View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2336_high_71 (Length: 212)
Name: NF2336_high_71
Description: NF2336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2336_high_71 |
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Alignment Details
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 9803120 - 9802934
Alignment:
| Q |
12 |
agaagcaaaggacgatgattgaagagacaacaatggtaaaacaaacatcataagtaaacaaagagtttaaacatatgaaacatgtttcaaacctttggga |
111 |
Q |
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| T |
9803120 |
agaaacaaaggacaatgattgaagagacaacaatggtaaaacaaacatcataagtaaacaaagagtttaaacatatgaaacatgtttcaaacctttggga |
9803021 |
T |
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| Q |
112 |
aaaactagga-----nnnnnnnnnnnnnngcaatgaaatgaaggtgtggagaatgaaaagagagaagaacggcgtttgcgcttttct |
193 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
9803020 |
aaaactaggatttttttttttttttttttgcaatgaaatgaaggtgtggagaatgaaaagaaagaagaacggcgtttgcgcttttct |
9802934 |
T |
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