View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2336_high_49 (Length: 247)

Name: NF2336_high_49
Description: NF2336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2336_high_49
NF2336_high_49
[»] chr8 (4 HSPs)
chr8 (4-244)||(44517545-44517784)
chr8 (108-162)||(20169125-20169179)
chr8 (108-156)||(6148929-6148977)
chr8 (112-156)||(24557151-24557195)
[»] chr4 (10 HSPs)
chr4 (4-169)||(33841761-33841930)
chr4 (101-167)||(23474161-23474227)
chr4 (108-164)||(1871334-1871390)
chr4 (19-153)||(2275301-2275433)
chr4 (108-167)||(54997567-54997626)
chr4 (108-170)||(709985-710047)
chr4 (114-176)||(13493337-13493399)
chr4 (101-162)||(56453784-56453845)
chr4 (101-169)||(3326567-3326635)
chr4 (112-156)||(31726275-31726319)
[»] chr3 (14 HSPs)
chr3 (19-156)||(36354233-36354370)
chr3 (106-161)||(37323937-37323992)
chr3 (101-162)||(28229366-28229427)
chr3 (101-178)||(29586386-29586463)
chr3 (101-169)||(51982542-51982610)
chr3 (101-152)||(15004056-15004107)
chr3 (101-162)||(24754707-24754769)
chr3 (101-162)||(24763704-24763766)
chr3 (108-153)||(2630113-2630158)
chr3 (108-173)||(3009278-3009343)
chr3 (19-76)||(27033619-27033676)
chr3 (101-162)||(33979984-33980045)
chr3 (19-64)||(43092981-43093026)
chr3 (26-82)||(26181966-26182022)
[»] chr2 (12 HSPs)
chr2 (108-162)||(28853106-28853160)
chr2 (1-153)||(6591031-6591191)
chr2 (18-169)||(36758670-36758816)
chr2 (101-165)||(36929766-36929830)
chr2 (106-169)||(12949551-12949614)
chr2 (101-162)||(11864919-11864981)
chr2 (106-176)||(35315557-35315627)
chr2 (101-171)||(43077944-43078014)
chr2 (41-142)||(26613594-26613698)
chr2 (106-167)||(36758820-36758881)
chr2 (106-171)||(45446559-45446624)
chr2 (98-162)||(2522537-2522601)
[»] scaffold0252 (1 HSPs)
scaffold0252 (28-173)||(10427-10572)
[»] scaffold0007 (1 HSPs)
scaffold0007 (120-169)||(246299-246348)
[»] chr5 (9 HSPs)
chr5 (59-152)||(31546721-31546814)
chr5 (101-162)||(3440890-3440951)
chr5 (106-169)||(9460592-9460655)
chr5 (101-162)||(27428845-27428906)
chr5 (108-164)||(27721188-27721244)
chr5 (110-153)||(1422465-1422508)
chr5 (101-156)||(31156596-31156651)
chr5 (93-155)||(4592301-4592363)
chr5 (101-143)||(29341045-29341087)
[»] chr6 (4 HSPs)
chr6 (98-169)||(10203529-10203600)
chr6 (101-167)||(11180387-11180453)
chr6 (106-143)||(29229149-29229186)
chr6 (101-161)||(29818514-29818574)
[»] chr1 (8 HSPs)
chr1 (106-169)||(44239250-44239313)
chr1 (19-169)||(5803717-5803867)
chr1 (29-170)||(47296615-47296754)
chr1 (24-96)||(37336031-37336103)
chr1 (101-169)||(47296096-47296164)
chr1 (108-143)||(5854829-5854864)
chr1 (32-161)||(49384627-49384754)
chr1 (133-174)||(24339316-24339357)
[»] chr7 (9 HSPs)
chr7 (101-162)||(47271111-47271172)
chr7 (109-167)||(40143562-40143620)
chr7 (106-152)||(43183031-43183077)
chr7 (99-162)||(44390826-44390889)
chr7 (26-72)||(40019656-40019702)
chr7 (99-165)||(45582874-45582939)
chr7 (122-171)||(1193985-1194034)
chr7 (108-153)||(47270317-47270362)
chr7 (101-161)||(989179-989239)
[»] scaffold0126 (1 HSPs)
scaffold0126 (101-162)||(22406-22467)


Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 244
Target Start/End: Complemental strand, 44517784 - 44517545
Alignment:
Q  4 catttcctccatttggatatagacacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttactacattttt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||||||    
T  44517784 catttcctccatttggatatagacacaaaaaatcttgaaaagtgtatacaataattaatgattgtggaacccattttttgaaaacatt-actacattttt 44517686  T
Q  104 tgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactcgtttttaggagcttgtaacgtttcttataaacca 203  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44517685 tgtgtgcctatctctttccaaattatatactccatttattttgataaatggaggagatccttactcgtttttaggagcttgtaacgtttcttataaacca 44517586  T
Q  204 aaatttattcgagtttatagttatattactcctttgcttct 244  Q
    |||||||||||||||||| ||||||||||| ||||| ||||    
T  44517585 aaatttattcgagtttatggttatattacttctttggttct 44517545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 20169125 - 20169179
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    ||||||||||| ||||||||| ||  |||||||||||| |||||||||| |||||    
T  20169125 tgtctatctctctccaaattgcatcttccatttatttttataaatggagaggatc 20169179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 6148977 - 6148929
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatggag 156  Q
    |||||||||||||| |||||| ||  |||||||||||| ||||||||||    
T  6148977 tgtctatctctttctaaattgcatcttccatttatttttataaatggag 6148929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 24557195 - 24557151
Alignment:
Q  112 tatctctttccaaattgtatactccatttattttgataaatggag 156  Q
    ||||||||||||||||| ||  |||||||||||| ||||||||||    
T  24557195 tatctctttccaaattgcatcttccatttatttttataaatggag 24557151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 33841930 - 33841761
Alignment:
Q  4 catttcctccatttgga----tatagacacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttactacat 99  Q
    |||||||||||||||||    || |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | |||| |||| ||||       
T  33841930 catttcctccatttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatggtgggacccatttatcgaaaccattcactatta 33841831  T
Q  100 tttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
     |||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||| ||||||||||||    
T  33841830 attttttgtgtctatctctctccaaattgtatactccatttactttaacaaatggagaggatccttactc 33841761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 23474161 - 23474227
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttac 167  Q
    |||| |||||||||||||  |||||||| |||||||||||||| || ||||||||| ||||| ||||    
T  23474161 ttttatgtgtctatctctccccaaattgcatactccatttattatgctaaatggagaggatctttac 23474227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 1871334 - 1871390
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatggaggggatcct 164  Q
    ||||||||||| ||||||||| |||||||||||||||||  |||| ||| |||||||    
T  1871334 tgtctatctctctccaaattgcatactccatttattttgtcaaattgagaggatcct 1871390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 2275301 - 2275433
Alignment:
Q  19 gatatagacacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttactacattttttgtgtgtctatctct 118  Q
    |||| ||||| ||||||||||||||   ||||| |||||||||||  |||| || ||||||  || ||| ||||||||   ||||||||||| ||||||     
T  2275301 gataaagacataaaaaatcttgaaataagtataaaataattaatgcaggtgagaaccatttagtggaaatatttactattatttttgtgtgtatatctc- 2275399  T
Q  119 ttccaaattgtatactccatttattttgataaatg 153  Q
     || |||||||||| || ||||| |||||| ||||    
T  2275400 -tctaaattgtatattctatttaatttgatcaatg 2275433  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 54997626 - 54997567
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttac 167  Q
    ||||||||||||||||||||| |   |||||||||||| |||||||||| ||||| ||||    
T  54997626 tgtctatctctttccaaattgcaacttccatttatttttataaatggagaggatctttac 54997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 710047 - 709985
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactcg 170  Q
    |||||||||||||  ||||||||||||||||||| ||||| ||||| ||  |||| |||||||    
T  710047 tgtctatctctttttaaattgtatactccatttaatttgacaaatgaagatgatctttactcg 709985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 13493337 - 13493399
Alignment:
Q  114 tctctttccaaattgtatactccatttattttgataaatggaggggatccttactcgttttta 176  Q
    ||||| || |||||| |||||||||||||||||  |||| ||| |||||||||||| ||||||    
T  13493337 tctctctctaaattgcatactccatttattttgtcaaatagagaggatccttactcattttta 13493399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 56453845 - 56453784
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||| ||||||||||||| ||||||||| ||  |||||||||||  |||||||||| |||||    
T  56453845 ttttttgtgtctatctctctccaaattgcatcttccatttatttctataaatggagaggatc 56453784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 3326567 - 3326635
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    |||| ||||| ||| |||||| |||| |||| || | |||||||| |||||||||| ||||||||||||    
T  3326567 ttttttgtgtgtatttctttctaaatggtatccttcgtttattttcataaatggagaggatccttactc 3326635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 31726275 - 31726319
Alignment:
Q  112 tatctctttccaaattgtatactccatttattttgataaatggag 156  Q
    ||||||| ||||||||| |||||| ||||||||||| ||||||||    
T  31726275 tatctctctccaaattgcatactctatttattttgacaaatggag 31726319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 36354370 - 36354233
Alignment:
Q  19 gatatagacacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttactacattttttgtgtgtctatctct 118  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| |||||  ||||| |||||| |||  |||   | |||| |||||  ||||||    
T  36354370 gataaagacacaaaaaatcttgaaaatagtatacaataattaatgatgatgggactcatttattgaaagcatccactttctcttttttgtgttcatctct 36354271  T
Q  119 ttccaaattgtatactccatttattttgataaatggag 156  Q
     ||||||||||||| |||||||| ||| | ||||||||    
T  36354270 ctccaaattgtatattccatttactttaacaaatggag 36354233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 37323992 - 37323937
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggat 161  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||||    
T  37323992 tgtgtctatctctctccaaattgtatcctccatttattttgataaatagagaggat 37323937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 28229427 - 28229366
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||| ||||||||| ||||||| ||||| | |||||||||||||| |||||||||| |||||    
T  28229427 ttttttgtgtctatatctttcctaattgcacactccatttattttaataaatggagaggatc 28229366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 29586386 - 29586463
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactcgtttttagg 178  Q
    |||| ||||||||||||| |||||| || |||||||||||||| || |||||| || ||||| |||| |||| |||||    
T  29586386 ttttatgtgtctatctctctccaaactgcatactccatttattatgctaaatgaagaggatctttacccgttgttagg 29586463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 51982610 - 51982542
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    |||| ||| ||||||||| ||||||||| ||  |||||||||||| |||||||||| ||||| ||||||    
T  51982610 ttttatgtatctatctctctccaaattgcatcttccatttatttttataaatggagaggatctttactc 51982542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 15004107 - 15004056
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaat 152  Q
    |||| ||||||||| ||| | |||||||||| ||||||||||||||||||||    
T  15004107 ttttttgtgtctatttctcttcaaattgtatcctccatttattttgataaat 15004056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 24754707 - 24754769
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgt-atactccatttattttgataaatggaggggatc 162  Q
    |||||||||||||||||| ||||| |||| | |||||||||||||||  |||||||| |||||    
T  24754707 ttttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatc 24754769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 24763704 - 24763766
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgt-atactccatttattttgataaatggaggggatc 162  Q
    |||||||||||||||||| ||||| |||| | |||||||||||||||  |||||||| |||||    
T  24763704 ttttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatc 24763766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 2630113 - 2630158
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatg 153  Q
    |||||||||||||  | ||||||| |||||||||||||||||||||    
T  2630113 tgtctatctctttttagattgtatcctccatttattttgataaatg 2630158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 3009278 - 3009343
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactcgttt 173  Q
    ||||||||||| ||||||||| |   |||||||||||| |||||||||| ||||| |||| |||||    
T  3009278 tgtctatctctctccaaattgcaacttccatttatttttataaatggagaggatctttacccgttt 3009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 27033619 - 27033676
Alignment:
Q  19 gatatagacacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatcca 76  Q
    |||| ||||||| |||||||||||||  ||| |  |||||||||||||||||||||||    
T  27033619 gataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatcca 27033676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 33979984 - 33980045
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||| ||||||||||||||| | |||||||  ||||||||||||| |||||| ||| |||||    
T  33979984 ttttttgtgtctatctcttttctaattgtaatctccatttattttaataaatcgagaggatc 33980045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 43093026 - 43092981
Alignment:
Q  19 gatatagacacaaaaaatcttgaaaagtgtatacaataattaatga 64  Q
    |||| ||||||||||| | |||||||| ||||||||||||||||||    
T  43093026 gataaagacacaaaaatttttgaaaagagtatacaataattaatga 43092981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26181966 - 26182022
Alignment:
Q  26 acacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccatttttt 82  Q
    ||||||||||||||  |||  |||||||||||||||||||| || || |||||||||    
T  26181966 acacaaaaaatcttataaatagtatacaataattaatgatgatgtgacccatttttt 26182022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 28853106 - 28853160
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  28853106 tgtctatctctttccaaattgtatcctccatttattttgataaatggagaggatc 28853160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 6591191 - 6591031
Alignment:
Q  1 cttcatttcctccatttg----gatatagacacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttacta 96  Q
    ||||||||||||||||||     ||| ||||||||||||||||||||||  ||||||||| ||||||||||||||  |||||| ||||||  | ||||||    
T  6591191 cttcatttcctccatttgaaaatataaagacacaaaaaatcttgaaaagaatatacaatagttaatgatggtgggtcccatttattgaaagtaattacta 6591092  T
Q  97 -cattttttgtgtg--tctatct-ctttccaaattgtatactccatttattttgataaatg 153  Q
     | |||||||||||  || || |  ||||||||||||||||| |||||| ||||| |||||    
T  6591091 tctttttttgtgtgtatcaatttaatttccaaattgtatacttcatttactttgacaaatg 6591031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 36758816 - 36758670
Alignment:
Q  18 ggatatagacacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttactacattttttgtgtgtctatctc 117  Q
    ||||| |||||||| |||| ||||||| ||||||||| |||||||||||||| ||  ||||| ||| || |||| | |   |||||| | |||  |||||    
T  36758816 ggataaagacacaacaaattttgaaaattgtatacaacaattaatgatggtgaga--catttattggaagcattcatt---ttttttttttgttcatctc 36758722  T
Q  118 tttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    | ||||||||| |||||||||||| ||||| |||||||| ||||| ||||||    
T  36758721 tctccaaattgcatactccatttactttgacaaatggagaggatctttactc 36758670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 36929766 - 36929830
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatcctt 165  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||| | ||||||    
T  36929766 ttttatgtgtctatctctctccaaattgcatactccatttattttgctaaatggagagaatcctt 36929830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 12949551 - 12949614
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    ||||| |||||||||| |||| |||| ||||||||||||| |||||||||| ||||||||||||    
T  12949551 tgtgtgtatctctttctaaatggtatcctccatttatttttataaatggagaggatccttactc 12949614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 11864919 - 11864981
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtata-ctccatttattttgataaatggaggggatc 162  Q
    |||| ||||||||||||| ||||| ||||| | |||||||||||||||||||||||| |||||    
T  11864919 ttttttgtgtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatc 11864981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 35315557 - 35315627
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactcgttttta 176  Q
    ||||| ||||||| ||||||||| ||  |||||||||||| |||||||||| ||||| | || ||||||||    
T  35315557 tgtgtttatctctctccaaattgcatcttccatttatttttataaatggagaggatcttaacccgttttta 35315627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 43077944 - 43078014
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactcgt 171  Q
    |||| ||||||||||||| | |||||||||||||| ||||| ||||| ||||| || ||||| || |||||    
T  43077944 ttttttgtgtctatctctcttcaaattgtatactctatttactttgacaaatgaagaggatctttcctcgt 43078014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 26613698 - 26613594
Alignment:
Q  41 aaaagtgtatacaataattaatgatggtggga-tccattttttgaaaacatttacta--cattttttgtgtgtctatctctttccaaattgtatactcca 137  Q
    ||||| |||||||||||||||| |||| |||| ||  ||| |||||| |||||| ||    |||||| ||| ||||| ||| ||||||||||||||||||    
T  26613698 aaaagagtatacaataattaattatggcgggactcgttttattgaaagcatttattatcttttttttttgtatctatatctctccaaattgtatactcca 26613599  T
Q  138 tttat 142  Q
    |||||    
T  26613598 tttat 26613594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 36758881 - 36758820
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttac 167  Q
    ||||||||||||| ||||||||| |   |||||||||||| |||||||||| ||||| ||||    
T  36758881 tgtgtctatctctctccaaattgcaacttccatttatttttataaatggagaggatctttac 36758820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 45446624 - 45446559
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactcgt 171  Q
    ||||| |||||||||| |||| | |  ||||||||||||| |||||||||| ||||||| ||||||    
T  45446624 tgtgtgtatctctttctaaatggcaatctccatttatttttataaatggagaggatcctaactcgt 45446559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 2522537 - 2522601
Alignment:
Q  98 attttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    ||||||||||||| | |||||||| |||| | || ||||||||||||| ||||||| || |||||    
T  2522537 attttttgtgtgtatctctctttctaaatggcatgctccatttatttttataaatgaagaggatc 2522601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 10572 - 10427
Alignment:
Q  28 acaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttactacattttttgtgtgtctatctctttccaaatt 127  Q
    |||||||||||| ||||  ||||| | | ||||||||||||| |||||||||  | |||| ||| | ||  | |||| ||||| ||| |||||  |||||    
T  10572 acaaaaaatcttaaaaaaagtataaagttattaatgatggtgagatccatttaattaaaatattcattatctattttttgtgtttatttctttttaaatt 10473  T
Q  128 gtatactccatttattttgataaatggaggggatccttactcgttt 173  Q
    |||| |||||||||||||||||||||||| ||||| | ||||||||    
T  10472 gtattctccatttattttgataaatggagaggatcttaactcgttt 10427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 246299 - 246348
Alignment:
Q  120 tccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  246299 tccaaattgtatactccatttattttgataaatggagaggatccttactc 246348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 31546721 - 31546814
Alignment:
Q  59 taatgatggtgggatccattttttgaaaacatttactacattttttgtgtgtctatctctttccaaattgtatactccatttattttgataaat 152  Q
    |||||||||||||| ||||||  | |||| ||| ||||| | |||| | ||| ||||||| |||||||||||| ||||||||||||||||||||    
T  31546721 taatgatggtgggacccatttaattaaaatattcactacctcttttttatgtttatctctctccaaattgtatcctccatttattttgataaat 31546814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 3440890 - 3440951
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||| |||||    
T  3440890 ttttttgtgtctatctctttcctaattgtaatctccatttattttaataaatggagaggatc 3440951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 9460655 - 9460592
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    ||||||||||||| ||||||||| |||||| |||||||||   |||||||| ||||||||||||    
T  9460655 tgtgtctatctctctccaaattgcatactctatttattttaccaaatggagaggatccttactc 9460592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 27428906 - 27428845
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||| ||||||||||||||||||||||| ||  || ||||||||| |||||||||| |||||    
T  27428906 ttttttgtgtctatctctttccaaattgcatcttctatttatttttataaatggagaggatc 27428845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 27721188 - 27721244
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatggaggggatcct 164  Q
    |||||||||||||| |||||||||  |||||||||||| || ||||||| |||||||    
T  27721188 tgtctatctctttctaaattgtatcttccatttatttttattaatggagaggatcct 27721244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 1422508 - 1422465
Alignment:
Q  110 tctatctctttccaaattgtatactccatttattttgataaatg 153  Q
    |||||||||  |||||||| ||||||||||||||||||||||||    
T  1422508 tctatctctccccaaattgcatactccatttattttgataaatg 1422465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 31156596 - 31156651
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggag 156  Q
    |||| ||||||||||||||| ||||||| ||| | |||||||||| ||||||||||    
T  31156596 ttttttgtgtctatctcttttcaaattgcatatttcatttatttttataaatggag 31156651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 4592363 - 4592301
Alignment:
Q  93 actacattttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatgga 155  Q
    ||||||| |||| | | ||||||||| ||||||||||||| | |||||||||| |||||||||    
T  4592363 actacatattttatatctctatctctctccaaattgtatatttcatttatttttataaatgga 4592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 29341045 - 29341087
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttatt 143  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||    
T  29341045 ttttctgtgtctatctctctccaaattgcatactccatttatt 29341087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 10203600 - 10203529
Alignment:
Q  98 attttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    ||||| ||||||||||||| | ||||||||  |||||||||||||||||| ||||  |||||||||||||||    
T  10203600 attttgtgtgtgtctatctatctccaaattacatactccatttattttgacaaataaaggggatccttactc 10203529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 11180453 - 11180387
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttac 167  Q
    |||| ||||| ||||||||| ||||||||||  || |||| |||| |||||||||||||||| ||||    
T  11180453 ttttttgtgtttatctcttttcaaattgtatcttctatttctttttataaatggaggggatctttac 11180387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 29229149 - 29229186
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttatt 143  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  29229149 tgtgtctatctctctccaaattgcatactccatttatt 29229186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 29818574 - 29818514
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggat 161  Q
    |||| |||||||||||||||  |||||| |||| ||| |||||||| ||||||||| ||||    
T  29818574 ttttttgtgtctatctctttttaaattgcataccccaattattttgctaaatggagaggat 29818514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 44239250 - 44239313
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    ||||||||| ||| |||||||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  44239250 tgtgtctatttctctccaaattatatactccatttaatttgacaaatggagaggatccttactc 44239313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 5803867 - 5803717
Alignment:
Q  19 gatatagacacaaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttactacattttttgtgtgtctatctct 118  Q
    |||| |||||||||| ||||| ||||   |||| |||||||||||| |||| || ||||||  |  ||||||||| ||  | |||| ||| | |||||||    
T  5803867 gataaagacacaaaatatctttaaaaaaatataaaataattaatgaaggtgagacccatttaattgaaacatttagtatctcttttttgtatttatctct 5803768  T
Q  119 ttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
     ||||||||||| | ||||||||||||||| ||| ||| ||||| ||||||    
T  5803767 ctccaaattgtacattccatttattttgatgaatagagaggatctttactc 5803717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 47296754 - 47296615
Alignment:
Q  29 caaaaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttacta-cattttttgtgtgtctatctctttccaaatt 127  Q
    ||||||||||| |||| |||||| ||||||  |||  | ||||| ||||||  || || ||||||||| |||||||| |||||  |||||| || |||||    
T  47296754 caaaaaatctttaaaaatgtataaaataat--atgcagatgggacccatttaatggaagcatttactatcatttttt-tgtgtacatctctctctaaatt 47296658  T
Q  128 gtatactccatttattttgataaatggaggggatccttactcg 170  Q
    |||||||| ||||| ||||||||||| || ||||| |||||||    
T  47296657 gtatactctatttaatttgataaatgaagaggatctttactcg 47296615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 37336031 - 37336103
Alignment:
Q  24 agacacaaaaaatcttgaaaa-gtgtatacaataattaatgatggtgggatccattttttgaaaacatttacta 96  Q
    ||||| ||||||||||||||| | ||||||||| ||||||||||| || |||||||| ||||||||||| ||||    
T  37336031 agacaaaaaaaatcttgaaaaagagtatacaatgattaatgatgg-ggaatccatttcttgaaaacattcacta 37336103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 47296164 - 47296096
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttactc 169  Q
    |||| |||||| |||||| ||||||||||||||| |||||| ||| ||||||||||  |||| ||||||    
T  47296164 ttttttgtgtccatctctctccaaattgtatacttcatttaatttaataaatggagatgatctttactc 47296096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 143
Target Start/End: Complemental strand, 5854864 - 5854829
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttatt 143  Q
    ||||||||||||| ||||||||||||||||||||||    
T  5854864 tgtctatctcttttcaaattgtatactccatttatt 5854829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 49384754 - 49384627
Alignment:
Q  32 aaaatcttgaaaagtgtatacaataattaatgatggtgggatccattttttgaaaacatttactacattttttgtgtgtctatctctttccaaattgtat 131  Q
    |||||||||||||  ||||| | ||||||||||||| ||||  |||||  | |||| ||| ||||  | |||| |||  |||||||| || |||||||||    
T  49384754 aaaatcttgaaaaaagtataaagtaattaatgatggagggactcatttaattaaaatattcactatctcttttttgt--ctatctctctctaaattgtat 49384657  T
Q  132 actccatttattttgataaatggaggggat 161  Q
    | |||||||||||| | |||||||| ||||    
T  49384656 attccatttattttaacaaatggagaggat 49384627  T

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Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 24339357 - 24339316
Alignment:
Q  133 ctccatttattttgataaatggaggggatccttactcgtttt 174  Q
    ||||||||||||| |||||||||| |||||||||||| ||||    
T  24339357 ctccatttatttttataaatggagaggatccttactcatttt 24339316  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 47271172 - 47271111
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||| ||||||||||||| ||||||||| | ||||||||||||||| ||||||||| |||||    
T  47271172 ttttttgtgtctatctctctccaaattgcaaactccatttattttgctaaatggagaggatc 47271111  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 40143562 - 40143620
Alignment:
Q  109 gtctatctctttccaaattgtatactccatttattttgataaatggaggggatccttac 167  Q
    ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||| ||||    
T  40143562 gtctatctctttccaaattatatcttccatttatttttataaatggagaggatctttac 40143620  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 43183077 - 43183031
Alignment:
Q  106 tgtgtctatctctttccaaattgtatactccatttattttgataaat 152  Q
    |||||| |||||||||||||||| ||||||||||||||||| |||||    
T  43183077 tgtgtccatctctttccaaattgcatactccatttattttgttaaat 43183031  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 44390826 - 44390889
Alignment:
Q  99 ttttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||||| | ||||||||||| ||||||||| ||  |||||||||||| |||||||||| |||||    
T  44390826 ttttttttttgtctatctctctccaaattgcatcttccatttatttttataaatggagaggatc 44390889  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 40019656 - 40019702
Alignment:
Q  26 acacaaaaaatcttgaaaagtgtatacaataattaatgatggtggga 72  Q
    |||||||||||||||||||  ||||| | ||||||||||||||||||    
T  40019656 acacaaaaaatcttgaaaaaagtataaagtaattaatgatggtggga 40019702  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 45582874 - 45582939
Alignment:
Q  99 ttttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatcctt 165  Q
    |||||||||| || |||||| ||||||||||||||| |||||| |||||||||| ||| | ||||||    
T  45582874 ttttttgtgtttc-atctctctccaaattgtatacttcatttactttgataaatagagagaatcctt 45582939  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 1193985 - 1194034
Alignment:
Q  122 caaattgtatactccatttattttgataaatggaggggatccttactcgt 171  Q
    ||||||||||| |||||||| ||||| ||||| || ||||||||||||||    
T  1193985 caaattgtataatccatttactttgacaaatgaagaggatccttactcgt 1194034  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 47270362 - 47270317
Alignment:
Q  108 tgtctatctctttccaaattgtatactccatttattttgataaatg 153  Q
    ||||||||||||| ||||||||||||| ||||| |||| |||||||    
T  47270362 tgtctatctcttttcaaattgtatacttcattttttttaataaatg 47270317  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 989179 - 989239
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggat 161  Q
    |||| ||||||||||||| ||||||||| | |||||||||| ||||  |||||||| ||||    
T  989179 ttttttgtgtctatctctctccaaattgcaaactccatttaatttgtcaaatggagaggat 989239  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 22467 - 22406
Alignment:
Q  101 ttttgtgtgtctatctctttccaaattgtatactccatttattttgataaatggaggggatc 162  Q
    |||| |||||||||||||||  |||||| | ||||||||||||||| |||||| || |||||    
T  22467 ttttttgtgtctatctctttgtaaattgcaaactccatttattttgctaaatgcagaggatc 22406  T

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