View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2336_low_5 (Length: 505)

Name: NF2336_low_5
Description: NF2336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2336_low_5
NF2336_low_5
[»] chr1 (25 HSPs)
chr1 (18-261)||(16976538-16976781)
chr1 (460-501)||(44738291-44738332)
chr1 (459-501)||(844974-845016)
chr1 (459-501)||(26118450-26118492)
chr1 (459-501)||(30105915-30105957)
chr1 (459-501)||(41972794-41972836)
chr1 (459-502)||(50540226-50540269)
chr1 (459-501)||(1351684-1351726)
chr1 (459-501)||(7183800-7183842)
chr1 (459-501)||(12890120-12890162)
chr1 (459-501)||(16386736-16386778)
chr1 (459-501)||(16451009-16451051)
chr1 (459-501)||(32270240-32270282)
chr1 (459-501)||(34663824-34663866)
chr1 (459-501)||(51703412-51703454)
chr1 (456-501)||(31004012-31004057)
chr1 (459-502)||(16437260-16437303)
chr1 (374-416)||(16976381-16976424)
chr1 (459-502)||(39281777-39281820)
chr1 (459-501)||(24339887-24339929)
chr1 (459-501)||(26765039-26765081)
chr1 (459-501)||(41968099-41968141)
chr1 (459-501)||(42510407-42510449)
chr1 (459-501)||(51264377-51264419)
chr1 (458-498)||(45491128-45491168)
[»] chr2 (21 HSPs)
chr2 (459-502)||(37004043-37004086)
chr2 (455-501)||(2085941-2085987)
chr2 (459-501)||(9717114-9717156)
chr2 (459-501)||(18685709-18685751)
chr2 (460-502)||(30798661-30798703)
chr2 (459-501)||(35114658-35114700)
chr2 (459-501)||(44284510-44284552)
chr2 (459-498)||(33366483-33366522)
chr2 (459-501)||(4641389-4641431)
chr2 (459-501)||(5279009-5279051)
chr2 (460-502)||(17540588-17540630)
chr2 (459-501)||(30326506-30326548)
chr2 (459-501)||(33889131-33889173)
chr2 (459-501)||(34338683-34338725)
chr2 (459-501)||(37308529-37308571)
chr2 (459-502)||(2645260-2645303)
chr2 (459-498)||(32497788-32497827)
chr2 (468-502)||(9733104-9733138)
chr2 (456-498)||(38993245-38993287)
chr2 (459-500)||(16178056-16178097)
chr2 (459-500)||(26418796-26418837)
[»] chr4 (26 HSPs)
chr4 (459-501)||(43640975-43641017)
chr4 (459-502)||(49152266-49152309)
chr4 (459-501)||(12600762-12600804)
chr4 (459-501)||(23521756-23521798)
chr4 (459-501)||(24002214-24002256)
chr4 (459-501)||(36885822-36885864)
chr4 (460-501)||(33552995-33553036)
chr4 (460-501)||(42869859-42869900)
chr4 (459-498)||(2725288-2725327)
chr4 (454-501)||(20802699-20802746)
chr4 (459-502)||(21579902-21579945)
chr4 (459-502)||(56154497-56154540)
chr4 (459-501)||(9512508-9512550)
chr4 (459-501)||(29616061-29616103)
chr4 (459-501)||(52319202-52319244)
chr4 (459-500)||(38486421-38486462)
chr4 (458-501)||(38812415-38812458)
chr4 (463-502)||(55065499-55065538)
chr4 (459-501)||(2786841-2786883)
chr4 (459-501)||(9807033-9807075)
chr4 (463-501)||(36497112-36497150)
chr4 (459-501)||(46680658-46680700)
chr4 (463-496)||(28115157-28115190)
chr4 (460-501)||(37931798-37931839)
chr4 (459-499)||(50728048-50728088)
chr4 (459-499)||(50736062-50736102)
[»] scaffold0208 (1 HSPs)
scaffold0208 (459-501)||(2519-2561)
[»] scaffold0098 (1 HSPs)
scaffold0098 (459-501)||(51312-51354)
[»] chr8 (23 HSPs)
chr8 (459-501)||(4052370-4052412)
chr8 (459-501)||(14005219-14005261)
chr8 (459-501)||(32020191-32020233)
chr8 (459-501)||(32303775-32303817)
chr8 (459-501)||(955126-955168)
chr8 (459-501)||(6386449-6386491)
chr8 (459-501)||(8673245-8673287)
chr8 (459-501)||(34063001-34063043)
chr8 (459-501)||(45446328-45446370)
chr8 (460-501)||(37664458-37664499)
chr8 (458-501)||(13407125-13407168)
chr8 (458-501)||(17805562-17805605)
chr8 (459-502)||(31731937-31731980)
chr8 (459-498)||(41709650-41709689)
chr8 (463-501)||(15001344-15001382)
chr8 (459-501)||(27103832-27103874)
chr8 (459-501)||(29563416-29563458)
chr8 (459-501)||(37861769-37861811)
chr8 (459-501)||(45113929-45113971)
chr8 (461-498)||(21272588-21272625)
chr8 (460-501)||(35225537-35225578)
chr8 (459-499)||(17520470-17520510)
chr8 (454-502)||(34101376-34101424)
[»] chr7 (25 HSPs)
chr7 (459-501)||(3922879-3922921)
chr7 (459-501)||(32873945-32873987)
chr7 (461-501)||(18470563-18470603)
chr7 (458-501)||(30849422-30849465)
chr7 (459-501)||(10932733-10932775)
chr7 (459-501)||(16962989-16963031)
chr7 (459-501)||(36769745-36769787)
chr7 (459-501)||(40753047-40753089)
chr7 (460-501)||(43158862-43158903)
chr7 (459-499)||(26994403-26994443)
chr7 (461-501)||(41211377-41211417)
chr7 (459-502)||(3892201-3892244)
chr7 (459-502)||(43189418-43189461)
chr7 (454-501)||(46408768-46408815)
chr7 (463-501)||(329352-329390)
chr7 (459-501)||(9913403-9913445)
chr7 (459-501)||(9927091-9927133)
chr7 (459-501)||(12982180-12982222)
chr7 (459-501)||(30599184-30599226)
chr7 (459-501)||(34117350-34117392)
chr7 (459-497)||(47316863-47316901)
chr7 (459-501)||(47947637-47947679)
chr7 (459-501)||(47953067-47953109)
chr7 (460-501)||(21784749-21784790)
chr7 (461-501)||(47442731-47442771)
[»] chr6 (16 HSPs)
chr6 (459-501)||(15277151-15277193)
chr6 (461-501)||(4494312-4494352)
chr6 (458-501)||(11279011-11279054)
chr6 (454-501)||(24203231-24203278)
chr6 (462-501)||(24242540-24242579)
chr6 (459-501)||(11613990-11614032)
chr6 (463-501)||(17867712-17867750)
chr6 (463-501)||(17877495-17877533)
chr6 (459-501)||(28502332-28502374)
chr6 (459-501)||(29814738-29814780)
chr6 (459-501)||(32805351-32805393)
chr6 (460-501)||(11212131-11212172)
chr6 (459-502)||(2614769-2614812)
chr6 (459-501)||(3259551-3259593)
chr6 (459-501)||(10959874-10959916)
chr6 (459-501)||(17443136-17443178)
[»] chr5 (17 HSPs)
chr5 (459-501)||(2351553-2351595)
chr5 (459-501)||(4818321-4818363)
chr5 (459-501)||(35701150-35701192)
chr5 (461-501)||(11963216-11963256)
chr5 (454-501)||(29241261-29241308)
chr5 (459-501)||(7208396-7208438)
chr5 (459-501)||(24181790-24181832)
chr5 (454-501)||(20119639-20119686)
chr5 (459-498)||(21739340-21739379)
chr5 (459-498)||(40182337-40182376)
chr5 (459-502)||(41790642-41790685)
chr5 (459-501)||(548221-548263)
chr5 (459-501)||(7523044-7523086)
chr5 (459-501)||(7725989-7726031)
chr5 (459-501)||(31880242-31880284)
chr5 (460-501)||(5673018-5673059)
chr5 (454-499)||(22432473-22432518)
[»] chr3 (20 HSPs)
chr3 (459-497)||(2134944-2134982)
chr3 (459-501)||(29584749-29584791)
chr3 (460-501)||(21221529-21221570)
chr3 (454-501)||(34026551-34026598)
chr3 (459-498)||(47958604-47958643)
chr3 (459-501)||(5442165-5442207)
chr3 (459-501)||(20254949-20254991)
chr3 (459-501)||(20609802-20609844)
chr3 (459-501)||(26282556-26282598)
chr3 (459-497)||(40083195-40083233)
chr3 (459-501)||(43175443-43175485)
chr3 (460-501)||(44116829-44116870)
chr3 (461-501)||(42636557-42636597)
chr3 (459-502)||(22484910-22484953)
chr3 (459-498)||(53557967-53558006)
chr3 (459-501)||(1344876-1344918)
chr3 (459-501)||(4851625-4851667)
chr3 (459-501)||(28675664-28675706)
chr3 (459-501)||(51259949-51259991)
chr3 (461-501)||(3864843-3864883)
[»] scaffold0014 (1 HSPs)
scaffold0014 (459-502)||(101822-101865)
[»] scaffold0169 (2 HSPs)
scaffold0169 (459-501)||(12717-12759)
scaffold0169 (459-501)||(18235-18277)
[»] scaffold0054 (1 HSPs)
scaffold0054 (459-501)||(23450-23492)
[»] scaffold0003 (1 HSPs)
scaffold0003 (459-501)||(338760-338802)
[»] scaffold0004 (1 HSPs)
scaffold0004 (460-501)||(373130-373171)
[»] scaffold0360 (1 HSPs)
scaffold0360 (459-501)||(15543-15585)
[»] scaffold0050 (1 HSPs)
scaffold0050 (463-501)||(43129-43167)
[»] scaffold0025 (1 HSPs)
scaffold0025 (463-501)||(5620-5658)
[»] scaffold0027 (1 HSPs)
scaffold0027 (461-501)||(15047-15087)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 16976781 - 16976538
Alignment:
Q  18 aaacggaaagtggggtggttggagaaagagagaaagatgaaaaattctgagaatgaagcgattggtaaggctatgaggagaagatagagatcaagatttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16976781 aaacggaaagtggggtggttggagaaagagagaaagatgaaaaattctgagaatgaagcgattggtaaggctatgaggagaagatagagatcaagatttt 16976682  T
Q  118 tccagtttgggtcggagagataccagagtttggatcggaagtgagaagggttgtggagatagagagaggaagatgagagtaaacgatggagaccaatggg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16976681 tccagtttgggtcggagagataccagagtttggatcggaagtgagaagggttgtggagatagagagaggaagatgagagtaaacgatggagaccaatggg 16976582  T
Q  218 aaagaagaagatgaaaccgcagaaatttgttgctaatgatgcca 261  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  16976581 gaagaagaagatgaaaccgcagaaatttgttgctaatgatgcca 16976538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 44738332 - 44738291
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44738332 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 44738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 845016 - 844974
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  845016 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 844974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 26118492 - 26118450
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  26118492 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 26118450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 30105957 - 30105915
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  30105957 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 30105915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 41972794 - 41972836
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  41972794 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 41972836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 50540226 - 50540269
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  50540226 gtgtgtttggtttgcaaaacagtaagtacttgacagaacagtat 50540269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 1351726 - 1351684
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  1351726 gtgtgtttggtttgcaaaacagtaagtacttgacagaacagta 1351684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 7183800 - 7183842
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  7183800 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 7183842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 12890120 - 12890162
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  12890120 gtgtgtttggtttgcaaaatagtaagtactagacagaacagta 12890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 16386736 - 16386778
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  16386736 gtgtgtttggtttgcaaaacagcaagtattggacagaacagta 16386778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 16451009 - 16451051
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  16451009 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 16451051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 32270240 - 32270282
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  32270240 gtgtgtttggtttgcaaaacagcaagtactggacaaaacagta 32270282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 34663824 - 34663866
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  34663824 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 34663866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 51703454 - 51703412
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  51703454 gtgtgtttggtttgcaaaacagcaagtactggacaaaacagta 51703412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 31004012 - 31004057
Alignment:
Q  456 tgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||    
T  31004012 tgtgtgcgtttggtttgcaaaacagcaagtactgtacagaacagta 31004057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 16437260 - 16437303
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  16437260 gtgtgtttggtttgtaaaacagcaaatactggacagaacagtat 16437303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 416
Target Start/End: Complemental strand, 16976424 - 16976381
Alignment:
Q  374 acaagaaatactttgtgacttt-aaatttaagtgattttggcga 416  Q
    |||||| ||||||||||||||| |||||||||||||||||||||    
T  16976424 acaagagatactttgtgacttttaaatttaagtgattttggcga 16976381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 39281777 - 39281820
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||    
T  39281777 gtgtgtttggtttgcaaaacagtaagtactggacagaatagtat 39281820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 24339929 - 24339887
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||    
T  24339929 gtgtgtttggtctgcaaaacagcaaatactggacagaacagta 24339887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 26765081 - 26765039
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||    
T  26765081 gtgtgtttgatttgcaaaacagtaagtactggacagaacagta 26765039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 41968141 - 41968099
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| |||| || ||||||||||||    
T  41968141 gtgtgtttggtttgcaaaacagtaagtgctggacagaacagta 41968099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 42510407 - 42510449
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||    
T  42510407 gtgtgtttgatttgcaaaacagtaagtactggacagaacagta 42510449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 51264377 - 51264419
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||| ||||||||| | ||||||||||||    
T  51264377 gtgtgtttggtttgcaaatcagcaagtattggacagaacagta 51264419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 498
Target Start/End: Complemental strand, 45491168 - 45491128
Alignment:
Q  458 tgtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||| ||||||||||||| |||| |||||||||    
T  45491168 tgtgtgtttggtatgcaaaacagcaattactggacagaaca 45491128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 459 - 502
Target Start/End: Complemental strand, 37004086 - 37004043
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37004086 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 37004043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 2085941 - 2085987
Alignment:
Q  455 ttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  2085941 ttgtatgtgtttggtttgcaaaacagcaagtactggacagaacagta 2085987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 9717114 - 9717156
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  9717114 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 9717156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 18685709 - 18685751
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  18685709 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 18685751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 502
Target Start/End: Complemental strand, 30798703 - 30798661
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  30798703 tgtgtttggtttgcaaaacagcaagtactggacagaacagtat 30798661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 35114658 - 35114700
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  35114658 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 35114700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 44284510 - 44284552
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  44284510 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 44284552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 33366483 - 33366522
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  33366483 gtgtgtttggtttgcaaaacagcaagtactggacagaaca 33366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 4641389 - 4641431
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  4641389 gtgtgtttgctttgcaaaacagcaagtactggacagaacagta 4641431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 5279051 - 5279009
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  5279051 gtgtgtttggtttgcaaaacagtaagtacttgacagaacagta 5279009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 17540588 - 17540630
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  17540588 tgtgtttggtttgcaaaacagcaagtactggatagaacagtat 17540630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 30326548 - 30326506
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  30326548 gtgtgtttggtttgcaaaagagcaagtactggacagaacagta 30326506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 33889131 - 33889173
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  33889131 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 33889173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 34338683 - 34338725
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  34338683 gtgtgtttggtttgcaaaacaacaagtactggacagaacagta 34338725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 37308529 - 37308571
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  37308529 gtgtgtttggtttgcaaaacaacaagtactggacagaacagta 37308571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Complemental strand, 2645303 - 2645260
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    ||||||||||||||||||||| |||||||| || ||||||||||    
T  2645303 gtgtgtttggtttgcaaaacaacaagtacttgatagaacagtat 2645260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 32497788 - 32497827
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  32497788 gtgtgtttggtttgcaaaacagtaagtactggacagaaca 32497827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 502
Target Start/End: Complemental strand, 9733138 - 9733104
Alignment:
Q  468 gtttgcaaaacagcaagtactagacagaacagtat 502  Q
    ||||||||||||||||||||| |||||||||||||    
T  9733138 gtttgcaaaacagcaagtactggacagaacagtat 9733104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 38993287 - 38993245
Alignment:
Q  456 tgtgtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||| || ||||||| |||||||||    
T  38993287 tgtgtgtgtttggtttgcaaaatagtaagtactggacagaaca 38993245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 500
Target Start/End: Complemental strand, 16178097 - 16178056
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagt 500  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  16178097 gtgtgattggtttgcaaaacagtaagtactggacagaacagt 16178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 500
Target Start/End: Original strand, 26418796 - 26418837
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagt 500  Q
    |||||||||||||||||||||| ||||| | |||||||||||    
T  26418796 gtgtgtttggtttgcaaaacagtaagtatttgacagaacagt 26418837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 43640975 - 43641017
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43640975 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 43641017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 502
Target Start/End: Complemental strand, 49152309 - 49152266
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  49152309 gtgtgtttggtttgcaaaacagcaagtactggacagaacagtat 49152266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 12600762 - 12600804
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  12600762 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 12600804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 23521756 - 23521798
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  23521756 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 23521798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 24002214 - 24002256
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  24002214 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 24002256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 36885822 - 36885864
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  36885822 gtgtgtttggtttgcaaaacagcgagtactagacagaacagta 36885864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 33553036 - 33552995
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  33553036 tgtgtttggtttgcaaaacagcaagtactggacagaacagta 33552995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 42869859 - 42869900
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  42869859 tgtgtttggtttgcaaaacagcaagtactcgacagaacagta 42869900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 498
Target Start/End: Complemental strand, 2725327 - 2725288
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  2725327 gtgtgtttggtttgcaaaacagcaagtactggacagaaca 2725288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 501
Target Start/End: Complemental strand, 20802746 - 20802699
Alignment:
Q  454 tttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||    
T  20802746 tttgggtgtgtttggtttgcaaaacagcaagtactgaacagaacagta 20802699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 21579902 - 21579945
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  21579902 gtgtgtttggtttgcaaaacagtaagtactggacagaacagtat 21579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 56154497 - 56154540
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  56154497 gtgtgtttggtttgcaaaacaacaagtactggacagaacagtat 56154540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 9512550 - 9512508
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  9512550 gtgtgtttggtttgcaaaacagcaagtacgtgacagaacagta 9512508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 29616061 - 29616103
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  29616061 gtgtgtttggtttgcaaaatagcaagtacttgacagaacagta 29616103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 52319202 - 52319244
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  52319202 gtgtgtttggtttgcaaaacagcaagtactggacataacagta 52319244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 459 - 500
Target Start/End: Complemental strand, 38486462 - 38486421
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagt 500  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  38486462 gtgtgtttcgtttgcaaaacagtaagtactagacagaacagt 38486421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 501
Target Start/End: Original strand, 38812415 - 38812458
Alignment:
Q  458 tgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||||||||  |||| |||||||    
T  38812415 tgtgtgtttggtttgcaaaacagcaagtaccggacaaaacagta 38812458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 502
Target Start/End: Complemental strand, 55065538 - 55065499
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  55065538 gtttggtttgcaaaacagcaagtactggacataacagtat 55065499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 2786841 - 2786883
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| |||| |||||||    
T  2786841 gtgtgtttggtttgcaaaacagtaagtactggacataacagta 2786883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 9807033 - 9807075
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| || ||||||| ||||||||||||    
T  9807033 gtgtgtttggtttgcaaaatagtaagtactggacagaacagta 9807075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 36497112 - 36497150
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  36497112 gtttggtttgcaaaacagcaagtactggacataacagta 36497150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 46680700 - 46680658
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| || ||||||| ||||||||||||    
T  46680700 gtgtgtttggtttgcaaaatagtaagtactggacagaacagta 46680658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 496
Target Start/End: Original strand, 28115157 - 28115190
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaa 496  Q
    |||||||||||||||||| |||||||||||||||    
T  28115157 gtttggtttgcaaaacagtaagtactagacagaa 28115190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 37931798 - 37931839
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||| ||||||| |||| |||||||    
T  37931798 tgtgtttggtttgcaaaacagtaagtactggacataacagta 37931839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 459 - 499
Target Start/End: Complemental strand, 50728088 - 50728048
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacag 499  Q
    |||||||||||||||||||||  ||||||| ||||||||||    
T  50728088 gtgtgtttggtttgcaaaacaataagtactggacagaacag 50728048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 459 - 499
Target Start/End: Complemental strand, 50736102 - 50736062
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacag 499  Q
    |||||||||||||||||||||  ||||||| ||||||||||    
T  50736102 gtgtgtttggtttgcaaaacaataagtactggacagaacag 50736062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 2561 - 2519
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  2561 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 2519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 51312 - 51354
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  51312 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 51354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 4052370 - 4052412
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  4052370 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 4052412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 14005261 - 14005219
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  14005261 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 14005219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 32020233 - 32020191
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  32020233 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 32020191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 32303817 - 32303775
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  32303817 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 32303775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 955168 - 955126
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  955168 gtgtgtttggtttacaaaacagcaagtacttgacagaacagta 955126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 6386449 - 6386491
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  6386449 gtgtgtttggtttgcaaaacaacaagtactggacagaacagta 6386491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 8673287 - 8673245
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  8673287 gtgtgtttggtttgcaaaacagcaagtactggacaaaacagta 8673245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 34063001 - 34063043
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  34063001 gtgtgtttggtttgcaaaaccgcaagtactggacagaacagta 34063043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 45446328 - 45446370
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  45446328 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 45446370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 37664499 - 37664458
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  37664499 tgtgtttggtttgcaaaacagcaagcactggacagaacagta 37664458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 13407168 - 13407125
Alignment:
Q  458 tgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||    
T  13407168 tgtgtgtttggtttacaaaacagtaagtactggacagaacagta 13407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 501
Target Start/End: Original strand, 17805562 - 17805605
Alignment:
Q  458 tgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||    
T  17805562 tgtgtgtttggtttgcaaaacagtaagtacttgacaaaacagta 17805605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 31731937 - 31731980
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||    
T  31731937 gtgtgtttggtttgcaaaacagtaagtactggacagaaaagtat 31731980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 41709650 - 41709689
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  41709650 gtgtgtttggtttgcaaaacagtaagtactggacagaaca 41709689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 15001344 - 15001382
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  15001344 gtttggtttgcaaaacagtaagtactggacagaacagta 15001382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 27103832 - 27103874
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||    
T  27103832 gtgtgtttgatttgcaaaacaacaagtactggacagaacagta 27103874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 29563458 - 29563416
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||| |  |||||||||||    
T  29563458 gtgtgtttggtttgcaaaacagcaagtattgaacagaacagta 29563416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 37861769 - 37861811
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||    
T  37861769 gtgtgtttgatttgcaaaacagtaagtactggacagaacagta 37861811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 45113929 - 45113971
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| |||| |||||||    
T  45113929 gtgtgtttggtttgcaaaacagtaagtactggacataacagta 45113971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 498
Target Start/End: Original strand, 21272588 - 21272625
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||||||| | |||||||||    
T  21272588 gtgtttggtttgcaaaacagcaagtattggacagaaca 21272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 35225537 - 35225578
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||    
T  35225537 tgtgtttggtttgcaaaacagtaagtactggacagaatagta 35225578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 459 - 499
Target Start/End: Original strand, 17520470 - 17520510
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacag 499  Q
    ||||| |||||||||||||||| ||||||| ||||||||||    
T  17520470 gtgtggttggtttgcaaaacagtaagtactggacagaacag 17520510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 502
Target Start/End: Original strand, 34101376 - 34101424
Alignment:
Q  454 tttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||| ||||||||||||||||||| || ||||||| |||| ||||||||    
T  34101376 tttgggtgtgtttggtttgcaaaaaagtaagtactggacaaaacagtat 34101424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 3922921 - 3922879
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  3922921 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 3922879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 32873987 - 32873945
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  32873987 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 32873945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 501
Target Start/End: Original strand, 18470563 - 18470603
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  18470563 gtgtttggtttgcaaaacagcaagtactggacagaacagta 18470603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 30849465 - 30849422
Alignment:
Q  458 tgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||    
T  30849465 tgtgtgtttggtttgcaaaacagtaagtacttgacagaacagta 30849422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 10932775 - 10932733
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  10932775 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 10932733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 16962989 - 16963031
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  16962989 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 16963031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 36769787 - 36769745
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  36769787 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 36769745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 40753047 - 40753089
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  40753047 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 40753089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 43158903 - 43158862
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||||| ||| |||||    
T  43158903 tgtgtttggtttgcaaaacagcaagtactagatagagcagta 43158862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 499
Target Start/End: Complemental strand, 26994443 - 26994403
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacag 499  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  26994443 gtgtgtttggtttgcaaaacagaaagtactggacagaacag 26994403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 461 - 501
Target Start/End: Complemental strand, 41211417 - 41211377
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  41211417 gtgtttggtttgcaaaacagcaagtactggacaaaacagta 41211377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Complemental strand, 3892244 - 3892201
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||    
T  3892244 gtgtatttggtttgcaaaacagtaagtactggacagaacagtat 3892201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Complemental strand, 43189461 - 43189418
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||    
T  43189461 gtgtgtttggtttgcaaaacagtaagtactggacataacagtat 43189418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 46408768 - 46408815
Alignment:
Q  454 tttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||| |||||||||||||||||||||||||||| | || |||||||||    
T  46408768 tttgggtgtgtttggtttgcaaaacagcaagtattggatagaacagta 46408815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 329352 - 329390
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  329352 gtttggtttgcaaaacagtaagtactggacagaacagta 329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 9913403 - 9913445
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||| ||||  |||||||||||    
T  9913403 gtgtgtttggtttgcaaaacagcaaatactgtacagaacagta 9913445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 9927091 - 9927133
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||| ||||  |||||||||||    
T  9927091 gtgtgtttggtttgcaaaacagcaaatactgtacagaacagta 9927133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 12982180 - 12982222
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| |||||||||| || |||||||||    
T  12982180 gtgtgtttggtttgcaaaagagcaagtactggagagaacagta 12982222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 30599226 - 30599184
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||    
T  30599226 gtgtgtttggtttacaaaacagtaagtactggacagaacagta 30599184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 34117350 - 34117392
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| |||| |||||||    
T  34117350 gtgtgtttggtttgcaaaacagtaagtactggacataacagta 34117392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 497
Target Start/End: Complemental strand, 47316901 - 47316863
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaac 497  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  47316901 gtgtgtttggtttgcaaaacagtaagtactggacagaac 47316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 47947637 - 47947679
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| | |||||||||||||||||| ||||||||||||    
T  47947637 gtgtgtttgctctgcaaaacagcaagtactggacagaacagta 47947679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 47953067 - 47953109
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| | |||||||||||||||||| ||||||||||||    
T  47953067 gtgtgtttgctctgcaaaacagcaagtactggacagaacagta 47953109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 21784749 - 21784790
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||| ||||||| |||| |||||||    
T  21784749 tgtgtttggtttgcaaaacagtaagtactggacaaaacagta 21784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 501
Target Start/End: Original strand, 47442731 - 47442771
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  47442731 gtgtttggtttgcaaaacagcaagtattggacaaaacagta 47442771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 15277193 - 15277151
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  15277193 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 15277151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 501
Target Start/End: Complemental strand, 4494352 - 4494312
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  4494352 gtgtttggtttgcaaaacagtaagtactagacagaacagta 4494312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 501
Target Start/End: Original strand, 11279011 - 11279054
Alignment:
Q  458 tgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  11279011 tgtgtgtttggtttgcaaaacagcaagtactggatagaacagta 11279054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 24203231 - 24203278
Alignment:
Q  454 tttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||||    
T  24203231 tttgagtgtgtttggtttgcaaaacagcaagtattggacagaacagta 24203278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 501
Target Start/End: Original strand, 24242540 - 24242579
Alignment:
Q  462 tgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  24242540 tgtttggtttgcaaaacagcaagtactggacagaacagta 24242579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 11614032 - 11613990
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  11614032 gtgtgtttggtttgcaaaacagcaagtattggacagaacagta 11613990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 17867712 - 17867750
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  17867712 gtttggtttgcaaaacagcaagtactggacagaacagta 17867750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 17877495 - 17877533
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  17877495 gtttggtttgcaaaacagcaagtactggacagaacagta 17877533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 28502332 - 28502374
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  28502332 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 28502374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 29814738 - 29814780
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  29814738 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 29814780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 32805351 - 32805393
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  32805351 gtgtgtttggtttgcaaaacagcaagtactggacataacagta 32805393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 11212131 - 11212172
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  11212131 tgtgtttggtttgcaaaacagcaagtattggacagaacagta 11212172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 2614769 - 2614812
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||    
T  2614769 gtgtgtttggtttgcaaaacaacaagtactggacaaaacagtat 2614812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 3259551 - 3259593
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||| | | ||||||||||||    
T  3259551 gtgtgtttggtttgcaaaacagcaaggattggacagaacagta 3259593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 10959874 - 10959916
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| || |||||||||    
T  10959874 gtgtgtttggtttgcaaaacagtaagtactggatagaacagta 10959916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 17443136 - 17443178
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||| || | ||||||||||||    
T  17443136 gtgtgtttggtttgcaaaacagcaaatattggacagaacagta 17443178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 2351553 - 2351595
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  2351553 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 2351595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 4818363 - 4818321
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  4818363 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 4818321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 35701150 - 35701192
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  35701150 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 35701192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 501
Target Start/End: Original strand, 11963216 - 11963256
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  11963216 gtgtttggtttgcaaaacagcaagtactggacagaacagta 11963256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 29241261 - 29241308
Alignment:
Q  454 tttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  29241261 tttgggtgtgcttggtttgcaaaacagcaagtactggacagaacagta 29241308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 7208438 - 7208396
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  7208438 gtgtgtttggtttgcaaaacaacaagtactggacagaacagta 7208396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 24181832 - 24181790
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  24181832 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 24181790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 20119639 - 20119686
Alignment:
Q  454 tttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||| |||||||||||||||||||||| ||||| | ||||||||||||    
T  20119639 tttgggtgtgtttggtttgcaaaacagtaagtattggacagaacagta 20119686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Complemental strand, 21739379 - 21739340
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  21739379 gtgtgtttggtttgcaaaacagcaagtactggacataaca 21739340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 40182337 - 40182376
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  40182337 gtgtgtttggtttccaaaacagcaagtactggacagaaca 40182376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Complemental strand, 41790685 - 41790642
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||    
T  41790685 gtgtgtttggtttacaaaacagtaagtactggacagaacagtat 41790642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 548221 - 548263
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||  ||||||| ||||||||||||    
T  548221 gtgtgtttggtttgcaaaacattaagtactggacagaacagta 548263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 7523044 - 7523086
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||| | ||||||||||||    
T  7523044 gtgtgtttggtttgcaaaacaggaagtattggacagaacagta 7523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 7726031 - 7725989
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| |||||||||||| |||||||||||| |||||||    
T  7726031 gtgtgtttgatttgcaaaacagtaagtactagacataacagta 7725989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 31880284 - 31880242
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||    
T  31880284 gtgtgtttgatttgcaaaacagtaagtactggacagaacagta 31880242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 5673018 - 5673059
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||| |||||||| ||||||| ||||||||||||    
T  5673018 tgtgtttggtttacaaaacagtaagtacttgacagaacagta 5673059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Complemental strand, 22432518 - 22432473
Alignment:
Q  454 tttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacag 499  Q
    |||| ||| |||||||||| ||||||| ||||||||||||||||||    
T  22432518 tttgggtgcgtttggtttgtaaaacagtaagtactagacagaacag 22432473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 497
Target Start/End: Original strand, 2134944 - 2134982
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaac 497  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2134944 gtgtgtttggtttgcaaaacagcaagtactagacagaac 2134982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 29584749 - 29584791
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  29584749 gtgtgtttggtttgcaaaacagcaagtactggacagaacagta 29584791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 21221570 - 21221529
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  21221570 tgtgtttggtttgcaatacagcaagtactagacagaacagta 21221529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 34026551 - 34026598
Alignment:
Q  454 tttgtgtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  34026551 tttgggtgtgtttggtttgcaaaacagtaagtactggacagaacagta 34026598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 498
Target Start/End: Complemental strand, 47958643 - 47958604
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  47958643 gtgtgtttggtttgcaaaacagcaagtactggacagaaca 47958604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 5442165 - 5442207
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  5442165 gtgtgtttggtttgcaaaatagcaagtactggacagaacagta 5442207  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 20254949 - 20254991
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  20254949 gtgtgtttggtttgcaaaacagcaagtactggacataacagta 20254991  T

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Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 20609844 - 20609802
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  20609844 gtgtgtttggtttgcaaaacagtaagtactggacagaacagta 20609802  T

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Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 26282598 - 26282556
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  26282598 gtgtgtttggtttgcaaaacagcaagtactggatagaacagta 26282556  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 497
Target Start/End: Original strand, 40083195 - 40083233
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaac 497  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  40083195 gtgtgtttggcttgcaaaacagcaagtactagacagaac 40083233  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 43175443 - 43175485
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  43175443 gtgtgtttggtttgcaaaacagcaagtactggacaaaacagta 43175485  T

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Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 44116829 - 44116870
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  44116829 tgtgtttggtttgcaaaacagcaagtactggatagaacagta 44116870  T

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Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 461 - 501
Target Start/End: Complemental strand, 42636597 - 42636557
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  42636597 gtgtttggtttgcaaaacaacaagtactagacagaatagta 42636557  T

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Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Complemental strand, 22484953 - 22484910
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||    
T  22484953 gtgtgtttggtttgcaaaacagtaagtactggacataacagtat 22484910  T

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Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Complemental strand, 53558006 - 53557967
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaaca 498  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  53558006 gtgtgtttggtttgcaaaacagtaagtacttgacagaaca 53557967  T

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Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 1344918 - 1344876
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||| |||||||||| |||| |||||||    
T  1344918 gtgtgtttggtttgcaaaatagcaagtactggacaaaacagta 1344876  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 4851667 - 4851625
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||  |||| |||||||    
T  4851667 gtgtgtttggtttgcaaaacagcaagtaccggacaaaacagta 4851625  T

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Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 28675664 - 28675706
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||  ||||||| ||||||||||||    
T  28675664 gtgtgtttggtttgcaaaacaataagtactggacagaacagta 28675706  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 51259991 - 51259949
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||| ||||||| || |||||||||    
T  51259991 gtgtgtttggtttgcaaaacagtaagtactggatagaacagta 51259949  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 501
Target Start/End: Complemental strand, 3864883 - 3864843
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||| |||||||  |||||||||||    
T  3864883 gtgtttggtttgcaaaacagtaagtactgcacagaacagta 3864843  T

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Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 101822 - 101865
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagtat 502  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  101822 gtgtgtttggtttgcaaaacagcaagtaccggacagaacagtat 101865  T

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Target: scaffold0169 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 12759 - 12717
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  12759 gtgtgtttggtttgcaaaacagcaagtactggatagaacagta 12717  T

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Target: scaffold0169; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 18277 - 18235
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  18277 gtgtgtttggtttgcaaaacagcaagtactggatagaacagta 18235  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 23450 - 23492
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  23450 gtgtgtttggtttgcaaaacagcaaatactggacagaacagta 23492  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 338760 - 338802
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  338760 gtgtgtttggtttgcaaaacagcaagtactggacataacagta 338802  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 373171 - 373130
Alignment:
Q  460 tgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  373171 tgtgtttggtttgcaaaacagcaagtactgaacagaacagta 373130  T

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Target: scaffold0360 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 15585 - 15543
Alignment:
Q  459 gtgtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||    
T  15585 gtgtgtttggtttgtaaaacagtaagtactggacagaacagta 15543  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 501
Target Start/End: Complemental strand, 43167 - 43129
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  43167 gtttggtttgcaaaacagtaagtactagacagagcagta 43129  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 501
Target Start/End: Complemental strand, 5658 - 5620
Alignment:
Q  463 gtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  5658 gtttggtttgcaaaacagcaagtactggacataacagta 5620  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 501
Target Start/End: Original strand, 15047 - 15087
Alignment:
Q  461 gtgtttggtttgcaaaacagcaagtactagacagaacagta 501  Q
    |||||||||||||||||||| ||||||  ||||||||||||    
T  15047 gtgtttggtttgcaaaacagtaagtaccggacagaacagta 15087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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