View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2334_high_11 (Length: 227)
Name: NF2334_high_11
Description: NF2334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2334_high_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 41429621 - 41429401
Alignment:
| Q |
7 |
atatctacctctataatcaataaccagttaaccacaacgaaggacaatcagtattgttgatcgatatagagtggaagctaaaaatataactcgtctttac |
106 |
Q |
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| T |
41429621 |
atatctacctctataatcaataaccagttaaccacaacgaagcacaatcagtattgttgatcgatatagagtggaagctaaaaatataactcgtctttac |
41429522 |
T |
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| Q |
107 |
aggaaaactcaaacattctatcattaaaactgtcaatttgtaacaactcaatgcatttgggtgatcactgacgggtcactatattatagatcaggttgga |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41429521 |
aggaaaactcaaacattctatcattaaaactgtcaatttgtaacaactcaatgcatttgggtgatcactgacgggtcactatattatagatcaggttgga |
41429422 |
T |
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| Q |
207 |
tttgccaaattaattacgaac |
227 |
Q |
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|||||| |||||||||||||| |
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| T |
41429421 |
tttgcccaattaattacgaac |
41429401 |
T |
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