 tcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttacttgtgtgcctcagccttatgaaatgtgt 9494931  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  9494932 caacaacaattttc 9494945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 46860553 - 46860461
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||||    
T  46860553 agttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgtaatgt 46860461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 46863373 - 46863480
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||  ||||    
T  46863373 gcagttaactgcagccggtttttcaatttctcggcagttaactgccgatggggcaaaaacgtattttacttgtgtgtctcagccttatgcaatgcgtcaa 46863472  T
Q  111 caataatt 118  Q
    ||| ||||    
T  46863473 caacaatt 46863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 30355265 - 30355375
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| ||||||||||| ||  || ||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||| |    
T  30355265 tcggcagttaactgcagccgatttttgaattcttcagcaattaactgccgagggggcaaaagcgtattttactcgtgtttctcagtcatatgaaatgtgt 30355364  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  30355365 caacaacaatt 30355375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 47060973 - 47060864
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||| |||||||||| | |    
T  47060973 tcggcagttaactacagccgatttt-gaattcctcgacagttaactgccgagggggcaaaaacgtattttacttgtatgcctcagccttatgaaatatgt 47060875  T
Q  108 caacaataatt 118  Q
    |||||||||||    
T  47060874 caacaataatt 47060864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 37340349 - 37340245
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||| ||||||||| || |||| || ||||||||| ||||| |    
T  37340349 tcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttatttatgtgccttagtcttatgtaatgtgt 37340250  T
Q  108 caaca 112  Q
    |||||    
T  37340249 caaca 37340245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 36392172 - 36392062
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||| ||| ||| |||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||| || || |||||| ||||| |    
T  36392172 tcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtgtgcctaagccttatgtaatgtgt 36392073  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  36392072 caacaacaatt 36392062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 36186499 - 36186611
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| |||||||  |||||||||| || ||||||||||| ||||||||||||||||||||| ||||| | ||| |||||| ||||| |    
T  36186499 tcggcagttaactgcaaccggtttc-gaattcctcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagccttatgcaatgtgt 36186597  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  36186598 caacaacaattttc 36186611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 28112856 - 28112776
Alignment:
Q  41 tcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttc 121  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  28112856 tcgacagttaactgccgagagggcaaaagcgtattttacttgtgtgtctcaaccttatgaaatgtgtcaacaacaattttc 28112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 21185667 - 21185556
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    |||||||||||||| ||||||||| |||||||| ||| |||||||||||||| | ||||||| |||||||||||| |||||||||   ||||| |||||     
T  21185667 ttcggcagttaactacagccggttattgaattcttcggcagttaactgccgaggaggcaaaatcgtattttacttatgtgtctcatcattatgcaatgtg 21185568  T
Q  107 tcaacaataatt 118  Q
    ||||||| ||||    
T  21185567 tcaacaacaatt 21185556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 28980198 - 28980309
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    ||||||||||||||||| |||| | |||||||| ||| ||| ||||||| || ||||||||| ||||||||||| ||||||||||| |||||| |||||     
T  28980198 ttcggcagttaactgcatccggatattgaattcttcggcagctaactgctgagggggcaaaaacgtattttactcgtgtgtctcagccttatgcaatgtg 28980297  T
Q  107 tcaacaataatt 118  Q
    ||||||| ||||    
T  28980298 tcaacaacaatt 28980309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 27453620 - 27453730
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||||||||  |||||||||||| ||| ||| || ||||| |||||| |    
T  27453620 tcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgtttctaagccttatcaaatgtgt 27453719  T
Q  108 caacaataatt 118  Q
     ||||| ||||    
T  27453720 gaacaacaatt 27453730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 48314720 - 48314611
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||  |||||||||||||||  ||||  |||||| ||||| |    
T  48314720 tcggtagttaactgcagccggttattgaattcctcggcagttaactgccg-aggggcaaaaatgtattttacttgtgtacctcaaccttatgcaatgtgt 48314622  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  48314621 caacaacaatt 48314611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 10705295 - 10705181
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| ||||| |||| |||| |||||||||||| | |||| ||||  |||||||||||||||| || || |||||||||| | |    
T  10705295 tcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtattttacttgtgtgccttagccttatgaaatatgt 10705196  T
Q  108 caacaataattttca 122  Q
    ||| || ||||||||    
T  10705195 caataacaattttca 10705181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 41049215 - 41049324
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| || |||||||| ||||||||||||| ||||| |  |||||||||||||||||| ||||  |||| |||||| ||||| |    
T  41049215 tcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaa-gaacaaaagcgtattttacttatgtgcatcagccttatgcaatgtgt 41049313  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  41049314 caacaacaatt 41049324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 47776379 - 47776282
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||| | |||| |||| |||| |||||||||| ||| ||||||||| ||||||||||| |||| |||||| ||||| ||||||    
T  47776379 tcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgtattttactcgtgtttctcagccttatcaaatgt 47776282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 48316296 - 48316383
Alignment:
Q  18 actgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||| ||||| || ||| |||||||||| | | ||||||||| | ||||||||||||||||||||| ||||||||||||    
T  48316296 actgcagccggttattgaagtcttcggcagttaactgtcaagggggcaaaaacttattttacttgtgtgtctcagccttatgaaatgt 48316383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 10708333 - 10708402
Alignment:
Q  45 cagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaat 114  Q
    ||||||||||||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||||||    
T  10708333 cagttaactgccgaaggggcaaaaatatattttactcgtgtttctcagtcttatgaaatgtgtcaacaat 10708402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 45361696 - 45361599
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||||||||| || |||||| | |||||||||  ||| ||| || ||||| ||||||    
T  45361696 tcggcagttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttactcatgtttcttagccttatcaaatgt 45361599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 21188426 - 21188472
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactg 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  21188426 tcggcagttaactgcagccggtttttgaattcctcggcagttaactg 21188472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 34622542 - 34622436
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    ||||||||||||| |||||| | ||||||||  |||||||||| | | ||||||||| ||||  ||||||||||| ||||| |||||| ||||| |||||    
T  34622542 cagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaattacttgtgtgcctcagccttatgcaatgtgtcaac 34622443  T
Q  112 aataatt 118  Q
    || ||||    
T  34622442 aacaatt 34622436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 40166787 - 40166836
Alignment:
Q  9 cggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  40166787 cggcagttaactgcagtcggtttctgaattcctcgacagttaactgccga 40166836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 34623406 - 34623510
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||| | | | ||||||||| |||||||||||||| | ||||||| ||||  ||||| ||||||||||  |||||| ||| | |    
T  34623406 tcggcagttaactgcagccgatctcttaattcctcggcagttaactgccgatgaggcaaaaacgtaaattactcgtgtgtctcaaccttatgcaatatgt 34623505  T
Q  108 caaca 112  Q
    |||||    
T  34623506 caaca 34623510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 39460597 - 39460490
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    |||||||||||||||||| |||| ||||||||| || | |||||||||  ||  |||| ||||||||||| |||| |||||  ||||| |||||||| ||    
T  39460597 gcagttaactgcagccggatttttaattcctcggcaatcaactgccgagaggataaaatcgtattttactcgtgtttctcaaccttatcaaatgtataaa 39460498  T
Q  111 caataatt 118  Q
    ||| ||||    
T  39460497 caacaatt 39460490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 42684221 - 42684280
Alignment:
Q  40 ctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatg 99  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||||||||||||| ||||||    
T  42684221 ctcgacagttaactgccgatggaacaaaaacgtattttacttgtgtgtctcagccttatg 42684280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 42499456 - 42499378
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||| ||| |||  ||||||||| || ||||||| |||||||| |||| ||||||||||| |||||    
T  42499456 tcggcagttaactgcagtcggatttcaaattcctcggcaattaactgtcgaaggggtaaaatcgtattttactggtgtg 42499378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 48269711 - 48269618
Alignment:
Q  24 gccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    ||||||| |||||||| ||| ||||||||||||||  ||| |||| | ||||||||||||||| ||||| ||||| |||||| ||||||| ||||    
T  48269711 gccggttattgaattcttcggcagttaactgccgagagggaaaaa-catattttacttgtgtgcctcagccttataaaatgtgtcaacaacaatt 48269618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 10225869 - 10225984
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatg-aaatgta 106  Q
    |||| |||||||| ||| |  |||||| |||| |||||||||||||| ||| | ||||||| | |||||||||| ||||  |||| |||||| ||||||     
T  10225869 tcggtagttaacttcagtcaatttttgcattcatcgacagttaactgtcgaggaggcaaaaacatattttacttatgtgcttcagccttatgaaaatgtg 10225968  T
Q  107 tcaacaataattttca 122  Q
    ||||||| ||||||||    
T  10225969 tcaacaacaattttca 10225984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 42682041 - 42681946
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaat 103  Q
    |||||||||||||||||| |||||||||||| ||| || ||||||| |||| | | |||||  | ||||||||| |||| ||||| ||||| ||||    
T  42682041 tcggcagttaactgcagctggtttttgaatttctcaaccgttaactaccgaggagacaaaaatgcattttacttatgtgcctcagccttataaaat 42681946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 618751 - 618801
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  618751 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 618801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 19044340 - 19044231
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||| |||||||||| ||||||   ||||||||| || |||||||||||  |  ||||| |||||||||||  |||| ||||| |||||| ||||| |    
T  19044340 tcggcaattaactgcagtcggtttca-aattcctcggcaattaactgccgagtgaacaaaaacgtattttactcatgtgcctcagccttatgcaatgtgt 19044242  T
Q  108 caacaataatt 118  Q
    |||||||||||    
T  19044241 caacaataatt 19044231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 20710296 - 20710405
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||| |||||||||| ||||||   ||||||||| || |||||||||||  |  ||||| |||||||||||  |||| ||||| |||||| ||||| |    
T  20710296 tcggcaattaactgcagtcggtttca-aattcctcggcaattaactgccgagtgaacaaaaacgtattttactcatgtgcctcagccttatgcaatgtgt 20710394  T
Q  108 caacaataatt 118  Q
    |||||||||||    
T  20710395 caacaataatt 20710405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 21190654 - 21190724
Alignment:
Q  48 ttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| || |||||| ||||| ||||||| ||||    
T  21190654 ttaactgccgagggggcaaaaacgtattttactcgtgtttcttagacttatgcaatgtgtcaacaacaatt 21190724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 29593354 - 29593432
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||||||||||||||||||||  ||  ||||||||| |||||||||| ||| |||| ||||  |||||||||| |||||    
T  29593354 tcggcagttaactgcagccggaattcaaattcctcggcagttaactgtcgagggggtaaaattgtattttactagtgtg 29593432  T

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Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 34139944 - 34139866
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||| ||| ||||||| | |||||||||||||| ||||  ||||| |||||    
T  34139944 tcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgtgtg 34139866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 29592590 - 29592529
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaag 69  Q
    ||||||||||| ||||| ||| |||  |||||||||||||||||||||| | ||||||||||    
T  29592590 tcggcagttaattgcagtcggatttcaaattcctcgacagttaactgccaagggggcaaaag 29592529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 40590549 - 40590614
Alignment:
Q  40 ctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||| |||||||||||||| ||||||||| ||||||||| | |||| |||||| ||||| ||||||    
T  40590549 ctcggcagttaactgccgagggggcaaaaacgtattttattcgtgtttctcagccttatcaaatgt 40590614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 11635770 - 11635710
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    ||||||||||||||||||  | |||| ||||||||||||||||| |||||| |||| ||||    
T  11635770 tcggcagttaactgcagcatgatttttaattcctcgacagttaaatgccgagggggaaaaa 11635710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 40142686 - 40142734
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    ||||| ||||||||||| ||||||| |||||||||||||| ||||||||    
T  40142686 ttcggtagttaactgcaaccggtttatgaattcctcgacaattaactgc 40142734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 36185842 - 36185800
Alignment:
Q  49 taactgccgaaggggcaaaagcgtattttacttgtgtgtctca 91  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||    
T  36185842 taactgccgagggggcaaaatcgtattttacttgtgtgcctca 36185800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 34742421 - 34742518
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||| | | |||  |||||||||||| ||||||||||| || | |||| ||||  ||||| ||||| | ||| ||||| ||||||    
T  34742421 tcggcagttaactgcagtcagatttctaattcctcgacaattaactgccgagggagaaaaaacgtaaattactcgtgtgccacagccttatcaaatgt 34742518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 21799078 - 21799130
Alignment:
Q  7 ttcggcagttaactgcagccggtttttg-aattcctcgacagttaactgccga 58  Q
    |||||||||||||||| | ||||||||  ||||||||| ||||||||||||||    
T  21799078 ttcggcagttaactgctgtcggtttttttaattcctcgtcagttaactgccga 21799130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 41623893 - 41623945
Alignment:
Q  60 ggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaaca 112  Q
    ||||||||| ||||||||||||||||| ||||  |||||| ||||| ||||||    
T  41623893 ggggcaaaaacgtattttacttgtgtgcctcaaccttatgtaatgtgtcaaca 41623945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 48194628 - 48194696
Alignment:
Q  37 ttcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||| ||||| |||||||||||||| |||  |||||| |||| || ||| |||||| |||||    
T  48194628 ttcctcgacagctaactaccgaaggggcaaaaacgtcatttactcgtgtatcacagccttatgtaatgt 48194696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 28611126 - 28611223
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||   ||||||||||||||||||||| ||||||||||||    
T  28611126 tcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatattttacttgtgtgtctcagccttatgaaatgt 28611223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 19454351 - 19454461
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| ||| ||||||||||||||  ||||||||||||||  |||||||||||||||||||| ||||||||||  |||||| |||||||    
T  19454351 tcggcagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatgtat 19454450  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  19454451 caacaacaatt 19454461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 66947 - 66843
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||| |||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||| |    
T  66947 tcggtagttaactgcagccggtttt-gaatacctcggcagttaactgccgagggggcaaaagcgtattttactcgtgtgtctcagccttatcaaatgtgt 66849  T
Q  108 caacaa 113  Q
    ||||||    
T  66848 caacaa 66843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 29929473 - 29929360
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||| || |||||| | ||||||||||||||| ||||| ||||| |||||| |    
T  29929473 tcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttacttgtgtgcctcagccttataaaatgtgt 29929374  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  29929373 caacaacaattttc 29929360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 29978627 - 29978514
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||| || |||||| | ||||||||||||||| ||||| ||||| |||||| |    
T  29978627 tcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttacttgtgtgcctcagccttataaaatgtgt 29978528  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  29978527 caacaacaattttc 29978514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 7247890 - 7248006
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| | ||||| ||||| |||||  ||||| |||||    
T  7247890 cagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtattttattcgtgtgcctcagccttatccaatgtgtcaac 7247989  T
Q  112 aataattttcagaataa 128  Q
    || |||| ||| |||||    
T  7247990 aacaattctcataataa 7248006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 55207691 - 55207793
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatca 109  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||||| |||    
T  55207691 ggcagttaactgcaaccggtttttgaattcttcggcagttaactgccgatggggcaaaagagtattttactcgtgtttctcagccatatgaaatgtgtca 55207790  T
Q  110 aca 112  Q
    |||    
T  55207791 aca 55207793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 45101874 - 45101987
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||  |||| |||||||||||| |||| ||||  |||||||||||| |    
T  45101874 tcggcagttaactgcagccggtttttgaattcctcaacaattaactgccgaggggataaaaacgtattttacttatgtgcctcaaccttatgaaatgtgt 45101973  T
Q  108 caacaataattttc 121  Q
    | |||| |||||||    
T  45101974 cgacaacaattttc 45101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 46344984 - 46344901
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctca 91  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||   ||||||||||||||| ||||    
T  46344984 tcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttacttgtgtgcctca 46344901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 2432973 - 2433079
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||| ||||| ||||| |||||| ||||| |||||    
T  2432973 cagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtattttactcgtgtgcctcagccttatgcaatgtgtcaac 2433072  T
Q  112 aataatt 118  Q
    || ||||    
T  2433073 aacaatt 2433079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 29918367 - 29918480
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||| |||||  ||| ||||||| |||||| ||| ||||| |||||||||||| |||| ||||| |||||||||| | |    
T  29918367 tcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttacttatgtgcctcagccttatgaaatatgt 29918466  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  29918467 caacaacaattttc 29918480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 29967520 - 29967633
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||||| |||||  ||| ||||||| |||||| ||| ||||| |||||||||||| |||| ||||| |||||||||| | |    
T  29967520 tcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttacttatgtgcctcagccttatgaaatatgt 29967619  T
Q  108 caacaataattttc 121  Q
    |||||| |||||||    
T  29967620 caacaacaattttc 29967633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 48888787 - 48888667
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||| |||| ||||||||| |||| ||||||||| ||||||    ||||||||||||||||| |||||||||||||||| | |    
T  48888787 tcggcagttaactgcagccggatttttaattcctcggcagt-aactgccgagggggcatttacgtattttacttgtgtgcctcagtcttatgaaatatgt 48888689  T
Q  108 caacaataattttcagaataaa 129  Q
     |||| ||||||||| ||||||    
T  48888688 gaacagtaattttcaaaataaa 48888667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 19440303 - 19440199
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||||| | ||||||||  ||||||||| ||||| |||||  ||||| |||||||    
T  19440303 tcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgaggaggcaaaagtttattttactcgtgtgcctcagctttatgcaatgtat 19440204  T
Q  108 caaca 112  Q
    |||||    
T  19440203 caaca 19440199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 30256029 - 30256143
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| || | ||||||     |||||||||||||||| |||||  ||||||||||| |    
T  30256029 tcggcagttaactgcagccggttttttaattcctcggcagttaactaccaagggggcatttatgtattttacttgtgtgcctcagctttatgaaatgtgt 30256128  T
Q  108 caacaataattttca 122  Q
    |||||| ||||||||    
T  30256129 caacaacaattttca 30256143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 41579750 - 41579860
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||||||||||||||| |||||||||||  || ||||||||||| |||| |||| |||||||||||| |||| ||||| |||||| || || |    
T  41579750 tcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattttacttatgtgcctcagccttatgcaacgtgt 41579849  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  41579850 caacaacaatt 41579860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 41803045 - 41802948
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||  |||||||| ||||||||||| || | |||||| | ||||||||||    
T  41803045 tcggcagttaactgcagccggtttttaaattcttcggcagttaactgccgagtgggcaaaaacgtattttactcgtatttctcagccatatgaaatgt 41802948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 42804503 - 42804398
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    ||||||||||||||||| |  |||||| ||||||||| |||||||||  ||| ||||| |||| |||||||||||||||| ||||| ||||||||||||     
T  42804503 ttcggcagttaactgcaactagttttttaattcctcggcagttaactatcgagggggctaaagtgtattttacttgtgtgcctcagccttatgaaatgtg 42804404  T
Q  107 tcaaca 112  Q
    ||||||    
T  42804403 tcaaca 42804398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 7839525 - 7839609
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcag 92  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||  ||||| |||| ||||||    
T  7839525 tcggtagttaactgcagccggtttttgaattcctcgacagtttactgccgagggggcaaaaacgtaaattactcgtgtatctcag 7839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 55267490 - 55267378
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||| ||||||||||||| ||||||||||| ||| |||||||||| ||| ||||||||| ||||  ||||| ||||||||||| |||||| || ||    
T  55267490 tttcggcaattaactgcagccgatttttgaattcttcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgtctcagccttatgcaacgt 55267391  T
Q  106 atcaacaataatt 118  Q
     ||||||| ||||    
T  55267390 gtcaacaacaatt 55267378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 43571713 - 43571824
Alignment:
Q  10 ggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatca 109  Q
    ||||||||||||||||||  |||||||||||||  |||||||||||||| ||||||||| | ||||||||||||||  || |  |||||| ||||| |||    
T  43571713 ggcagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattttacttgtgtacctgaaccttatgtaatgtgtca 43571812  T
Q  110 acaataattttc 121  Q
    |||| |||||||    
T  43571813 acaacaattttc 43571824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 11380488 - 11380378
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| ||   |||| ||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||| || |  |||||| |    
T  11380488 tcggcagttaactgcaaccatatttttaattcctcggcagttaactgccgaaggggcaaaaacgtattttactcgtgtttctcagcctaaccaaatgtgt 11380389  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  11380388 caacaacaatt 11380378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 41577118 - 41577012
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaac 111  Q
    |||||||||||| ||| ||||| ||||| |||||||||||||| ||||  ||||||| ||||||||| |||| | |||||| |||||||||||| |||||    
T  41577118 cagttaactgcaaccgattttttaattcatcgacagttaactgtcgaaaaggcaaaaacgtattttatttgtatttctcagccttatgaaatgtgtcaac 41577019  T
Q  112 aataatt 118  Q
    || ||||    
T  41577018 aacaatt 41577012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 52567810 - 52567700
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| |||||||| ||||||||||  ||| ||||||||||||||   ||||||| ||||||||||| ||||| ||||| |||||| || ||||    
T  52567810 tcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttactcgtgtgcctcagccttatgcaacgtat 52567711  T
Q  108 caacaataatt 118  Q
    |||||| ||||    
T  52567710 caacaacaatt 52567700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 23443132 - 23443229
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||||||||  ||  ||||||||| |||||||||||||| |||| |||| ||||||||||| ||||||| ||| ||||| ||||||    
T  23443132 tcggcagttaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtgtcacagccttatcaaatgt 23443229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 42756206 - 42756101
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||| || ||||||||| |||||||||||  ||| ||| |  ||||| |||||| |    
T  42756206 tcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtattttactcatgtttctgaaccttatcaaatgtgt 42756107  T
Q  108 caacaa 113  Q
    ||||||    
T  42756106 caacaa 42756101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 52570592 - 52570694
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||| |||||||||||| |||||||||||||| ||| ||||||||||||| ||||| |||| ||||||||| | ||||| ||||| |||||| ||||| |    
T  52570592 tcggtagttaactgcagtcggtttttgaattcttcggcagttaactgccg-aggggaaaaaacgtattttaatcgtgtgcctcagccttatgcaatgtgt 52570690  T
Q  108 caac 111  Q
    ||||    
T  52570691 caac 52570694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 41805701 - 41805811
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| |||||||||| ||| ||||| |||||||||||||||||| |  |||||| ||||  ||||||||||| ||||| |||||| ||||| |    
T  41805701 tcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcctcagccttatgcaatgtgt 41805800  T
Q  108 caacaataatt 118  Q
    || ||| ||||    
T  41805801 catcaacaatt 41805811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 49268871 - 49268967
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatg 104  Q
    |||||||||||||||| |||| |||| |||||||| ||||||||| || |||||| ||||| | ||||||||| |||| |||||| || ||||||||    
T  49268871 tcggcagttaactgcaaccggatttttaattcctccacagttaacggctgaagggacaaaatcatattttactggtgtttctcagcctaatgaaatg 49268967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 49196475 - 49196570
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaat 103  Q
    |||| ||||||||||| |||| |||| |||||||||||||||| ||  ||| ||||||||| ||||||||||| |||| |||||| ||||| ||||    
T  49196475 tcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttactcgtgtttctcagccttatcaaat 49196570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 49219817 - 49219915
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgta 106  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||| |||| | |||||||  |||||||||| ||||| | ||| ||||| |||||||    
T  49219817 tcggcagttaactgcagccggatttctaattcctcggcagttaactaccgaggaggcaaaattgtattttactagtgtggcacagccttatcaaatgta 49219915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 34691668 - 34691575
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||| |||| | ||||||| |||||||||||||| | |||||||  |||||||||| |||| ||||||  |||| ||||||    
T  34691668 cagttaactgcagccggatttttatttcctcggcagttaactgccgaggaggcaaaattgtattttactagtgtttctcagcgttatcaaatgt 34691575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 50216880 - 50216940
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||||||| | |||||||||    
T  50216880 tcggcagttaactgcagccggatttttaattcctcggcagttaactgccaatggggcaaaa 50216940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 6489376 - 6489276
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||| | ||||||||| |    ||||||||| ||||||||| ||||  ||||||||||| ||||  |||||| ||||| |    
T  6489376 tcggcagttaactgcagccggtttcttaattcctcggc----aactgccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatgcaatgtgt 6489281  T
Q  108 caaca 112  Q
    |||||    
T  6489280 caaca 6489276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 42807655 - 42807738
Alignment:
Q  37 ttcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatttt 120  Q
    |||||||||||||||||||||| | |||||||  |||||||| |||||||  |||| |||||||||||| | ||||| ||||||    
T  42807655 ttcctcgacagttaactgccgaggaggcaaaaatgtattttatttgtgtgcatcagccttatgaaatgtgttaacaacaatttt 42807738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 48892150 - 48892196
Alignment:
Q  7 ttcggcagttaactgcagccggtttttgaattcctcgacagttaactg 54  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48892150 ttcggcagttaactgcagccggttttt-aattcctcgacagttaactg 48892196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 6505977 - 6506087
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    |||||||||||||||||||||||| | ||||||| | ||||||||| | || ||| ||||| ||||  ||||| ||||| ||||| |||||  ||||| |    
T  6505977 tcggcagttaactgcagccggtttcttaattccttggcagttaacttctgaggggacaaaaacgtaaattactcgtgtgcctcagccttatacaatgtgt 6506076  T
Q  108 caacaataatt 118  Q
    ||||| |||||    
T  6506077 caacagtaatt 6506087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 41137765 - 41137687
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||| || || |||||| | ||||||||| |||||    
T  41137765 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgctgatggagcaaaaacatattttactagtgtg 41137687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 7837637 - 7837529
Alignment:
Q  13 agttaactgcagccggtttttgaattcctc--gacagtt-aactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatca 109  Q
    |||||||||||||||||||||||| |||||  | ||||| ||||| ||| |||| |||| | ||  ||||||||||||||||| |||||| ||||| |||    
T  7837637 agttaactgcagccggtttttgaaatcctctcggcagtttaactgtcgagggggaaaaaacttaaattacttgtgtgtctcagccttatgcaatgtgtca 7837538  T
Q  110 acaataatt 118  Q
    |||| ||||    
T  7837537 acaacaatt 7837529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 20366236 - 20366191
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgcc 56  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20366236 gcagttaactgcagctggtttttgaattcctcggcagttaactgcc 20366191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 34694460 - 34694517
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggca 65  Q
    ||||||||| ||||||||||| |||  |||||||||||||||||||||||| ||||||    
T  34694460 tcggcagtttactgcagccggatttctaattcctcgacagttaactgccgagggggca 34694517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 43568920 - 43568859
Alignment:
Q  61 gggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttca 122  Q
    |||||||||||||||||||| |||| |||||| ||||| |||||| ||||||| ||||||||    
T  43568920 gggcaaaagcgtattttactcgtgtttctcagccttataaaatgtgtcaacaacaattttca 43568859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 45098880 - 45098829
Alignment:
Q  6 tttcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  45098880 tttcggcaattaactgcagccg-tttttgaattcctcggcagttaactgccga 45098829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 2743445 - 2743395
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  2743445 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 2743395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 7841168 - 7841058
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtat 107  Q
    ||||||||||| ||||||| | |||  |||||||||  |||||| |||||| |||||||||  |||||||||| ||||| | ||| ||||| ||||||      
T  7841168 tcggcagttaaatgcagccagatttcaaattcctcggtagttaattgccgagggggcaaaattgtattttactagtgtgacacagccttatcaaatgtgg 7841069  T
Q  108 caacaataatt 118  Q
     ||||||||||    
T  7841068 gaacaataatt 7841058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 9582594 - 9582548
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactg 54  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  9582594 tcggcagttaactgcagtcggtttttgaatttctcggcagttaactg 9582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 13743340 - 13743290
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  13743340 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 13743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 13896906 - 13897004
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaa 110  Q
    ||||||||||||||| ||| || ||||| ||  || ||||||||||| | | ||||| | ||||||||| |||||||| || |||||| ||||||||||    
T  13896906 cagttaactgcagccagttattaaattcttcagcaattaactgccgaggagtcaaaaacatattttactcgtgtgtcttagccttatgcaatgtatcaa 13897004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 19341620 - 19341698
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    |||| |||||||||||||||| |||  ||||||||| |||||||||||||| ||| ||||| ||||  ||||| |||||    
T  19341620 tcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaaacgtaacttactcgtgtg 19341698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 14402996 - 14403057
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaag 69  Q
    ||||||||||||| | ||||| |||  ||||||||| |||||||||||||| ||||||||||    
T  14402996 tcggcagttaactaccgccggatttcaaattcctcggcagttaactgccgagggggcaaaag 14403057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 48250895 - 48250955
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    |||||||||||||||||||||  ||  ||||||||  |||||||||||||| |||||||||    
T  48250895 tcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgagggggcaaaa 48250955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 14043924 - 14043978
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggg 62  Q
    |||||||||||||||||||| ||||  ||  | ||||||||||||||||||||||    
T  14043924 tcggcagttaactgcagccgattttctaaaacttcgacagttaactgccgaaggg 14043978  T

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Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 24700768 - 24700718
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    |||| ||||||||||| |||| |||  ||||||||||||||||||||||||    
T  24700768 tcgggagttaactgcaaccggatttctaattcctcgacagttaactgccga 24700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 30252613 - 30252563
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||| |||||||||||  | ||||||||||||||||| ||||    
T  30252613 tcggcagttaactacagccggttttgtatttcctcgacagttaactaccga 30252563  T

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Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 43268373 - 43268419
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccg 57  Q
    |||||||||||||||||   ||| |||||||||||||||||||||||    
T  43268373 gcagttaactgcagccgtgattttaattcctcgacagttaactgccg 43268419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 4002531 - 4002591
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaag 69  Q
    ||||||||||||||||||||| |||  ||||||||   |||||||||||| |||||||||||    
T  4002531 tcggcagttaactgcagccggatttcaaattcctcagtagttaactgccg-aggggcaaaag 4002591  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 34722298 - 34722221
Alignment:
Q  41 tcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataatt 118  Q
    ||||||||||||||| |  ||| ||||| ||||||||||| |||| |||||| ||||| |||||| | ||||| ||||    
T  34722298 tcgacagttaactgcagccgggacaaaatcgtattttactcgtgtttctcagccttatcaaatgtgtaaacaacaatt 34722221  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 2271339 - 2271391
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaag 60  Q
    ||||||||||||||||||||| |||  ||  | ||||||||||||||||||||    
T  2271339 tcggcagttaactgcagccggatttctaaaacttcgacagttaactgccgaag 2271391  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 16647173 - 16647233
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    ||||||||||||||||||||| |||  ||  | ||| |||||||||||||| |||||||||    
T  16647173 tcggcagttaactgcagccggatttctaaaacatcggcagttaactgccgagggggcaaaa 16647233  T

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Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 46993226 - 46993294
Alignment:
Q  37 ttcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||||||||||||||| ||||||||| |||  |||||| || || | ||| ||||| ||||||    
T  46993226 ttcctcgacagttaactgccgagggggcaaaaacgtcatttactcgtatggcacagccttatcaaatgt 46993294  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 55385184 - 55385124
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaa 68  Q
    ||||||||||||||||||||| |||  ||  | ||| |||||||||||||| |||||||||    
T  55385184 tcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaa 55385124  T

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Target: scaffold0618 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 3932 - 3850
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctca 91  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||   ||||||||||||||| ||||    
T  3932 tcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaa-aatattttacttgtgtgcctca 3850  T

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Target: scaffold0192 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 16439 - 16345
Alignment:
Q  27 ggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttca 122  Q
    ||||||| |||| |||||||||||||| |||| ||||||||| | |||||| | |||||| |||||||||||||||||| ||||||||||||||||    
T  16439 ggtttttcaatttctcgacagttaactaccgagggggcaaaaacatatttt-catgtgtgcctcagtcttatgaaatgtgtcaacaataattttca 16345  T

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Target: scaffold1379 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 464 - 557
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||||||||| || | ||||| ||| |||||||||||||| || |||||| ||||||||||| |||| |||||||||||| ||||||    
T  464 cagttaactgcagccggattattaattcttcggcagttaactgccgagggagcaaaatcgtattttactcgtgtttctcagtcttatcaaatgt 557  T

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Target: scaffold0341 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 17377 - 17455
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||||| |||| |||| ||||||||||| |||||    
T  17377 tcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtg 17455  T

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Target: scaffold0012 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 232595 - 232523
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttact 80  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||  |||| |||||||||||    
T  232595 tcggcagttaactgcagtcggatttttaattcctcgacagttaactgccgaggggataaaatcgtattttact 232523  T

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Target: scaffold0219 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 15750 - 15704
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactg 54  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  15750 tcggcagttaactgcaaccggtttttgaattcctcgacagttaactg 15704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 20142 - 20236
Alignment:
Q  12 cagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggc-aaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||  ||| ||| |||| ||||  ||||| ||||||||||| |||||| |||||    
T  20142 cagttaactgtagccgatttttgaattcctcggcagttaactgctaaagaggcaaaaaacgtaaattactcgtgtgtctcagccttatgcaatgt 20236  T

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Target: scaffold0116 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 11348 - 11251
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    |||| ||||||||||||||||  ||  ||||||||| |||||||||||||| |||| |||| ||||||||||| ||||| | ||| ||||| ||||||    
T  11348 tcggaagttaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcaaatgt 11251  T

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Target: scaffold0116; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 15981 - 16040
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaa 67  Q
    |||||||||||||||||| || |||  ||||||||| |||||||||||||| || |||||    
T  15981 tcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgagggagcaaa 16040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 18078 - 18000
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||| ||| ||||||||| ||||  ||||| |||||    
T  18078 tcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtg 18000  T

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Target: scaffold0078 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 54766 - 54844
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||| ||| ||||||||| ||||  ||||| |||||    
T  54766 tcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtg 54844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 878 - 800
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||| ||||||  |||  ||||||| | |||||||||||||| |||| |||| ||||||||||| |||||    
T  878 tcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggggtaaaatcgtattttactggtgtg 800  T

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Target: scaffold0201 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 22447 - 22389
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaag 69  Q
    |||||||||||||||||  |||  ||||||||| |||||||||||||| ||||||||||    
T  22447 gcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaag 22389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 869 - 791
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||||||||| |||  ||||| ||| ||||||| | |||||||||||||| ||||  ||||| |||||    
T  869 tcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgtgtg 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 1207 - 1303
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgt 105  Q
    ||||||||||| ||| ||||||||   ||||||||| |||||||||||||| ||| ||||| ||||  ||||| ||||| ||||| |||||| |||||    
T  1207 tcggcagttaattgctgccggtttca-aattcctcggcagttaactgccgaggggacaaaaacgtaaattactcgtgtgcctcagccttatgcaatgt 1303  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 23253 - 23322
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtatttt 77  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||| |  ||| ||| ||||| ||||||||    
T  23253 tcggtagttaactgcagccgatttttaaattcctcgacagttaaatatcgatgggacaaaatcgtatttt 23322  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 4433 - 4504
Alignment:
Q  15 ttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtg 86  Q
    ||||||||||||||  ||  ||||||||| |||||||||||||| || | |||| ||||||||||| |||||    
T  4433 ttaactgcagccggagttcaaattcctcggcagttaactgccgagggagtaaaatcgtattttactagtgtg 4504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 7330 - 7425
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaat 103  Q
    ||||||||| | |||||||||||||||||||||||  || ||||||| | | | ||||||| | |||||||||  |||| ||||  ||||||||||    
T  7330 tcggcagttgattgcagccggtttttgaattcctcagcaattaactgtcaaggaggcaaaaacatattttactcatgtgcctcaaccttatgaaat 7425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 790 - 832
Alignment:
Q  13 agttaactgcagccggtttttgaattcctcgacagttaactgc 55  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||    
T  790 agttaacagcagccggtttatgaattcctcggcagttaactgc 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 11827 - 11777
Alignment:
Q  8 tcggcagttaactgcagccggtttttgaattcctcgacagttaactgccga 58  Q
    ||||||||||||||||||||| |||  |||||||||  |||||||||||||    
T  11827 tcggcagttaactgcagccggatttcaaattcctcggtagttaactgccga 11777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 865 - 934
Alignment:
Q  52 ctgccgaaggggcaaaagcgtattttacttgtgtgtctcagtcttatgaaatgtatcaacaataattttc 121  Q
    ||||||| |||||||||   ||||||||||||||| ||||| |||||||||| | ||||||  |||||||    
T  865 ctgccgatggggcaaaatgatattttacttgtgtgcctcagccttatgaaatatgtcaacagcaattttc 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 1686 - 1718
Alignment:
Q  11 gcagttaactgcagccggtttttgaattcctcg 43  Q
    |||||||||||||| ||||||||||||||||||    
T  1686 gcagttaactgcagtcggtttttgaattcctcg 1718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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