View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2335_high_12 (Length: 363)

Name: NF2335_high_12
Description: NF2335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2335_high_12
NF2335_high_12
[»] chr1 (23 HSPs)
chr1 (109-313)||(24479150-24479333)
chr1 (2-67)||(46432388-46432453)
chr1 (2-64)||(21148048-21148110)
chr1 (2-67)||(24962020-24962085)
chr1 (2-64)||(29182173-29182234)
chr1 (2-67)||(24749865-24749930)
chr1 (2-67)||(43706826-43706890)
chr1 (2-67)||(51719293-51719358)
chr1 (2-67)||(19078097-19078161)
chr1 (2-67)||(19125987-19126051)
chr1 (2-67)||(24196328-24196393)
chr1 (2-67)||(3616866-3616931)
chr1 (3-63)||(18606857-18606917)
chr1 (23-67)||(28920844-28920888)
chr1 (2-67)||(4059694-4059759)
chr1 (2-67)||(48472035-48472100)
chr1 (23-67)||(16551837-16551881)
chr1 (2-64)||(2260551-2260611)
chr1 (2-64)||(4455215-4455277)
chr1 (2-67)||(2425292-2425355)
chr1 (2-67)||(22786097-22786161)
chr1 (31-67)||(2657713-2657749)
chr1 (2-65)||(29676148-29676211)
[»] chr5 (23 HSPs)
chr5 (2-67)||(31055486-31055551)
chr5 (2-67)||(25557047-25557112)
chr5 (23-67)||(31648122-31648166)
chr5 (2-67)||(26639209-26639274)
chr5 (2-67)||(245662-245726)
chr5 (2-67)||(16901169-16901233)
chr5 (2-67)||(18695071-18695135)
chr5 (2-67)||(38408696-38408760)
chr5 (2-63)||(38476642-38476703)
chr5 (2-65)||(10379351-10379413)
chr5 (2-64)||(41663696-41663756)
chr5 (2-67)||(8645864-8645929)
chr5 (2-67)||(10293259-10293324)
chr5 (23-65)||(16307670-16307712)
chr5 (2-63)||(23765562-23765622)
chr5 (2-63)||(23815410-23815470)
chr5 (2-67)||(36641210-36641275)
chr5 (2-67)||(19169410-19169475)
chr5 (2-64)||(17825670-17825731)
chr5 (2-64)||(20653890-20653951)
chr5 (2-67)||(15885336-15885401)
chr5 (2-63)||(34125130-34125191)
chr5 (82-111)||(38408622-38408651)
[»] scaffold1202 (1 HSPs)
scaffold1202 (2-67)||(1946-2011)
[»] chr6 (25 HSPs)
chr6 (2-67)||(18749300-18749365)
chr6 (2-67)||(18791424-18791489)
chr6 (2-67)||(22968326-22968391)
chr6 (2-67)||(23820002-23820067)
chr6 (2-67)||(24603428-24603493)
chr6 (2-67)||(34833992-34834057)
chr6 (2-67)||(2058994-2059059)
chr6 (2-67)||(3118746-3118811)
chr6 (1-67)||(24051075-24051141)
chr6 (2-67)||(4597577-4597642)
chr6 (2-67)||(14572350-14572414)
chr6 (2-67)||(15298552-15298617)
chr6 (2-67)||(4370965-4371029)
chr6 (2-67)||(8412825-8412890)
chr6 (2-67)||(22269475-22269538)
chr6 (2-64)||(19282383-19282445)
chr6 (2-64)||(26240025-26240088)
chr6 (2-64)||(31210864-31210926)
chr6 (2-67)||(26710479-26710544)
chr6 (2-67)||(32451793-32451858)
chr6 (2-65)||(32682450-32682512)
chr6 (2-64)||(4013839-4013900)
chr6 (2-67)||(25819752-25819816)
chr6 (2-55)||(35102663-35102716)
chr6 (2-67)||(12427298-12427363)
[»] chr3 (25 HSPs)
chr3 (2-67)||(23428791-23428856)
chr3 (2-67)||(46673219-46673284)
chr3 (23-67)||(8339133-8339177)
chr3 (2-65)||(4522023-4522086)
chr3 (2-65)||(20001778-20001841)
chr3 (2-67)||(8542677-8542742)
chr3 (2-67)||(26628197-26628262)
chr3 (2-67)||(27852923-27852988)
chr3 (2-67)||(48907464-48907529)
chr3 (2-67)||(25022835-25022900)
chr3 (2-67)||(3780948-3781010)
chr3 (2-67)||(22447916-22447981)
chr3 (2-67)||(22500767-22500832)
chr3 (2-67)||(30155317-30155382)
chr3 (2-67)||(13080961-13081026)
chr3 (27-67)||(32960807-32960847)
chr3 (2-63)||(3328985-3329046)
chr3 (2-64)||(10743478-10743539)
chr3 (23-65)||(25179647-25179689)
chr3 (2-63)||(48860773-48860834)
chr3 (2-67)||(28173901-28173966)
chr3 (2-55)||(28155054-28155107)
chr3 (2-67)||(40836351-40836414)
chr3 (23-67)||(3820982-3821024)
chr3 (2-67)||(4775918-4775982)
[»] chr2 (15 HSPs)
chr2 (2-67)||(4587928-4587993)
chr2 (2-67)||(22191113-22191178)
chr2 (2-67)||(11175974-11176039)
chr2 (2-67)||(18538000-18538065)
chr2 (2-67)||(25298973-25299038)
chr2 (2-64)||(2986756-2986818)
chr2 (2-67)||(6763889-6763954)
chr2 (2-67)||(9051199-9051264)
chr2 (2-67)||(30714446-30714511)
chr2 (2-67)||(38716260-38716325)
chr2 (2-67)||(15700814-15700879)
chr2 (2-67)||(15735131-15735196)
chr2 (1-67)||(36464341-36464405)
chr2 (2-67)||(9787626-9787691)
chr2 (2-64)||(43301725-43301786)
[»] scaffold0179 (1 HSPs)
scaffold0179 (2-67)||(5821-5886)
[»] scaffold0025 (2 HSPs)
scaffold0025 (2-67)||(61881-61946)
scaffold0025 (2-67)||(19351-19414)
[»] chr8 (21 HSPs)
chr8 (2-67)||(4519039-4519104)
chr8 (2-67)||(17648310-17648375)
chr8 (2-67)||(19391559-19391624)
chr8 (2-67)||(30784436-30784501)
chr8 (2-67)||(5192443-5192508)
chr8 (2-67)||(21929975-21930039)
chr8 (2-67)||(44147039-44147103)
chr8 (3-67)||(8802572-8802636)
chr8 (2-67)||(21666446-21666511)
chr8 (2-67)||(32400494-32400559)
chr8 (2-65)||(33895443-33895506)
chr8 (2-67)||(1824674-1824736)
chr8 (2-67)||(1859119-1859181)
chr8 (2-67)||(12723433-12723498)
chr8 (2-67)||(19924332-19924397)
chr8 (2-63)||(38630126-38630187)
chr8 (2-66)||(22452345-22452409)
chr8 (2-64)||(3208050-3208111)
chr8 (2-63)||(18253059-18253117)
chr8 (2-65)||(4807772-4807836)
chr8 (27-67)||(23565188-23565228)
[»] chr7 (27 HSPs)
chr7 (2-67)||(2331080-2331145)
chr7 (2-67)||(20636686-20636751)
chr7 (2-67)||(20638558-20638623)
chr7 (2-67)||(27869367-27869432)
chr7 (2-67)||(35337694-35337759)
chr7 (2-67)||(42271399-42271464)
chr7 (2-66)||(21224524-21224588)
chr7 (2-67)||(3562605-3562669)
chr7 (2-67)||(19195385-19195450)
chr7 (2-67)||(24597687-24597752)
chr7 (2-67)||(41452421-41452486)
chr7 (2-67)||(11843350-11843414)
chr7 (2-67)||(13577958-13578021)
chr7 (2-67)||(18754438-18754503)
chr7 (2-67)||(21225720-21225784)
chr7 (2-67)||(26385328-26385392)
chr7 (2-67)||(48176135-48176199)
chr7 (2-49)||(26126339-26126385)
chr7 (2-64)||(3403224-3403286)
chr7 (2-67)||(17305832-17305896)
chr7 (2-67)||(31493978-31494042)
chr7 (2-67)||(4571516-4571579)
chr7 (2-67)||(8526863-8526928)
chr7 (6-64)||(15681667-15681725)
chr7 (2-66)||(36746675-36746739)
chr7 (2-42)||(24448216-24448256)
chr7 (2-65)||(24464646-24464707)
[»] chr4 (24 HSPs)
chr4 (2-67)||(13397847-13397912)
chr4 (2-67)||(15058990-15059055)
chr4 (2-67)||(41877198-41877263)
chr4 (2-67)||(43793803-43793868)
chr4 (2-67)||(19232516-19232581)
chr4 (2-66)||(4433355-4433419)
chr4 (8-67)||(25011802-25011861)
chr4 (2-64)||(4098726-4098788)
chr4 (2-64)||(9195836-9195897)
chr4 (17-67)||(55780454-55780504)
chr4 (17-67)||(55844634-55844684)
chr4 (2-63)||(1588585-1588645)
chr4 (2-67)||(35475358-35475421)
chr4 (2-67)||(5304519-5304583)
chr4 (2-67)||(13826591-13826655)
chr4 (2-63)||(2931392-2931453)
chr4 (2-67)||(27018282-27018346)
chr4 (31-67)||(6789159-6789195)
chr4 (23-67)||(25618789-25618833)
chr4 (5-64)||(6209417-6209475)
chr4 (2-67)||(4357319-4357384)
chr4 (2-67)||(41034703-41034768)
chr4 (2-47)||(24626393-24626438)
chr4 (31-67)||(45633504-45633540)
[»] scaffold0087 (1 HSPs)
scaffold0087 (2-63)||(25136-25197)
[»] scaffold0607 (1 HSPs)
scaffold0607 (2-67)||(2221-2286)
[»] scaffold0419 (1 HSPs)
scaffold0419 (2-67)||(3132-3197)
[»] scaffold0267 (1 HSPs)
scaffold0267 (2-67)||(3740-3803)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-67)||(142119-142183)
[»] scaffold0062 (2 HSPs)
scaffold0062 (2-67)||(49726-49791)
scaffold0062 (2-67)||(62265-62330)
[»] scaffold0683 (1 HSPs)
scaffold0683 (23-67)||(5356-5400)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-64)||(455000-455061)


Alignment Details
Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 109 - 313
Target Start/End: Original strand, 24479150 - 24479333
Alignment:
Q  109 tttagagcttgtccattttttcaaactgtcagaacttgaaatatctttggtttcactctagagcattggatatgtgagtttcttttcaagtcatcattct 208  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||                    |||||||||    
T  24479150 tttagagcttgtccattttttcaaactgtc-gaacttgaaatatctttggttttactctagagcattagat--------------------catcattct 24479228  T
Q  209 ccggtgctcaaagcaactttccatctccctatgtgtagaaaataacaacacaataaatactaacatctcgaaagtgtctcccgtaaatttttaatagtag 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24479229 ccggtgctcaaagcaactttccatctccctatgtgtagaaaataacaacacaataaatactaacatctcgaaagtgtctcccgtaaatttttaatagtag 24479328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 46432388 - 46432453
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  46432388 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 46432453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 21148110 - 21148048
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| |||||||||||||    
T  21148110 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 21148048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 24962085 - 24962020
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  24962085 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 24962020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 29182173 - 29182234
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    |||||||||||||||| ||| ||||||| |||||||||| |||||||||||||||||||||||    
T  29182173 atatttcccttatgtt-aggggtcaaaagagcatatttctctaaacataaggggtcacttttg 29182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 24749930 - 24749865
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  |  ||||||| |||||||||||||||||||| ||||||||||||||||    
T  24749930 atatttcccttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 24749865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 43706826 - 43706890
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  43706826 atatttcccttatgttatgg-gtcaaaagagcatatttccctaaacatagggggtcacttttgcca 43706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 51719293 - 51719358
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| |||||||||  ||  |||||| |||||||||||||||||||||||||||||||||||||    
T  51719293 atattttccttatgttaggggatcaaaagagcatatttccctaaacataaggggtcacttttgcca 51719358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 19078097 - 19078161
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  19078097 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 19078161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 19125987 - 19126051
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  19125987 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 19126051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 24196393 - 24196328
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||| ||||||||| ||||||||||||||||    
T  24196393 atatttcccttatgtt-aggaggtcaaaagagcatatttctctaaacatatggggtcacttttgcca 24196328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 3616931 - 3616866
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||  ||  ||||||| |||||||||||||||||||| | ||||||||||||||    
T  3616931 atatttcccttatgtgaagaggtcaaaagagcatatttccctaaacataggaggtcacttttgcca 3616866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 18606857 - 18606917
Alignment:
Q  3 tatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    ||||| |||||||||  || ||||||| ||||||||||||||||||| |||||||||||||    
T  18606857 tattttccttatgttatggggtcaaaagagcatatttccctaaacatgaggggtcactttt 18606917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 28920844 - 28920888
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||    
T  28920844 gtcaaaagagcatatttccctaaacatagggggtcacttttgcca 28920888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 4059694 - 4059759
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| ||||||||| ||||| |||||| ||||||||||||||||||||  |||||||||||||||    
T  4059694 atattttccttatgtt-aggaggtcaaaagagcatatttccctaaacatagagggtcacttttgcca 4059759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 48472035 - 48472100
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| |||||||| ||||| |||||| |||||||||||||||||||| ||||||| ||||||||    
T  48472035 atatttctcttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcaattttgcca 48472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 16551837 - 16551881
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||    
T  16551837 gtcaaaagagcatatttccctaaacattgggggtcacttttgcca 16551881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 2260551 - 2260611
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||| ||  || |||||||||||||||||| ||||||||  |||||||||||||    
T  2260551 atatttcccttatattatggggtcaaaaaagcatatttcactaaacat--ggggtcacttttg 2260611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 4455215 - 4455277
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||||||  || ||||||| ||||||||| |||||||||  ||| |||||||||    
T  4455215 atatttcccttatgttacggggtcaaaagagcatattttcctaaacattggggatcacttttg 4455277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 2425355 - 2425292
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||   | ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  2425355 atatttcccttatgttagagggtcaaaagagcatatt-ccctaaacata-ggggtcacttttgcca 2425292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 22786161 - 22786097
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| |||||||| ||  ||||||| |||||||||||||||||||  ||| ||||||||||||    
T  22786161 atatttcacttatgtt-agatgtcaaaagagcatatttccctaaacatgggggctcacttttgcca 22786097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 2657713 - 2657749
Alignment:
Q  31 agcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||||||| || |||||||||||||    
T  2657713 agcatatttccctaaacatagggagtcacttttgcca 2657749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 29676211 - 29676148
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    ||||||| |||||||| ||||| ||| || |||||||||||||||||||| ||| ||||||||||    
T  29676211 atatttcacttatgtt-aggagatcacaagagcatatttccctaaacataggggatcacttttgc 29676148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 31055486 - 31055551
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  31055486 atatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 31055551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 25557047 - 25557112
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  25557047 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 25557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 31648166 - 31648122
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31648166 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 31648122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 26639209 - 26639274
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  26639209 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgcca 26639274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 245726 - 245662
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  245726 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 245662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 16901169 - 16901233
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  16901169 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 16901233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 18695135 - 18695071
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  18695135 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 18695071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 38408760 - 38408696
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||  ||||||| |||||||||| ||||||||| ||||||||||||||||    
T  38408760 atatttcccttatgtt-agtggtcaaaagagcatatttctctaaacatagggggtcacttttgcca 38408696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 38476642 - 38476703
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    ||||||||||||||||  || ||||||| |||||||||||||||| ||| ||||||||||||    
T  38476642 atatttcccttatgttatggggtcaaaagagcatatttccctaaatatagggggtcactttt 38476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 10379413 - 10379351
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||||| | ||||||||||||    
T  10379413 atatttcccttatgtt-aggggtcaaaagagcatattttcctaaacataggaggtcacttttgc 10379351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 41663696 - 41663756
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||  |||||||||||||    
T  41663696 atatttcccttatgttatggggtcaaaagagcatatttccctaaacat--ggggtcacttttg 41663756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8645929 - 8645864
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||  ||||||| ||||||||    
T  8645929 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacattgggggtcaattttgcca 8645864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 10293259 - 10293324
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||| ||||||| ||||||| ||||||||    
T  10293259 atatttcccttatg-ttaggaggtcaaaagagcatatttcccaaaacatagggggtcatttttgcca 10293324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 16307670 - 16307712
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  16307670 gtcaaaagagcatatttccctaaacatagggggtcacttttgc 16307712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 23765562 - 23765622
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  23765562 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacat-aggggtcactttt 23765622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 23815410 - 23815470
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  23815410 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacat-aggggtcactttt 23815470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 36641275 - 36641210
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||| ||||||||| ||| ||||||||||||    
T  36641275 atatttcccttatgtt-aggaggtcaaaagagcatatttctctaaacataggggctcacttttgcca 36641210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 19169475 - 19169410
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||  ||||||  ||||||||| |||||||||| ||| ||||||||||||    
T  19169475 atatttcccttatgttaagaggtcaaatgagcatattttcctaaacataggggatcacttttgcca 19169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 17825670 - 17825731
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||| |||||||| ||| ||||||| ||||||||||||||||||| ||| ||||| ||||    
T  17825670 atatttctcttatgtt-aggggtcaaaagagcatatttccctaaacatgaggtgtcacatttg 17825731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 20653951 - 20653890
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||| |||||||| ||| ||||||| ||||||||||||||||||| |  |||||||||||    
T  20653951 atatttcacttatgtt-aggggtcaaaagagcatatttccctaaacatgaaaggtcacttttg 20653890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 15885336 - 15885401
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||  ||||||| || |||||||| ||||||||| ||| || ||||||||    
T  15885336 atatttcccttatgttaagaggtcaaaagagaatatttccataaacataaagggacatttttgcca 15885401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 34125191 - 34125130
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    |||||| |||||||||  ||  |||||| ||||||||||||||||||| | |||||||||||    
T  34125191 atattttccttatgttaggggatcaaaagagcatatttccctaaacatgaagggtcactttt 34125130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 38408651 - 38408622
Alignment:
Q  82 gggacgaaaagtggagtttagcctactttt 111  Q
    ||||||||||||||||||||||||||||||    
T  38408651 gggacgaaaagtggagtttagcctactttt 38408622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 1946 - 2011
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  1946 atatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtcacttttgcca 2011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 18749300 - 18749365
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||  ||||||| |||||||||||||||||||| ||||||||||||||||    
T  18749300 atatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 18749365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 18791489 - 18791424
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  18791489 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 18791424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 22968326 - 22968391
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  22968326 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 22968391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 23820067 - 23820002
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  23820067 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 23820002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 24603493 - 24603428
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  24603493 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 24603428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 34834057 - 34833992
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  34834057 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 34833992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 2058994 - 2059059
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| ||||||||||||||||||| | |||||||||||||||    
T  2058994 atatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcacttttgcca 2059059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 3118811 - 3118746
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| ||||||||||||||||||||  |||||||||||||||    
T  3118811 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagagggtcacttttgcca 3118746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24051141 - 24051075
Alignment:
Q  1 tatatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||| |||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  24051141 tatatttctcttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 24051075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 4597577 - 4597642
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||| ||||||||    
T  4597577 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcatttttgcca 4597642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 14572350 - 14572414
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  14572350 atatttcccttatg-ttaggatgtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 14572414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 15298617 - 15298552
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| ||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  15298617 atattttccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 15298552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 4371029 - 4370965
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||   |||||||||||||||    
T  4371029 atatttcccttatgtt-aggggtcaaaagagcatatttccctaaacatggagggtcacttttgcca 4370965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8412890 - 8412825
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||| ||||||||| |||||| |||||||||    
T  8412890 atatttcccttatgttagggggtcaaaagagcatatttctctaaacatagggggtcgcttttgcca 8412825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 22269538 - 22269475
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  22269538 atatttcccttatgttaagg-gtcaaaagaacatatttccctaaacat-aggggtcacttttgcca 22269475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 19282383 - 19282445
Alignment:
Q  2 atatttcccttatgtttaggagt-caaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    |||||||||||||||| |||||| ||||| ||||||||| | ||||||||||||||||||||||    
T  19282383 atatttcccttatgtt-aggagttcaaaatagcatatttacttaaacataaggggtcacttttg 19282445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 26240088 - 26240025
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    |||||||||||||||| ||| | |||||| ||||||||||| ||||||| ||||||||||||||    
T  26240088 atatttcccttatgttaagggggtcaaaagagcatatttccgtaaacatgaggggtcacttttg 26240025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 31210926 - 31210864
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    |||||||||||||||| ||||| |||||| ||||||||| |||||||||| |||||||||||||    
T  31210926 atatttcccttatgtt-aggaggtcaaaagagcatattttcctaaacatagggggtcacttttg 31210864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 26710479 - 26710544
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| ||||||||| ||||| |||||| |||||||||||||||||||| |||||| |||||||||    
T  26710479 atattttccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcgcttttgcca 26710544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 32451858 - 32451793
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| ||||||||||  |||||||| ||||||||||||||||    
T  32451858 atatttcccttatgtt-aggaggtcaaaagagcatatttctataaacatagggggtcacttttgcca 32451793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 32682450 - 32682512
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    |||||||| |||||||  |  ||||||| ||||||||||||||||||| |||||||||||||||    
T  32682450 atatttcctttatgttatgaggtcaaaagagcatatttccctaaacat-aggggtcacttttgc 32682512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 4013839 - 4013900
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||| ||  || ||||||| |||||||||||||||||||  |||||||||||||    
T  4013839 atatttcccttatattagggggtcaaaagagcatatttccctaaacat-gggggtcacttttg 4013900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 25819816 - 25819752
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| ||| || || ||||||||||||||||| ||||||||||||||||    
T  25819816 atatttcccttatgtt-aggaggtcagaagagtatatttccctaaacata-ggggtcacttttgcca 25819752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 35102663 - 35102716
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataagggg 55  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||    
T  35102663 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacataggggg 35102716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 12427363 - 12427298
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||| ||||||| | |  |||||| |||||||||||||||||||  ||| ||||||||||||    
T  12427363 atatttcctttatgttaatggttcaaaagagcatatttccctaaacatgggggatcacttttgcca 12427298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 23428791 - 23428856
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  23428791 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 23428856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 46673219 - 46673284
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  46673219 atatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgcca 46673284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 8339133 - 8339177
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8339133 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 8339177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 4522086 - 4522023
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    |||||||||||||||| ||  ||||||| |||||||||||||||||||| ||||||||||||||    
T  4522086 atatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcacttttgc 4522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 20001841 - 20001778
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||    
T  20001841 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgc 20001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8542742 - 8542677
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  8542742 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 8542677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 26628197 - 26628262
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  26628197 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 26628262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 27852923 - 27852988
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  27852923 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 27852988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 48907464 - 48907529
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  48907464 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 48907529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 25022835 - 25022900
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||| |||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  25022835 atatatcccttatgttatggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 25022900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 3781010 - 3780948
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||  ||||||||||||||||    
T  3781010 atatttcccttatgtt-aggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 3780948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 22447916 - 22447981
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  22447916 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgcca 22447981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 22500767 - 22500832
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||||||||| ||||||||||||||||    
T  22500767 atatttcccttatg-ttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgcca 22500832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 30155317 - 30155382
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||| ||||||||||||    
T  30155317 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacataggggatcacttttgcca 30155382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 13081026 - 13080961
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  |  ||||||| |||||||||||||||| ||| ||||||||||||||||    
T  13081026 atatttcccttatgttatgaggtcaaaagagcatatttccctaaatatagggggtcacttttgcca 13080961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 32960807 - 32960847
Alignment:
Q  27 aaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  32960807 aaaaagcatatttccctaaacatagggggtcacttttgcca 32960847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 3328985 - 3329046
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  3328985 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacttagggggtcactttt 3329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 10743539 - 10743478
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    |||||||||||||||| ||| || |||| |||||||||||||||||||| || ||||||||||    
T  10743539 atatttcccttatgtt-aggggttaaaagagcatatttccctaaacatagggagtcacttttg 10743478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 25179689 - 25179647
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  25179689 gtcaaaagagcatatttccctaaacatagggggtcacttttgc 25179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 48860834 - 48860773
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    |||||||||||||||| || || |||||| |||||||||||||||||||||||||||| ||||    
T  48860834 atatttcccttatgtt-agaaggtcaaaatagcatatttccctaaacataaggggtcattttt 48860773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 28173901 - 28173966
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| ||||||||||||||||||||  || ||| ||||||||    
T  28173901 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcatttttgcca 28173966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 28155054 - 28155107
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataagggg 55  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||    
T  28155054 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatatgggg 28155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 40836351 - 40836414
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||| ||  || ||||||| | |||||||||||||||||  ||||||||||||||||    
T  40836351 atatttcccttatattagggggtcaaaagaacatatttccctaaacat--ggggtcacttttgcca 40836414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 3821024 - 3820982
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||    
T  3821024 gtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 3820982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 4775982 - 4775918
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||| |||||   || ||||||| |||||||||||||||||||  ||||||||||||||||    
T  4775982 atatttcccgtatgtgagggggtcaaaatagcatatttccctaaacat-gggggtcacttttgcca 4775918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 4587993 - 4587928
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  4587993 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 4587928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 22191178 - 22191113
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  | |||||||| |||||||||||||||||||| ||||||||||||||||    
T  22191178 atatttcccttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcacttttgcca 22191113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 11176039 - 11175974
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  11176039 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 11175974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 18538000 - 18538065
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||| |||||  |  |||||||||||||||||||||||||||| ||||||||||||||||    
T  18538000 atatttccctaatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcacttttgcca 18538065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 25298973 - 25299038
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||| ||||||| ||  ||||||| |||||||||||||||||||| ||||||||||||||||    
T  25298973 atatttcctttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 25299038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 2986818 - 2986756
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| |||||||||||||    
T  2986818 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 2986756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 6763889 - 6763954
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| ||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  6763889 atattttccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 6763954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 9051199 - 9051264
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| || |||||||||||||    
T  9051199 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggagtcacttttgcca 9051264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 30714446 - 30714511
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||| ||||||| ||||||||||||||||    
T  30714446 atatttcccttatg-ttaggaggtcaaaagagcatatttcccgaaacatagggggtcacttttgcca 30714511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 38716325 - 38716260
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| |||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  38716325 atatttctcttatgtt-aggaggtcaaaagagcatatttccctaaacatatggggtcacttttgcca 38716260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 15700879 - 15700814
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||||||| |||||||||| |||||    
T  15700879 atatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgcca 15700814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 15735196 - 15735131
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  |  ||||||| |||||||||||| ||||||| ||||||||||||||||    
T  15735196 atatttcccttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcacttttgcca 15735131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36464405 - 36464341
Alignment:
Q  1 tatatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||||  || ||||||| | |||||||||||||||||  ||||||||||||||||    
T  36464405 tatatttcccttatgttagggggtcaaaagatcatatttccctaaacat--ggggtcacttttgcca 36464341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 9787691 - 9787626
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| || || |||||| ||||||||||||||||||||  |||||||||||||||    
T  9787691 atatttcccttatgtt-agcaggtcaaaagagcatatttccctaaacatagtgggtcacttttgcca 9787626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 43301786 - 43301725
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    |||||||||||| ||| ||| ||||||| | |||| ||||||||||||| |||||||||||||    
T  43301786 atatttcccttaagtt-aggggtcaaaagaacatacttccctaaacatatggggtcacttttg 43301725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 5821 - 5886
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  5821 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 5886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 61946 - 61881
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  61946 atatttcccttatgtt-aggatgtcaaaagagcatatttccctaaacatagggggtcacttttgcca 61881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 19414 - 19351
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  19414 atatttcccttatgtt-aggggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 19351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 4519039 - 4519104
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  4519039 atatttcccttatgtt-aggagatcaaaagagcatatttccctaaacatagggggtcacttttgcca 4519104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 17648375 - 17648310
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  17648375 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 17648310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 19391559 - 19391624
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  19391559 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 19391624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 30784436 - 30784501
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  30784436 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatacggggtcacttttgcca 30784501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 5192443 - 5192508
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||  ||||||| |||||||||||||||||||| | ||||||||||||||    
T  5192443 atatttcccttatgttaagaggtcaaaagagcatatttccctaaacataggaggtcacttttgcca 5192508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 21929975 - 21930039
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  21929975 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 21930039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 44147103 - 44147039
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  44147103 atatttcccttatgtt-aggaggtcaaaatagcatatttccctaaacat-aggggtcacttttgcca 44147039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 8802572 - 8802636
Alignment:
Q  3 tatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||||||  |||||||||||||||    
T  8802572 tatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgcca 8802636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 21666446 - 21666511
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||| | |||||||||||||||||||  ||||||||||||||||    
T  21666446 atatttcccttatgttagggggtcaagagagcatatttccctaaacatggggggtcacttttgcca 21666511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 32400494 - 32400559
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || |||||||  ||||||||| ||||||||| ||||||||||||||||    
T  32400494 atatttcccttatgttagggggtcaaaagcgcatatttcactaaacatagggggtcacttttgcca 32400559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 33895506 - 33895443
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||| ||||||||||    
T  33895506 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacataggggatcacttttgc 33895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 1824736 - 1824674
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| ||||||||| ||| ||||||| |||||||||||||||||||  ||||||||||||||||    
T  1824736 atattttccttatgtt-aggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 1824674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 1859181 - 1859119
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| ||||||||| ||| ||||||| |||||||||||||||||||  ||||||||||||||||    
T  1859181 atattttccttatgtt-aggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 1859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 12723433 - 12723498
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||| ||||||||| ||||||| ||||||||    
T  12723433 atatttcccttatg-ttaggaggtcaaaagagcatatttctctaaacatagggggtcatttttgcca 12723498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 19924397 - 19924332
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| ||| || || ||||||||||||||||| ||||||||||||||||    
T  19924397 atatttcccttatgtt-aggaggtcagaagagtatatttccctaaacatagggggtcacttttgcca 19924332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 38630187 - 38630126
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| || |||||||||    
T  38630187 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggagtcactttt 38630126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 22452345 - 22452409
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcc 66  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||| ||| | |||||||||||||    
T  22452345 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaatatatgaggtcacttttgcc 22452409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 3208111 - 3208050
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    |||||||||||||||| ||| ||||||| | ||||||||||||||||||  || |||||||||    
T  3208111 atatttcccttatgtt-aggggtcaaaagaacatatttccctaaacatagaggttcacttttg 3208050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 18253059 - 18253117
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    ||||||||||||||||  || ||||||||| |||||||||||||||||  ||||||||||||    
T  18253059 atatttcccttatgttatgg-gtcaaaaaaacatatttccctaaacat--ggggtcactttt 18253117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 4807772 - 4807836
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacata-aggggtcacttttgc 65  Q
    |||||||||||||| |||||| ||||||| | ||||||||| |||||||| |||||||||||||||    
T  4807772 atatttcccttatg-ttaggaggtcaaaagaacatatttccttaaacatagaggggtcacttttgc 4807836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 23565228 - 23565188
Alignment:
Q  27 aaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||| |||||||| ||| ||||||||||||    
T  23565228 aaaaagcatatttccataaacataggggatcacttttgcca 23565188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 2331145 - 2331080
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  2331145 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 2331080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 20636751 - 20636686
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  20636751 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 20636686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 20638623 - 20638558
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  20638623 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 20638558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 27869367 - 27869432
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  27869367 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 27869432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 35337694 - 35337759
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  35337694 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 35337759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 42271464 - 42271399
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  42271464 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 42271399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 21224524 - 21224588
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcc 66  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  21224524 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc 21224588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 3562605 - 3562669
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  3562605 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 3562669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 19195385 - 19195450
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||| |||||||||||||||| ||||||||||||||||    
T  19195385 atatttcccttatg-ttaggaggtcaaaagagcgtatttccctaaacatagggggtcacttttgcca 19195450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 24597687 - 24597752
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||| ||||||||||    
T  24597687 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggttacttttgcca 24597752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 41452421 - 41452486
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| ||| || || ||||||||||||||||||||||||||||||||||    
T  41452421 atatttcccttatgtt-aggaggtcagaagagtatatttccctaaacataaggggtcacttttgcca 41452486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 11843350 - 11843414
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| ||||||||| ||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  11843350 atattttccttatgtt-aggggtcaaaagagcatatttccctaaacataggaggtcacttttgcca 11843414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 13577958 - 13578021
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||| ||||||| ||||||||||| ||||||| |||||||||||||||||    
T  13577958 atatttcccttatgtt-aggggtcaaaagagcatatttccttaaacat-aggggtcacttttgcca 13578021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 18754438 - 18754503
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| ||||||||||||||||||||  || ||||||||||||    
T  18754438 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcacttttgcca 18754503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 21225720 - 21225784
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  21225720 atatttcccttatgtt-aggggtcaaaagagcatatttccctaaacatagagggtcgcttttgcca 21225784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 26385392 - 26385328
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| |||||||| ||| ||||||| ||||||||||||||||||| | |||||||||||||||    
T  26385392 atatttctcttatgtt-aggggtcaaaatagcatatttccctaaacatgatgggtcacttttgcca 26385328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 48176135 - 48176199
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||| || || ||||||||||    
T  48176135 atatttcccttatgtt-aggggtcaaaagagcatatttccctaaacatagggagttacttttgcca 48176199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 26126385 - 26126339
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacat 49  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  26126385 atatttcccttatgtt-aggggtcaaaaaagcatatttccctaaacat 26126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 3403224 - 3403286
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||||||  || ||||||| ||||||||| |||| |||| ||||||||||||||    
T  3403224 atatttcccttatgttagggggtcaaaagagcatattttcctatacatgaggggtcacttttg 3403286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 17305896 - 17305832
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||| ||||||||| |||||||||||||||||    
T  17305896 atatttcccttatg-ttaggaggtcaaaagagcatattttcctaaacat-aggggtcacttttgcca 17305832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 31494042 - 31493978
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| |||||||||   | ||||||| ||||||||||||||||||| |||||||||||||||||    
T  31494042 atattttccttatgttagagggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 31493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 4571516 - 4571579
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || || |||| |||||||||||||||||||   |||||||||||||||    
T  4571516 atatttcccttatgttatggggtaaaaagagcatatttccctaaacat--tgggtcacttttgcca 4571579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8526928 - 8526863
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||  ||||||||| |||||||||| ||||||| ||||||||    
T  8526928 atatttcccttatg-ttaggaggtcaaatgagcatattttcctaaacatagggggtcatttttgcca 8526863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 15681725 - 15681667
Alignment:
Q  6 ttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||  || ||||||| ||||||||||||||||||| ||| ||||| ||||    
T  15681725 ttcccttatgttagggggtcaaaagagcatatttccctaaacatgaggtgtcacatttg 15681667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 36746675 - 36746739
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcc 66  Q
    ||||||| |||||||| ||||| |||||| ||||||||||||||||||||  |||| |||||||||    
T  36746675 atatttctcttatgtt-aggaggtcaaaagagcatatttccctaaacatagtgggttacttttgcc 36746739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 24448216 - 24448256
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccc 42  Q
    ||||||||||||||||  || ||||||||||||||||||||    
T  24448216 atatttcccttatgttagggggtcaaaaaagcatatttccc 24448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 24464707 - 24464646
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgc 65  Q
    ||||||||||||||||  || ||||||| | |||||||||||||||||  ||||||||| ||||    
T  24464707 atatttcccttatgttagggggtcaaaagaacatatttccctaaacat--ggggtcactcttgc 24464646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 13397847 - 13397912
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  13397847 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 13397912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 15058990 - 15059055
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  15058990 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 15059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 41877198 - 41877263
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  41877198 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 41877263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 43793803 - 43793868
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  43793803 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgcca 43793868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 19232516 - 19232581
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| |||||||||  |||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  19232516 atattttccttatgttagggagtcaaaagagcatatttccctaaacatatgggatcacttttgcca 19232581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 4433355 - 4433419
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcc 66  Q
    |||||| |||||||||  || ||||||| |||||||||||||||||||| |||||||||||||||    
T  4433355 atattttccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcc 4433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 25011861 - 25011802
Alignment:
Q  8 cccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||||||    
T  25011861 cccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 25011802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 4098788 - 4098726
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||||||| |||||||||||||    
T  4098788 atatttcccttatgttagggggtcaaaagagcatatttcccaaaacatagggggtcacttttg 4098726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 9195836 - 9195897
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| |||||||||||||    
T  9195836 atatttcccttatgttatgg-gtcaaaagagcatatttccctaaacatagggggtcacttttg 9195897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 55780504 - 55780454
Alignment:
Q  17 ttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  55780504 ttaggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 55780454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 55844684 - 55844634
Alignment:
Q  17 ttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  55844684 ttaggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 55844634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 1588585 - 1588645
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||| | ||||||||||    
T  1588585 atatttcccttatgtt-aggggtcaaaagagcatatttccctaaacataggaggtcactttt 1588645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 35475421 - 35475358
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||||  |||||||||||||||    
T  35475421 atatttcccttatgtt-aggaggtcaaaagagcatatttccctaaacata--gggtcacttttgcca 35475358  T

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Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 5304519 - 5304583
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||| ||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  5304519 atattttccttatgtt-aggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 5304583  T

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Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 13826591 - 13826655
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||| |||||| |||||||||||||||||    
T  13826591 atatttcccttatg-ttaggaggtcaaaagagcatatttcccgaaacat-aggggtcacttttgcca 13826655  T

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Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 2931453 - 2931392
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    |||||||| |||||||  |  ||||||| |||||||||||||||||||| ||||||||||||    
T  2931453 atatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactttt 2931392  T

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Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 27018346 - 27018282
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||| ||||  || ||||||| ||||||||||||||||||| | |||||||||||||||    
T  27018346 atatttcccttttgttagggggtcaaaagagcatatttccctaaacat-atgggtcacttttgcca 27018282  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 6789159 - 6789195
Alignment:
Q  31 agcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||||||| ||||||||||||||||    
T  6789159 agcatatttccctaaacatagggggtcacttttgcca 6789195  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 25618789 - 25618833
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| ||||||||||||||||| || ||||||||||||||||    
T  25618789 gtcaaaagagcatatttccctaaacttagggggtcacttttgcca 25618833  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 6209417 - 6209475
Alignment:
Q  5 tttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||||||||| ||| |||||||| ||||| ||||||||||||  |||||||||||||    
T  6209417 tttcccttatgtt-aggggtcaaaaatgcataattccctaaacatgtggggtcacttttg 6209475  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 4357384 - 4357319
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| || || |||||| |||||||||||||||| ||| || |||||||||||||    
T  4357384 atatttcccttatgtt-agaaggtcaaaagagcatatttccctaaatatagggtgtcacttttgcca 4357319  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 41034768 - 41034703
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||| ||||| |||||| | ||||||||||| | |||| ||||||||||||||||    
T  41034768 atatttcccttatgtt-aggaggtcaaaagatcatatttccctgagcatagggggtcacttttgcca 41034703  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 24626393 - 24626438
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaac 47  Q
    ||||||||||||||||   ||||||||| |||||||||||||||||    
T  24626393 atatttcccttatgttattgagtcaaaagagcatatttccctaaac 24626438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 45633540 - 45633504
Alignment:
Q  31 agcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||||||||| || |||||||||||||    
T  45633540 agcatatttccctaaacatagggagtcacttttgcca 45633504  T

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Target: scaffold0087 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 25136 - 25197
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcactttt 63  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||| ||||||||||||    
T  25136 atatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 25197  T

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Target: scaffold0607 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 2221 - 2286
Alignment:
Q  2 atatttcccttatgtttaggag-tcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||| |||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  2221 atattgcccttatgtt-aggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 2286  T

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Target: scaffold0419 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 3132 - 3197
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  3132 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgcca 3197  T

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Target: scaffold0267 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 3740 - 3803
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||||||||||  ||||||||||||||||    
T  3740 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 3803  T

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Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 142119 - 142183
Alignment:
Q  2 atatttcccttatgtttagga-gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  142119 atatttcccttatg-ttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttgcca 142183  T

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Target: scaffold0062 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 49791 - 49726
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||||||| |||||||||| |||||    
T  49791 atatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgcca 49726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 62330 - 62265
Alignment:
Q  2 atatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||||||| |||||||||| |||||    
T  62330 atatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgcca 62265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 5400 - 5356
Alignment:
Q  23 gtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 67  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||    
T  5400 gtcaaaagagcatatttttctaaacataaggggtcacttttgcca 5356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 455061 - 455000
Alignment:
Q  3 tatttcccttatgtttaggagtcaaaaaagcatatttccctaaacataaggggtcacttttg 64  Q
    ||||||| |||||||  || || |||| |||||||||||||||||||  |||||||||||||    
T  455061 tatttcctttatgttagggggttaaaagagcatatttccctaaacatggggggtcacttttg 455000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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