View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2335_low_40 (Length: 226)

Name: NF2335_low_40
Description: NF2335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2335_low_40
NF2335_low_40
[»] chr6 (32 HSPs)
chr6 (45-151)||(28675318-28675424)
chr6 (45-148)||(32702375-32702478)
chr6 (45-147)||(33696867-33696969)
chr6 (45-145)||(17175816-17175916)
chr6 (45-147)||(17705262-17705363)
chr6 (45-145)||(18365369-18365469)
chr6 (45-145)||(18370633-18370733)
chr6 (45-147)||(23290874-23290976)
chr6 (45-145)||(33695121-33695221)
chr6 (45-145)||(2309218-2309318)
chr6 (48-143)||(6031537-6031632)
chr6 (55-159)||(11548370-11548474)
chr6 (45-147)||(29693615-29693718)
chr6 (45-114)||(18889470-18889539)
chr6 (79-144)||(34238883-34238948)
chr6 (45-104)||(6127447-6127506)
chr6 (69-141)||(17176009-17176082)
chr6 (69-141)||(17705453-17705526)
chr6 (69-141)||(33695315-33695388)
chr6 (69-141)||(33696700-33696773)
chr6 (67-145)||(582522-582602)
chr6 (92-145)||(2121004-2121058)
chr6 (69-141)||(6127279-6127352)
chr6 (69-141)||(23291072-23291145)
chr6 (69-141)||(28675152-28675225)
chr6 (79-141)||(8515723-8515786)
chr6 (69-139)||(11548576-11548647)
chr6 (79-141)||(25986934-25986997)
chr6 (69-141)||(18365561-18365634)
chr6 (69-141)||(18370825-18370898)
chr6 (45-77)||(9752109-9752141)
chr6 (69-141)||(18889685-18889757)
[»] chr4 (48 HSPs)
chr4 (45-146)||(21802114-21802215)
chr4 (45-147)||(22199429-22199531)
chr4 (45-147)||(46442014-46442116)
chr4 (45-145)||(36073519-36073619)
chr4 (45-147)||(53123201-53123303)
chr4 (46-146)||(10442581-10442682)
chr4 (45-146)||(44893007-44893108)
chr4 (45-145)||(44893596-44893696)
chr4 (45-147)||(2625007-2625109)
chr4 (45-143)||(9089040-9089138)
chr4 (45-143)||(24128409-24128507)
chr4 (45-147)||(36073121-36073223)
chr4 (45-147)||(47290236-47290338)
chr4 (45-147)||(49387680-49387782)
chr4 (45-145)||(33530479-33530579)
chr4 (45-147)||(4751617-4751719)
chr4 (45-147)||(31078612-31078714)
chr4 (45-146)||(7744906-7745007)
chr4 (45-146)||(50156373-50156473)
chr4 (45-143)||(17655600-17655699)
chr4 (45-135)||(23964269-23964359)
chr4 (48-148)||(11314043-11314144)
chr4 (45-147)||(37219801-37219904)
chr4 (47-145)||(42671840-42671939)
chr4 (45-146)||(37934735-37934837)
chr4 (45-114)||(30563379-30563448)
chr4 (55-143)||(24392854-24392942)
chr4 (79-145)||(25063369-25063436)
chr4 (53-144)||(44744610-44744698)
chr4 (69-141)||(33530676-33530749)
chr4 (53-145)||(36073256-36073349)
chr4 (69-132)||(36073731-36073795)
chr4 (69-141)||(10442777-10442850)
chr4 (69-141)||(31078807-31078880)
chr4 (69-141)||(49387876-49387949)
chr4 (69-141)||(2624841-2624914)
chr4 (69-141)||(7745100-7745173)
chr4 (69-141)||(21802310-21802383)
chr4 (69-141)||(22199265-22199338)
chr4 (69-141)||(24392671-24392744)
chr4 (69-141)||(36072951-36073024)
chr4 (69-141)||(46441848-46441921)
chr4 (69-141)||(47290070-47290143)
chr4 (69-141)||(53123034-53123108)
chr4 (69-141)||(4751450-4751523)
chr4 (69-141)||(24128243-24128316)
chr4 (69-141)||(36073354-36073427)
chr4 (69-141)||(44893430-44893503)
[»] chr3 (40 HSPs)
chr3 (45-150)||(19650690-19650795)
chr3 (45-147)||(3137207-3137309)
chr3 (45-147)||(3456234-3456336)
chr3 (45-147)||(22426138-22426240)
chr3 (45-147)||(33113964-33114066)
chr3 (45-147)||(34482681-34482783)
chr3 (45-147)||(37216846-37216948)
chr3 (45-145)||(3574321-3574421)
chr3 (45-145)||(30385570-30385670)
chr3 (45-144)||(8320378-8320477)
chr3 (45-147)||(6042047-6042149)
chr3 (45-151)||(48161076-48161182)
chr3 (45-145)||(3089589-3089689)
chr3 (45-143)||(33145882-33145980)
chr3 (45-145)||(2754889-2754989)
chr3 (45-145)||(37522223-37522323)
chr3 (53-147)||(36864825-36864920)
chr3 (55-147)||(40328011-40328104)
chr3 (45-145)||(47738281-47738382)
chr3 (55-147)||(8361832-8361924)
chr3 (45-145)||(26612916-26613017)
chr3 (45-133)||(33839705-33839794)
chr3 (55-145)||(9796824-9796914)
chr3 (46-145)||(24343720-24343820)
chr3 (55-146)||(41224414-41224505)
chr3 (45-143)||(42921295-42921394)
chr3 (45-144)||(46919064-46919164)
chr3 (45-145)||(42298032-42298122)
chr3 (69-141)||(6041888-6041961)
chr3 (56-130)||(41883031-41883106)
chr3 (69-141)||(2754721-2754794)
chr3 (69-141)||(3137402-3137475)
chr3 (69-141)||(3574515-3574588)
chr3 (69-133)||(9797017-9797082)
chr3 (69-133)||(47738117-47738182)
chr3 (69-141)||(33145717-33145789)
chr3 (69-114)||(8362033-8362078)
chr3 (69-141)||(11347272-11347345)
chr3 (45-82)||(11347439-11347476)
chr3 (69-141)||(37217041-37217114)
[»] chr8 (55 HSPs)
chr8 (45-145)||(6108028-6108128)
chr8 (45-146)||(26041907-26042008)
chr8 (45-146)||(32064916-32065017)
chr8 (45-146)||(37985850-37985951)
chr8 (45-146)||(40779923-40780024)
chr8 (45-145)||(10044518-10044618)
chr8 (45-145)||(17841645-17841745)
chr8 (45-145)||(25581034-25581134)
chr8 (45-144)||(14129029-14129128)
chr8 (45-147)||(1645757-1645859)
chr8 (45-143)||(24211169-24211267)
chr8 (45-146)||(15187730-15187831)
chr8 (51-146)||(1503637-1503732)
chr8 (45-143)||(20091598-20091696)
chr8 (45-143)||(34665551-34665649)
chr8 (46-143)||(38017103-38017201)
chr8 (45-145)||(3596836-3596936)
chr8 (45-145)||(30055686-30055786)
chr8 (45-145)||(42754837-42754937)
chr8 (45-134)||(39772608-39772697)
chr8 (57-147)||(31347569-31347659)
chr8 (46-143)||(37132477-37132575)
chr8 (45-133)||(32394027-32394114)
chr8 (45-133)||(35353211-35353299)
chr8 (45-120)||(8454003-8454078)
chr8 (55-147)||(7022159-7022251)
chr8 (53-114)||(41819594-41819655)
chr8 (53-142)||(3890412-3890502)
chr8 (65-146)||(30834849-30834931)
chr8 (55-147)||(7017651-7017743)
chr8 (45-145)||(24844655-24844756)
chr8 (69-142)||(24844847-24844920)
chr8 (69-141)||(8453838-8453911)
chr8 (69-141)||(26042104-26042177)
chr8 (69-141)||(27782105-27782178)
chr8 (69-141)||(32064749-32064822)
chr8 (69-141)||(34665386-34665459)
chr8 (69-114)||(15972865-15972910)
chr8 (69-141)||(17841838-17841911)
chr8 (69-141)||(20091789-20091862)
chr8 (48-105)||(27835288-27835345)
chr8 (69-141)||(31347770-31347843)
chr8 (69-141)||(40780117-40780190)
chr8 (69-133)||(42755030-42755095)
chr8 (69-140)||(25581227-25581299)
chr8 (95-133)||(1886633-1886672)
chr8 (69-141)||(7017853-7017926)
chr8 (69-133)||(7021990-7022055)
chr8 (69-141)||(14128868-14128941)
chr8 (69-141)||(15187564-15187637)
chr8 (69-141)||(32393862-32393935)
chr8 (69-141)||(35353045-35353118)
chr8 (69-141)||(37986043-37986116)
chr8 (69-133)||(30835035-30835099)
chr8 (78-133)||(38016983-38017039)
[»] chr5 (36 HSPs)
chr5 (45-145)||(8145543-8145643)
chr5 (45-146)||(4892372-4892473)
chr5 (45-145)||(33584124-33584224)
chr5 (45-147)||(25398408-25398510)
chr5 (45-146)||(3521801-3521902)
chr5 (45-146)||(14138837-14138938)
chr5 (45-146)||(37321587-37321688)
chr5 (45-145)||(6043307-6043407)
chr5 (45-144)||(3362949-3363048)
chr5 (45-142)||(12850972-12851069)
chr5 (45-145)||(2477806-2477906)
chr5 (45-145)||(38899520-38899621)
chr5 (45-146)||(12614531-12614633)
chr5 (55-145)||(22912852-22912942)
chr5 (45-124)||(11360947-11361026)
chr5 (55-146)||(17545476-17545567)
chr5 (45-103)||(4433845-4433903)
chr5 (69-141)||(12614721-12614794)
chr5 (52-108)||(13664736-13664792)
chr5 (69-128)||(27482017-27482077)
chr5 (69-141)||(22913042-22913115)
chr5 (69-141)||(2477640-2477713)
chr5 (69-141)||(6043499-6043572)
chr5 (69-133)||(8145387-8145452)
chr5 (69-141)||(11361119-11361192)
chr5 (74-133)||(10458409-10458469)
chr5 (69-141)||(3362782-3362855)
chr5 (69-141)||(4433995-4434068)
chr5 (69-141)||(4892206-4892279)
chr5 (69-114)||(17545673-17545718)
chr5 (69-141)||(25398242-25398315)
chr5 (45-114)||(31640767-31640836)
chr5 (69-114)||(31640928-31640973)
chr5 (69-141)||(38899714-38899787)
chr5 (115-143)||(12614483-12614511)
chr5 (45-105)||(36880148-36880213)
[»] chr2 (34 HSPs)
chr2 (45-145)||(9293370-9293470)
chr2 (45-145)||(10662058-10662158)
chr2 (45-145)||(33380377-33380477)
chr2 (45-145)||(35160929-35161029)
chr2 (45-147)||(13355018-13355120)
chr2 (45-141)||(3989246-3989342)
chr2 (45-145)||(7475303-7475403)
chr2 (45-145)||(23267857-23267957)
chr2 (45-142)||(31174633-31174730)
chr2 (45-147)||(22592880-22592985)
chr2 (55-146)||(43331092-43331183)
chr2 (55-143)||(21393483-21393570)
chr2 (55-145)||(9723586-9723677)
chr2 (45-114)||(16767288-16767357)
chr2 (45-114)||(21936252-21936321)
chr2 (55-147)||(34320961-34321042)
chr2 (55-124)||(37335824-37335894)
chr2 (69-141)||(14941354-14941427)
chr2 (153-204)||(3205753-3205804)
chr2 (69-133)||(27847644-27847709)
chr2 (45-105)||(14941199-14941259)
chr2 (69-141)||(9293564-9293637)
chr2 (69-141)||(9723409-9723482)
chr2 (100-145)||(39819272-39819317)
chr2 (69-141)||(7475496-7475569)
chr2 (69-141)||(10661891-10661964)
chr2 (69-141)||(21936085-21936158)
chr2 (69-141)||(23268050-23268123)
chr2 (69-133)||(31174822-31174887)
chr2 (69-141)||(35160761-35160834)
chr2 (70-115)||(37335744-37335789)
chr2 (69-141)||(43330916-43330989)
chr2 (106-147)||(27847791-27847833)
chr2 (65-147)||(40262529-40262611)
[»] chr1 (37 HSPs)
chr1 (45-145)||(37821629-37821729)
chr1 (45-147)||(20304923-20305025)
chr1 (45-147)||(44094867-44094969)
chr1 (45-147)||(51737675-51737777)
chr1 (45-145)||(25973577-25973677)
chr1 (45-148)||(36966500-36966603)
chr1 (45-144)||(40215158-40215257)
chr1 (45-147)||(18404618-18404720)
chr1 (45-147)||(41876235-41876337)
chr1 (45-146)||(19015574-19015675)
chr1 (45-145)||(3559787-3559887)
chr1 (45-145)||(25463846-25463946)
chr1 (45-145)||(6883657-6883757)
chr1 (45-145)||(9910086-9910186)
chr1 (69-145)||(19722894-19722970)
chr1 (55-147)||(33786424-33786516)
chr1 (55-145)||(32000061-32000151)
chr1 (55-143)||(40273888-40273976)
chr1 (48-143)||(44690818-44690914)
chr1 (45-147)||(10167569-10167672)
chr1 (69-142)||(33786623-33786696)
chr1 (73-144)||(52064373-52064445)
chr1 (69-141)||(40273706-40273779)
chr1 (53-147)||(27523048-27523143)
chr1 (69-141)||(16045786-16045859)
chr1 (69-141)||(32000255-32000328)
chr1 (69-141)||(40214992-40215065)
chr1 (69-141)||(18404446-18404519)
chr1 (69-141)||(25463680-25463753)
chr1 (69-141)||(44094702-44094775)
chr1 (53-108)||(52329453-52329508)
chr1 (69-141)||(6883491-6883564)
chr1 (69-141)||(9910281-9910354)
chr1 (69-141)||(19015408-19015481)
chr1 (69-141)||(36966696-36966769)
chr1 (69-141)||(37821822-37821895)
chr1 (53-145)||(22157333-22157425)
[»] scaffold0228 (6 HSPs)
scaffold0228 (45-147)||(26106-26208)
scaffold0228 (45-147)||(16154-16256)
scaffold0228 (69-133)||(8414-8479)
scaffold0228 (45-78)||(8572-8605)
scaffold0228 (69-133)||(15996-16061)
scaffold0228 (69-133)||(25948-26013)
[»] chr7 (32 HSPs)
chr7 (45-146)||(35445567-35445668)
chr7 (45-146)||(45637881-45637982)
chr7 (45-145)||(24395141-24395241)
chr7 (45-148)||(3962148-3962251)
chr7 (48-147)||(15577640-15577739)
chr7 (45-145)||(34483008-34483108)
chr7 (45-147)||(15329444-15329546)
chr7 (45-146)||(42611981-42612082)
chr7 (45-146)||(48880721-48880822)
chr7 (45-145)||(30848739-30848839)
chr7 (45-143)||(4974532-4974630)
chr7 (45-145)||(35876414-35876514)
chr7 (61-145)||(25167651-25167735)
chr7 (45-136)||(29737314-29737406)
chr7 (55-144)||(37476876-37476965)
chr7 (55-146)||(15238564-15238655)
chr7 (53-155)||(42696261-42696364)
chr7 (55-147)||(18037157-18037249)
chr7 (48-143)||(20009895-20009991)
chr7 (69-141)||(15329277-15329350)
chr7 (81-145)||(36790271-36790336)
chr7 (69-141)||(48880915-48880988)
chr7 (69-141)||(4974723-4974796)
chr7 (69-141)||(42611815-42611888)
chr7 (69-141)||(45637716-45637789)
chr7 (72-141)||(15577841-15577911)
chr7 (79-145)||(40880641-40880706)
chr7 (69-141)||(3961983-3962056)
chr7 (69-141)||(34482839-34482912)
chr7 (69-114)||(15238414-15238459)
chr7 (69-141)||(24394976-24395049)
chr7 (69-141)||(35444562-35444635)
[»] scaffold0085 (2 HSPs)
scaffold0085 (45-145)||(48019-48119)
scaffold0085 (69-141)||(47854-47927)
[»] scaffold0471 (2 HSPs)
scaffold0471 (45-143)||(13012-13110)
scaffold0471 (69-141)||(12846-12919)
[»] scaffold0204 (2 HSPs)
scaffold0204 (45-145)||(4566-4666)
scaffold0204 (69-141)||(4400-4473)
[»] scaffold0178 (2 HSPs)
scaffold0178 (45-145)||(11791-11891)
scaffold0178 (69-141)||(11625-11698)
[»] scaffold0096 (2 HSPs)
scaffold0096 (45-145)||(41180-41280)
scaffold0096 (69-141)||(41015-41088)
[»] scaffold0041 (1 HSPs)
scaffold0041 (79-145)||(85577-85642)
[»] scaffold0665 (1 HSPs)
scaffold0665 (69-141)||(3072-3145)


Alignment Details
Target: chr6 (Bit Score: 99; Significance: 5e-49; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 28675318 - 28675424
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 28675417  T
Q  145 cttcaaa 151  Q
    |||||||    
T  28675418 cttcaaa 28675424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 32702375 - 32702478
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 32702474  T
Q  145 cttc 148  Q
    ||||    
T  32702475 cttc 32702478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 33696867 - 33696969
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 33696966  T
Q  145 ctt 147  Q
    |||    
T  33696967 ctt 33696969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 17175916 - 17175816
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17175916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17175817  T
Q  145 c 145  Q
    |    
T  17175816 c 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 17705363 - 17705262
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17705363 atgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17705265  T
Q  145 ctt 147  Q
    |||    
T  17705264 ctt 17705262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 18365469 - 18365369
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18365469 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18365370  T
Q  145 c 145  Q
    |    
T  18365369 c 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 18370733 - 18370633
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18370733 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18370634  T
Q  145 c 145  Q
    |    
T  18370633 c 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 23290976 - 23290874
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T
Q  145 ctt 147  Q
    |||    
T  23290876 ctt 23290874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 33695221 - 33695121
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33695221 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttc 33695122  T
Q  145 c 145  Q
    |    
T  33695121 c 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 2309318 - 2309218
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttc 2309219  T
Q  145 c 145  Q
    |    
T  2309218 c 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 6031632 - 6031537
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||| || |||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 11548474 - 11548370
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttcaaacaa 154  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||   |||||||||||||||||||||||||| ||| ||| ||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttttcttaaaaaaa 11548375  T
Q  155 atatt 159  Q
    |||||    
T  11548374 atatt 11548370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 29693615 - 29693718
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  144 cctt 147  Q
    ||||    
T  29693715 cctt 29693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 18889539 - 18889470
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  18889539 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 6127447 - 6127506
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttg 104  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  ||| || |||||||| |||||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  67 tgaaatctaaaggtgattattgtgtc-atgtcattcttgaatctttctta-taaaatcattcttgatatctagcattttcc 145  Q
    |||||||||| |||||||||| || | || |||||||| ||| ||||||| ||||||||||||||||||||| ||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 2121058 - 2121004
Alignment:
Q  92 catgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 145  Q
    |||||||||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  2121058 catgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| ||||||||||  | |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 8515723 - 8515786
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    ||||||||| || |||||||||||| ||||| |||| |||||||| |||||||||| |||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 11548576 - 11548647
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagca 139  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||  |||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 25986997 - 25986934
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    ||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 18365561 - 18365634
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttg-aatctttcttataaaatcattcttgatatctagcatt 141  Q
    |||| ||| |||||||||| || ||||||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 18370825 - 18370898
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttg-aatctttcttataaaatcattcttgatatctagcatt 141  Q
    |||| ||| |||||||||| || ||||||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 9752141 - 9752109
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaa 77  Q
    ||||||| |||||||||||||||||||||||||    
T  9752141 atgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatt 141  Q
    |||||||| ||| |||||| || |||||||||||||||  ||||||   ||||| |||||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 21802215 - 21802114
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T
Q  145 ct 146  Q
    ||    
T  21802115 ct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 22199429 - 22199531
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 22199528  T
Q  145 ctt 147  Q
    |||    
T  22199529 ctt 22199531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 46442014 - 46442116
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46442014 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 46442113  T
Q  145 ctt 147  Q
    |||    
T  46442114 ctt 46442116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 36073519 - 36073619
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36073519 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 36073618  T
Q  145 c 145  Q
    |    
T  36073619 c 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 53123201 - 53123303
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53123201 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 53123300  T
Q  145 ctt 147  Q
    |||    
T  53123301 ctt 53123303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 10442682 - 10442581
Alignment:
Q  46 tgaaagattaa-taaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T
Q  145 ct 146  Q
    ||    
T  10442582 ct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 44893108 - 44893007
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  44893108 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893009  T
Q  145 ct 146  Q
    ||    
T  44893008 ct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 44893596 - 44893696
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  44893596 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893695  T
Q  145 c 145  Q
    |    
T  44893696 c 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 2625007 - 2625109
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  2625007 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttc 2625106  T
Q  145 ctt 147  Q
    |||    
T  2625107 ctt 2625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 9089040 - 9089138
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9089040 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 24128409 - 24128507
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  24128409 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 36073121 - 36073223
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttc 36073220  T
Q  145 ctt 147  Q
    |||    
T  36073221 ctt 36073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 47290236 - 47290338
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47290236 atgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 47290335  T
Q  145 ctt 147  Q
    |||    
T  47290336 ctt 47290338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 49387782 - 49387680
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttc 49387683  T
Q  145 ctt 147  Q
    |||    
T  49387682 ctt 49387680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  145 c 145  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 4751617 - 4751719
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  4751617 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttc 4751716  T
Q  145 ctt 147  Q
    |||    
T  4751717 ctt 4751719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 31078714 - 31078612
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  31078714 atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttc 31078615  T
Q  145 ctt 147  Q
    |||    
T  31078614 ctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 7745007 - 7744906
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7745007 atgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 7744908  T
Q  145 ct 146  Q
    ||    
T  7744907 ct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 50156473 - 50156373
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  50156473 atgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 50156375  T
Q  145 ct 146  Q
    ||    
T  50156374 ct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatct 135  Q
    ||||||||||||||||||||| |||||||||||| |||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 11314144 - 11314043
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 146  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T
Q  147 tc 148  Q
    ||    
T  11314044 tc 11314043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 37219801 - 37219904
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| || |||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  144 cctt 147  Q
    ||||    
T  37219901 cctt 37219904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  47 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 145  Q
    ||||| |||| |||||||||| ||||||||   |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 37934837 - 37934735
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||| || | ||||||| ||||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacatttt 37934738  T
Q  144 cct 146  Q
    |||    
T  37934737 cct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 30563379 - 30563448
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    ||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  30563379 atgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||||||||||| | |||||||||||  ||||||||||| ||| ||||||   ||||||||||||||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 145  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 44744610 - 44744698
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||| |||||||||||||| | | ||||||| ||||||||||||||||||||   | ||||||||||| |||||||||| |||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||| |||||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 145  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| |||||||||| ||||||||||| ||  |||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgata 132  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  |||||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| | |||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 24392744 - 24392671
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||| ||| |||||||||| || |||||||||||||||| |||||| | |||||| |||||||||| |||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||| ||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 53123108 - 53123034
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt--ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  ||||||  | |||||| |||||||||| |||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 4751523 - 4751450
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||| ||||| || ||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| | |||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 36073427 - 36073354
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||| ||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 44893503 - 44893430
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttg-aatctttcttataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||||||||||||| ||| ||| | | |||||| |||||||||| |||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 19650795 - 19650690
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19650795 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 19650696  T
Q  145 cttcaa 150  Q
    | ||||    
T  19650695 catcaa 19650690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 3137309 - 3137207
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3137309 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 3137210  T
Q  145 ctt 147  Q
    |||    
T  3137209 ctt 3137207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 3456234 - 3456336
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3456234 atgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 3456333  T
Q  145 ctt 147  Q
    |||    
T  3456334 ctt 3456336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 22426240 - 22426138
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22426240 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 22426141  T
Q  145 ctt 147  Q
    |||    
T  22426140 ctt 22426138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 33113964 - 33114066
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33113964 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 33114063  T
Q  145 ctt 147  Q
    |||    
T  33114064 ctt 33114066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 34482783 - 34482681
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  145 ctt 147  Q
    |||    
T  34482683 ctt 34482681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 37216948 - 37216846
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37216849  T
Q  145 ctt 147  Q
    |||    
T  37216848 ctt 37216846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 3574421 - 3574321
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3574421 atgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 3574322  T
Q  145 c 145  Q
    |    
T  3574321 c 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 30385570 - 30385670
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30385570 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttc 30385669  T
Q  145 c 145  Q
    |    
T  30385670 c 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 6042047 - 6042149
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  145 ctt 147  Q
    |||    
T  6042147 ctt 6042149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 48161076 - 48161182
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T
Q  145 cttcaaa 151  Q
    |||||||    
T  48161176 cttcaaa 48161182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 3089589 - 3089689
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T
Q  145 c 145  Q
    |    
T  3089689 c 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 2754889 - 2754989
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T
Q  145 c 145  Q
    |    
T  2754989 c 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 37522223 - 37522323
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 37522322  T
Q  145 c 145  Q
    |    
T  37522323 c 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 36864920 - 36864825
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 147  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcctt 36864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 40328011 - 40328104
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 147  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcctt 40328104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  144 cc 145  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 8361924 - 8361832
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcctt 8361832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  144 cc 145  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  46 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 144  Q
    |||||| ||||||||| |||||||||||||| |||||||||  | ||||||||||||||||||||| || |||||||||||||||||||||| |||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  145 c 145  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 41224414 - 41224505
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 146  Q
    ||||||||||| |||||| ||| ||||||||||||| |||||||||||||||| ||||||   |||||||||||||||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| || ||||||||| |||||||||| || |||||||||||||||||||||| ||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  144 c 144  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 42298032 - 42298122
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||          ||||||||||||||||||| ||||||||||    
T  42298032 atgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttg----------ataaaatcattcttgatatttagcattttc 42298121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 41883106 - 41883031
Alignment:
Q  56 ataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttga 130  Q
    |||||| ||||||||||| |||| |||||||| |  ||||||||||||||||||||||| ||||||||||| ||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    ||||||||||||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||||||| |||||| || ||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 33145789 - 33145717
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  ||| | |||||||| |||||||||| |||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 11347345 - 11347272
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| ||| |||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 11347439 - 11347476
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtga 82  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11347439 atgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 37217041 - 37217114
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||| ||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 8e-48; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 6108128 - 6108028
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6108128 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6108029  T
Q  145 c 145  Q
    |    
T  6108028 c 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 26042008 - 26041907
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26042008 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26041909  T
Q  145 ct 146  Q
    ||    
T  26041908 ct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 32064916 - 32065017
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 32065015  T
Q  145 ct 146  Q
    ||    
T  32065016 ct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 37985951 - 37985850
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37985951 atgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37985852  T
Q  145 ct 146  Q
    ||    
T  37985851 ct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 40780024 - 40779923
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40780024 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 40779925  T
Q  145 ct 146  Q
    ||    
T  40779924 ct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  145 c 145  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 17841745 - 17841645
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17841745 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 17841646  T
Q  145 c 145  Q
    |    
T  17841645 c 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 25581134 - 25581034
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25581134 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25581035  T
Q  145 c 145  Q
    |    
T  25581034 c 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 1645859 - 1645757
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttc 1645760  T
Q  145 ctt 147  Q
    |||    
T  1645759 ctt 1645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 15187730 - 15187831
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15187829  T
Q  145 ct 146  Q
    ||    
T  15187830 ct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  51 gattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 20091696 - 20091598
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20091696 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 34665551 - 34665649
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 38017103 - 38017201
Alignment:
Q  46 tgaaagattaataaatgagactgaaatctaaaggtga-ttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38017103 tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 3596936 - 3596836
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  3596936 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3596837  T
Q  145 c 145  Q
    |    
T  3596836 c 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 30055686 - 30055786
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 30055785  T
Q  145 c 145  Q
    |    
T  30055786 c 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 42754937 - 42754837
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 42754838  T
Q  145 c 145  Q
    |    
T  42754837 c 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 39772697 - 39772608
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatc 134  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 31347659 - 31347569
Alignment:
Q  57 taaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctt 31347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  46 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 32394027 - 32394114
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatat 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 35353211 - 35353299
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatat 133  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  35353211 atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 8454003 - 8454078
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  8454003 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 7022159 - 7022251
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    |||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcctt 7022251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 142  Q
    ||||||||| ||| | |||||||| |||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 30834931 - 30834849
Alignment:
Q  65 actgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 146  Q
    |||||||||||| |||| ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 7017743 - 7017651
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcctt 7017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 24844756 - 24844655
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    ||||||| ||||||| | ||| | ||||||||  ||||||||| || |||| ||||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T
Q  144 cc 145  Q
    ||    
T  24844656 cc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 142  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||  |||||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 27782105 - 27782178
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||||||||| ||||||||||||| |||||||  |||||||||| |||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 15972865 - 15972910
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttctt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  |||||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 27835345 - 27835288
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 105  Q
    |||| ||||||||||||| |||||||||| | ||||||||||||||| ||||| ||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 31347770 - 31347843
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||  |||||||||| |||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 25581227 - 25581299
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 140  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||  ||||| | |||||||||| ||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 1886633 - 1886672
Alignment:
Q  95 gtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  1886633 gtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 7017853 - 7017926
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| | |||||||| || |||||||||||||||| |||||| | |||||| ||| |||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcatt 7017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| || ||| |||||||||||| |||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 14128941 - 14128868
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  ||| || |||||||| |||||||||| |||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| ||| |||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 32393935 - 32393862
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||| ||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 35353118 - 35353045
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 37986043 - 37986116
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattctt-gaatctttcttataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||||||||||||  ||| ||| | |||||||| |||||||||| |||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatat 133  Q
    ||||| || |||||||||| || |||||||||||||||| |||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  78 ggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 8e-48; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 8145543 - 8145643
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 8145642  T
Q  145 c 145  Q
    |    
T  8145643 c 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 4892372 - 4892473
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4892372 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 4892471  T
Q  145 ct 146  Q
    ||    
T  4892472 ct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 33584224 - 33584124
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33584224 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33584125  T
Q  145 c 145  Q
    |    
T  33584124 c 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 25398408 - 25398510
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  25398408 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttc 25398507  T
Q  145 ctt 147  Q
    |||    
T  25398508 ctt 25398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 3521902 - 3521801
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  3521902 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3521803  T
Q  145 ct 146  Q
    ||    
T  3521802 ct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 14138837 - 14138938
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14138837 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 14138936  T
Q  145 ct 146  Q
    ||    
T  14138937 ct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 37321688 - 37321587
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37321688 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttc 37321589  T
Q  145 ct 146  Q
    ||    
T  37321588 ct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 6043407 - 6043307
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  6043407 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 6043308  T
Q  145 c 145  Q
    |    
T  6043307 c 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 3362949 - 3363048
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  3362949 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 12850972 - 12851069
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 142  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 2477806 - 2477906
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  2477806 atgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 2477905  T
Q  145 c 145  Q
    |    
T  2477906 c 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 38899621 - 38899520
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa-tctttcttataaaatcattcttgatatctagcatttt 143  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  38899621 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatttt 38899522  T
Q  144 cc 145  Q
    ||    
T  38899521 cc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||||||| ||||||||||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  144 cct 146  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 11361026 - 11360947
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcat 124  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  11361026 atgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 146  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||| ||   |||||||||||||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 4433903 - 4433845
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattctt 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  4433903 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||  |||||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  52 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatc 108  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 27482017 - 27482077
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattctt 128  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| |||||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| |  |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  74 taaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||||||||| || |||||||||||||||| |||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 3362855 - 3362782
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||| ||||| || ||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 4433995 - 4434068
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 4892279 - 4892206
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 25398315 - 25398242
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 31640836 - 31640767
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    ||||||| ||||||||| |||    |||||||||  ||||||| || |||||||||||||||||||||||    
T  31640836 atgaaaggttaataaataagatatcaatctaaagtcgattattctgccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||| ||||| || |||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 38899714 - 38899787
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||| ||||| || ||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 12614483 - 12614511
Alignment:
Q  115 ataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||    
T  12614483 ataaaatcattcttgatatctagcatttt 12614511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 36880213 - 36880148
Alignment:
Q  45 atgaaagattaataaatgagactgaaa-tctaaaggtgattat----tgtgtcatgtcattcttga 105  Q
    ||||||| |||||| |||||||||||| ||||| |||||||||    |||||||||||||||||||    
T  36880213 atgaaaggttaatagatgagactgaaaatctaagggtgattatatattgtgtcatgtcattcttga 36880148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 9293470 - 9293370
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9293470 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 9293371  T
Q  145 c 145  Q
    |    
T  9293370 c 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 10662058 - 10662158
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 10662157  T
Q  145 c 145  Q
    |    
T  10662158 c 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 33380377 - 33380477
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33380377 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33380476  T
Q  145 c 145  Q
    |    
T  33380477 c 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 35160929 - 35161029
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35161028  T
Q  145 c 145  Q
    |    
T  35161029 c 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 13355018 - 13355120
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 13355117  T
Q  145 ctt 147  Q
    |||    
T  13355118 ctt 13355120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 3989246 - 3989342
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatt 141  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3989246 atgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 7475403 - 7475303
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7475403 atgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 7475304  T
Q  145 c 145  Q
    |    
T  7475303 c 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 23267957 - 23267857
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  23267957 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 23267858  T
Q  145 c 145  Q
    |    
T  23267857 c 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 31174730 - 31174633
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 142  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31174730 atgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 22592880 - 22592985
Alignment:
Q  45 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  142 ttcctt 147  Q
    ||||||    
T  22592980 ttcctt 22592985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 146  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 145  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||| || ||||||||||||||||||| ||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 21936252 - 21936321
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  21936252 atgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 34321042 - 34320961
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||           |||||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttga-----------aaaatcattcttgatatctagcattttcctt 34320961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcat 124  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 3205804 - 3205753
Alignment:
Q  153 aaatatttttggattcagttttgtatgaaaacaagtgatgttggattctgat 204  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  3205804 aaatatttttggattcagttttatatgaaaacaagtgttgttggattctgat 3205753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 105  Q
    ||||||| ||||||||| ||| |||||||||| | ||||||||||||||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 9723482 - 9723409
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||||| |||||||| ||||| |||| |||||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  100 tcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| | ||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  70 aatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 115  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| ||| || | |||||| |||||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 27847791 - 27847833
Alignment:
Q  106 atctttctt-ataaaatcattcttgatatctagcattttcctt 147  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  27847791 atctttcttgataaaattattcttgatatctagcattttcctt 27847833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 40262611 - 40262529
Alignment:
Q  65 actgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    ||||||||||||  || |||||| |  |||||||||||||||||  || |  |||  ||||||||||||||||||||||||||    
T  40262611 actgaaatctaagagttattattctaccatgtcattcttgaatccatcgtgaaaatccattcttgatatctagcattttcctt 40262529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 37821729 - 37821629
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37821729 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 37821630  T
Q  145 c 145  Q
    |    
T  37821629 c 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 20305025 - 20304923
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T
Q  145 ctt 147  Q
    |||    
T  20304925 ctt 20304923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 44094867 - 44094969
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  44094867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttc 44094966  T
Q  145 ctt 147  Q
    |||    
T  44094967 ctt 44094969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 51737675 - 51737777
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51737675 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 51737774  T
Q  145 ctt 147  Q
    |||    
T  51737775 ctt 51737777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 25973577 - 25973677
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25973577 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25973676  T
Q  145 c 145  Q
    |    
T  25973677 c 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 36966603 - 36966500
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  36966603 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttc 36966504  T
Q  145 cttc 148  Q
    ||||    
T  36966503 cttc 36966500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 40215158 - 40215257
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40215158 atgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 18404618 - 18404720
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  145 ctt 147  Q
    |||    
T  18404718 ctt 18404720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 41876337 - 41876235
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41876337 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 41876238  T
Q  145 ctt 147  Q
    |||    
T  41876237 ctt 41876235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 19015574 - 19015675
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  19015574 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttc 19015673  T
Q  145 ct 146  Q
    ||    
T  19015674 ct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T
Q  145 c 145  Q
    |    
T  3559887 c 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 25463846 - 25463946
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25463846 atgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 25463945  T
Q  145 c 145  Q
    |    
T  25463946 c 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 6883657 - 6883757
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6883657 atgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6883756  T
Q  145 c 145  Q
    |    
T  6883757 c 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 9910186 - 9910086
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 9910087  T
Q  145 c 145  Q
    |    
T  9910086 c 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 33786516 - 33786424
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctt 33786424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 44690914 - 44690818
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||| |||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 10167569 - 10167672
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaat-ctttcttataaaatcattcttgatatctagcatttt 143  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| |||| | |||||| |||  ||| |||||||||||||||| |||| || ||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  144 cctt 147  Q
    ||||    
T  10167669 cctt 10167672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 142  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  73 ctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 144  Q
    |||| ||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 27523143 - 27523048
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 147  Q
    ||||||||| ||||| ||||| || |||||||| | || |||   ||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  27523143 ttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcctt 27523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||| ||||| ||||||||||||||||||| |||||| | |||||| |||||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    ||||||||||||||||||| |  |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 25463753 - 25463680
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  |||||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 52329453 - 52329508
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatc 108  Q
    ||||||| | |||||||||||||| |||||||||| ||  ||||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 6883564 - 6883491
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| | |||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 22157425 - 22157333
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    ||||||||| ||| |||||| |||  ||||||||| |  |||||||||||| ||||  || ||  || ||||| |||||||||||||||||||    
T  22157425 ttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatcataagaattcatttttgatatctagcattttcc 22157333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 95; Significance: 1e-46; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 26106 - 26208
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26106 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26205  T
Q  145 ctt 147  Q
    |||    
T  26206 ctt 26208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 16154 - 16256
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16154 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 16253  T
Q  145 ctt 147  Q
    |||    
T  16254 ctt 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 8572 - 8605
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaag 78  Q
    ||||||||||||||||||||||||||||||||||    
T  8572 atgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  145 ct 146  Q
    ||    
T  35445667 ct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 45637881 - 45637982
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45637881 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 45637980  T
Q  145 ct 146  Q
    ||    
T  45637981 ct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 24395141 - 24395241
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24395141 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttc 24395240  T
Q  145 c 145  Q
    |    
T  24395241 c 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 3962148 - 3962251
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  3962148 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttc 3962247  T
Q  145 cttc 148  Q
    ||||    
T  3962248 cttc 3962251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 15577739 - 15577640
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctt 15577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  145 c 145  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 15329444 - 15329546
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  145 ctt 147  Q
    |||    
T  15329544 ctt 15329546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 42611981 - 42612082
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  42611981 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 42612080  T
Q  145 ct 146  Q
    ||    
T  42612081 ct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 48880822 - 48880721
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48880822 atgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 48880723  T
Q  145 ct 146  Q
    ||    
T  48880722 ct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 30848739 - 30848839
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttc 30848838  T
Q  145 c 145  Q
    |    
T  30848839 c 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 4974630 - 4974532
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  || ||||||||||||||||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  145 c 145  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  61 tgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 136  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||   |||||||||||||||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 146  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||| ||   |||||||||||||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 155
Target Start/End: Original strand, 42696261 - 42696364
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttcaaa 151  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||| || ||||||||||| |||||||||| |||||||||  |||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcctaaaaa 42696360  T
Q  152 caaa 155  Q
    ||||    
T  42696361 caaa 42696364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 18037157 - 18037249
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 147  Q
    |||||||| ||||||||||||| ||||||||||||  |||||||||||| ||||||||||   |||||||| |||||||||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcctt 18037249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 143  Q
    |||| ||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  81 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 145  Q
    ||||||||||||||||||||||||||||||| || |||||| |||| ||||||| |||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 15577841 - 15577911
Alignment:
Q  72 tctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    ||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    |||||||||||| ||||| ||| || ||||||||  || ||||||||||||||||||||||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 3962056 - 3961983
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||| ||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 34482912 - 34482839
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 24395049 - 24394976
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    ||||||||||||  ||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  24395049 aaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 24394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 35444635 - 35444562
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 48019 - 48119
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48019 atgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 48118  T
Q  145 c 145  Q
    |    
T  48119 c 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 13012 - 13110
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  13012 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| | |||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 4566 - 4666
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4566 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 4665  T
Q  145 c 145  Q
    |    
T  4666 c 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 4473 - 4400
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 11791 - 11891
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 11890  T
Q  145 c 145  Q
    |    
T  11891 c 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 41180 - 41280
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41180 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 41279  T
Q  145 c 145  Q
    |    
T  41280 c 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttg-aatctttcttataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || ||||||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 145  Q
    |||||||||||| ||||| ||| || ||||||||  || ||||||||||||||||||||||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 3145 - 3072
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  ||| || |||||||| |||||||||| |||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

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