View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2336_low_29 (Length: 311)
Name: NF2336_low_29
Description: NF2336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2336_low_29 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 7552507 - 7552804
Alignment:
| Q |
7 |
attctaaagacatctcttgaagaaaatgactatacaccaatctttcttttataactttgaaatttttgcaataaaagtcttaaccctaggtatagtggtg |
106 |
Q |
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| T |
7552507 |
attctgaagacatctcttgaagaaaatgactatgcaccaatctttcttttataactttgaaatttttacaataaaagtcttaaccctaggtatagtggcg |
7552606 |
T |
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| Q |
107 |
acacttcaaaggatttccaa---------gacatttgttacagagcctacttgtgccc-gtctaaaggtcattttgagtcctctctaccatcatctcaac |
196 |
Q |
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| T |
7552607 |
acacttcaaagagtttccaacatatccctgacatttgttacagagcctacttgtgccctgtctaaagaccattttgagtcctctctaccatcatctcaac |
7552706 |
T |
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| Q |
197 |
tttggcggtaaccaagggataaaattgtatcttacttattgtattcatcatagcccaattaacctccaaagtagcaaggatggtaaaaaggaattaaa |
294 |
Q |
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| T |
7552707 |
tttggcggtaaccaagggataaaattgtatcttacttatcgtattcatcatagcccaattaacctccaaattagcaaggatggtaaaaaggaattaaa |
7552804 |
T |
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