View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2336_high_41 (Length: 251)
Name: NF2336_high_41
Description: NF2336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2336_high_41 |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 26956352 - 26956580
Alignment:
| Q |
10 |
ataattcttgcagctattaccatatttcccttcagtttggtaaagaatttgtgaaaacaaaac-atgtaactttgtcaactatatagtactgtatatgtg |
108 |
Q |
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| T |
26956352 |
ataattcttgcagctattaccatatttcccttcagtttggtaaagaatttgtgtaaacaaaaagatgtaactttgtcaactatatagtactatatatgtg |
26956451 |
T |
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| Q |
109 |
tctatcctctcaccaatgagttcttaactacatagtactatatatttgccaatcctttttgttgttccataatcaacaagggagcactatctgaatg--- |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26956452 |
tctatcctctcaccaatgagttcttaactacatagtactatatatttgccaatcctttttgttgttccataatcaacaagggagcactatctgaatgtat |
26956551 |
T |
|
| Q |
206 |
gatatatgacatcattcctaatgcaatat |
234 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
26956552 |
aatatatgacatcattcctaatgcaatat |
26956580 |
T |
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