View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2335_low_11 (Length: 398)

Name: NF2335_low_11
Description: NF2335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2335_low_11
NF2335_low_11
[»] chr4 (44 HSPs)
chr4 (18-340)||(32778100-32778426)
chr4 (42-102)||(28798457-28798517)
chr4 (42-158)||(19119143-19119256)
chr4 (43-102)||(45874055-45874114)
chr4 (44-118)||(40292668-40292742)
chr4 (42-102)||(12867840-12867900)
chr4 (46-102)||(22607988-22608044)
chr4 (42-102)||(53457823-53457883)
chr4 (40-158)||(18257326-18257456)
chr4 (43-99)||(19849575-19849631)
chr4 (42-158)||(1173950-1174078)
chr4 (99-158)||(12735499-12735558)
chr4 (43-102)||(22910326-22910385)
chr4 (43-102)||(22968137-22968196)
chr4 (43-102)||(23710402-23710461)
chr4 (43-102)||(34739280-34739339)
chr4 (52-95)||(37395633-37395676)
chr4 (43-102)||(54768501-54768560)
chr4 (43-102)||(55214652-55214711)
chr4 (40-102)||(11277979-11278041)
chr4 (28-121)||(31751859-31751952)
chr4 (106-158)||(26424859-26424911)
chr4 (106-158)||(34739355-34739407)
chr4 (106-158)||(43139907-43139959)
chr4 (106-158)||(45874130-45874182)
chr4 (106-158)||(53457899-53457951)
chr4 (43-102)||(2864817-2864876)
chr4 (116-158)||(23417484-23417524)
chr4 (51-102)||(23417552-23417603)
chr4 (43-102)||(26424927-26424985)
chr4 (43-86)||(32441169-32441212)
chr4 (43-102)||(43139975-43140034)
chr4 (108-158)||(12867918-12867968)
chr4 (104-158)||(55400301-55400355)
chr4 (106-158)||(238459-238511)
chr4 (42-86)||(238543-238587)
chr4 (46-102)||(2804525-2804581)
chr4 (42-86)||(12735430-12735474)
chr4 (106-158)||(28798389-28798441)
chr4 (43-91)||(37134048-37134096)
chr4 (44-100)||(41679375-41679431)
chr4 (43-99)||(51287601-51287657)
chr4 (106-158)||(54768433-54768485)
chr4 (106-158)||(55214727-55214779)
[»] chr6 (13 HSPs)
chr6 (43-158)||(35218641-35218756)
chr6 (43-102)||(24619148-24619207)
chr6 (43-95)||(4464127-4464179)
chr6 (99-158)||(16518491-16518548)
chr6 (42-158)||(28592129-28592245)
chr6 (42-102)||(33621493-33621553)
chr6 (43-102)||(33704216-33704275)
chr6 (59-99)||(5598847-5598887)
chr6 (43-101)||(21000692-21000750)
chr6 (43-104)||(7487331-7487392)
chr6 (106-158)||(21037365-21037417)
chr6 (43-95)||(28322932-28322984)
chr6 (106-158)||(33704291-33704343)
[»] chr2 (38 HSPs)
chr2 (43-158)||(42578180-42578295)
chr2 (42-158)||(34460368-34460496)
chr2 (42-102)||(11459714-11459774)
chr2 (41-101)||(11816621-11816681)
chr2 (42-158)||(19537306-19537434)
chr2 (40-102)||(10639675-10639737)
chr2 (41-102)||(39535603-39535664)
chr2 (43-102)||(26605624-26605683)
chr2 (43-102)||(33083623-33083682)
chr2 (43-102)||(40786278-40786337)
chr2 (43-101)||(23839859-23839917)
chr2 (104-158)||(45125166-45125220)
chr2 (40-97)||(6055079-6055136)
chr2 (59-104)||(8311345-8311390)
chr2 (106-158)||(10639607-10639659)
chr2 (42-102)||(11708677-11708737)
chr2 (42-102)||(19816219-19816279)
chr2 (106-158)||(23839934-23839986)
chr2 (106-158)||(29659219-29659271)
chr2 (106-158)||(33083555-33083607)
chr2 (43-91)||(34234530-34234578)
chr2 (106-158)||(37197611-37197663)
chr2 (46-102)||(38440266-38440322)
chr2 (43-102)||(15782590-15782649)
chr2 (46-105)||(34093240-34093299)
chr2 (41-98)||(7275959-7276017)
chr2 (47-101)||(25501853-25501907)
chr2 (47-101)||(42025674-42025728)
chr2 (42-100)||(45125236-45125294)
chr2 (43-88)||(9815879-9815924)
chr2 (99-156)||(11708746-11708803)
chr2 (106-158)||(21312280-21312330)
chr2 (41-86)||(29659303-29659348)
chr2 (116-156)||(43684156-43684194)
chr2 (42-82)||(13106355-13106395)
chr2 (43-95)||(19048754-19048806)
chr2 (106-158)||(26605699-26605751)
chr2 (43-99)||(45201944-45202000)
[»] chr5 (28 HSPs)
chr5 (43-158)||(32143415-32143530)
chr5 (41-101)||(11124650-11124710)
chr5 (43-158)||(17465091-17465204)
chr5 (43-102)||(13203957-13204016)
chr5 (42-101)||(40177623-40177682)
chr5 (40-102)||(27721428-27721490)
chr5 (42-99)||(1191612-1191669)
chr5 (42-102)||(2970983-2971043)
chr5 (41-97)||(3386974-3387030)
chr5 (44-104)||(4825006-4825066)
chr5 (42-94)||(35317774-35317826)
chr5 (43-102)||(21018223-21018282)
chr5 (52-102)||(3049123-3049173)
chr5 (43-101)||(21112049-21112107)
chr5 (44-81)||(9722164-9722201)
chr5 (106-158)||(13204032-13204084)
chr5 (106-158)||(21018298-21018350)
chr5 (106-158)||(29265950-29266002)
chr5 (106-158)||(31909386-31909438)
chr5 (106-158)||(35317698-35317750)
chr5 (116-158)||(12257443-12257483)
chr5 (116-158)||(23262631-23262671)
chr5 (47-101)||(8734000-8734054)
chr5 (43-99)||(2786271-2786327)
chr5 (106-158)||(2971059-2971111)
chr5 (106-158)||(4824940-4824992)
chr5 (46-102)||(6020995-6021051)
chr5 (44-100)||(17984813-17984869)
[»] chr7 (43 HSPs)
chr7 (43-149)||(34763454-34763560)
chr7 (46-102)||(8439081-8439137)
chr7 (42-103)||(25503999-25504060)
chr7 (42-102)||(44083939-44083999)
chr7 (42-101)||(28111001-28111060)
chr7 (44-94)||(23036280-23036330)
chr7 (47-101)||(43753824-43753878)
chr7 (106-158)||(7162791-7162841)
chr7 (38-94)||(11355818-11355874)
chr7 (49-101)||(27229548-27229600)
chr7 (43-99)||(29255717-29255773)
chr7 (42-101)||(25112317-25112376)
chr7 (42-97)||(27737944-27737999)
chr7 (43-102)||(40058238-40058297)
chr7 (41-104)||(43171006-43171069)
chr7 (42-104)||(32606397-32606459)
chr7 (44-102)||(47250320-47250378)
chr7 (42-95)||(3838607-3838660)
chr7 (106-158)||(42081620-42081670)
chr7 (43-100)||(46427360-46427417)
chr7 (42-102)||(2146635-2146695)
chr7 (106-158)||(4106813-4106865)
chr7 (106-158)||(4107384-4107436)
chr7 (42-102)||(23358184-23358244)
chr7 (106-158)||(23358260-23358312)
chr7 (42-102)||(25546344-25546404)
chr7 (41-101)||(27915651-27915711)
chr7 (106-158)||(31770533-31770585)
chr7 (42-102)||(31770601-31770661)
chr7 (106-158)||(38781209-38781261)
chr7 (106-158)||(40058313-40058365)
chr7 (43-102)||(4106738-4106797)
chr7 (116-158)||(19630669-19630709)
chr7 (116-158)||(47250252-47250292)
chr7 (116-158)||(47570719-47570759)
chr7 (43-105)||(7298191-7298253)
chr7 (44-94)||(42081693-42081743)
chr7 (106-156)||(44084015-44084065)
chr7 (106-158)||(2146711-2146763)
chr7 (106-158)||(8439153-8439205)
chr7 (43-91)||(18506355-18506403)
chr7 (106-158)||(25112248-25112300)
chr7 (106-158)||(41183890-41183942)
[»] chr1 (33 HSPs)
chr1 (41-102)||(45813080-45813141)
chr1 (42-102)||(41761480-41761540)
chr1 (43-158)||(192415-192542)
chr1 (44-102)||(5943682-5943740)
chr1 (43-158)||(41808202-41808329)
chr1 (43-102)||(28455874-28455933)
chr1 (46-101)||(29587255-29587310)
chr1 (43-102)||(32007074-32007133)
chr1 (43-158)||(13109770-13109897)
chr1 (38-100)||(34305708-34305770)
chr1 (59-101)||(47111473-47111515)
chr1 (65-102)||(7059489-7059526)
chr1 (42-99)||(39284289-39284346)
chr1 (106-158)||(5055789-5055841)
chr1 (43-102)||(26032798-26032860)
chr1 (106-158)||(28455949-28456001)
chr1 (106-158)||(32007149-32007201)
chr1 (106-158)||(41039304-41039356)
chr1 (106-158)||(45813012-45813064)
chr1 (42-94)||(48660021-48660073)
chr1 (43-102)||(5055857-5055916)
chr1 (43-102)||(11688263-11688322)
chr1 (99-158)||(35945865-35945924)
chr1 (116-158)||(48660109-48660149)
chr1 (43-100)||(2088976-2089033)
chr1 (43-100)||(3688307-3688364)
chr1 (41-86)||(46447462-46447507)
chr1 (106-158)||(20823-20875)
chr1 (43-95)||(29994459-29994511)
chr1 (59-99)||(39111950-39111990)
chr1 (50-102)||(39276357-39276409)
chr1 (106-158)||(39276425-39276477)
chr1 (106-158)||(41761412-41761464)
[»] chr3 (35 HSPs)
chr3 (42-102)||(55018103-55018163)
chr3 (41-158)||(28844502-28844632)
chr3 (43-101)||(43247720-43247778)
chr3 (47-101)||(47770329-47770383)
chr3 (42-102)||(7824523-7824583)
chr3 (42-102)||(29689551-29689611)
chr3 (43-95)||(42392881-42392933)
chr3 (43-102)||(1778851-1778910)
chr3 (43-102)||(4601425-4601484)
chr3 (43-102)||(54151750-54151809)
chr3 (43-101)||(51665995-51666053)
chr3 (43-158)||(54158266-54158393)
chr3 (42-99)||(28458662-28458719)
chr3 (43-104)||(41377584-41377645)
chr3 (59-99)||(448947-448987)
chr3 (106-158)||(7824455-7824507)
chr3 (106-158)||(29689483-29689535)
chr3 (43-99)||(35461551-35461607)
chr3 (106-158)||(43247651-43247703)
chr3 (43-99)||(50729524-50729580)
chr3 (43-99)||(50783269-50783325)
chr3 (43-95)||(52500838-52500890)
chr3 (106-158)||(54151682-54151734)
chr3 (116-158)||(3112996-3113036)
chr3 (56-99)||(9349748-9349791)
chr3 (116-158)||(51665926-51665966)
chr3 (116-158)||(55320401-55320441)
chr3 (104-158)||(4601498-4601552)
chr3 (43-81)||(7958569-7958607)
chr3 (106-156)||(9349679-9349729)
chr3 (43-93)||(40756806-40756856)
chr3 (44-94)||(51054702-51054752)
chr3 (105-158)||(52500912-52500965)
chr3 (54-102)||(8137700-8137748)
chr3 (106-158)||(36228995-36229047)
[»] chr8 (44 HSPs)
chr8 (106-158)||(10963243-10963293)
chr8 (42-102)||(6099571-6099631)
chr8 (43-95)||(39435282-39435334)
chr8 (43-102)||(70592-70651)
chr8 (43-158)||(12534721-12534846)
chr8 (40-99)||(22979601-22979660)
chr8 (43-102)||(35779566-35779625)
chr8 (41-102)||(42192708-42192769)
chr8 (42-102)||(1409-1469)
chr8 (42-102)||(3822395-3822455)
chr8 (47-99)||(18752345-18752397)
chr8 (42-102)||(28817255-28817315)
chr8 (42-102)||(29425356-29425416)
chr8 (42-102)||(32333113-32333173)
chr8 (43-99)||(41753052-41753108)
chr8 (43-102)||(6602587-6602646)
chr8 (43-102)||(6678040-6678099)
chr8 (43-102)||(40911221-40911280)
chr8 (58-100)||(7403765-7403807)
chr8 (41-99)||(41849303-41849361)
chr8 (106-158)||(1341-1393)
chr8 (106-158)||(70524-70576)
chr8 (106-158)||(1078649-1078701)
chr8 (106-158)||(6602519-6602571)
chr8 (106-158)||(6677972-6678024)
chr8 (116-159)||(9292105-9292146)
chr8 (43-159)||(20269542-20269658)
chr8 (43-159)||(21056171-21056287)
chr8 (106-158)||(32333189-32333241)
chr8 (106-158)||(35779498-35779550)
chr8 (43-102)||(9292018-9292077)
chr8 (116-158)||(42885261-42885301)
chr8 (106-156)||(7813397-7813447)
chr8 (42-100)||(18386707-18386765)
chr8 (108-158)||(28817333-28817383)
chr8 (42-100)||(39303308-39303366)
chr8 (108-158)||(42192640-42192690)
chr8 (43-104)||(1078715-1078776)
chr8 (41-102)||(4531051-4531112)
chr8 (43-100)||(7792661-7792718)
chr8 (42-87)||(31695353-31695398)
chr8 (106-158)||(2907090-2907141)
chr8 (106-158)||(13891165-13891217)
chr8 (40-100)||(45264711-45264770)
[»] scaffold0032 (2 HSPs)
scaffold0032 (43-102)||(56481-56540)
scaffold0032 (106-158)||(56556-56608)
[»] scaffold1348 (2 HSPs)
scaffold1348 (43-102)||(931-990)
scaffold1348 (106-158)||(863-915)
[»] scaffold0044 (2 HSPs)
scaffold0044 (43-102)||(10042-10101)
scaffold0044 (116-158)||(9974-10014)
[»] scaffold0067 (1 HSPs)
scaffold0067 (47-100)||(34822-34875)
[»] scaffold0360 (1 HSPs)
scaffold0360 (43-99)||(14495-14551)
[»] scaffold0119 (4 HSPs)
scaffold0119 (106-158)||(13952-14004)
scaffold0119 (106-158)||(19632-19684)
scaffold0119 (43-99)||(14023-14079)
scaffold0119 (43-99)||(19703-19759)
[»] scaffold0053 (2 HSPs)
scaffold0053 (54-102)||(22174-22222)
scaffold0053 (106-158)||(22238-22290)
[»] scaffold0038 (1 HSPs)
scaffold0038 (43-95)||(114252-114304)


Alignment Details
Target: chr4 (Bit Score: 178; Significance: 7e-96; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 18 - 340
Target Start/End: Original strand, 32778100 - 32778426
Alignment:
Q  18 atgaatagtaaaaaagtatcataatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccaga------------ 105  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||||||||||  |||||||||||||||||||||||||| || |                 
T  32778100 atgaatagtaaaaaagtatcataatgtctagaaatcatagatcaactgacaaataccaaaattgcaaggtcggacgtcgtgatccgggttcgaacacgag 32778199  T
Q  106 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaagaatnnnnnnncaatatcataataaatgactaactatatatgtaaccat 205  Q
    |||||||| ||||||||||||||||| |  ||||||||||| || | |  | ||         |||||||||||||||||||||||||||||||||||||    
T  32778200 acctcacaattgtgtgagtttattttta--gtggattaccatttaagcccaaaaaaaa-----aatatcataataaatgactaactatatatgtaaccat 32778292  T
Q  206 taaagaacactaaatgagttttaagcagaagatctaaaacctgaatctctgaaaattagttttaagcagaagatctaaacgagtttactaaattataata 305  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32778293 taaagaacactaaatgagttttaagcagaagatctaaaacctga-tctctgaaaattagttttaagcagaagatctaaacgagtttactaaattataata 32778391  T
Q  306 tttgtttatttgtcttttaaaaaattgttatgtca 340  Q
    |||||||||||||||||||||||||||||||||||    
T  32778392 tttgtttatttgtcttttaaaaaattgttatgtca 32778426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 28798517 - 28798457
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||||||||||| |||||| | ||||||||||| |||||||||||||||    
T  28798517 tgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgaccc 28798457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 19119143 - 19119256
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt-tgtgtgagtttattttcacagtgga 140  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||| |||||||| ||| ||   |||||||||| |||||||||||| |||  ||||||     
T  19119143 tgtctagaagtcttagttcaactgataaatgtcaaaattacaaggccggacgtcatgatcc--gacctcacagtgtgtgtgagtttaattt--cagtggt 19119238  T
Q  141 ttaccacttcatctaaga 158  Q
    |||| ||| |||||||||    
T  19119239 ttactactccatctaaga 19119256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 45874055 - 45874114
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||    
T  45874055 gtctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgaccc 45874114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 40292742 - 40292668
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttgt 118  Q
    ||||||||| |||  |||||||| |||||||||||||| ||||||||||||||| ||| ||||||||| ||||||    
T  40292742 tctagaagttctaactcaactgataaatgtcaaaattgtaaggtcggacgtcgtaacctagaacctcatagttgt 40292668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 12867840 - 12867900
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||| |||| ||||||| |||||| | |||||||||||||||||||||||||||    
T  12867840 tgtctagaagttctagctcaactgtcaaatgccgaaattgcaaggtcggacgtcgtgaccc 12867900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 22607988 - 22608044
Alignment:
Q  46 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||| |||||||||| ||||| ||||||||||| |||||||||||||||    
T  22607988 tagaagtcctagctcaactgacagatgtcgaaattgcaaggccggacgtcgtgaccc 22608044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 53457823 - 53457883
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||||||||||| ||||||    
T  53457823 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgaccc 53457883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 18257326 - 18257456
Alignment:
Q  40 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga------------cccagaacctcacagttgt--gtgagtt 125  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| |||            ||| | |||||||||||||  |||||||    
T  18257326 aatgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagtt 18257425  T
Q  126 tattttcacagtggattaccacttcatctaaga 158  Q
    ||||||  |||||||||||||||||||||||||    
T  18257426 tatttt--cagtggattaccacttcatctaaga 18257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 19849631 - 19849575
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||    
T  19849631 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtga 19849575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 1173950 - 1174078
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc------------cagaacctcacagttgtgtg--agttta 127  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| |||||            | | ||||||||||||||||  ||||||    
T  1173950 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagttta 1174049  T
Q  128 ttttcacagtggattaccacttcatctaaga 158  Q
    ||||||  |||||||||||||||||||||||    
T  1174050 ttttca--gtggattaccacttcatctaaga 1174078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 12735499 - 12735558
Alignment:
Q  99 acccagaacctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||| ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  12735499 acccaggacctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 12735558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 22910385 - 22910326
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||   | |||||||||||| ||| |||||||||||||||||||||||||||    
T  22910385 gtctagaagtctccgctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgaccc 22910326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 22968137 - 22968196
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||   | |||||||||||| ||| |||||||||||||||||||||||||||    
T  22968137 gtctagaagtctccgctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgaccc 22968196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 23710461 - 23710402
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||| ||| |||||||  ||||||| ||||||||||| |||||||||||||||    
T  23710461 gtctagaagtcatagctcaactggtaaatgtcgaaattgcaaggccggacgtcgtgaccc 23710402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 34739280 - 34739339
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  34739280 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 34739339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 37395633 - 37395676
Alignment:
Q  52 tcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  37395633 tcctagttcaacggacaaatttcaaaattgcaaggtcggacgtc 37395676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 54768560 - 54768501
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  54768560 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 54768501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 55214652 - 55214711
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||| ||  ||||||| |||||| ||||||||||||| |||||||||||||||    
T  55214652 gtctagaagtcttaactcaactgtcaaatgccaaaattgcaaggccggacgtcgtgaccc 55214711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 11277979 - 11278041
Alignment:
Q  40 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||||| ||||| || ||||||    
T  11277979 aatgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgaccc 11278041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 31751952 - 31751859
Alignment:
Q  28 aaaaagtatcataatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttgtgtg 121  Q
    |||||| | |||| ||| |||||||| |||||||||||| |||||   ||||| |||||  ||||||| ||| |||| ||||||||||||||||    
T  31751952 aaaaagaagcatattgtttagaagtcatagttcaactgataaatgctgaaattacaaggctggacgtcttgatccaggacctcacagttgtgtg 31751859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 26424911 - 26424859
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  26424911 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 26424859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 34739355 - 34739407
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  34739355 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 34739407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 43139959 - 43139907
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  43139959 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 43139907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 45874130 - 45874182
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  45874130 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 45874182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 53457899 - 53457951
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  53457899 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 53457951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 2864876 - 2864817
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||  ||||||| |||||| | |||||||||||  ||||||||||||||    
T  2864876 gtctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgaccc 2864817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 23417524 - 23417484
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  23417524 tgtgtgagtttattttca--gtggattaccacttcatctaaga 23417484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 23417603 - 23417552
Alignment:
Q  51 gtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  23417603 gtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 23417552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 26424985 - 26424927
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  26424985 gtctagaagtcctagctcaactggcaaatgccgaaattgcaagg-cggacgtcatgaccc 26424927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 32441212 - 32441169
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 86  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||    
T  32441212 gtctagaagtcctagctcaactggcaaatgtcgaaattgcaagg 32441169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 43140034 - 43139975
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||| |||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  43140034 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 43139975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 12867918 - 12867968
Alignment:
Q  108 ctcacagttgtg--tgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||  ||||||||||||||  |||||||||||||||||||||||    
T  12867918 ctcacagttgtgagtgagtttattttca--gtggattaccacttcatctaaga 12867968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 55400301 - 55400355
Alignment:
Q  104 gaacctcacagttgt--gtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||| ||||||  |||||||||||||||  |||||||||||||||||||||||    
T  55400301 gaacctcatagttgtatgtgagtttattttca--gtggattaccacttcatctaaga 55400355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 238511 - 238459
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||| ||||    
T  238511 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatcgaaga 238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 238587 - 238543
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 86  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||    
T  238587 tgtctagaagtcctagctcaactgtcaaatgccgaaattgcaagg 238543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 2804525 - 2804581
Alignment:
Q  46 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||| || | |||||||||||||  ||||||| |||||||||||| |||||||    
T  2804525 tagaagtcttaatccaactgacaaatgctaaaattgtaaggtcggacgttgtgaccc 2804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 12735430 - 12735474
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 86  Q
    ||||||||||| |||| |||||||||||||| |||||||| ||||    
T  12735430 tgtctagaagtactagctcaactgacaaatgccaaaattgtaagg 12735474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 28798441 - 28798389
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    |||| |||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  28798441 accttacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 28798389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 37134048 - 37134096
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcgga 91  Q
    ||||||||||||||||||||||| ||||||   ||||| ||||||||||    
T  37134048 gtctagaagtcctagttcaactggcaaatgctgaaattacaaggtcgga 37134096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 41679375 - 41679431
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    |||| |||| |||| ||||||||||||||   ||||| |||||||||||||||||||    
T  41679375 tctaaaagttctagctcaactgacaaatgctgaaattacaaggtcggacgtcgtgac 41679431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 51287601 - 51287657
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||  || ||| |||||||||| |||||||| |||||| ||||||||||    
T  51287601 gtctagaagtcacagctcagctgacaaatgccaaaattgtaaggtcagacgtcgtga 51287657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 54768485 - 54768433
Alignment:
Q  106 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||| |  | ||||  |||||||||||||||||||||||||    
T  54768485 acctcacagttgtgtgcgagttttttttcagtggattaccacttcatctaaga 54768433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 55214727 - 55214779
Alignment:
Q  106 acctcacagttgtgt--gagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||  |||||||||||||  |||||||||||||| ||||||||    
T  55214727 acctcacagttgtgtatgagtttattttca--gtggattaccactttatctaaga 55214779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 35218756 - 35218641
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttg--tgtgagtttattttcacagtgga 140  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||||| | ||||||||||||  ||||||||||||||  |||||||    
T  35218756 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggacctcacagttgtgtgtgagtttatttt--cagtgga 35218659  T
Q  141 ttaccacttcatctaaga 158  Q
    ||||||||||||||||||    
T  35218658 ttaccacttcatctaaga 35218641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 24619207 - 24619148
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||  ||||||||||||||||||||||| |||| || ||||||||||||    
T  24619207 gtctagaagtcctaactcaactgacaaatgtcaaaattgtaaggccgaacgtcgtgaccc 24619148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 4464127 - 4464179
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||    
T  4464127 gtctagaagttctagttcaactgacaaatgccgaaattgcaaggccggacgtc 4464179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 16518491 - 16518548
Alignment:
Q  99 acccagaacctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||| | ||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  16518491 acccaggagctcacagttgtgtgagtttatttt--cagtggattaccatttcatctaaga 16518548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 28592245 - 28592129
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttg--tgtgagtttattttcacagtgg 139  Q
    |||||||||||||||| | ||||| |||||| | |||||  ||||  |||||| ||||||||  ||||||||||||  ||||||||||||||  || |||    
T  28592245 tgtctagaagtcctagcttaactggcaaatgccgaaattataaggctggacgttgtgacccaagacctcacagttgtgtgtgagtttatttt--caatgg 28592148  T
Q  140 attaccacttcatctaaga 158  Q
    ||||||| || ||||||||    
T  28592147 attaccaatttatctaaga 28592129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 33621493 - 33621553
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  33621493 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 33621553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 33704216 - 33704275
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  33704216 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 33704275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 5598887 - 5598847
Alignment:
Q  59 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  5598887 tcaactgacaaatgtcaaaattgcaaggccagacgtcgtga 5598847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 21000692 - 21000750
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| || ||||| |||||    
T  21000692 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacc 21000750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 7487392 - 7487331
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 104  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||| |||| |||||||| ||||    
T  7487392 gtctagaagtcctagatcaaccggcaaatgtcgaaattacaagatcgggcgtcgtgagccag 7487331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 21037365 - 21037417
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  ||| |||||||||||||||||||    
T  21037365 acctcacagttgtgtgtgagtttattttca--gtgaattaccacttcatctaaga 21037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 28322932 - 28322984
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    ||||||||||||||| ||||||| |||||| | |||||| |||| ||||||||    
T  28322932 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtc 28322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 33704291 - 33704343
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  ||||||||||||||||| |||||    
T  33704291 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatttaaga 33704343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 42578180 - 42578295
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt--tgtgtgagtttattttcacagtgga 140  Q
    ||||||||||||||| ||||||| |||||| | |||||||||||||||||||| |||||| | ||||||||||  ||||||||||||||||  |||||||    
T  42578180 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccggtacctcacagttgtgtgtgagtttatttt--cagtgga 42578277  T
Q  141 ttaccacttcatctaaga 158  Q
    ||||||||||||||||||    
T  42578278 ttaccacttcatctaaga 42578295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 34460368 - 34460496
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagt--tgtgtgagttta 127  Q
    |||||||||||||||| |||||||||||||| | ||||||||||| ||||||| |||            |||||||||||||||||  ||||||||||||    
T  34460368 tgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagttta 34460467  T
Q  128 ttttcacagtggattaccacttcatctaaga 158  Q
    ||||  |||||||||||||||||||||||||    
T  34460468 tttt--cagtggattaccacttcatctaaga 34460496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 11459714 - 11459774
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||||||||||| ||||||    
T  11459714 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgaccc 11459774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 11816681 - 11816621
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||| ||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||    
T  11816681 atgtccagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacc 11816621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 19537306 - 19537434
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagttgtgtgagtttatt 129  Q
    |||||||||||||||||||||||| |||||| | ||||||||||| ||||||| |||            |||| |||||||||||||||||| || | |     
T  19537306 tgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgtgttta 19537405  T
Q  130 ttcacagtggattaccacttcatctaaga 158  Q
    ||  |||||||||||||||||||||||||    
T  19537406 ttttcagtggattaccacttcatctaaga 19537434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 10639737 - 10639675
Alignment:
Q  40 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  10639737 aatgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 10639675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 39535664 - 39535603
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||    
T  39535664 atgtctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgaccc 39535603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 26605624 - 26605683
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  26605624 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 26605683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 33083682 - 33083623
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  33083682 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 33083623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 40786337 - 40786278
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||| ||  |||||||||||||| | ||||||||||| |||||||||||||||    
T  40786337 gtctagaagtcataactcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccc 40786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 23839859 - 23839917
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||||||  ||||||| |||||| ||||||||||||| ||||||| ||||||    
T  23839859 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 23839917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 45125220 - 45125166
Alignment:
Q  104 gaacctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  45125220 gaacctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 45125166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 6055136 - 6055079
Alignment:
Q  40 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgt 97  Q
    |||| ||||| ||||||| |||| ||||||||| |||||||||||||||| |||||||    
T  6055136 aatggctagatgtcctagctcaattgacaaatgccaaaattgcaaggtcgaacgtcgt 6055079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 8311345 - 8311390
Alignment:
Q  59 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 104  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||    
T  8311345 tcaactgacaaatgtcaaaattgcaagatcggacatcatgacccag 8311390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 10639659 - 10639607
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  10639659 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 10639607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 11708677 - 11708737
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | |||||| |||| ||||||| |||||||    
T  11708677 tgtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgaccc 11708737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 19816219 - 19816279
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||  | ||||||||||| ||||||| |||||||    
T  19816219 tgtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgaccc 19816279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 23839934 - 23839986
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  23839934 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 23839986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 29659271 - 29659219
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  29659271 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 29659219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 33083607 - 33083555
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  33083607 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 33083555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 34234530 - 34234578
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcgga 91  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||    
T  34234530 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcgga 34234578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 37197663 - 37197611
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  37197663 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 37197611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 38440322 - 38440266
Alignment:
Q  46 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||| | || |||||||||||||| | ||||||||||| |||||||||||||||    
T  38440322 tagaagttccagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccc 38440266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 15782590 - 15782649
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||| ||||||||| |||| ||||||||| | |||||| ||||||||||||| ||||||    
T  15782590 gtctaaaagtcctagctcaattgacaaatgccgaaattgtaaggtcggacgtcatgaccc 15782649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 34093240 - 34093299
Alignment:
Q  46 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccaga 105  Q
    |||||||  ||| ||||||||||||||||||||||  |||||||||||| |||| |||||    
T  34093240 tagaagttatagctcaactgacaaatgtcaaaattttaaggtcggacgttgtgatccaga 34093299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 7276017 - 7275959
Alignment:
Q  41 atgtctagaagtcctagttcaactgac-aaatgtcaaaattgcaaggtcggacgtcgtg 98  Q
    ||||||||||||||||  ||||||||| ||||| | |||||||||||||||| ||||||    
T  7276017 atgtctagaagtcctaactcaactgacaaaatgccgaaattgcaaggtcggatgtcgtg 7275959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 25501907 - 25501853
Alignment:
Q  47 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||| ||||||| ||||||   ||||||||||| ||||||||||||||    
T  25501907 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacc 25501853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 42025674 - 42025728
Alignment:
Q  47 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||| |||||||||||||||| |||||  |||| |||| |||||||||    
T  42025674 agaagtcctagctcaactgacaaatgtcgaaattttaaggccggatgtcgtgacc 42025728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 45125294 - 45125236
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    |||||||||||||||| ||||||| |||||| | |||||| |||| ||||||| |||||    
T  45125294 tgtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgac 45125236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 9815924 - 9815879
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtc 88  Q
    |||||||||| |||| ||||||||||||| ||||||||| ||||||    
T  9815924 gtctagaagttctagctcaactgacaaatatcaaaattgtaaggtc 9815879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 11708746 - 11708803
Alignment:
Q  99 acccagaacctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaa 156  Q
    |||||| |||||||||||||||| |  ||||||||||  |||||||||||||||||||||    
T  11708746 acccaggacctcacagttgtgtgtgggtttattttca--gtggattaccacttcatctaa 11708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 21312280 - 21312330
Alignment:
Q  106 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||| |||||||||||||||||   |||| |||||||||||||||||||    
T  21312280 acctcacaattgtgtgagtttatttt--tagtgaattaccacttcatctaaga 21312330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 29659348 - 29659303
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 86  Q
    ||||||||||||||||| ||||||| |||||| |||||||| ||||    
T  29659348 atgtctagaagtcctagctcaactggcaaatgccaaaattgtaagg 29659303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 43684156 - 43684194
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaa 156  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  43684156 tgtgtgagtttattttcac--tggattaccacttcatctaa 43684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 13106355 - 13106395
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgc 82  Q
    |||||||||||||||| |||||||  |||||||||||||||    
T  13106355 tgtctagaagtcctagctcaactggtaaatgtcaaaattgc 13106395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 19048754 - 19048806
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    ||||||||||||||| ||||||| |||||| | |||||| |||| ||||||||    
T  19048754 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtc 19048806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 26605699 - 26605751
Alignment:
Q  106 acctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  26605699 acctcacagttgtgtgtgaatttattttca--gtggattaccacttcatctaaga 26605751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 45202000 - 45201944
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    ||||||||||||||  |||| || |||||||| |||||| |||||||| ||||||||    
T  45202000 gtctagaagtcctaactcaattggcaaatgtcgaaattgtaaggtcggtcgtcgtga 45201944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 32143530 - 32143415
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttg--tgtgagtttattttcacagtgga 140  Q
    ||||||||||| ||| ||||||| |||||| ||||||||||||| ||||||| ||||||| | ||||||||||||  ||||||||||||||  |||||||    
T  32143530 gtctagaagtcatagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggacctcacagttgtgtgtgagtttatttt--cagtgga 32143433  T
Q  141 ttaccacttcatctaaga 158  Q
    ||||||||||||||||||    
T  32143432 ttaccacttcatctaaga 32143415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 11124650 - 11124710
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  11124650 atgtctagaagtcctagctcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacc 11124710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 17465091 - 17465204
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttgtgtgagtttattttcacagtggatt 142  Q
    ||||| ||||||||| ||| ||  |||||| | |||||||||||  ||||||| |||||| | |||||||| || ||| |||||| |||  |||||||||    
T  17465091 gtctaaaagtcctagctcagctagcaaatgccgaaattgcaaggctggacgtcatgacccgggacctcacaattttgtaagtttaattt--cagtggatt 17465188  T
Q  143 accacttcatctaaga 158  Q
    ||||||||||||||||    
T  17465189 accacttcatctaaga 17465204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 13203957 - 13204016
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||||||||||    
T  13203957 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgaccc 13204016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 40177623 - 40177682
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    |||||||||||||||| | |||||||||||||| ||||||||||| ||||||| ||||||    
T  40177623 tgtctagaagtcctagcttaactgacaaatgtcgaaattgcaaggccggacgttgtgacc 40177682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 27721428 - 27721490
Alignment:
Q  40 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||||| |||||||  ||||| | ||||||||| |||||||||||||||||    
T  27721428 aatgtctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgaccc 27721490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 1191669 - 1191612
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||    
T  1191669 tgtctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtga 1191612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 2970983 - 2971043
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| |||||||| ||||||| |||||| |||||| ||||| |||||||    
T  2970983 tgtctagaagtcctagctcaactgataaatgtcgaaattgtaaggtcagacgttgtgaccc 2971043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 3387030 - 3386974
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgt 97  Q
    ||||||| ||||||||||||||||| |||||| | ||||||||||| ||||||||||    
T  3387030 atgtctaaaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgt 3386974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 4825066 - 4825006
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 104  Q
    |||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||||    
T  4825066 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccag 4825006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 35317826 - 35317774
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 94  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||||||||||    
T  35317826 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgt 35317774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 21018223 - 21018282
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| ||||||||| ||| ||||||| |||||||    
T  21018223 gtctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgaccc 21018282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 3049173 - 3049123
Alignment:
Q  52 tcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  3049173 tcctagttcaactcacaaatgccaaaattgcaaggccggacgccgtgaccc 3049123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 21112049 - 21112107
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||| |  |||||||||||    
T  21112049 gtctagaagtcctagctcagctgacaaatgtcgaaattgcaaggacatacgtcgtgacc 21112107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 9722201 - 9722164
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattg 81  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9722201 tctagaagtcctagttcaactgacaaatgccaaaattg 9722164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 13204032 - 13204084
Alignment:
Q  106 acctcacagtt--gtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||  |||||||||||||||||  |||||||||||||||||||||||    
T  13204032 acctcacagttatgtgtgagtttattttca--gtggattaccacttcatctaaga 13204084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 21018298 - 21018350
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  21018298 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 21018350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 29265950 - 29266002
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  29265950 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 29266002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 31909438 - 31909386
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  31909438 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 31909386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 35317750 - 35317698
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  35317750 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 35317698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 12257443 - 12257483
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  12257443 tgtgtgagtttattttca--gtggattaccacttcatctaaga 12257483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 23262631 - 23262671
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  23262631 tgtgtgagtttattttca--gtggattaccacttcatctaaga 23262671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 8734000 - 8734054
Alignment:
Q  47 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||| ||||||| ||||||   ||||||||||| ||||||||||||||    
T  8734000 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacc 8734054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 2786271 - 2786327
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||||| ||||| || |||||| | |||||| ||||||||||| |||||    
T  2786271 gtctagaagtcctaattcaattggcaaatgccgaaattgtaaggtcggacgccgtga 2786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 2971059 - 2971111
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  |||||||||||   |||||||||||||||||||||||    
T  2971059 acctcacagttgtgtgtgagtttattttcg--gtggattaccacttcatctaaga 2971111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 4824992 - 4824940
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||   ||||||||||||||||||||||    
T  4824992 acctcacagttgtgtgtgagtttattttcaa--tggattaccacttcatctaaga 4824940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 6020995 - 6021051
Alignment:
Q  46 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||  |||| || |||||||||||||||||||| | ||||| |||||||    
T  6020995 tagaagtcctaactcaattggcaaatgtcaaaattgcaaggcctgacgttgtgaccc 6021051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 17984869 - 17984813
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    |||||||||||||| |||||||| ||| ||| |||||||||| | ||||||| ||||    
T  17984869 tctagaagtcctagctcaactgaaaaaggtcgaaattgcaagattggacgtcctgac 17984813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 34763454 - 34763560
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt--tgtgtgagtttattttcacagtgga 140  Q
    ||||||||||||||| |||||||  ||||||| ||||||||||| ||||||||||||||| | ||||||||||  |||||||||||| |||  |||||||    
T  34763454 gtctagaagtcctagctcaactggaaaatgtcgaaattgcaagggcggacgtcgtgacccgggacctcacagttgtgtgtgagtttaattt--cagtgga 34763551  T
Q  141 ttaccactt 149  Q
    |||||||||    
T  34763552 ttaccactt 34763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 8439081 - 8439137
Alignment:
Q  46 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  8439081 tagaagtcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgaccc 8439137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 25504060 - 25503999
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccca 103  Q
    |||||||||||  |||||||||||||||||||||||||||||| | |||||||||| |||||    
T  25504060 tgtctagaagttttagttcaactgacaaatgtcaaaattgcaaagccggacgtcgtaaccca 25503999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 44083939 - 44083999
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  44083939 tgtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 44083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 28111060 - 28111001
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    |||||||||||| ||  |||||||||||||||| |||||||||| |||||||||||||||    
T  28111060 tgtctagaagtcttaactcaactgacaaatgtcgaaattgcaagatcggacgtcgtgacc 28111001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 23036330 - 23036280
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 94  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  23036330 tctaaaagtcctagttcaactgacaaatgtcaaaattataaggtcggacgt 23036280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 43753878 - 43753824
Alignment:
Q  47 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  43753878 agaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacc 43753824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 7162841 - 7162791
Alignment:
Q  106 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  7162841 acctcacaattgtgtgagtttattttca--gtggattaccacttcatctaaga 7162791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 11355818 - 11355874
Alignment:
Q  38 ataatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 94  Q
    |||| |||||||||| ||||||||||| ||||||| | |||||||||||||||||||    
T  11355818 ataaagtctagaagttctagttcaactaacaaatgccgaaattgcaaggtcggacgt 11355874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 27229600 - 27229548
Alignment:
Q  49 aagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||  |||||||||||||||| ||||||||||| ||||||||||||||    
T  27229600 aagtcctaactcaactgacaaatgtcgaaattgcaaggccggacgtcgtgacc 27229548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 29255717 - 29255773
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||| |||| ||||||| |||||| |||||||||||||| |||||||||||    
T  29255717 gtctagaagttctagctcaactggcaaatgccaaaattgcaaggttggacgtcgtga 29255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 25112376 - 25112317
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    |||||||||||||||| ||||||| |||||  | |||||||||||||||||||| |||||    
T  25112376 tgtctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacc 25112317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 27737999 - 27737944
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgt 97  Q
    |||||| ||||||||  ||||||||||||| |||||||||||||||||||| ||||    
T  27737999 tgtctataagtcctaactcaactgacaaatatcaaaattgcaaggtcggacatcgt 27737944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 40058238 - 40058297
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||  ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  40058238 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 40058297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 43171069 - 43171006
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 104  Q
    ||||||| ||||||||  |||||||||||||| | ||||||||||| |||||||||| ||||||    
T  43171069 atgtctataagtcctaactcaactgacaaatgccgaaattgcaaggccggacgtcgtaacccag 43171006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 32606459 - 32606397
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 104  Q
    ||||||||||| |||  |||||||||||||  | ||||||||||| |||||||||||||||||    
T  32606459 tgtctagaagttctaactcaactgacaaataccgaaattgcaaggccggacgtcgtgacccag 32606397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 47250378 - 47250320
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  47250378 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 47250320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 3838607 - 3838660
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    |||||| ||||  ||||| ||||||||||||||||||||||||||||| |||||    
T  3838607 tgtctataagtattagtttaactgacaaatgtcaaaattgcaaggtcgaacgtc 3838660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 42081670 - 42081620
Alignment:
Q  106 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  42081670 acctcacagttgtgtgagtttatttt--cagtgaattaccactttatctaaga 42081620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 46427360 - 46427417
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    ||||| |||| |||| ||||||||||||| ||||||||||||||| ||||||| ||||    
T  46427360 gtctaaaagttctagctcaactgacaaatatcaaaattgcaaggttggacgtcatgac 46427417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 2146635 - 2146695
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| |||||||  ||||| | ||||||||||| ||||||| |||||||    
T  2146635 tgtctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgaccc 2146695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 4106813 - 4106865
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  4106813 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 4106865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 4107384 - 4107436
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  4107384 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 4107436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 23358184 - 23358244
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||  | ||||||||||| |||||||||| ||||    
T  23358184 tgtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaaccc 23358244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 23358260 - 23358312
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  23358260 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 23358312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 25546404 - 25546344
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| |||||||  ||||| | ||||||||||| |||||||| ||||||    
T  25546404 tgtctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgaccc 25546344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 27915711 - 27915651
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||||||||  |||||||  |||||   ||||||||||||||||||||||||||    
T  27915711 atgtctagaagtcctaactcaactggtaaatgctgaaattgcaaggtcggacgtcgtgacc 27915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 31770585 - 31770533
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  31770585 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 31770533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 31770661 - 31770601
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||| ||| ||||||    
T  31770661 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgaccc 31770601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 38781261 - 38781209
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  38781261 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 38781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 40058313 - 40058365
Alignment:
Q  106 acctcacagttgtgt--gagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||  |||||||||||||  |||||||||||||||||||||||    
T  40058313 acctcacagttgtgtatgagtttattttca--gtggattaccacttcatctaaga 40058365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 4106738 - 4106797
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||  |||||| |||||| | ||||||||||| |||||||| ||||||    
T  4106738 gtctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 4106797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 19630709 - 19630669
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  19630709 tgtgtgagtttattttca--gtggattaccacttcatctaaga 19630669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 47250292 - 47250252
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  47250292 tgtgtgagtttattttca--gtggattaccacttcatctaaga 47250252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 47570759 - 47570719
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  47570759 tgtgtgagtttattttca--gtggattaccacttcatctaaga 47570719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 7298253 - 7298191
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccaga 105  Q
    ||||||||||  ||| |||||||| ||||| |||||||  ||||||||| |||||||||||||    
T  7298253 gtctagaagttatagctcaactgataaatgccaaaattataaggtcggatgtcgtgacccaga 7298191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 42081743 - 42081693
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 94  Q
    |||||||||||||| ||| ||| ||||||||||||||||||| ||| ||||    
T  42081743 tctagaagtcctagctcagctggcaaatgtcaaaattgcaagatcgaacgt 42081693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 44084015 - 44084065
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaa 156  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  44084015 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaa 44084065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 2146711 - 2146763
Alignment:
Q  106 acctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  2146711 acctcacagttgtgtgtgggtttattttca--gtggattaccacttcatctaaga 2146763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 8439153 - 8439205
Alignment:
Q  106 acctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  8439153 acctcacagttgtgtgtgaatttattttca--gtggattaccacttcatctaaga 8439205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 18506403 - 18506355
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcgga 91  Q
    |||||||||||||||  ||||| | |||||| |||||||||||||||||    
T  18506403 gtctagaagtcctagcacaactaaaaaatgttaaaattgcaaggtcgga 18506355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 25112300 - 25112248
Alignment:
Q  106 acctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  25112300 acctcacagttgtgtgtgggtttattttca--gtggattaccacttcatctaaga 25112248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 41183890 - 41183942
Alignment:
Q  106 acctcacagtt--gtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||  |||||||||||||||||  |||||||| ||||||||||||||    
T  41183890 acctcacagttatgtgtgagtttattttca--gtggattatcacttcatctaaga 41183942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 45813141 - 45813080
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||    
T  45813141 atgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgaccc 45813080  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 41761540 - 41761480
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||||||||||| |||||| | ||||||||||| ||||||| |||||||    
T  41761540 tgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 41761480  T

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Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 192415 - 192542
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagt--tgtgtgagtttat 128  Q
    ||||||||||||||| ||||||||||||||  |||||||||||| ||||||| |||            |||||| ||||||||||  |||||||||||||    
T  192415 gtctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagtttat 192514  T
Q  129 tttcacagtggattaccacttcatctaaga 158  Q
    |||  ||| |||||||||||||||||||||    
T  192515 ttt--cagcggattaccacttcatctaaga 192542  T

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Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 5943682 - 5943740
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||| |||||| |||||||||||||| | ||||||||||| |||||||||||||||    
T  5943682 tctagaattcctagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccc 5943740  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 41808202 - 41808329
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagt--tgtgtgagtttat 128  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||            |||| ||||||||||||  |||||||||||||    
T  41808202 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 41808301  T
Q  129 tttcacagtggattaccacttcatctaaga 158  Q
    |||  |||||||||||||||||||||||||    
T  41808302 ttt--cagtggattaccacttcatctaaga 41808329  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 28455874 - 28455933
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  28455874 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 28455933  T

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Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 29587255 - 29587310
Alignment:
Q  46 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    |||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||||    
T  29587255 tagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacc 29587310  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 32007074 - 32007133
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  32007074 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 32007133  T

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Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 13109770 - 13109897
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc------------agaacctcacagt--tgtgtgagtttat 128  Q
    |||||||||| |||| | ||||||||||||   |||||||||||||||||||||| ||||            |||||||||||||  ||||||||||||     
T  13109770 gtctagaagttctagcttaactgacaaatgattaaattgcaaggtcggacgtcgtaacccgaattcgaacctagaacctcacagttgtgtgtgagtttaa 13109869  T
Q  129 tttcacagtggattaccacttcatctaaga 158  Q
    |||  |||||||||||||||||||||||||    
T  13109870 ttt--cagtggattaccacttcatctaaga 13109897  T

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Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 34305770 - 34305708
Alignment:
Q  38 ataatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    |||| ||||| ||||||||| ||||| || ||||||||||||| ||||| |||||||||||||    
T  34305770 ataacgtctaaaagtcctagctcaaccgataaatgtcaaaatttcaaggccggacgtcgtgac 34305708  T

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Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 47111473 - 47111515
Alignment:
Q  59 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  47111473 tcaactgacaaatgccgaaattgcaaggtcggacgtcgtgacc 47111515  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 7059489 - 7059526
Alignment:
Q  65 gacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7059489 gacaaatgtcaaaattgcaaggtcagacgtcgtgaccc 7059526  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 39284289 - 39284346
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||| ||| ||||||||| |||||  |||||| |||||||||||||||||    
T  39284289 tgtctagaagtcatagctcaactgacgaatgttgaaattgtaaggtcggacgtcgtga 39284346  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 5055841 - 5055789
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  5055841 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 5055789  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 26032798 - 26032860
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggt---cggacgtcgtgaccc 102  Q
    |||||||||||||| ||||||||||||||| | |||||| |||||   |||||||||||||||    
T  26032798 gtctagaagtcctaattcaactgacaaatgccgaaattgtaaggtcggcggacgtcgtgaccc 26032860  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 28455949 - 28456001
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  28455949 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 28456001  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 32007149 - 32007201
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  32007149 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 32007201  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 41039356 - 41039304
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  41039356 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 41039304  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 45813064 - 45813012
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  45813064 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 45813012  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 48660021 - 48660073
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 94  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||    
T  48660021 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgt 48660073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 5055916 - 5055857
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||| ||| |||||| | ||||||||||| |||||||| ||||||    
T  5055916 gtctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgaccc 5055857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11688263 - 11688322
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||||||||| || ||||||||||  || |||| |||||||    
T  11688263 gtctagaagtcctagctcaactgacaaatatcgaaattgcaagcccgaacgttgtgaccc 11688322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 35945865 - 35945924
Alignment:
Q  99 acccagaacctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 158  Q
    |||| |||||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  35945865 acccggaacctcacagttgtgtgtgaatttattttca--gtggattaccacttcatctaaga 35945924  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 48660109 - 48660149
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  48660109 tgtgtgagtttattttca--gtggattaccacttcatctaaga 48660149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 2089033 - 2088976
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    ||||||||||||||| ||||||| ||||| || |||||| |||||| ||| |||||||    
T  2089033 gtctagaagtcctagctcaactggcaaatatcgaaattgtaaggtcagacatcgtgac 2088976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 3688364 - 3688307
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    ||||| || ||||||||||||||||||||  |||||||||||||  |||||| |||||    
T  3688364 gtctaaaaatcctagttcaactgacaaattccaaaattgcaaggaaggacgttgtgac 3688307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 46447507 - 46447462
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 86  Q
    |||||||||||| |||||||||||| |||||| | |||||||||||    
T  46447507 atgtctagaagttctagttcaactggcaaatgccgaaattgcaagg 46447462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 20823 - 20875
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  |||||||||| |  |||||||||||||||||||||||    
T  20823 acctcacagttgtgtgtgagtttattttta--gtggattaccacttcatctaaga 20875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 29994511 - 29994459
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| | ||||||    
T  29994511 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtc 29994459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 39111950 - 39111990
Alignment:
Q  59 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  39111950 tcaactgacaaatgtcgaaattgcaaggccggatgtcgtga 39111990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 39276357 - 39276409
Alignment:
Q  50 agtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  39276357 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 39276409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 39276425 - 39276477
Alignment:
Q  106 acctcacagtt--gtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||| |||||    
T  39276425 acctcacagttatgtgtgagtttattttca--gtggattaccacttcatttaaga 39276477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 41761464 - 41761412
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||| ||||    
T  41761464 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatccaaga 41761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 55018163 - 55018103
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||||    
T  55018163 tgtctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgaccc 55018103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 28844502 - 28844632
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc------------agaacctcacagt--tgtgtgagttt 126  Q
    |||||||||||| |||| |||||||||||||| | ||||||||||| ||||||| |||||||             ||||||||||||  |||||||||||    
T  28844502 atgtctagaagttctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagttt 28844601  T
Q  127 attttcacagtggattaccacttcatctaaga 158  Q
    |||||  |||||||||||||||||||||||||    
T  28844602 atttt-tcagtggattaccacttcatctaaga 28844632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 43247778 - 43247720
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||||    
T  43247778 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 43247720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 47770329 - 47770383
Alignment:
Q  47 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||| |||||||| ||||||| |||||||||| |||||||||||||||    
T  47770329 agaagtcctagctcaactgataaatgtcgaaattgcaagctcggacgtcgtgacc 47770383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 7824583 - 7824523
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  7824583 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 7824523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 29689611 - 29689551
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  29689611 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 29689551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 42392933 - 42392881
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||||||    
T  42392933 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtc 42392881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 1778851 - 1778910
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| |||||||||||||| | ||||||||||| ||||| | |||||||    
T  1778851 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgaccc 1778910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 4601425 - 4601484
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  4601425 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 4601484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 54151809 - 54151750
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  54151809 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 54151750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 51666053 - 51665995
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 101  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| |||||    
T  51666053 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacc 51665995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 54158266 - 54158393
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagt--tgtgtgagtttat 128  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||            |||| | ||||||||||  |||||||||||||    
T  54158266 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 54158365  T
Q  129 tttcacagtggattaccacttcatctaaga 158  Q
    |||  |||||||||||||||||||||||||    
T  54158366 ttt--cagtggattaccacttcatctaaga 54158393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 28458662 - 28458719
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||||||  |||||||||||||||| ||||||||||| | || |||||||    
T  28458662 tgtctagaagtcctaactcaactgacaaatgtcgaaattgcaaggccagatgtcgtga 28458719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 41377584 - 41377645
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 104  Q
    ||||||||||||||| ||||||| |||||| |||||||| |||| |||||||| ||| ||||    
T  41377584 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccggacgtcatgatccag 41377645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 448987 - 448947
Alignment:
Q  59 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  448987 tcaactgacaaatgtcaaaattgtaaggccggacgtcgtga 448947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 7824507 - 7824455
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  7824507 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 7824455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 29689535 - 29689483
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  29689535 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 29689483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 35461607 - 35461551
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||| |||| ||||||| |||||| | ||||||||||||||||||| ||||    
T  35461607 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtga 35461551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 43247703 - 43247651
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  43247703 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 43247651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 50729524 - 50729580
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||| |||| |||||||||||||| | |||||| |||||| ||||||||||    
T  50729524 gtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtga 50729580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 50783325 - 50783269
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||| |||| |||||||||||||| | |||||| |||||| ||||||||||    
T  50783325 gtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtga 50783269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 52500838 - 52500890
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    ||||||||||||||| ||||||| |||||||| |||||| |||| ||||||||    
T  52500838 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtc 52500890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 54151734 - 54151682
Alignment:
Q  106 acctcacagttgtgt--gagtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||  |||||||||||||  |||||||||||||||||||||||    
T  54151734 acctcacagttgtgtatgagtttattttca--gtggattaccacttcatctaaga 54151682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 3113036 - 3112996
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  3113036 tgtgtgagtttattttca--gtggattaccacttcatctaaga 3112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 9349791 - 9349748
Alignment:
Q  56 agttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||| |||||| | ||||||||||||||||||||||||    
T  9349791 agttcaactggcaaatgccgaaattgcaaggtcggacgtcgtga 9349748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 51665966 - 51665926
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  51665966 tgtgtgagtttattttca--gtggattaccacttcatctaaga 51665926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 55320441 - 55320401
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  55320441 tgtgtgagtttattttca--gtggattaccacttcatctaaga 55320401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 4601498 - 4601552
Alignment:
Q  104 gaacctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  ||||||||||||  ||||||||||| |||||||||||    
T  4601498 gaacctcacagttgtgtgtgagtttattttca--gtggattaccagttcatctaaga 4601552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 7958569 - 7958607
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattg 81  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  7958569 gtctagaagtcctacctcaactgacaaatgtcaaaattg 7958607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 9349729 - 9349679
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaa 156  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  9349729 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaa 9349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 40756856 - 40756806
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacg 93  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| ||||    
T  40756856 gtctagaagtcctaactcaactgaaaaatgccaaaattgcaaggtcagacg 40756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 51054702 - 51054752
Alignment:
Q  44 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 94  Q
    |||||||||||||  |||||||||||||||| ||||| |||||||| ||||    
T  51054702 tctagaagtcctaactcaactgacaaatgtcgaaattacaaggtcgaacgt 51054752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 52500912 - 52500965
Alignment:
Q  105 aacctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    |||||||||||||||||  ||||||||||||  || ||||||||||||||||||||    
T  52500912 aacctcacagttgtgtgtgagtttattttca--gtagattaccacttcatctaaga 52500965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 8137748 - 8137700
Alignment:
Q  54 ctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||| |||||| |||||||  ||||||||||||||||||||| ||||||    
T  8137748 ctagctcaactaacaaatgcaaaaattgcaaggtcggacgtcatgaccc 8137700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 36229047 - 36228995
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||   ||||||||||||||||||||||    
T  36229047 acctcacagttgtgtgtgagtttattttcaa--tggattaccacttcatctaaga 36228995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 10963293 - 10963243
Alignment:
Q  106 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  10963293 acctcacagttgtgtgagtttatttt--cagtggattaccacttcatctaaga 10963243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 6099571 - 6099631
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| |||||||| ||||||    
T  6099571 tgtctagaagtcctagttcaacttgcaaatgtcgaaattgcaaggccggacgtcatgaccc 6099631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 39435282 - 39435334
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  39435282 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtc 39435334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 70651 - 70592
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | |||||||||||||||||||| ||||||    
T  70651 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgaccc 70592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 12534846 - 12534721
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagttgtgtgagtttattt 130  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||||||            |||||| | |||||||||| ||||||||||||    
T  12534846 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagttgcgtgagtttattt 12534747  T
Q  131 tcacagtggattaccacttcatctaaga 158  Q
    |  |||| ||||||||||||||||||||    
T  12534746 t--cagtagattaccacttcatctaaga 12534721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 22979601 - 22979660
Alignment:
Q  40 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||| ||| |||||||||    
T  22979601 aatgtctagaagtcctagctcaactggcaaatgtcgaaattgcaagctcgaacgtcgtga 22979660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 35779625 - 35779566
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  35779625 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 35779566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 42192769 - 42192708
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  42192769 atgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 42192708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 1469 - 1409
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||| |||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  1469 tgtctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 1409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 3822395 - 3822455
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||| |||||||||||| |||||| | |||||| |||||||||||| |||||||    
T  3822395 tgtctagaagttctagttcaactggcaaatgccgaaattgtaaggtcggacgttgtgaccc 3822455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 18752345 - 18752397
Alignment:
Q  47 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||||||||||||||||||||||  | |||||| |||||||||||||||||    
T  18752345 agaagtcctagttcaactgacaaataccgaaattgtaaggtcggacgtcgtga 18752397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 28817255 - 28817315
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  28817255 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 28817315  T

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Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 29425356 - 29425416
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| |||| || |||||| ||||||||||||| |||||||| ||||||    
T  29425356 tgtctagaagtcctagctcaattggcaaatgccaaaattgcaaggccggacgtcatgaccc 29425416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 32333113 - 32333173
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  32333113 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 32333173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 41753108 - 41753052
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    ||||||||||||||| |||||||||||||||| ||||||||||  |||| |||||||    
T  41753108 gtctagaagtcctagctcaactgacaaatgtcgaaattgcaagaccggatgtcgtga 41753052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 6602646 - 6602587
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  6602646 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 6602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 6678099 - 6678040
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  6678099 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 6678040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 40911221 - 40911280
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||||||||| |||| ||||||| |||||| | ||||||||||| |||||||||||||||    
T  40911221 gtctagaagtgctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgaccc 40911280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 7403807 - 7403765
Alignment:
Q  58 ttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  7403807 ttcaactgccaaatgtcaaaattgtaaggtcggacgtcgtgac 7403765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 41849361 - 41849303
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    |||||| |||||| || |||||||| |||||| | ||||||||||||||||||||||||    
T  41849361 atgtctggaagtcttaattcaactggcaaatgccgaaattgcaaggtcggacgtcgtga 41849303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 1393 - 1341
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  1393 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 70576 - 70524
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  70576 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 70524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 1078701 - 1078649
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  1078701 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 1078649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 6602571 - 6602519
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  6602571 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 6602519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 6678024 - 6677972
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  6678024 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 6677972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 9292105 - 9292146
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaagaa 159  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  9292105 tgtgtgagtttattttca--gtggattaccacttcatctaagaa 9292146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 20269542 - 20269658
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt--tgtgtgagtttattttcacagtgga 140  Q
    ||||| ||||| ||| ||||||| |||||  | |||||| |||| ||||||| |||| |||  | ||||||||  ||||||||||||||||  || ||||    
T  20269542 gtctaaaagtcttagctcaactggcaaataccgaaattgtaaggccggacgttgtgatccaagatctcacagttgtgtgtgagtttatttt--caatgga 20269639  T
Q  141 ttaccacttcatctaagaa 159  Q
    |||||| ||||||||||||    
T  20269640 ttaccatttcatctaagaa 20269658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 21056171 - 21056287
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt--tgtgtgagtttattttcacagtgga 140  Q
    ||||| ||||| ||| ||||||| |||||  | |||||| |||| ||||||| |||| |||  | ||||||||  ||||||||||||||||  || ||||    
T  21056171 gtctaaaagtcttagctcaactggcaaataccgaaattgtaaggccggacgttgtgatccaagatctcacagttgtgtgtgagtttatttt--caatgga 21056268  T
Q  141 ttaccacttcatctaagaa 159  Q
    |||||| ||||||||||||    
T  21056269 ttaccatttcatctaagaa 21056287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 32333189 - 32333241
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  32333189 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 32333241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 35779550 - 35779498
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  35779550 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 35779498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 9292018 - 9292077
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||||| |||||| || | ||||||| |||||||    
T  9292018 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaagccggacgttgtgaccc 9292077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 42885261 - 42885301
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  42885261 tgtgtgagtttattttca--gtggattaccacttcatctaaga 42885301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 7813397 - 7813447
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaa 156  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  7813397 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaa 7813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 18386707 - 18386765
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    ||||||||||| |||| ||||||||||||||   |||||||||||||||| ||| ||||    
T  18386707 tgtctagaagttctagctcaactgacaaatgctgaaattgcaaggtcggatgtcatgac 18386765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 28817333 - 28817383
Alignment:
Q  108 ctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  28817333 ctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 28817383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 39303308 - 39303366
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    |||| ||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||    
T  39303308 tgtcaagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgac 39303366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 42192690 - 42192640
Alignment:
Q  108 ctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  42192690 ctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 42192640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 1078776 - 1078715
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 104  Q
    ||||||||||| ||| |||||||  ||||| | ||||||||||| |||||||| ||||||||    
T  1078776 gtctagaagtcgtagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccag 1078715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 4531112 - 4531051
Alignment:
Q  41 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||||| |||| || |||||| | |||||||||||  ||||||| ||||||    
T  4531112 atgtctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgaccc 4531051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 7792661 - 7792718
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    ||||||||||||||| ||||||| |||||| | |||||||||||  |||||| |||||    
T  7792661 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggctggacgttgtgac 7792718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 31695398 - 31695353
Alignment:
Q  42 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggt 87  Q
    ||||||||||| |||| ||||||| || ||||||||||||||||||    
T  31695398 tgtctagaagttctagctcaactggcacatgtcaaaattgcaaggt 31695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 2907090 - 2907141
Alignment:
Q  106 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||| || ||||||| ||||| |||||||||||||||| |||||||    
T  2907090 acctcacagttatgggagtttaatttca-agtggattaccacttcgtctaaga 2907141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 13891165 - 13891217
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||| ||||||||||||||||||    
T  13891165 acctcacagttgtgtgtgagtttattttca--gtggtttaccacttcatctaaga 13891217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 45264770 - 45264711
Alignment:
Q  40 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    |||||||||||||||||  ||||||| |||||| | ||||||| |||||| ||||||||||    
T  45264770 aatgtctagaagtcctaactcaactggcaaatgccgaaattgc-aggtcgaacgtcgtgac 45264711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 56481 - 56540
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||||| |||||||    
T  56481 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgaccc 56540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 56556 - 56608
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  56556 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 56608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 990 - 931
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  990 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 915 - 863
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  915 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 10101 - 10042
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||||| ||||    
T  10101 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaaccc 10042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 10014 - 9974
Alignment:
Q  116 tgtgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  10014 tgtgtgagtttattttca--gtggattaccacttcatctaaga 9974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 34822 - 34875
Alignment:
Q  47 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 100  Q
    ||||||||||| ||||||| |||||| | ||||||||||| |||||||||||||    
T  34822 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgac 34875  T

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Target: scaffold0360 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 14495 - 14551
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    ||||| |||||||||  || |||||||||||| ||||||||||| ||||||||||||    
T  14495 gtctataagtcctagcacagctgacaaatgtcgaaattgcaaggccggacgtcgtga 14551  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 14004 - 13952
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  14004 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 13952  T

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Target: scaffold0119; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 19684 - 19632
Alignment:
Q  106 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  19684 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 19632  T

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Target: scaffold0119; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 14079 - 14023
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    ||||||||||||||| ||||||| |||||  | ||||||||||| ||||||| ||||    
T  14079 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtga 14023  T

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Target: scaffold0119; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 19759 - 19703
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 99  Q
    ||||||||||||||| ||||||| |||||  | ||||||||||| ||||||| ||||    
T  19759 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtga 19703  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 22174 - 22222
Alignment:
Q  54 ctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 102  Q
    |||| |||||||||||||| | |||||| |||| |||||||||||||||    
T  22174 ctagctcaactgacaaatgccgaaattgtaaggccggacgtcgtgaccc 22222  T

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Target: scaffold0053; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 22238 - 22290
Alignment:
Q  106 acctcacagttg--tgtgagtttattttcacagtggattaccacttcatctaaga 158  Q
    ||||||||||||  |||||||||| |||||  |||||||||||||||||||||||    
T  22238 acctcacagttgcgtgtgagtttaatttca--gtggattaccacttcatctaaga 22290  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 114252 - 114304
Alignment:
Q  43 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 95  Q
    ||||||||||||||| ||||||| |||||| | |||||| |||| ||||||||    
T  114252 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtc 114304  T

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